BB910753 ( RCE09764 )

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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
           RepID=UPI0000163E03
          Length = 824

 Score =  329 bits (844), Expect = 8e-89
 Identities = 157/191 (82%), Positives = 173/191 (90%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
           FVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDD
Sbjct: 329 FVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDD 388

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD 
Sbjct: 389 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 448

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
           G++QAPLD +AIFSSLYWLTP K KFH  Q+AS + G VDV+EEL+LNVNVALMELYLHN
Sbjct: 449 GIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELYLHN 508

Query: 543 DPKEFQRVRSF 575
           DP+EF RVR F
Sbjct: 509 DPREFSRVRDF 519

[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  329 bits (844), Expect = 8e-89
 Identities = 157/191 (82%), Positives = 173/191 (90%)
 Frame = +3

Query: 3    FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
            FVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDD
Sbjct: 1769 FVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDD 1828

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD 
Sbjct: 1829 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 1888

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            G++QAPLD +AIFSSLYWLTP K KFH  Q+AS + G VDV+EEL+LNVNVALMELYLHN
Sbjct: 1889 GIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELYLHN 1948

Query: 543  DPKEFQRVRSF 575
            DP+EF RVR F
Sbjct: 1949 DPREFSRVRDF 1959

[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  327 bits (837), Expect = 5e-88
 Identities = 159/191 (83%), Positives = 172/191 (90%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
           FVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDD
Sbjct: 329 FVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDD 388

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD 
Sbjct: 389 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 448

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
           G++QAPLD +AIFSSLYWLTP K KFH  QK S + GEVDVIEEL+LNVNVALMELYLHN
Sbjct: 449 GIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHN 508

Query: 543 DPKEFQRVRSF 575
           D  EFQRVR F
Sbjct: 509 DVAEFQRVRGF 519

[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  327 bits (837), Expect = 5e-88
 Identities = 159/191 (83%), Positives = 172/191 (90%)
 Frame = +3

Query: 3    FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
            FVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDD
Sbjct: 1771 FVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDD 1830

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD 
Sbjct: 1831 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 1890

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            G++QAPLD +AIFSSLYWLTP K KFH  QK S + GEVDVIEEL+LNVNVALMELYLHN
Sbjct: 1891 GIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHN 1950

Query: 543  DPKEFQRVRSF 575
            D  EFQRVR F
Sbjct: 1951 DVAEFQRVRGF 1961

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI00017F0C90
          Length = 826

 Score =  281 bits (720), Expect = 2e-74
 Identities = 139/191 (72%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 185
           VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK  F   VCL+VYGDDN
Sbjct: 328 VGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDN 387

Query: 186 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDT 362
           LISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE+KPF ELDFLKRKF +  + 
Sbjct: 388 LISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEH 447

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
           G + APLD +AIFS L+WLTP K KF   +KA  Y GEVDV+EEL++NVNV+L+ELYLHN
Sbjct: 448 GQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHN 507

Query: 543 DPKEFQRVRSF 575
           D +EF RVRSF
Sbjct: 508 DKEEFNRVRSF 518

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  281 bits (720), Expect = 2e-74
 Identities = 139/191 (72%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6    VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 185
            VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK  F   VCL+VYGDDN
Sbjct: 1754 VGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDN 1813

Query: 186  LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDT 362
            LISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE+KPF ELDFLKRKF +  + 
Sbjct: 1814 LISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEH 1873

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            G + APLD +AIFS L+WLTP K KF   +KA  Y GEVDV+EEL++NVNV+L+ELYLHN
Sbjct: 1874 GQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHN 1933

Query: 543  DPKEFQRVRSF 575
            D +EF RVRSF
Sbjct: 1934 DKEEFNRVRSF 1944

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI00003FE52F
          Length = 846

 Score =  212 bits (540), Expect = 1e-53
 Identities = 111/189 (58%), Positives = 135/189 (71%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
           GQ+V +V  GLPSGFALTVV+NSVFNEIL+RY ++ L   P++  F   V L+VYGDDNL
Sbjct: 339 GQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNL 398

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
           +S     A +FNGE I+ TL +K V ITDGSDK AP I+ K   ELDFLKR+FLKL+TGV
Sbjct: 399 MSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGV 458

Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
           +QAPLD+TAIFS L+W+TP   K        Q    VD + EL LNV VAL ELYLH + 
Sbjct: 459 VQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNK 517

Query: 549 KEFQRVRSF 575
           +EFQRVR+F
Sbjct: 518 EEFQRVRNF 526

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  212 bits (540), Expect = 1e-53
 Identities = 111/189 (58%), Positives = 135/189 (71%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            GQ+V +V  GLPSGFALTVV+NSVFNEIL+RY ++ L   P++  F   V L+VYGDDNL
Sbjct: 1829 GQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNL 1888

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            +S     A +FNGE I+ TL +K V ITDGSDK AP I+ K   ELDFLKR+FLKL+TGV
Sbjct: 1889 MSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGV 1948

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            +QAPLD+TAIFS L+W+TP   K        Q    VD + EL LNV VAL ELYLH + 
Sbjct: 1949 VQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNK 2007

Query: 549  KEFQRVRSF 575
            +EFQRVR+F
Sbjct: 2008 EEFQRVRNF 2016

[9][TOP]
>UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA9_9SECO
          Length = 985

 Score =  189 bits (480), Expect = 1e-46
 Identities = 98/189 (51%), Positives = 125/189 (66%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F Q VCLIVYGDDNL
Sbjct: 606  GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRVTVPRPLVNNFNQEVCLIVYGDDNL 665

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            ISV P    +FNG+ I+  LA+ KV ITDGSDK++P + +KP  +LDFLKR F     G 
Sbjct: 666  ISVKPDTMKYFNGDRIKEVLAKFKVTITDGSDKNSPVLRAKPLKQLDFLKRGFKVQSDGR 725

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            + APLD+ AIFSSLY++ P                + + +  L LN  VAL ELYLHND 
Sbjct: 726  VLAPLDLQAIFSSLYYINP----------------QGNTLNSLFLNAQVALRELYLHNDI 769

Query: 549  KEFQRVRSF 575
            ++F  VR+F
Sbjct: 770  EQFTAVRNF 778

[10][TOP]
>UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus
           RepID=UPI00003FE53F
          Length = 711

 Score =  189 bits (479), Expect = 2e-46
 Identities = 96/189 (50%), Positives = 127/189 (67%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
           GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNL
Sbjct: 332 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 391

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
           IS+ P    +FNGE I+  LA+ KV ITDGSDK++P + +KP  +LDFLKR F     G 
Sbjct: 392 ISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 451

Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
           + APLD+ AI+SSLY++ P                + ++++ L LN  VAL ELYLH D 
Sbjct: 452 VLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELYLHGDV 495

Query: 549 KEFQRVRSF 575
           ++F  VR+F
Sbjct: 496 EQFTAVRNF 504

[11][TOP]
>UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA7_9SECO
          Length = 985

 Score =  189 bits (479), Expect = 2e-46
 Identities = 96/189 (50%), Positives = 127/189 (67%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNL
Sbjct: 606  GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 665

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            IS+ P    +FNGE I+  LA+ KV ITDGSDK++P + +KP  +LDFLKR F     G 
Sbjct: 666  ISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 725

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            + APLD+ AI+SSLY++ P                + ++++ L LN  VAL ELYLH D 
Sbjct: 726  VLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELYLHGDV 769

Query: 549  KEFQRVRSF 575
            ++F  VR+F
Sbjct: 770  EQFTAVRNF 778

[12][TOP]
>UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE
            RASPBERRY) RepID=POL1_TORVR
          Length = 2197

 Score =  189 bits (479), Expect = 2e-46
 Identities = 96/189 (50%), Positives = 127/189 (67%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNL
Sbjct: 1818 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 1877

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            IS+ P    +FNGE I+  LA+ KV ITDGSDK++P + +KP  +LDFLKR F     G 
Sbjct: 1878 ISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 1937

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            + APLD+ AI+SSLY++ P                + ++++ L LN  VAL ELYLH D 
Sbjct: 1938 VLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELYLHGDV 1981

Query: 549  KEFQRVRSF 575
            ++F  VR+F
Sbjct: 1982 EQFTAVRNF 1990

[13][TOP]
>UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA8_9SECO
          Length = 985

 Score =  188 bits (477), Expect = 3e-46
 Identities = 96/189 (50%), Positives = 125/189 (66%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNL
Sbjct: 606  GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 665

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            IS+ P    +FNGE I+  LA  KV ITDGSDK++P + +KP  +LDFLKR F     G 
Sbjct: 666  ISIKPDTMKYFNGEQIKTILARYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 725

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            + APLD+ AI+SSLY++ P                + +++  L LN  VAL ELYLH D 
Sbjct: 726  VLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELYLHGDV 769

Query: 549  KEFQRVRSF 575
            ++F  VR+F
Sbjct: 770  EQFTAVRNF 778

[14][TOP]
>UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA6_9SECO
          Length = 985

 Score =  187 bits (476), Expect = 4e-46
 Identities = 96/189 (50%), Positives = 125/189 (66%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNL
Sbjct: 606  GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 665

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            IS+ P    +FNGE I+  LA  KV ITDGSDK++P + +KP  +LDFLKR F     G 
Sbjct: 666  ISIKPDTMKYFNGEQIKTILANIKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 725

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            + APLD+ AI+SSLY++ P                + +++  L LN  VAL ELYLH D 
Sbjct: 726  VLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELYLHGDV 769

Query: 549  KEFQRVRSF 575
            ++F  VR+F
Sbjct: 770  EQFTAVRNF 778

[15][TOP]
>UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot
           virus RepID=Q155U1_9SECO
          Length = 711

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/189 (48%), Positives = 125/189 (66%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
           GQ+V++V  G+PSG ALTV++NS+FNE+LI Y YR   P+     F+Q VCLIVYGDDNL
Sbjct: 332 GQRVYEVRAGMPSGCALTVIINSLFNELLIGYVYRVTVPRSLVNNFKQEVCLIVYGDDNL 391

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
           IS+ P    +FNGE I+ TLA+ ++ ITDGSDK++P + +KP  +LDFLKR F     G 
Sbjct: 392 ISIKPDTMKYFNGEQIKSTLAKYRITITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 451

Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
           + APLD+ AI+SSLY++ P                + +++  L LN  VAL ELYLH D 
Sbjct: 452 VLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELYLHGDV 495

Query: 549 KEFQRVRSF 575
           ++F  VR+F
Sbjct: 496 EQFTAVRNF 504

[16][TOP]
>UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud
            Blight RepID=POL1_TRSVB
          Length = 2304

 Score =  162 bits (410), Expect = 2e-38
 Identities = 93/187 (49%), Positives = 117/187 (62%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLIS 194
            +VF+V  G+  G ALTV++NSVFNEILIRY Y+ + P PE  RF+  V L+VYGDDNLI+
Sbjct: 1833 QVFEVRGGIRRG-ALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVYGDDNLIA 1891

Query: 195  VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQ 374
            V PS    F GE I+ TLA KK+ ITDGSDK +P +E+KP  +LDFLKR FL  D+G + 
Sbjct: 1892 VDPSMQKIFTGEVIKKTLARKKITITDGSDKLSPVLEAKPLAQLDFLKRSFLVSDSGQVM 1951

Query: 375  APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPKE 554
              LD T I+SSL +L                S + D I  L  NV  AL ELY   D +E
Sbjct: 1952 PALDRTCIYSSLLYLR---------------SADCDPIPLLHQNVQNALQELYYRQDREE 1996

Query: 555  FQRVRSF 575
            F  +R+F
Sbjct: 1997 FDNLRTF 2003

[17][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score =  161 bits (408), Expect = 3e-38
 Identities = 86/189 (45%), Positives = 115/189 (60%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+VYGDDNL
Sbjct: 1527 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFNEYVTLLVYGDDNL 1586

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            I+V PS    FNG+ I+ T+A+ +V ITDGSDK +PT+  KP   LDFLKR F   D G 
Sbjct: 1587 IAVDPSILEVFNGDVIKKTMAKWRVTITDGSDKLSPTLTEKPLLSLDFLKRGFKLADNGQ 1646

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            + APLD TAI+SSL+W+                    DV+  L  N   AL+E++ H D 
Sbjct: 1647 VYAPLDKTAIYSSLHWVAGRGQ---------------DVMSALKDNARSALIEMWAHQDK 1691

Query: 549  KEFQRVRSF 575
             EF  +RSF
Sbjct: 1692 AEFVELRSF 1700

[18][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score =  156 bits (394), Expect = 1e-36
 Identities = 86/189 (45%), Positives = 114/189 (60%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
           G +V++V  G+PSG ALTV++NS+FNE LIR+ +R       + RF Q V L++YGDDNL
Sbjct: 323 GARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNL 382

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
           I+V P     FNGE IR  LA+  V ITDGSDK A  IE KP  +LDFLKR+F KL+ G 
Sbjct: 383 IAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGT 442

Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
           + APLD+ ++++SL  +T      H                 L  NV+ AL+ELYLH + 
Sbjct: 443 VYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELYLHGNE 487

Query: 549 KEFQRVRSF 575
             F  +R F
Sbjct: 488 TWFNHLRDF 496

[19][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score =  156 bits (394), Expect = 1e-36
 Identities = 86/189 (45%), Positives = 114/189 (60%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G +V++V  G+PSG ALTV++NS+FNE LIR+ +R       + RF Q V L++YGDDNL
Sbjct: 1710 GARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNL 1769

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            I+V P     FNGE IR  LA+  V ITDGSDK A  IE KP  +LDFLKR+F KL+ G 
Sbjct: 1770 IAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGT 1829

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            + APLD+ ++++SL  +T      H                 L  NV+ AL+ELYLH + 
Sbjct: 1830 VYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELYLHGNE 1874

Query: 549  KEFQRVRSF 575
              F  +R F
Sbjct: 1875 TWFNHLRDF 1883

[20][TOP]
>UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus
            RepID=POL1_GFLV
          Length = 2284

 Score =  154 bits (390), Expect = 4e-36
 Identities = 81/189 (42%), Positives = 119/189 (62%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G +V+    G+PSG ALTVV+NS+F E+L+RY ++K+ P   K  F + V LI YGDDN+
Sbjct: 1782 GNQVYATEAGIPSGCALTVVLNSIFKELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNV 1841

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
             +VA S   +F G+A+++ +A+  V ITDG DK   TI ++P  EL+FLKR F++   G+
Sbjct: 1842 FTVAQSVMQYFTGDALKMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGGM 1901

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            I APL+  +I SSL ++                S   D++++L+ NVN AL+ELYLH D 
Sbjct: 1902 INAPLEKLSIMSSLVYIR---------------SDGSDMLQKLLDNVNTALVELYLHGDR 1946

Query: 549  KEFQRVRSF 575
              F+ VR+F
Sbjct: 1947 TYFESVRAF 1955

[21][TOP]
>UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus
           RepID=UPI00003FE537
          Length = 825

 Score =  152 bits (385), Expect = 1e-35
 Identities = 82/189 (43%), Positives = 118/189 (62%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
           G +V++   G+PSG ALTVV+NS+FNE+L+RY Y+K+ P   +  F + V LI YGDDN+
Sbjct: 322 GSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNV 381

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            +V+ S  + F G+A++  +A   V ITDG DK   TI ++P  EL+FLKR F K + G+
Sbjct: 382 FTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGL 441

Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
           I APL+  +I SSL ++                S   D++++LV NVN AL+ELYLH D 
Sbjct: 442 IYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELYLHQDR 486

Query: 549 KEFQRVRSF 575
           +  + VR F
Sbjct: 487 EYSESVRDF 495

[22][TOP]
>UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW
            RepID=POL1_ARMVN
          Length = 2284

 Score =  152 bits (385), Expect = 1e-35
 Identities = 82/189 (43%), Positives = 118/189 (62%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G +V++   G+PSG ALTVV+NS+FNE+L+RY Y+K+ P   +  F + V LI YGDDN+
Sbjct: 1781 GSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNV 1840

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
             +V+ S  + F G+A++  +A   V ITDG DK   TI ++P  EL+FLKR F K + G+
Sbjct: 1841 FTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGL 1900

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            I APL+  +I SSL ++                S   D++++LV NVN AL+ELYLH D 
Sbjct: 1901 IYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELYLHQDR 1945

Query: 549  KEFQRVRSF 575
            +  + VR F
Sbjct: 1946 EYSESVRDF 1954

[23][TOP]
>UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV
          Length = 2285

 Score =  150 bits (379), Expect = 7e-35
 Identities = 80/189 (42%), Positives = 117/189 (61%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G +V++   G+PSG ALTVV+NS+FNE+L+RY ++K+ P   +  F + V LI YGDDN+
Sbjct: 1783 GNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLITYGDDNV 1842

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
             +V+ S    F G+A++  +A   V ITDG DK   TI ++P  EL+FLKR   K + G+
Sbjct: 1843 FTVSQSIMESFTGDALKAEMANVGVTITDGKDKSLATIPARPLLELEFLKRGIKKGNGGM 1902

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
            I APL+  +I SSL ++                S   D++++LV NVN AL+EL+LH D 
Sbjct: 1903 IYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELFLHQDK 1947

Query: 549  KEFQRVRSF 575
            + F  VR+F
Sbjct: 1948 EYFDSVRNF 1956

[24][TOP]
>UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus
            RepID=O37086_9SECO
          Length = 2150

 Score =  138 bits (347), Expect = 3e-31
 Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G++V+ V  G+PSG ALTVV+NS+FNEILIRY YRK+ P P    F + V L+VYGDDNL
Sbjct: 1761 GRQVYMVRGGMPSGCALTVVINSIFNEILIRYVYRKVTPAPACNFFNKYVRLMVYGDDNL 1820

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            +++      +F+G  I+  +A   + ITDG+DK + T+E KP   L+FLKR F   + G+
Sbjct: 1821 LTIKEEVIPFFDGPVIKREMASVGITITDGTDKSSLTLERKPLASLEFLKRGFRVQENGL 1880

Query: 369  IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-ND 545
            + APLD T++++ L++L  +   F     +               NV   L E+ LH N 
Sbjct: 1881 VVAPLDKTSMYTRLFYLPLALMAFIPGYFSKG-------------NVKSFLEEIVLHPNH 1927

Query: 546  PKEFQRVRSF 575
             +EF RVR+F
Sbjct: 1928 RREFYRVRNF 1937

[25][TOP]
>UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO
          Length = 1858

 Score =  134 bits (337), Expect = 5e-30
 Identities = 75/190 (39%), Positives = 115/190 (60%), Gaps = 5/190 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 179
            +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V L+ YGD
Sbjct: 1479 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGD 1538

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
            DNLISV+   A+ FNG  ++  +A+  V ITDG DK +PT+E +     DFLKR F KL+
Sbjct: 1539 DNLISVSHVVANVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLN 1597

Query: 360  TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
              V  +P + +++++ L+++  +                +D  E  ++N+N  L ELY+H
Sbjct: 1598 GLVYDSPEEKSSLWAQLHYVNTT---------------SLDKQEAYLVNLNNVLKELYMH 1642

Query: 540  NDPKEFQRVR 569
            + P+E   +R
Sbjct: 1643 S-PEEMNMIR 1651

[26][TOP]
>UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus
           RepID=UPI0000163D09
          Length = 711

 Score =  132 bits (331), Expect = 2e-29
 Identities = 74/190 (38%), Positives = 115/190 (60%), Gaps = 5/190 (2%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 179
           +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V L+ YGD
Sbjct: 332 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGD 391

Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
           DNLISV+   AS FNG  ++  +A+  V ITDG DK +PT+E +     DFLKR F KL+
Sbjct: 392 DNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLN 450

Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
             +  +P + +++++ L+++  +                +D  E  ++N+N  L ELY++
Sbjct: 451 GLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNVLKELYMY 495

Query: 540 NDPKEFQRVR 569
           + P+E   +R
Sbjct: 496 S-PEEMNMLR 504

[27][TOP]
>UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO
          Length = 1858

 Score =  132 bits (331), Expect = 2e-29
 Identities = 74/190 (38%), Positives = 115/190 (60%), Gaps = 5/190 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 179
            +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V L+ YGD
Sbjct: 1479 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGD 1538

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
            DNLISV+   AS FNG  ++  +A+  V ITDG DK +PT+E +     DFLKR F KL+
Sbjct: 1539 DNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLN 1597

Query: 360  TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
              +  +P + +++++ L+++  +                +D  E  ++N+N  L ELY++
Sbjct: 1598 GLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNVLKELYMY 1642

Query: 540  NDPKEFQRVR 569
            + P+E   +R
Sbjct: 1643 S-PEEMNMLR 1651

[28][TOP]
>UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO
          Length = 2366

 Score =  127 bits (320), Expect = 5e-28
 Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L P  E+  F   V LIVYGDDN+
Sbjct: 1886 GSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPDIERPFFSNNVVLIVYGDDNV 1945

Query: 189  ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWELDFLKRKFLK-LDT 362
            + + P+  S FNG  I+  + E+  +KITDG+DK +P I+++P  + +FLKR + K    
Sbjct: 1946 LGIHPNIESVFNGNTIKAYMKEELGIKITDGADKLSPVIDARPLEQCEFLKRTWRKDRQY 2005

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            G+ +APL  T+IFS L ++           +   Y  +  +++    NV  +L E  LH 
Sbjct: 2006 GLYRAPLVETSIFSCLRYV-----------RLQNYDWQAPLLQ----NVQGSLYEASLHG 2050

Query: 543  DPKEFQRV 566
             P+   R+
Sbjct: 2051 -PEMHDRI 2057

[29][TOP]
>UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain
            cherry RepID=POL1_RRVC
          Length = 2367

 Score =  126 bits (316), Expect = 1e-27
 Identities = 67/139 (48%), Positives = 96/139 (69%), Gaps = 2/139 (1%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L P+ E+  F   V LIVYGDDN+
Sbjct: 1887 GSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVVLIVYGDDNV 1946

Query: 189  ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWELDFLKRKFLK-LDT 362
            + + P+  S FNG AI+  + E+  +KITDG+DK +P I ++P  + +FLKR + K    
Sbjct: 1947 LGIHPNIESAFNGNAIKAYMKEELGIKITDGADKLSPVICARPLEQCEFLKRTWRKDRQY 2006

Query: 363  GVIQAPLDMTAIFSSLYWL 419
            G+ +APL  T+I+S L ++
Sbjct: 2007 GLYRAPLVETSIYSCLRYV 2025

[30][TOP]
>UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring
           virus RepID=B4ZF31_9SECO
          Length = 73

 Score =  125 bits (313), Expect = 3e-27
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = +3

Query: 45  SGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFN 224
           SGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF 
Sbjct: 1   SGFALTVVVNSVFNEILIRYAYKKLAPVPERNRFGSTVCLLVYGDDNLISVSPSIASWFT 60

Query: 225 GEAIRVTLAEKK 260
           GEAIR+TLAEKK
Sbjct: 61  GEAIRITLAEKK 72

[31][TOP]
>UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus
           RepID=UPI0000163CF4
          Length = 710

 Score =  124 bits (310), Expect = 7e-27
 Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
           +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  + L VYGDD
Sbjct: 332 IWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDD 391

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLKR F ++  
Sbjct: 392 NLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSN 451

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            +  AP D  +++S L++++                  +++ E  ++N+   L ELYLH+
Sbjct: 452 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 496

Query: 543 DPKEFQRVR 569
            P+E +R+R
Sbjct: 497 -PEEARRLR 504

[32][TOP]
>UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain
            Kentucky G7) RepID=POL1_BPMV
          Length = 1850

 Score =  124 bits (310), Expect = 7e-27
 Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  + L VYGDD
Sbjct: 1472 IWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDD 1531

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLKR F ++  
Sbjct: 1532 NLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSN 1591

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
             +  AP D  +++S L++++                  +++ E  ++N+   L ELYLH+
Sbjct: 1592 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1636

Query: 543  DPKEFQRVR 569
             P+E +R+R
Sbjct: 1637 -PEEARRLR 1644

[33][TOP]
>UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO
          Length = 1851

 Score =  123 bits (308), Expect = 1e-26
 Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
 Frame = +3

Query: 12   QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYG 176
            + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  + L VYG
Sbjct: 1471 KNVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYG 1530

Query: 177  DDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKL 356
            DDNLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLKR F ++
Sbjct: 1531 DDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQM 1590

Query: 357  DTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
               +  AP D  +++S L++++                  +++ E  ++N+   L ELYL
Sbjct: 1591 SNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYL 1635

Query: 537  HNDPKEFQRVR 569
            H+ P+E +++R
Sbjct: 1636 HS-PEEARQLR 1645

[34][TOP]
>UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO
          Length = 1851

 Score =  121 bits (303), Expect = 4e-26
 Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  V L VYGDD
Sbjct: 1473 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDD 1532

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV      +F+G  ++  LA   + ITDG DK + T++ +   + DFLKR F ++  
Sbjct: 1533 NLISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSN 1592

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
             +  AP D  +++S L++++                  +++ E  ++N+   L ELYLH+
Sbjct: 1593 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1637

Query: 543  DPKEFQRVR 569
             P+E +++R
Sbjct: 1638 -PEEARQLR 1645

[35][TOP]
>UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO
          Length = 1851

 Score =  121 bits (303), Expect = 4e-26
 Identities = 71/189 (37%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  + L VYGDD
Sbjct: 1473 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGDD 1532

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLKR F ++  
Sbjct: 1533 NLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSN 1592

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
             +  AP D  +++S L++++                  +++ E  ++N+   L ELYLH+
Sbjct: 1593 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1637

Query: 543  DPKEFQRVR 569
             P+E  ++R
Sbjct: 1638 -PEEACQLR 1645

[36][TOP]
>UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle
           virus RepID=POL1_APMV
          Length = 729

 Score =  120 bits (301), Expect = 7e-26
 Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK----PEKCR-FQQTVCLIVYGDD 182
           V++V  G+PSGF LTVV+N +FNE+L+RY ++K+  +    P +C  F   +  +VYGDD
Sbjct: 357 VWRVEGGIPSGFPLTVVMNGIFNELLVRYCFKKIMREGGATPLECSAFDSYIRFVVYGDD 416

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NLISV+P     FNG+ ++  +A   V ITDG DK  PT+E +P  + DFLKR F++   
Sbjct: 417 NLISVSPVIHDKFNGKLLKECMARFGVTITDGKDKTLPTLEFRPLEDCDFLKRGFIQRSE 476

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            V  AP + +++++ L++++              Y+G +         VNV + ELY+H+
Sbjct: 477 LVWDAPEERSSLYTQLHYVSTKMQSLE-----DAYTGNL---------VNV-IRELYMHS 521

Query: 543 DPKEFQRVR 569
            PKE   +R
Sbjct: 522 -PKEASDLR 529

[37][TOP]
>UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO
          Length = 1851

 Score =  119 bits (299), Expect = 1e-25
 Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  V L VYGDD
Sbjct: 1473 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDD 1532

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            N ISV      +F+G  ++  LA   + ITDG DK + T++ +   + DFLKR F ++  
Sbjct: 1533 NFISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSN 1592

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
             +  AP D  +++S L++++                  +++ E  ++N+   L ELYLH+
Sbjct: 1593 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1637

Query: 543  DPKEFQRVR 569
             P+E +++R
Sbjct: 1638 -PEEARQLR 1645

[38][TOP]
>UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus
           RepID=UPI0000163D14
          Length = 711

 Score =  119 bits (298), Expect = 2e-25
 Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
           V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL     AP+     F + + L+ YGDD
Sbjct: 332 VWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDD 391

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NLISV      +F+G+ ++ +LA+  V ITDG DK +  +  +   E DFLKR F++  +
Sbjct: 392 NLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSS 451

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            +  AP D  +++S L+++       +  +K   Y          + NV   L ELY+H+
Sbjct: 452 TIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNVLRELYMHS 496

Query: 543 --DPKEFQR 563
             +  EF+R
Sbjct: 497 PREATEFRR 505

[39][TOP]
>UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus
            RepID=POL1_CPMV
          Length = 1866

 Score =  119 bits (298), Expect = 2e-25
 Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL     AP+     F + + L+ YGDD
Sbjct: 1487 VWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDD 1546

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV      +F+G+ ++ +LA+  V ITDG DK +  +  +   E DFLKR F++  +
Sbjct: 1547 NLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSS 1606

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
             +  AP D  +++S L+++       +  +K   Y          + NV   L ELY+H+
Sbjct: 1607 TIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNVLRELYMHS 1651

Query: 543  --DPKEFQR 563
              +  EF+R
Sbjct: 1652 PREATEFRR 1660

[40][TOP]
>UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus
           RepID=UPI0000163D04
          Length = 713

 Score =  113 bits (283), Expect = 9e-24
 Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
           V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L     AP      F+  + ++ YGDD
Sbjct: 333 VWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDD 392

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NLISV      +F+G  ++  +A   + ITDG DK + T+E +   + DFLKR FLK  +
Sbjct: 393 NLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSS 452

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 527
            +  AP +  ++++ L+++  +    +   + +  +  V+V+ EL ++    ++E
Sbjct: 453 VLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 503

[41][TOP]
>UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus
            RepID=POL1_RCMV
          Length = 1864

 Score =  113 bits (283), Expect = 9e-24
 Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L     AP      F+  + ++ YGDD
Sbjct: 1484 VWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDD 1543

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV      +F+G  ++  +A   + ITDG DK + T+E +   + DFLKR FLK  +
Sbjct: 1544 NLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSS 1603

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 527
             +  AP +  ++++ L+++  +    +   + +  +  V+V+ EL ++    ++E
Sbjct: 1604 VLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 1654

[42][TOP]
>UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus
           RepID=UPI0000163CFC
          Length = 712

 Score =  112 bits (279), Expect = 3e-23
 Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGD 179
           +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+      P      F   V ++ YGD
Sbjct: 330 EVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGD 389

Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
           DNL+SV  +    F+G  ++  L    + ITDG DK +P +  +   + DFLKR F K  
Sbjct: 390 DNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKES 449

Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
             V   P +  ++++ L+++T +  + H               E  ++NV   + ELYLH
Sbjct: 450 DVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNVIRELYLH 494

Query: 540 NDPKEFQRVR 569
            DP+E   +R
Sbjct: 495 -DPREAAELR 503

[43][TOP]
>UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus
            (strain DG) RepID=POL1_CPSMV
          Length = 1858

 Score =  112 bits (279), Expect = 3e-23
 Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGD 179
            +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+      P      F   V ++ YGD
Sbjct: 1476 EVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGD 1535

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
            DNL+SV  +    F+G  ++  L    + ITDG DK +P +  +   + DFLKR F K  
Sbjct: 1536 DNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKES 1595

Query: 360  TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
              V   P +  ++++ L+++T +  + H               E  ++NV   + ELYLH
Sbjct: 1596 DVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNVIRELYLH 1640

Query: 540  NDPKEFQRVR 569
             DP+E   +R
Sbjct: 1641 -DPREAAELR 1649

[44][TOP]
>UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus
           RepID=Q06RG7_9SECO
          Length = 396

 Score =  111 bits (278), Expect = 3e-23
 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDD 182
           V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K +        F + V ++ YGDD
Sbjct: 134 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDD 193

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLKR F K   
Sbjct: 194 NLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKN 253

Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
           G+   AP +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 254 GIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 297

[45][TOP]
>UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO
          Length = 1857

 Score =  111 bits (278), Expect = 3e-23
 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDD 182
            V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K +        F + V ++ YGDD
Sbjct: 1478 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDD 1537

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLKR F K   
Sbjct: 1538 NLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKN 1597

Query: 363  GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
            G+   AP +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 1598 GIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1641

[46][TOP]
>UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO
          Length = 1860

 Score =  111 bits (278), Expect = 3e-23
 Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDD 182
            V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K +        F + V ++ YGDD
Sbjct: 1481 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDD 1540

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLKR F K   
Sbjct: 1541 NLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKN 1600

Query: 363  GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
            G+   AP +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 1601 GIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644

[47][TOP]
>UniRef100_B9UKJ7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cocoa necrosis
           virus RepID=B9UKJ7_9SECO
          Length = 76

 Score =  111 bits (277), Expect = 5e-23
 Identities = 53/68 (77%), Positives = 61/68 (89%)
 Frame = +3

Query: 84  NEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKV 263
           +EILIRYAY+KLAPKP++  F  +VCL+VYGDDNLISV+PS ASWF GEAIRV LAEKK+
Sbjct: 9   HEILIRYAYKKLAPKPQRNLFGVSVCLLVYGDDNLISVSPSIASWFTGEAIRVCLAEKKI 68

Query: 264 KITDGSDK 287
           KITDGSDK
Sbjct: 69  KITDGSDK 76

[48][TOP]
>UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus
           RepID=UPI000180D482
          Length = 474

 Score =  108 bits (270), Expect = 3e-22
 Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLI 191
           +++V  G+PSGF LTV+VNS+ NEIL++YAYR         R  F   V L+VYGDDNLI
Sbjct: 296 LYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLI 355

Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
           SV+ + +S FNGE +        + +TDG DK    I  +   + DFLKR F  L  G  
Sbjct: 356 SVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEW 415

Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
             P+   +++  L+++   K               +++ +  V N+N  L EL+LH
Sbjct: 416 VGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRELWLH 456

[49][TOP]
>UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO
          Length = 1853

 Score =  108 bits (270), Expect = 3e-22
 Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+VNS+ NEIL++YAYR         R  F   V L+VYGDDNLI
Sbjct: 1481 LYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLI 1540

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S FNGE +        + +TDG DK    I  +   + DFLKR F  L  G  
Sbjct: 1541 SVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEW 1600

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
              P+   +++  L+++   K               +++ +  V N+N  L EL+LH
Sbjct: 1601 VGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRELWLH 1641

[50][TOP]
>UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus
           RepID=Q2TCK2_9SECO
          Length = 709

 Score =  107 bits (268), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
           V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V ++VYGDD
Sbjct: 335 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDD 394

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NL+SV+     +F+G+ ++  LA  ++ ITDG DK +P ++ +   + DFLKR F   + 
Sbjct: 395 NLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNR 452

Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
           G+   AP +  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 453 GLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 496

[51][TOP]
>UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO
          Length = 1853

 Score =  107 bits (268), Expect = 5e-22
 Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V ++VYGDD
Sbjct: 1479 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDD 1538

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NL+SV+     +F+G+ ++  LA  ++ ITDG DK +P ++ +   + DFLKR F   + 
Sbjct: 1539 NLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNR 1596

Query: 363  GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
            G+   AP +  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 1597 GLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640

[52][TOP]
>UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO
          Length = 1860

 Score =  107 bits (267), Expect = 7e-22
 Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
            V++V CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V ++ YGDD
Sbjct: 1481 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDD 1540

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLKR F K  +
Sbjct: 1541 NLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRS 1600

Query: 363  GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
            G    +P +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 1601 GFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644

[53][TOP]
>UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot
           virus RepID=B2KL92_9SECO
          Length = 712

 Score =  107 bits (267), Expect = 7e-22
 Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
           V++V CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V ++ YGDD
Sbjct: 333 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDD 392

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLKR F K  +
Sbjct: 393 NLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRS 452

Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
           G    +P +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 453 GFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 496

[54][TOP]
>UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO
          Length = 1853

 Score =  107 bits (266), Expect = 9e-22
 Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDD 182
            V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V ++VYGDD
Sbjct: 1479 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMIPVSFDEYVSMVVYGDD 1538

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NL+SV+     +F+G+ ++  LA   + ITDG DK +P ++ +   + DFLKR F   + 
Sbjct: 1539 NLLSVSEVIKPYFDGKRLKDFLATLHITITDGKDKTSPFLQFRRLEDCDFLKRGF--KNR 1596

Query: 363  GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
            G+   AP D  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 1597 GLYWDAPEDKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640

[55][TOP]
>UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO
          Length = 1853

 Score =  106 bits (264), Expect = 1e-21
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+VNS+ NEIL++YA+R         R  F   V L+VYGDDNLI
Sbjct: 1481 LYRVENGIPSGFPLTVIVNSILNEILVKYAFRMCFADNPMVRESFDTHVSLVVYGDDNLI 1540

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + ++ FNGE +     +  + +TDG DK    I  +   + DFLKR F  L  G  
Sbjct: 1541 SVSDAISAKFNGEFLVDFFLKLSITVTDGVDKTKKGISFRRLADCDFLKRGFKNLPDGEW 1600

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH--ND 545
              P+   +++  L+++   K               +++ +  V N+N  L EL+LH  N+
Sbjct: 1601 IGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRELWLHSANE 1645

Query: 546  PKEFQR 563
              E +R
Sbjct: 1646 ATELRR 1651

[56][TOP]
>UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1
           RepID=UPI0000231CC7
          Length = 699

 Score =  105 bits (262), Expect = 2e-21
 Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDD 182
           G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K        R  F   V ++VYGDD
Sbjct: 329 GRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDD 388

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           NLISV+ + +S FNG  +   +    +K+TDG DK    IE +   + DFLKRKF +   
Sbjct: 389 NLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENAD 448

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
           G     +    ++  L+++   K               V++ E  + N N  L EL+L +
Sbjct: 449 GTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRELWLGS 493

Query: 543 DPK 551
             K
Sbjct: 494 PEK 496

[57][TOP]
>UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2
           RepID=UPI0000163DDB
          Length = 697

 Score =  105 bits (262), Expect = 2e-21
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
           +++V  G+PSGF LTVVVNS+ NEIL++YAY    A  P  +  F   V ++VYGDDNLI
Sbjct: 330 LYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLI 389

Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
           SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 390 SVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTW 449

Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
           + P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 450 RCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRELWLHDVAE 494

Query: 546 PKEFQ 560
            KEF+
Sbjct: 495 AKEFR 499

[58][TOP]
>UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO
          Length = 1869

 Score =  105 bits (262), Expect = 2e-21
 Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTVVVNS+ NEIL++YAY    A  P  +  F   V ++VYGDDNLI
Sbjct: 1502 LYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLI 1561

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 1562 SVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTW 1621

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
            + P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 1622 RCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRELWLHDVAE 1666

Query: 546  PKEFQ 560
             KEF+
Sbjct: 1667 AKEFR 1671

[59][TOP]
>UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1
          Length = 1842

 Score =  105 bits (262), Expect = 2e-21
 Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDD 182
            G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K        R  F   V ++VYGDD
Sbjct: 1472 GRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDD 1531

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV+ + +S FNG  +   +    +K+TDG DK    IE +   + DFLKRKF +   
Sbjct: 1532 NLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENAD 1591

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            G     +    ++  L+++   K               V++ E  + N N  L EL+L +
Sbjct: 1592 GTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRELWLGS 1636

Query: 543  DPK 551
              K
Sbjct: 1637 PEK 1639

[60][TOP]
>UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO
          Length = 1870

 Score =  104 bits (260), Expect = 4e-21
 Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 1562

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 1563 SVSDAISSRFDGNFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1622

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPK 551
            ++P+   +++  L+++   K               +++ E  + N N  L EL+LH D K
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLH-DVK 1666

Query: 552  EFQRVRS 572
            E +  R+
Sbjct: 1667 EAEEFRN 1673

[61][TOP]
>UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO
          Length = 1853

 Score =  104 bits (260), Expect = 4e-21
 Identities = 61/168 (36%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDD 182
            V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V ++VYGDD
Sbjct: 1479 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMISVSFDEYVSMVVYGDD 1538

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NL+SV      +F+G+ ++  LA   + ITDG DK +P ++ +   + DFLKR F   + 
Sbjct: 1539 NLLSVNEVIKPYFDGKRLKEFLATLHITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNR 1596

Query: 363  GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
            G+   AP +  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 1597 GLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640

[62][TOP]
>UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus
           RepID=UPI0000163DD4
          Length = 699

 Score =  104 bits (259), Expect = 6e-21
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
           +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 332 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 391

Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
           SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 392 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 451

Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
           ++P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 452 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 496

Query: 546 PKEFQ 560
            KEF+
Sbjct: 497 AKEFR 501

[63][TOP]
>UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO
          Length = 1870

 Score =  104 bits (259), Expect = 6e-21
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 1562

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 1563 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1622

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
            ++P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 1667

Query: 546  PKEFQ 560
             KEF+
Sbjct: 1668 AKEFR 1672

[64][TOP]
>UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO
          Length = 1769

 Score =  104 bits (259), Expect = 6e-21
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 1402 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPNVQSNFDAHVSMVVYGDDNLI 1461

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 1462 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1521

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
            ++P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 1522 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVRE 1566

Query: 546  PKEFQ 560
             KEF+
Sbjct: 1567 AKEFR 1571

[65][TOP]
>UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO
          Length = 1870

 Score =  104 bits (259), Expect = 6e-21
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 1562

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 1563 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1622

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
            ++P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 1667

Query: 546  PKEFQ 560
             KEF+
Sbjct: 1668 AKEFR 1672

[66][TOP]
>UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt
           virus 2 RepID=B8Y619_9SECO
          Length = 594

 Score =  104 bits (259), Expect = 6e-21
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
           +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 227 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFGDNPSVQSNFDAHVSMVVYGDDNLI 286

Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
           SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 287 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTW 346

Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
           ++P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 347 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILCELWLHDVKE 391

Query: 546 PKEFQ 560
            KEF+
Sbjct: 392 AKEFR 396

[67][TOP]
>UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1
          Length = 1842

 Score =  103 bits (258), Expect = 7e-21
 Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDD 182
            G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K        R  F   V + VYGDD
Sbjct: 1472 GRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTHVAMAVYGDD 1531

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            NLISV+ + +S FNG  +   +A   +K+TDG DK    IE +     DFLKR+F +   
Sbjct: 1532 NLISVSEAISSRFNGNFLVNFMANLGIKVTDGVDKTKIGIEFRTIENCDFLKRRFKENTD 1591

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
            G     +    ++  L+++   K               V++ E  + N N  L EL+L +
Sbjct: 1592 GTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRELWLED 1636

Query: 543  DPK 551
              K
Sbjct: 1637 PGK 1639

[68][TOP]
>UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO
          Length = 1869

 Score =  103 bits (256), Expect = 1e-20
 Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKP-EKCRFQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 1502 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFVDNPIVQSNFDAHVSMVVYGDDNLI 1561

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 1562 SVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKLNPDGTW 1621

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
            ++P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 1622 RSPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRELWLHDVIE 1666

Query: 546  PKEFQ 560
             KEF+
Sbjct: 1667 AKEFR 1671

[69][TOP]
>UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO
          Length = 280

 Score =  102 bits (254), Expect = 2e-20
 Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
           +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++VYGDDNLI
Sbjct: 108 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 167

Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
           SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 168 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTW 227

Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPK 551
           ++P+   +++  L+++   K               +++ E  + N N  L EL+LH D K
Sbjct: 228 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLH-DVK 271

Query: 552 E 554
           E
Sbjct: 272 E 272

[70][TOP]
>UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus
           RepID=Q3YC01_9SECO
          Length = 795

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 53/151 (35%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP------EKCRFQQTVCLIV 170
           G+ ++KV+CG+PSGF+LTV+VNS+ NE  +R+A++++           +    + V   V
Sbjct: 432 GRNLYKVSCGIPSGFSLTVIVNSLVNEFFLRFAWKRIVRASLGEAFVHRSIMDREVHFAV 491

Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDG---SDKDAPTIESKPFWELDFLKR 341
           YGDDNL+SV+   +S +N  +I   L E+ V + +G    ++D P     P    DFLKR
Sbjct: 492 YGDDNLVSVSDKYSSLYNLVSISSFLRERGVVLKNGQCKDEEDFPPFSPSPS-TCDFLKR 550

Query: 342 KFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 434
           +F+   +G + APLD +++    +W+  S+D
Sbjct: 551 RFVLGSSGRVLAPLDKSSLLGCAHWVRKSQD 581

[71][TOP]
>UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO
          Length = 1870

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
            +++V  G+PSGF LTV+ NS+ NEIL++YAY       P  +  F   V +  YGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIGNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMEEYGDDNLI 1562

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F     G  
Sbjct: 1563 SVSDAISSKFDGSFLVSFIEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTW 1622

Query: 372  QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
            ++P+   +++  L+++   K               +++ E  + N N  L EL+LH+  +
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 1667

Query: 546  PKEFQ 560
             KEF+
Sbjct: 1668 AKEFR 1672

[72][TOP]
>UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO
          Length = 2158

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
            KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K      + + V
Sbjct: 1435 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 1494

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
            YGDDNL++V P    W+   AI   L    V I +G DK+     SK     EL FL R 
Sbjct: 1495 YGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRG 1553

Query: 345  FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
            F +   G +QAPL   +I   +YW+ PS          +   T  + + + G   V E+L
Sbjct: 1554 FKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKL 1612

Query: 498  VLNVNVALME 527
            V +V  AL E
Sbjct: 1613 VTDVQNALKE 1622

[73][TOP]
>UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO
          Length = 2158

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
            KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K      + + V
Sbjct: 1435 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 1494

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
            YGDDNL++V P    W+   AI   L    V I +G DK+     SK     EL FL R 
Sbjct: 1495 YGDDNLVAV-PMELHWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRG 1553

Query: 345  FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
            F +   G +QAPL   +I   +YW+ PS          +   T  + + + G   V E+L
Sbjct: 1554 FKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKL 1612

Query: 498  VLNVNVALME 527
            V +V  AL E
Sbjct: 1613 VTDVQNALKE 1622

[74][TOP]
>UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU
          Length = 2155

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 64/190 (33%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
            KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K      + + V
Sbjct: 1438 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPHDFNQLFVAV 1497

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKRK 344
            YGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   EL FL R 
Sbjct: 1498 YGDDNLVAV-PLHLQWYSLPNIAQELDMVNVVIKNGLDKSMDVNEVQFQDLSELTFLSRG 1556

Query: 345  FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
            F +   G   APL   +I   +YW+ P+          +   T  + + + G+V   E+L
Sbjct: 1557 FKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDAQAMMENVETGIREAFHHGQV-AYEKL 1615

Query: 498  VLNVNVALME 527
            V +V  AL E
Sbjct: 1616 VADVQEALNE 1625

[75][TOP]
>UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO
          Length = 2151

 Score = 86.7 bits (213), Expect = 1e-15
 Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLI 167
            KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         +   F Q + + 
Sbjct: 1436 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIA 1494

Query: 168  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 341
            VYGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   EL FL R
Sbjct: 1495 VYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSR 1553

Query: 342  KFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEE 494
             F +   G   APL   +I   +YW+ P+          +   T  + + + G V   ++
Sbjct: 1554 GFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDK 1612

Query: 495  LVLNVNVALME 527
            LVL+V  AL E
Sbjct: 1613 LVLDVQTALDE 1623

[76][TOP]
>UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus
           RepID=UPI000043F357
          Length = 707

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
 Frame = +3

Query: 27  VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQTVCLIVYGDDNL 188
           V  G+PSGF LTV+VNS+ N   I ++Y KL  + E         F+Q V    YGDDNL
Sbjct: 343 VTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNL 402

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
           +SV       FN   I   LAE  V + +G+DK+   +    P  ++DFLKRKF+    G
Sbjct: 403 VSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-G 461

Query: 366 VIQAPLDMTAIFSSLYWL 419
            + APL+   I   L+W+
Sbjct: 462 HVVAPLNPVNITERLHWI 479

[77][TOP]
>UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV
          Length = 2250

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
 Frame = +3

Query: 27   VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQTVCLIVYGDDNL 188
            V  G+PSGF LTV+VNS+ N   I ++Y KL  + E         F+Q V    YGDDNL
Sbjct: 1886 VTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNL 1945

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
            +SV       FN   I   LAE  V + +G+DK+   +    P  ++DFLKRKF+    G
Sbjct: 1946 VSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-G 2004

Query: 366  VIQAPLDMTAIFSSLYWL 419
             + APL+   I   L+W+
Sbjct: 2005 HVVAPLNPVNITERLHWI 2022

[78][TOP]
>UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV
          Length = 2235

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
 Frame = +3

Query: 27   VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQTVCLIVYGDDNL 188
            V  G+PSGF LTV+VNS+ N   I ++Y KL  + E         F+Q V    YGDDNL
Sbjct: 1871 VTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNL 1930

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
            +SV       FN   I   LAE  V + +G+DK+   +    P  ++DFLKRKF+    G
Sbjct: 1931 VSVNDVITERFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-G 1989

Query: 366  VIQAPLDMTAIFSSLYWL 419
             + APL+   I   L+W+
Sbjct: 1990 HVVAPLNPVNITERLHWI 2007

[79][TOP]
>UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus
            RepID=A0N0G3_9VIRU
          Length = 1943

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLI 167
            KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         +   F Q + + 
Sbjct: 1228 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIA 1286

Query: 168  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 341
            VYGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   EL FL R
Sbjct: 1287 VYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSR 1345

Query: 342  KFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEE 494
             F +   G   APL   +I   +YW+ P+          +   T  + + + G V   ++
Sbjct: 1346 GFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDK 1404

Query: 495  LVLNVNVALME 527
            LV +V  AL E
Sbjct: 1405 LVSDVQTALDE 1415

[80][TOP]
>UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus
           RepID=UPI0000164A53
          Length = 709

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
 Frame = +3

Query: 27  VNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNL 188
           V  G+PSGF LTV+VNS+ N   + +AY KL + +  K       F+  V   VYGDDNL
Sbjct: 343 VTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNL 402

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
           ISV  +    FN   I   L E  V + +G+DK+   +    P  ++DFLKR+F  L  G
Sbjct: 403 ISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-G 461

Query: 366 VIQAPLDMTAIFSSLYWL 419
            I APL+   I   L+W+
Sbjct: 462 HIVAPLNTVNITERLHWV 479

[81][TOP]
>UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus
            RepID=Q9JGP2_9SECO
          Length = 2079

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
 Frame = +3

Query: 27   VNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNL 188
            V  G+PSGF LTV+VNS+ N   + +AY KL + +  K       F+  V   VYGDDNL
Sbjct: 1713 VTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNL 1772

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
            ISV  +    FN   I   L E  V + +G+DK+   +    P  ++DFLKR+F  L  G
Sbjct: 1773 ISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-G 1831

Query: 366  VIQAPLDMTAIFSSLYWL 419
             I APL+   I   L+W+
Sbjct: 1832 HIVAPLNTVNITERLHWV 1849

[82][TOP]
>UniRef100_Q769F2 RNA dependent RNA polymerase (Fragment) n=1 Tax=Satsuma dwarf virus
           RepID=Q769F2_SDV
          Length = 374

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
           +++++ G PSGFA TV++NSV NE  +++++  +      A +   C F +   + VYGD
Sbjct: 30  LYEIHGGTPSGFAPTVMLNSVVNEFYLKWSWMGIMREAGYAKEASLCAFHEATEISVYGD 89

Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL-KL 356
           DN +SVA   AS +N + I   L+   VK+ DG+ K        P  E+DFLKRKF+   
Sbjct: 90  DNFVSVATPVASLYNLKTISEFLSRVGVKLGDGA-KSGTIKPFIPLEEVDFLKRKFVADS 148

Query: 357 DTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
            +  I  PL+  +I   L+++                 G  D I  L LN+  AL E + 
Sbjct: 149 KSTAILCPLNKRSIEERLFYV----------------RGGQDEIAALELNIATALCEAFF 192

Query: 537 H 539
           H
Sbjct: 193 H 193

[83][TOP]
>UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO
          Length = 2163

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVCLI-VYGD 179
            +++ V  G PSGFALTV++NS+ N+  + +A+RK    ++P     R  +T C   VYGD
Sbjct: 1616 ELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMSRISPSMVTYRVMRTHCTFSVYGD 1675

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
            DN++S + +    +N   I   L    V ++DG  K    I+   F +LDFLKR++ +L+
Sbjct: 1676 DNVVSFSLAVRDMYNLCTIADELKTIGVTLSDGK-KTGVLIKWTGFKDLDFLKRRW-ELE 1733

Query: 360  TG-VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
             G   + PLD  AI   L+W+  S+D                 +E L  N   ALME + 
Sbjct: 1734 PGHGFKCPLDKMAIEERLFWVRKSEDN----------------MESLDDNCYSALMEAF- 1776

Query: 537  HNDPKEFQRVR 569
            H+ P+ F  +R
Sbjct: 1777 HHGPEYFHDLR 1787

[84][TOP]
>UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus
           RepID=UPI0000164A61
          Length = 694

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVCLI-VYGDD 182
           +++V  G PSGFALTV++NSV N+  + +A+RK+     P     R  ++ C   VYGDD
Sbjct: 335 LYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDD 394

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           N++S +      +N   I   L    V ++DG  K    ++   F ELDFLKR+++    
Sbjct: 395 NVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSG 453

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH- 539
                PL  +AI   L+W+  S+D                 +E L  N   ALME + H 
Sbjct: 454 QGFLCPLHKSAIEERLFWVRSSEDS----------------VETLDDNCYSALMEAFHHG 497

Query: 540 NDPKEFQRVR 569
            D   F R R
Sbjct: 498 RDYFNFLRAR 507

[85][TOP]
>UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO
          Length = 1915

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVCLI-VYGDD 182
            +++V  G PSGFALTV++NSV N+  + +A+RK+     P     R  ++ C   VYGDD
Sbjct: 1556 LYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDD 1615

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            N++S +      +N   I   L    V ++DG  K    ++   F ELDFLKR+++    
Sbjct: 1616 NVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSG 1674

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH- 539
                 PL  +AI   L+W+  S+D                 +E L  N   ALME + H 
Sbjct: 1675 QGFLCPLHKSAIEERLFWVRSSEDS----------------VETLDDNCYSALMEAFHHG 1718

Query: 540  NDPKEFQRVR 569
             D   F R R
Sbjct: 1719 RDYFNFLRAR 1728

[86][TOP]
>UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus
           RepID=Q20LA1_9SECO
          Length = 533

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
           G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L P+ E+  F   V LIVYGDDN+
Sbjct: 466 GSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVALIVYGDDNV 525

Query: 189 ISVAPS 206
           + + P+
Sbjct: 526 MGIHPN 531

[87][TOP]
>UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus
            RepID=Q9IJX4_CRPV
          Length = 1771

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVY 173
            G  V+      PSG   TV++N ++N +++R  +    RKLAP+ +  + F++ V +I Y
Sbjct: 1559 GDNVYMWTHSQPSGNPFTVIINCLYNSMIMRIVWILLARKLAPEMQSMKKFRENVSMISY 1618

Query: 174  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL- 350
            GDDN ++++     WFN   I   + E K + TD   K    ++     E+ FLK++F+ 
Sbjct: 1619 GDDNCLNISDRVVEWFNQITISEQMKEIKHEYTD-EGKTGDMVKFPSLSEIHFLKKRFVF 1677

Query: 351  --KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 524
              +L   V  APL    I+  L W                    +D  E L++N+N A  
Sbjct: 1678 SHQLQRTV--APLQKDVIYEMLNWT----------------RNTIDPNEILMMNINTAFR 1719

Query: 525  ELYLHNDPKEFQRVRS 572
            E+  H    E+Q++RS
Sbjct: 1720 EIVYHG-KSEYQKLRS 1734

[88][TOP]
>UniRef100_B4ZF30 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cycas necrotic
           stunt virus RepID=B4ZF30_CNSV
          Length = 73

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 50/73 (68%)
 Frame = +3

Query: 69  VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 248
           +NSV NEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL
Sbjct: 1   INSVLNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 60

Query: 249 AEKKVKITDGSDK 287
            +K V ITDGSDK
Sbjct: 61  KKKNVTITDGSDK 73

[89][TOP]
>UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling virus
            RepID=Q9YZ97_SDV
          Length = 872

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
            V++++ G PSGFA TV++NS+ NE  +++++  L      A +     F +   + +YGD
Sbjct: 527  VYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGLMKEAGYAKEASLYAFHEATEISLYGD 586

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
            DN +SVA   AS +N + I   L    VK+ DG+ K   T    P  E+DFLKR+F+   
Sbjct: 587  DNFVSVATPVASLYNLKTISEFLRRIGVKLGDGA-KTGITKPFIPLEEVDFLKRQFV--- 642

Query: 360  TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
                 A    TAI      L P K K    ++     G  D +  L LN+  AL E + H
Sbjct: 643  -----ADAGSTAI------LCPLK-KISIEERLFYVKGGQDELAALELNMATALCEAFFH 690

Query: 540  NDPKEFQR 563
               KE+ R
Sbjct: 691  G--KEYFR 696

[90][TOP]
>UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus
           RepID=UPI00004FF342
          Length = 675

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
           G  +++V+ G+P GFALTV+VNS+ N  L+R+++  +        F   V L V GDDNL
Sbjct: 327 GIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNL 385

Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKFLKLDTG 365
           +SV    A  FN + +   LA     + DGSDK+   + E  P  + DFLKR F K    
Sbjct: 386 VSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF-KARGD 444

Query: 366 VIQAPLDMTAIFSSLYWL 419
              APL   ++  SL+W+
Sbjct: 445 RYLAPLSWLSLSESLHWV 462

[91][TOP]
>UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus
            RepID=Q5G2U4_9SECO
          Length = 2227

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
            G  +++V+ G+P GFALTV+VNS+ N  L+R+++  +        F   V L V GDDNL
Sbjct: 1879 GIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNL 1937

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKFLKLDTG 365
            +SV    A  FN + +   LA     + DGSDK+   + E  P  + DFLKR F K    
Sbjct: 1938 VSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF-KARGD 1996

Query: 366  VIQAPLDMTAIFSSLYWL 419
               APL   ++  SL+W+
Sbjct: 1997 RYLAPLSWLSLSESLHWV 2014

[92][TOP]
>UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus
           RepID=UPI0000164A59
          Length = 682

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
           +++++ G PSGFA TV++NSV NE  +++++  L      A +     F +   + +YGD
Sbjct: 338 LYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGD 397

Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFL 350
           DN +SVA   AS +N   I   L    VK+ DG    A T   KPF    E+DFLKR+F+
Sbjct: 398 DNFVSVATPVASVYNLTTISNFLGRIGVKLGDG----AKTGTIKPFIPLEEVDFLKRQFV 453

Query: 351 KLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 524
             D+G   I  PL   +I   L+++                 G  D I  L LN+  AL 
Sbjct: 454 -ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELNIATALC 496

Query: 525 ELYLH 539
           E + H
Sbjct: 497 EAFFH 501

[93][TOP]
>UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV
          Length = 2081

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
            +++++ G PSGFA TV++NSV NE  +++++  L      A +     F +   + +YGD
Sbjct: 1737 LYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGD 1796

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFL 350
            DN +SVA   AS +N   I   L    VK+ DG    A T   KPF    E+DFLKR+F+
Sbjct: 1797 DNFVSVATPVASVYNLTTISNFLGRIGVKLGDG----AKTGTIKPFIPLEEVDFLKRQFV 1852

Query: 351  KLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 524
              D+G   I  PL   +I   L+++                 G  D I  L LN+  AL 
Sbjct: 1853 -ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELNIATALC 1895

Query: 525  ELYLH 539
            E + H
Sbjct: 1896 EAFFH 1900

[94][TOP]
>UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B
            RepID=A7KCA2_9VIRU
          Length = 1614

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
 Frame = +3

Query: 42   PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
            PSG  LTV++NS+ N + +RY Y  L P+     F+  V L+ YGDDN++SV+  C  WF
Sbjct: 1288 PSGNPLTVILNSIVNSLRMRYVYFMLNPEHTVTTFKDNVNLMTYGDDNIMSVSREC-DWF 1346

Query: 222  NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD-TGVIQAPLDMTAI 398
            N  +I  T A   +  T  +DK++ ++      +  FLKR +   D  G   APL+  +I
Sbjct: 1347 NHTSISETFATLNIVYT-MADKESASVPFINIKDASFLKRTWRMDDQLGCYVAPLEEESI 1405

Query: 399  FSSLYWLTPSK 431
              SL   T SK
Sbjct: 1406 EKSLMVWTRSK 1416

[95][TOP]
>UniRef100_UPI0000163DC1 RNA-dependent RNA polymerase n=1 Tax=Maize chlorotic dwarf virus
           RepID=UPI0000163DC1
          Length = 612

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLI 167
           V + +F+   G+PSGFA+TV+ NS  N   +  A+  L      +P+     F     ++
Sbjct: 346 VKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNYCKVV 405

Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLK 338
           VYGDDN++SV  +   ++N   +   L++  V  TD  D   P  +S PF E+    FLK
Sbjct: 406 VYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSVSFLK 463

Query: 339 RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
           R+++ L    + + +APLD T+I   L+W+    +                 IE L  N+
Sbjct: 464 RRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEALNQNI 507

Query: 510 NVALMELYLH 539
             AL E  +H
Sbjct: 508 ESALYEASIH 517

[96][TOP]
>UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU
          Length = 297

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[97][TOP]
>UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU
          Length = 297

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[98][TOP]
>UniRef100_O11979 Polyprotein n=2 Tax=Maize chlorotic dwarf virus RepID=O11979_9SECO
          Length = 3443

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
 Frame = +3

Query: 6    VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLI 167
            V + +F+   G+PSGFA+TV+ NS  N   +  A+  L      +P+     F     ++
Sbjct: 3177 VKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNYCKVV 3236

Query: 168  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLK 338
            VYGDDN++SV  +   ++N   +   L++  V  TD  D   P  +S PF E+    FLK
Sbjct: 3237 VYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSVSFLK 3294

Query: 339  RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
            R+++ L    + + +APLD T+I   L+W+    +                 IE L  N+
Sbjct: 3295 RRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEALNQNI 3338

Query: 510  NVALMELYLH 539
              AL E  +H
Sbjct: 3339 ESALYEASIH 3348

[99][TOP]
>UniRef100_Q8B3M2 Polyprotein n=1 Tax=Deformed wing virus RepID=Q8B3M2_9VIRU
          Length = 2893

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
            + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 375  APLDMTAIFSSLYW 416
            A LD  ++  +  W
Sbjct: 2815 ANLDKVSVEGTTNW 2828

[100][TOP]
>UniRef100_Q7TG18 Polyprotein n=1 Tax=Deformed wing virus RepID=Q7TG18_9VIRU
          Length = 2893

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
            + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 375  APLDMTAIFSSLYW 416
            A LD  ++  +  W
Sbjct: 2815 ANLDKVSVEGTTNW 2828

[101][TOP]
>UniRef100_Q6XMI0 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=Q6XMI0_9VIRU
          Length = 1566

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 1382 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 1440

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
            + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 1441 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 1499

Query: 375  APLDMTAIFSSLYW 416
            A LD  ++  +  W
Sbjct: 1500 ANLDKVSVEGTTNW 1513

[102][TOP]
>UniRef100_Q0EDK8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK8_9VIRU
          Length = 297

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[103][TOP]
>UniRef100_Q0EDI6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI6_9VIRU
          Length = 297

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[104][TOP]
>UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU
          Length = 1759

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
 Frame = +3

Query: 42   PSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPS 206
            PSG   TV++N ++N I++R ++     K  P+ +  + F + V LI YGDDN++++   
Sbjct: 1558 PSGNPFTVIINCLYNSIIMRLSWIRVMEKFQPRLKSMKWFNEYVALITYGDDNVLNIDAK 1617

Query: 207  CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL---KLDTGVIQA 377
               WFN   I   + E + + TD + K    ++S+   ++ FLKRKF    +L   V  A
Sbjct: 1618 VVEWFNQINISEVMTEMRHEYTDEA-KTGDIVKSRKLEDIFFLKRKFRFSPELQRHV--A 1674

Query: 378  PLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPKEF 557
            PL +  I+  L W   S                +D  E L+ N+  A  E+  H   +E+
Sbjct: 1675 PLKIEVIYEMLNWSRRS----------------IDPDEILMSNIETAFREVVYHG-KEEY 1717

Query: 558  QRVRS 572
             ++RS
Sbjct: 1718 DKLRS 1722

[105][TOP]
>UniRef100_A0ZSE7 Polyprotein (Fragment) n=13 Tax=Kakugo virus RepID=A0ZSE7_9VIRU
          Length = 297

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[106][TOP]
>UniRef100_Q0EDK3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK3_9VIRU
          Length = 297

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKISVEGTTNW 275

[107][TOP]
>UniRef100_Q0EDI5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI5_9VIRU
          Length = 297

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGVTDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[108][TOP]
>UniRef100_UPI0000163D77 RNA-dependent RNA polymerase n=1 Tax=Rice tungro spherical virus
           RepID=UPI0000163D77
          Length = 621

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
           G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T C IV 
Sbjct: 358 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 417

Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
           YGDDN++SV       +N + +   L+   V  TDG DK+ P   SKP+    ++ FLKR
Sbjct: 418 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 475

Query: 342 KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
            F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   D  ++
Sbjct: 476 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 534

Query: 495 LVLNVNVALMELYL 536
           LV  +N AL  + L
Sbjct: 535 LVRRLNSALTRVML 548

[109][TOP]
>UniRef100_Q98645 ORF1 protein (Fragment) n=1 Tax=Rice tungro spherical virus
            RepID=Q98645_9SECO
          Length = 1619

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
            G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T C IV 
Sbjct: 1355 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 1414

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
            YGDDN++SV       +N + +   L+   V  TDG DK+ P   SKP+    ++ FLKR
Sbjct: 1415 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 1472

Query: 342  KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
             F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   D  ++
Sbjct: 1473 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 1531

Query: 495  LVLNVNVALMELYL 536
            LV  +N AL  + L
Sbjct: 1532 LVQRLNSALKRVML 1545

[110][TOP]
>UniRef100_Q1MNG5 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG5_9SECO
          Length = 3471

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
            G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T C IV 
Sbjct: 3207 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3266

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
            YGDDN++SV       +N + +   L+   V  TDG DK+ P   SKP+    ++ FLKR
Sbjct: 3267 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3324

Query: 342  KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
             F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   D  ++
Sbjct: 3325 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3383

Query: 495  LVLNVNVALMELYL 536
            LV  +N AL  + L
Sbjct: 3384 LVQRLNSALKRVML 3397

[111][TOP]
>UniRef100_Q1MNG4 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG4_9SECO
          Length = 3471

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
            G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T C IV 
Sbjct: 3207 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3266

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
            YGDDN++SV       +N + +   L+   V  TDG DK+ P   SKP+    ++ FLKR
Sbjct: 3267 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3324

Query: 342  KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
             F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   D  ++
Sbjct: 3325 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3383

Query: 495  LVLNVNVALMELYL 536
            LV  +N AL  + L
Sbjct: 3384 LVQRLNSALRRVML 3397

[112][TOP]
>UniRef100_Q0EDJ0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ0_9VIRU
          Length = 297

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T + N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDIXNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[113][TOP]
>UniRef100_Q91PP5 Probable RNA-directed RNA polymerase n=1 Tax=Rice tungro spherical
            virus (isolate Vt6) RepID=POLG_RTSVT
          Length = 3471

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
            G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T C IV 
Sbjct: 3207 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3266

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
            YGDDN++SV       +N + +   L+   V  TDG DK+ P   SKP+    ++ FLKR
Sbjct: 3267 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3324

Query: 342  KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
             F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   D  ++
Sbjct: 3325 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3383

Query: 495  LVLNVNVALMELYL 536
            LV  +N AL  + L
Sbjct: 3384 LVQRLNSALKRVML 3397

[114][TOP]
>UniRef100_Q83034 Probable RNA-directed RNA polymerase n=2 Tax=Rice tungro spherical
            virus RepID=POLG_RTSVA
          Length = 3473

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
            G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T C IV 
Sbjct: 3210 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3269

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
            YGDDN++SV       +N + +   L+   V  TDG DK+ P   SKP+    ++ FLKR
Sbjct: 3270 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3327

Query: 342  KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
             F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   D  ++
Sbjct: 3328 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3386

Query: 495  LVLNVNVALMELYL 536
            LV  +N AL  + L
Sbjct: 3387 LVRRLNSALTRVML 3400

[115][TOP]
>UniRef100_Q0EDK9 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK9_9VIRU
          Length = 297

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+      P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGXTDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[116][TOP]
>UniRef100_Q0EDJ8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ8_9VIRU
          Length = 297

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K+  TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMGFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[117][TOP]
>UniRef100_A0ZSF0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF0_9VIRU
          Length = 297

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  +  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPLFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[118][TOP]
>UniRef100_Q5MH31 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q5MH31_9SECO
          Length = 3481

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
 Frame = +3

Query: 6    VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLI 167
            V + +F+   G+PSGFA+TV+ NS  N   +  A+  L      +P+     F +   ++
Sbjct: 3215 VKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISSSPLSPQSTLRDFDEYCKVV 3274

Query: 168  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLK 338
            VYGDDN++SV+     ++N   +   L++  V  TD  D   P  +S P+ ++    FLK
Sbjct: 3275 VYGDDNIVSVSEEFIPYYNLRMVAAYLSQFGVTYTD--DAKNPIEKSVPWVDIRTVSFLK 3332

Query: 339  RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
            R++  +    + + +APL+ T+I   L+W+    D                 IE L  N+
Sbjct: 3333 RRWTSIGGQLSTIYKAPLETTSIEERLHWIRECDDD----------------IEALNQNI 3376

Query: 510  NVALMELYLH 539
              AL E  +H
Sbjct: 3377 ESALYEASIH 3386

[119][TOP]
>UniRef100_B3F388 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F388_9VIRU
          Length = 139

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N + +RYAY  L PK E   F++ V L+ YGDDN++SV+P+ A W+
Sbjct: 59  PSGHPLTVIINSLVNSLYMRYAYCLLNPKHEVSSFKENVSLMTYGDDNIMSVSPT-APWY 117

Query: 222 NGEAIRVTLAEKKVKIT 272
           N  AI    A   +  T
Sbjct: 118 NHTAIAAAFATMDITYT 134

[120][TOP]
>UniRef100_A0ZSF1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF1_9VIRU
          Length = 297

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T     
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPXFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[121][TOP]
>UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia
            vitripennis virus RepID=C1K2M4_9VIRU
          Length = 787

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAP-KPEKCRFQQTVCLIVYGDD 182
            + + N G+PSG A TV+ NS  N I IR AY    RK AP   +   F+Q V +   GDD
Sbjct: 578  IVRFNTGMPSGNAGTVITNSECNSIYIRCAYLGLARKYAPVLADLYWFKQYVRMFSNGDD 637

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
             +++V P   SWFN   +    ++  +K+TD   K     E     E  +LKR F K  T
Sbjct: 638  LIMAVKPDIISWFNNRTLIDFFSQHNIKMTDAL-KSGKVREFCSLEEATYLKRGFKKHPT 696

Query: 363  --GVIQAPLDMTAIFSSLYWLTPSKDK 437
              G   APL+  +I  +  W+  S D+
Sbjct: 697  RPGEWLAPLERASITDTANWIWRSVDR 723

[122][TOP]
>UniRef100_A5A4Z3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cowpea mosaic virus
           RepID=A5A4Z3_CPMV
          Length = 203

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
           V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL     AP+     F + + L+ YGDD
Sbjct: 141 VWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLMGLVTYGDD 200

Query: 183 NLI 191
           NL+
Sbjct: 201 NLV 203

[123][TOP]
>UniRef100_Q6QLR4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Venturia canescens
           picorna-like virus RepID=Q6QLR4_9PICO
          Length = 514

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK-----PEKCRFQQTVCLIVYGDD 182
           VF+  CGLPSG   TV  NS  N + IR A+ +LA +      +   F + V L+  GDD
Sbjct: 328 VFRPTCGLPSGNCETVERNSQTNSLYIRIAFYELAKRYAPVYRDAYWFDKKVRLVTNGDD 387

Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITD----GSDKDAPTIESKPFWELDFLKRKFL 350
            + SV     SWFN   +     E  +K+TD    G  +D  +IE     E  +LKR F+
Sbjct: 388 LIASVKEDVISWFNNRTLIEFFVEYGLKMTDALKSGVVRDYCSIE-----EASYLKRGFV 442

Query: 351 KLDT--GVIQAPLDMTAIFSSLYWLTPSKDK 437
           K  T  G   APL+  +I  +  W+  S DK
Sbjct: 443 KHPTREGEWMAPLEEASITDTANWVWRSVDK 473

[124][TOP]
>UniRef100_Q7TFA5 Polyprotein n=1 Tax=Varroa destructor virus 1 RepID=Q7TFA5_9VIRU
          Length = 2893

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
            V++V CG+PSG  +T ++N++ N +LIR A++ +   P    F + V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWQGITDLP-LSEFSRHVVLVCYGDDLIMNV 2755

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
            +      FN   I    +  K++ TD  DK   T+  +      FLK  FLK  T  V  
Sbjct: 2756 SDEMIDKFNAVTIGDFFSRYKMEFTD-QDKSGNTVRWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 375  APLDMTAIFSSLYW 416
            A LD  +I  +  W
Sbjct: 2815 ANLDKVSIEGTTNW 2828

[125][TOP]
>UniRef100_Q76LW4 Polyprotein n=1 Tax=Kakugo virus RepID=Q76LW4_9VIRU
          Length = 2893

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
            + +    FN   I    ++ ++  TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYEMVFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 375  APLDMTAIFSSLYW 416
            A LD  ++  +  W
Sbjct: 2815 ANLDKVSVEGTTNW 2828

[126][TOP]
>UniRef100_Q0EDJ6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ6_9VIRU
          Length = 297

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD  ++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  D    T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNXIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[127][TOP]
>UniRef100_A5A4Z4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Bean pod mottle
           virus RepID=A5A4Z4_9SECO
          Length = 197

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
           V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  V L VYGDD
Sbjct: 135 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDD 194

Query: 183 NLI 191
           NL+
Sbjct: 195 NLV 197

[128][TOP]
>UniRef100_UPI0000167D17 RNA-dependent RNA polymerase n=1 Tax=Parsnip yellow fleck virus
           RepID=UPI0000167D17
          Length = 813

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 179
           + +V  G PSGF +TV+ NS  N   ++ A+  LA           C F + V   VYGD
Sbjct: 358 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 417

Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
           DN++++      W+N + +   L +   V +TDG+   A   E+KP+    E DFLKR F
Sbjct: 418 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 475

Query: 348 L--KLDTGVIQAPLDMTAIFSSLYWL 419
              +L   +  APL   +I   +YW+
Sbjct: 476 KADELIPSLFHAPLHKRSIEEQVYWI 501

[129][TOP]
>UniRef100_Q7LZW0 Polyprotein n=1 Tax=Parsnip yellow fleck virus RepID=Q7LZW0_9SECO
          Length = 637

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 179
           + +V  G PSGF +TV+ NS  N   ++ A+  LA           C F + V   VYGD
Sbjct: 491 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 550

Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
           DN++++      W+N + +   L +   V +TDG+   A   E+KP+    E DFLKR F
Sbjct: 551 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 608

Query: 348 L--KLDTGVIQAPLDMTAIFSSLYWL 419
              +L   +  APL   +I   +YW+
Sbjct: 609 KADELIPSLFHAPLHKRSIEEQVYWI 634

[130][TOP]
>UniRef100_Q1LZW4 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q1LZW4_9VIRU
          Length = 2107

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            +L SV+   + WFN  AI   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHAITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008

Query: 363  GVIQAPLDMTAIFSSLYW 416
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[131][TOP]
>UniRef100_Q0EDK4 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK4_9VIRU
          Length = 297

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A L   ++  +  W
Sbjct: 262 ANLXKVSVEGTTNW 275

[132][TOP]
>UniRef100_Q05057 Probable RNA-directed RNA polymerase n=1 Tax=Parsnip yellow fleck
            virus (isolate P-121) RepID=POLG_PYFV1
          Length = 3027

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 179
            + +V  G PSGF +TV+ NS  N   ++ A+  LA           C F + V   VYGD
Sbjct: 2572 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 2631

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
            DN++++      W+N + +   L +   V +TDG+   A   E+KP+    E DFLKR F
Sbjct: 2632 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 2689

Query: 348  L--KLDTGVIQAPLDMTAIFSSLYWL 419
               +L   +  APL   +I   +YW+
Sbjct: 2690 KADELIPSLFHAPLHKRSIEEQVYWI 2715

[133][TOP]
>UniRef100_Q0EDJ5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ5_9VIRU
          Length = 297

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD  ++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  D    T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNXIDKFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[134][TOP]
>UniRef100_A6NA62 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato torrado
           virus RepID=A6NA62_9SECO
          Length = 216

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
           KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K      + + V
Sbjct: 96  KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 155

Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
           YGDDNL++V P    W+   AI   L    V I +G DK+     SK     EL FL R 
Sbjct: 156 YGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRG 214

Query: 345 F 347
           F
Sbjct: 215 F 215

[135][TOP]
>UniRef100_A1X599 Polyprotein (Fragment) n=1 Tax=Deformed wing virus
           RepID=A1X599_9VIRU
          Length = 205

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 40/115 (34%), Positives = 64/115 (55%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 90  VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 148

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T
Sbjct: 149 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 202

[136][TOP]
>UniRef100_Q09X76 Nonstructural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q09X76_9VIRU
          Length = 2107

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVARIFYGDD 1949

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDQ 2008

Query: 363  GVIQAPLDMTAIFSSLYW 416
              I APL    I     W
Sbjct: 2009 FWI-APLSQNTIEDMCMW 2025

[137][TOP]
>UniRef100_Q91NQ2 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q91NQ2_9VIRU
          Length = 2107

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDH 2008

Query: 363  GVIQAPLDMTAIFSSLYW 416
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[138][TOP]
>UniRef100_Q6WGS3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS3_9PICO
          Length = 151

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 40/100 (40%), Positives = 59/100 (59%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           + + N   PSG  LTV++NS+ N + +RYAY  L+P+ +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLSPQKDLLTFKHHVALFTYGDDNICGV 109

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
           +  CA +F    I+  LAE  ++ T  +DK+A   ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144

[139][TOP]
>UniRef100_Q5DM98 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q5DM98_9VIRU
          Length = 2107

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008

Query: 363  GVIQAPLDMTAIFSSLYW 416
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[140][TOP]
>UniRef100_Q4JFT3 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q4JFT3_9VIRU
          Length = 2107

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 183  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008

Query: 363  GVIQAPLDMTAIFSSLYW 416
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[141][TOP]
>UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU
          Length = 3085

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
            VFKVN G+ +G  +T VVNSV N IL+ Y + K+A +     F +   +IV GDD +IS+
Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIA-RRRASEFFKLTYIIVMGDDVVISL 2815

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 362
                   F+   I    A+  +K+TD S+K+  T E KP   F + +FL R F   D   
Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDK 437
             +  AP+   A+F    W++  +D+
Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898

[142][TOP]
>UniRef100_Q6WGR8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGR8_9PICO
          Length = 151

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 40/100 (40%), Positives = 58/100 (58%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           + + N   PSG  LTV++NS+ N + +RYAY  L P+ +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYALNPQKDLLTFKHRVALFTYGDDNICGV 109

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
           +  CA +F    I+  LAE  ++ T  +DK+A   ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144

[143][TOP]
>UniRef100_Q0EDJ2 Polyprotein (Fragment) n=2 Tax=Kakugo virus RepID=Q0EDJ2_9VIRU
          Length = 297

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V +V CG+PSG   T ++N++ N +LIR A+  +   P    F Q V L+ YGDD  ++V
Sbjct: 144 VXRVPCGIPSGSPXTDILNTISNCLLIRLAWLGITDXP-LSEFSQNVVLVCYGDDLXMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  D    T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[144][TOP]
>UniRef100_B3F389 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F389_9VIRU
          Length = 139

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 34/77 (44%), Positives = 46/77 (59%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N + IRY YR L PK E   F+Q V L+ YGDDN++ ++    SWF
Sbjct: 59  PSGHPLTVIINSLVNSLYIRYCYRMLNPKKEVITFKQNVNLMTYGDDNIMGISDK-ISWF 117

Query: 222 NGEAIRVTLAEKKVKIT 272
           N  +I   L    +  T
Sbjct: 118 NHTSIADCLGMANIVYT 134

[145][TOP]
>UniRef100_A7KCA0 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-A
            RepID=A7KCA0_9VIRU
          Length = 1689

 Score = 67.4 bits (163), Expect = 7e-10
 Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
 Frame = +3

Query: 27   VNCGL-PSGFALTVVVNSVFNEILIRYAYRKLAPKPE--KCRFQQTVCLIVYGDDNLISV 197
            ++CG  PSG  LTV +N + N +L+R AY  + P  E     F+    ++ YGDD   SV
Sbjct: 1486 IHCGSNPSGQNLTVYINCIVNSLLLRCAYYHMYPAAEGNPEPFRHNCAVMTYGDDVKGSV 1545

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL-KLDTGVIQ 374
               C  W+N       LAE+ +  T    +  PT       + DFLKR  L   +TG+I 
Sbjct: 1546 RQEC-DWYNHITYAQFLAERDMVFTMPDKESTPTPYMNDL-DADFLKRHNLYNPETGLIH 1603

Query: 375  APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSG 473
              LD  +IF SL+ +  SK      Q A    G
Sbjct: 1604 GVLDQNSIFKSLHSVLKSKAISAEDQSAQNIDG 1636

[146][TOP]
>UniRef100_Q6WGS5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=unidentified
           picorna-like virus RepID=Q6WGS5_9PICO
          Length = 151

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/100 (40%), Positives = 58/100 (58%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           + + N   PSG  LTV++NS+ N + +RYAY  L P+ +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNPQKDLLTFKHHVALFTYGDDNICGV 109

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
           +  CA +F    I+  LAE  ++ T  +DK+A   ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144

[147][TOP]
>UniRef100_Q6EEL1 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q6EEL1_9SECO
          Length = 3457

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
 Frame = +3

Query: 6    VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQTVCLI 167
            V + +F+   G+PSGFA+TV+ NS  N   +  A+        L+P+     F +   +I
Sbjct: 3191 VKEYLFQYCQGMPSGFAMTVIFNSFMNYYYLSLAWMNLISASPLSPQASLRYFDEYCKVI 3250

Query: 168  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD---FLK 338
            VYGDDN+++V      ++N   +   L++  V  TD  D   P  +S+ + +++   FLK
Sbjct: 3251 VYGDDNIVAVNEEFLEYYNLRLVAGYLSQFGVSYTD--DAKNPIEKSERYVKIEDVTFLK 3308

Query: 339  RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
            R+++ L    + + +APLD  +I   L W+    D            GE+     LV N+
Sbjct: 3309 RRWVSLGGRASMLYKAPLDKVSIEERLNWIRECDD------------GEL----ALVQNI 3352

Query: 510  NVALMELYLH 539
              AL E  +H
Sbjct: 3353 ESALYEASIH 3362

[148][TOP]
>UniRef100_Q0EDK2 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK2_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P      Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A L   ++  +  W
Sbjct: 262 ANLXKISVEGTTNW 275

[149][TOP]
>UniRef100_Q0EDK1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK1_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P      Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 375 APLDMTAIFSSLYW 416
           A L   ++  +  W
Sbjct: 262 ANLXKXSVEGTTNW 275

[150][TOP]
>UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU
          Length = 3085

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
            VFKVN G+ +G  +T VVNSV N IL+ Y + K+  +     F +   +IV GDD +IS+
Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 2815

Query: 198  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 362
                   F+   I    A+  +K+TD S+K+  T E KP   F + +FL R F   D   
Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873

Query: 363  GVIQAPLDMTAIFSSLYWLTPSKDK 437
             +  AP+   A+F    W++  +D+
Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898

[151][TOP]
>UniRef100_B3F394 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F394_9VIRU
          Length = 138

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 30/71 (42%), Positives = 47/71 (66%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++N + N + +RY Y KL+P+     F++ V ++ YGDDN++ V+ S A WF
Sbjct: 58  PSGHPLTVIINGLANSLYLRYCYAKLSPEANCVNFKRDVAVMTYGDDNIMGVSDS-APWF 116

Query: 222 NGEAIRVTLAE 254
           N   ++ TLA+
Sbjct: 117 NHTTLQSTLAD 127

[152][TOP]
>UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious
           flacherie virus RepID=A3RKR2_9VIRU
          Length = 639

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           VFKVN G+ +G  +T VVNSV N IL+ Y + K+  +     F +   +IV GDD +IS+
Sbjct: 311 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 369

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 362
                  F+   I    A+  +K+TD S+K+  T E KP   F + +FL R F   D   
Sbjct: 370 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 427

Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDK 437
            +  AP+   A+F    W++  +D+
Sbjct: 428 DITFAPVKTIALFDCPLWISKGQDE 452

[153][TOP]
>UniRef100_UPI0001765C94 RNA-dependent RNA polymerase n=1 Tax=Tomato marchitez virus
           RepID=UPI0001765C94
          Length = 249

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLI 167
           KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         +   F Q + + 
Sbjct: 132 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIA 190

Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 341
           VYGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   EL FL R
Sbjct: 191 VYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSR 249

[154][TOP]
>UniRef100_B1PM64 Polyprotein (Fragment) n=1 Tax=Tomato torrado virus
           RepID=B1PM64_9SECO
          Length = 910

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 59/190 (31%), Positives = 81/190 (42%), Gaps = 19/190 (10%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
           KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K      + + V
Sbjct: 187 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 246

Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
           YGDDNL++V P    W+   AI   L    V I +G DK+     SK     E  FL   
Sbjct: 247 YGDDNLVAV-PMELHWYTLPAIAQELEVVNVIIKNGIDKNMDVSSSKMLDLSEPTFLXXX 305

Query: 345 FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
                                 YW+ PS          +   T  + + + G   V E+L
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKL 364

Query: 498 VLNVNVALME 527
           V +V  AL E
Sbjct: 365 VADVQNALKE 374

[155][TOP]
>UniRef100_B3F397 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F397_9VIRU
          Length = 152

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 38/96 (39%), Positives = 57/96 (59%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N + +RYAY  L P+ E   F++ V L+ YGDDN+++V+ +   W+
Sbjct: 59  PSGHPLTVIINSLVNSLYMRYAYIILNPEQESASFRKNVALLTYGDDNILTVSRN-IDWY 117

Query: 222 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 329
           N   I    A+  +  T   DK+A   ES PF  L+
Sbjct: 118 NHTTITQAFADIGLVYT-MPDKEA---ESVPFLSLN 149

[156][TOP]
>UniRef100_B3F387 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F387_9VIRU
          Length = 139

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 33/77 (42%), Positives = 47/77 (61%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N + +RY Y  L PK     F++ V L+ YGDDN++ V+P  A WF
Sbjct: 59  PSGHPLTVIINSIVNSLYMRYCYVMLNPKFTVATFKKHVRLMTYGDDNIMGVSPD-ARWF 117

Query: 222 NGEAIRVTLAEKKVKIT 272
           N  AI   L++  +  T
Sbjct: 118 NHTAIAKVLSDIDITYT 134

[157][TOP]
>UniRef100_B3F390 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F390_9VIRU
          Length = 139

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N + +RY YR L P  E   F++ V L+ YGDDN+++V+    SWF
Sbjct: 59  PSGHPLTVIINSLANALYMRYCYRILNPAHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117

Query: 222 NGEAIRVTLAEKKVKIT 272
           N  +I  TL E  +  T
Sbjct: 118 NHTSIANTLKEIGITYT 134

[158][TOP]
>UniRef100_Q6WGT7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGT7_9PICO
          Length = 148

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++ V L+ YGDDN++    S   WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114

Query: 222 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 329
           N  AI   LA   V+ T  +DK++   +S PF  +D
Sbjct: 115 NHTAIVAELANIGVEYT-MADKES---KSVPFIHID 146

[159][TOP]
>UniRef100_Q6WGS2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS2_9PICO
          Length = 148

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 40/96 (41%), Positives = 55/96 (57%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++ V L+ YGDDN++    S   WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114

Query: 222 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 329
           N  AI   LA   V+ T  +DK++   +S PF  +D
Sbjct: 115 NHTAIVAELANIGVEYT-MADKES---KSVPFIHID 146

[160][TOP]
>UniRef100_Q6A1M5 Polyprotein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q6A1M5_TRSV
          Length = 254

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 31/52 (59%), Positives = 40/52 (76%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
           +VF+V  G+PSG ALTV++NSVFNEILIRY Y+ + P PE  RF+  V L+V
Sbjct: 203 QVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVV 254

[161][TOP]
>UniRef100_B6UIR8 Polyprotein n=1 Tax=Carrot necrotic dieback virus RepID=B6UIR8_9SECO
          Length = 3015

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQTVCLIVYGD 179
            V +++ G PSGF +TV+ NS  N   ++ A+  LA +  +        F   V   VYGD
Sbjct: 2563 VLRISGGGPSGFPMTVIFNSFINLFYLQSAWIMLASQNGRSDISCPSNFPSFVRACVYGD 2622

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWEL---DFLKRKF 347
            DN++++      W+N + +   L +   V +TDG+   A    ++P+ ++   DFLKR F
Sbjct: 2623 DNIVAIKNEVLPWYNLQTVSKILKDYFGVTMTDGAKNCAE--NAQPYGKILDFDFLKRNF 2680

Query: 348  L--KLDTGVIQAPLDMTAIFSSLYWLTPSKD 434
               +L   +  APL   +I   +YW+    D
Sbjct: 2681 RPDELIPSLFHAPLHKRSIEEQVYWIREGGD 2711

[162][TOP]
>UniRef100_B3F391 RNA-dependent RNA polymerase (Fragment) n=2 Tax=uncultured marine
           RNA virus RepID=B3F391_9VIRU
          Length = 139

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N + +RY YR L P  E   F++ V L+ YGDDN+++V+    SWF
Sbjct: 59  PSGHPLTVIINSLANALYMRYCYRILNPVHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117

Query: 222 NGEAIRVTLAEKKVKIT 272
           N  +I  TL E  +  T
Sbjct: 118 NHTSIANTLKEIGITYT 134

[163][TOP]
>UniRef100_Q6WGS9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS9_9PICO
          Length = 148

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++ V L+ YGDDN++        WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMGFK---QDWF 114

Query: 222 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 302
           N  AI   LA   V+ T  D   K  P+I
Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143

[164][TOP]
>UniRef100_A5A104 Polyprotein n=1 Tax=Brevicoryne brassicae picorna-like virus
            RepID=A5A104_9VIRU
          Length = 2983

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY---RKLAPKPEKCRFQQTVCLIVYGDDNL 188
            +++V CGLPSG   TV+ NS+ N I IR A+    + +       F+  + LI YGDD +
Sbjct: 2776 LYEVQCGLPSGNPATVIFNSIVNSIYIRCAWLDVMRNSSYKSLLDFRNNIKLITYGDDLI 2835

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWE-LDFLKRKFL--KLD 359
             S+  S +  FN  ++     +  +K TD + K    +E   + E   FLK  F    + 
Sbjct: 2836 ASIDNSVSDKFNNNSLSHFFLKHNIKFTDAA-KTGVNVEPYIYLETATFLKHAFKPHPIR 2894

Query: 360  TGVIQAPLDMTAIFSSLYWLTPSKD-KFHTHQKASQ-----YSGEVDVIEELVLNVNVAL 521
             GV  A L+  +I     W+  S D K  T+    Q     Y    D     V  ++ A 
Sbjct: 2895 QGVYLAQLEELSITECANWIRKSPDPKTATYDNCVQGTMLAYGHGPDYYNRYVKKISEAW 2954

Query: 522  MELY 533
             E Y
Sbjct: 2955 FEKY 2958

[165][TOP]
>UniRef100_Q6WGR9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGR9_9PICO
          Length = 151

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 39/100 (39%), Positives = 57/100 (57%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
           + + N   PSG  LTV++NS+ N + +RYAY  L  + +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNLQKDLLTFKHHVALFTYGDDNICGV 109

Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
           +  CA +F    I+  LAE  ++ T  +DK+A   ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144

[166][TOP]
>UniRef100_Q6A2S5 Polyprotein (Fragment) n=1 Tax=Potato black ringspot virus
           RepID=Q6A2S5_9SECO
          Length = 252

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
           +VF+V  G+PSG ALTV++NSVFNEILIRY Y+ + P PE  RF+  V L V
Sbjct: 201 QVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVVPSPEFNRFETFVTLAV 252

[167][TOP]
>UniRef100_B3F386 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F386_9VIRU
          Length = 139

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N I +RY Y  L P  E   F+  V L+ YGDDN+++V+  C  W+
Sbjct: 59  PSGNPLTVILNSIVNCIRMRYVYLVLNPDKEVETFKNNVSLMTYGDDNIMTVSEEC-DWY 117

Query: 222 NGEAIRVTLAEKKVKIT 272
           N  AI     E  V  T
Sbjct: 118 NHTAISQAFKESGVVYT 134

[168][TOP]
>UniRef100_Q6WGS1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS1_9PICO
          Length = 148

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++   L+ YGDDN++        WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENESLLTYGDDNVMGFK---QDWF 114

Query: 222 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 302
           N  AI   LA   V+ T  D   K  P+I
Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143

[169][TOP]
>UniRef100_Q6A1M4 Polyprotein (Fragment) n=1 Tax=Squash mosaic virus
           RepID=Q6A1M4_9SECO
          Length = 243

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
 Frame = +3

Query: 15  KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLI 167
           +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V L+
Sbjct: 187 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLV 242

[170][TOP]
>UniRef100_B3F385 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F385_9VIRU
          Length = 139

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++N + N +  RY Y  L P  E   F+  V L+ YGDDN++ V+P  A WF
Sbjct: 59  PSGHPLTVIINGLANSLYNRYCYFILNPNSEVHSFKNNVNLMTYGDDNIMGVSPE-APWF 117

Query: 222 NGEAIRVTLAEKKVKIT 272
           N  AI   L++  V  T
Sbjct: 118 NHTAIADALSKIGVTYT 134

[171][TOP]
>UniRef100_A4UVR7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR7_SDV
          Length = 319

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
 Frame = +3

Query: 138 CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
           C F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+ K        P 
Sbjct: 21  CAFHEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA-KSGTIKPFIPL 79

Query: 318 WELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIE 491
            E+DFLKR+F+  D+G   I  PL   +I   L+++                 G  D + 
Sbjct: 80  EEVDFLKRQFI-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELA 122

Query: 492 ELVLNVNVALMELYLH 539
            L LNV  AL E + H
Sbjct: 123 ALELNVATALCEAFFH 138

[172][TOP]
>UniRef100_Q2HWK3 Polyprotein n=1 Tax=Rhizosolenia setigera RNA virus
            RepID=Q2HWK3_9VIRU
          Length = 1605

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
 Frame = +3

Query: 42   PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS----- 206
            PSG  LTV  NS+ N +  R A+RK+ P     R++  V L+ YGDD  +SV+P      
Sbjct: 1396 PSGQNLTVYTNSIVNSLYHRCAFRKIYPN-FSGRYRDAVALMTYGDDVKMSVSPKFPDYN 1454

Query: 207  ---CASWFNGEAIRVTLAEKK-VKITDGSDKDAPTIESKPFWELDF-LKRKFLKLDTGVI 371
                 S FN + I  T+AEK+   +     +DA  ++ K  WE  +        ++ G+ 
Sbjct: 1455 HTRIQSEFNKQGIEYTMAEKEAASVPFIQHEDADFLKRKSRWEPSYSYTEGDGTINKGMW 1514

Query: 372  QAPLDMTAIFSSLYWLTPSKDK 437
             A LD  +IF SL+    SK K
Sbjct: 1515 LAMLDEESIFKSLHANLASKVK 1536

[173][TOP]
>UniRef100_Q1L028 Nonstructural protein n=1 Tax=Homalodisca coagulata virus-1
            RepID=Q1L028_9VIRU
          Length = 1795

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
 Frame = +3

Query: 39   LPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQ---TVCLIVYGDDNLISVAPSC 209
            LPSG  LT +VNS++  ++ RY   K +      +  Q    + L+ YGDD+++S+    
Sbjct: 1589 LPSGHFLTAIVNSLYVNLIFRYLLAKSSKLTSHIQIDQLCRRMKLVSYGDDHIVSIPSGY 1648

Query: 210  ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDTGVIQAPLD 386
               FN   +    +E  +  TD +  D    E++   ++ FLKR F  + +     APL 
Sbjct: 1649 EKIFNQSTLPTLFSEIGMTYTDETKSDREVPETRRIEDVTFLKRGFRWEKELNRYVAPLS 1708

Query: 387  MTAIFSSLYWLTPS 428
            +  +  + +W + S
Sbjct: 1709 LDTVLETPFWRSKS 1722

[174][TOP]
>UniRef100_B3F393 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F393_9VIRU
          Length = 139

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/70 (41%), Positives = 42/70 (60%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++NS+ N + IRY+Y    P  E   F+  V LI YGDDN + ++ +   WF
Sbjct: 59  PSGHPLTVIINSLVNSLYIRYSYYLTNPNQEIDTFKDNVALITYGDDNAMGISNN-VPWF 117

Query: 222 NGEAIRVTLA 251
           N  +I+  L+
Sbjct: 118 NHTSIQQALS 127

[175][TOP]
>UniRef100_A7LM73 Polyprotein n=1 Tax=Honey bee slow paralysis virus RepID=A7LM73_9VIRU
          Length = 2964

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
 Frame = +3

Query: 36   GLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDNLISVAP 203
            G+ SG  +T  +NS   +  I+ A+    R+L  K     F +   ++VYGDD ++SV+ 
Sbjct: 2771 GIASGSPITAELNSEVGKKYIKLAFLGICRQLNYKYSLNDFNKHCRVVVYGDDLILSVSD 2830

Query: 204  SCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL--KLDTGVIQA 377
            +  SWFN ++I   L    +++TD + KD   ++ +P  +  FLKR F      +G+  A
Sbjct: 2831 AFVSWFNLQSISEYLDNYGIRLTDVT-KDGTIVKYRPLADSSFLKRSFKPHPSRSGIYLA 2889

Query: 378  PLDMTAIFSSLYWLTPSKDK 437
            P++  +      W     D+
Sbjct: 2890 PIEPRSYQECTNWCHKQNDE 2909

[176][TOP]
>UniRef100_Q672I1 Capsid protein n=1 Tax=Sapovirus Hu/Dresden/pJG-Sap01/DE
            RepID=POLG_SVSAP
          Length = 2280

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3    FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
            +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 1551

Query: 174  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
            GDD + SV P+ AS F+     +T    K    D SD   PT  + P     FLKR F +
Sbjct: 1552 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 1605

Query: 354  LDTGVIQAPLDMTAIFSSLYWLTPSK 431
               GV +A LD+T+I    YWL  ++
Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630

[177][TOP]
>UniRef100_Q9IPD8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sapovirus
           Ebt3/1996/JPN RepID=Q9IPD8_9CALI
          Length = 261

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 65  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 124

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
           GDD + SV P+ AS F+     +T    K    D SD   PT  + P     FLKR F +
Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 178

Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
              GV +A LD+T+I    YWL  ++
Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203

[178][TOP]
>UniRef100_Q9DSN9 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q9DSN9_9VIRU
          Length = 1906

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 17/196 (8%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCR----FQQTVC 161
            G  V+ +    PSG   T  +N   N + +R  +   + K       KC     F + V 
Sbjct: 1693 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKCYVMKDFSKHVS 1752

Query: 162  LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWE 323
            ++ YGDDN+I+ +   + WFN E I     +     TD   G + + P   TIE     +
Sbjct: 1753 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGKNGEVPKWRTIE-----D 1807

Query: 324  LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 497
            + +LKRKF + D+   V +APL M  I     W                  G +D+ E  
Sbjct: 1808 VQYLKRKF-RYDSKRKVWEAPLCMDTILEMPNWC----------------RGSLDIQEGT 1850

Query: 498  VLNVNVALMELYLHND 545
             +N   A+MEL +H +
Sbjct: 1851 KVNCENAIMELSMHEE 1866

[179][TOP]
>UniRef100_Q6XDK5 Polyprotein n=1 Tax=Sapovirus Mc114 RepID=Q6XDK5_9CALI
          Length = 2280

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3    FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
            +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1551

Query: 174  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
            GDD + SV P+ AS F+     +T    K    D SD   PT  + P     FLKR F +
Sbjct: 1552 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 1605

Query: 354  LDTGVIQAPLDMTAIFSSLYWLTPSK 431
               GV +A LD+T+I    YWL  ++
Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630

[180][TOP]
>UniRef100_Q5Y975 Nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 1
            RepID=Q5Y975_9VIRU
          Length = 1396

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 17/183 (9%)
 Frame = +3

Query: 42   PSGFALTVVVNSVFNEILIRYAY---------------RKLAPKPEKCRFQQTVCLIVYG 176
            PSG   T  +N + N I +R  +               +K   K     F+  V LI YG
Sbjct: 1188 PSGNPATTPLNCLINSIGLRLCFLRCFEEHKAFFMELMKKFGCKTRMELFRLLVSLISYG 1247

Query: 177  DDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKFL- 350
            DDN+I++ P  +  FN   I    AE     TD + +    + + K   E+ FLKR F+ 
Sbjct: 1248 DDNVINIHPLISHLFNMNTITKYFAEFGFTYTDETKQVGKGVPDYKTLEEVSFLKRGFIF 1307

Query: 351  KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 530
              +     APLD+  I   + W+                  ++D +E   +N   A+MEL
Sbjct: 1308 NEERNCYDAPLDINTILEMINWVRK----------------DLDQVESTKINCENAIMEL 1351

Query: 531  YLH 539
             +H
Sbjct: 1352 AMH 1354

[181][TOP]
>UniRef100_Q69014 Capsid protein (Fragment) n=1 Tax=Sapporo virus-Manchester
            RepID=POLG_SVM93
          Length = 2208

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3    FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
            +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 1420 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1479

Query: 174  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
            GDD + SV P+ AS F+     +T    K    D SD   PT  + P     FLKR F +
Sbjct: 1480 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 1533

Query: 354  LDTGVIQAPLDMTAIFSSLYWLTPSK 431
               G I+A LD+T+I    YWL  ++
Sbjct: 1534 TPHG-IRALLDITSITRQFYWLKANR 1558

[182][TOP]
>UniRef100_Q91EJ7 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Lyon/30388/98/F
           RepID=Q91EJ7_9CALI
          Length = 827

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 39  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 98

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
           GDD + SV P+ AS F+     +T    K    D SD   PT  + P     FLKR F +
Sbjct: 99  GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 152

Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
              GV +A LD+T+I    YWL  ++
Sbjct: 153 TPHGV-RALLDITSITRQFYWLKANR 177

[183][TOP]
>UniRef100_Q8BDE0 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q8BDE0_9VIRU
          Length = 1904

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 161
            G  V+ +    PSG   T  +N   N + +R  +   + K              F + V 
Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750

Query: 162  LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWE 323
            ++ YGDDN+I+ +   + WFN E I     +     TD   G++ + P   TIE     +
Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805

Query: 324  LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 497
            + +LKRKF + D+   V +APL M  I     W                  G +D+ E  
Sbjct: 1806 VQYLKRKF-RYDSKRKVWEAPLSMDTILEMPNWC----------------RGGLDIQEGT 1848

Query: 498  VLNVNVALMELYLHND 545
             +N   A+MEL +H +
Sbjct: 1849 KVNCENAIMELSMHEE 1864

[184][TOP]
>UniRef100_Q0PWW7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Dandelion yellow
           mosaic virus RepID=Q0PWW7_9VIRU
          Length = 262

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
 Frame = +3

Query: 18  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGD 179
           V  +  G PSGF +TV+ NS  N   +  A+  LA    +        F++ V   VYGD
Sbjct: 126 VLSIGGGGPSGFPMTVIFNSYINLFYLMSAWSHLATDNGRVDIQHPSFFKKYVRACVYGD 185

Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
           DN++S+     SW+N  ++   L +   V +TDG   +A    +KP+    E DFLKR F
Sbjct: 186 DNIVSIKEEVISWYNLCSVSDFLKKAFGVTMTDGEKNEAHL--AKPYGKILEFDFLKRGF 243

Query: 348 L--KLDTGVIQAPLDMTAI 398
                   +  APL+  +I
Sbjct: 244 FPDSQIPSLFHAPLNKVSI 262

[185][TOP]
>UniRef100_O93123 Polyprotein (Fragment) n=1 Tax=Sapporo virus-Houston/86
           RepID=O93123_9CALI
          Length = 853

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 65  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 124

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
           GDD + SV P+ AS F+     +T    K    D SD   PT  + P     FLKR F +
Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 178

Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
              GV +A LD+T+I    YWL  ++
Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203

[186][TOP]
>UniRef100_O12155 Polymerase and capsid polyprotein (Fragment) n=1 Tax=Sapporo
           virus-Sapporo RepID=O12155_9CALI
          Length = 861

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 72  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 131

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
           GDD + SV P+ AS F+     +T    K    D SD   PT  + P     FLKR F +
Sbjct: 132 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 185

Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
              GV +A LD+T+I    YWL  ++
Sbjct: 186 TPHGV-RALLDITSITRQFYWLKANR 210

[187][TOP]
>UniRef100_C4PBJ5 Truncated polyprotein (Fragment) n=1 Tax=Sapovirus Hu/697/2005/BGD
           RepID=C4PBJ5_9CALI
          Length = 344

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
           +V    F    GLPSG   T VVNS+ + I I  A  +       P      Q   +  Y
Sbjct: 20  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 79

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
           GDD + SV P+ AS F+     +T    K    D S+   PT  + P     FLKR F +
Sbjct: 80  GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPT--NTPV----FLKRTFTQ 133

Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
              GV +A LD+T+I    YWL  ++
Sbjct: 134 TPHGV-RALLDITSITRQFYWLKANR 158

[188][TOP]
>UniRef100_Q8BDE1 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q8BDE1_9VIRU
          Length = 1904

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 16/195 (8%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 161
            G  V+ +    PSG   T  +N   N + +R  +   + K              F + V 
Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750

Query: 162  LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWE 323
            ++ YGDDN+I+ +   + WFN E I     +     TD   G++ + P   TIE     +
Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805

Query: 324  LDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELV 500
            + +LKRKF       V +APL M  I     W                  G +DV E   
Sbjct: 1806 VQYLKRKFRYDFKRKVWEAPLCMDTILEMPNWC----------------RGGLDVQEGTK 1849

Query: 501  LNVNVALMELYLHND 545
            +N   A+MEL +H +
Sbjct: 1850 VNCENAIMELSMHEE 1864

[189][TOP]
>UniRef100_Q6A1Z2 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus
           RepID=Q6A1Z2_ARMV
          Length = 236

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 24/53 (45%), Positives = 38/53 (71%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 167
           G +V++   G+PSG ALTVV+NS+FNE+L+RY ++K+ P   +  F + V L+
Sbjct: 183 GNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLV 235

[190][TOP]
>UniRef100_Q2WFL9 Polyprotein (Fragment) n=2 Tax=Sapovirus GI RepID=Q2WFL9_9CALI
          Length = 358

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
           +V    F    GLPSG   T V+NS+ + I I  A  +       P      Q   +  Y
Sbjct: 36  YVNDIKFVTRGGLPSGMPFTSVINSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 95

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
           GDD + SV P+ AS F+     +T    K    D S+   PT  + P     FLKR F +
Sbjct: 96  GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPT--NTPV----FLKRTFTQ 149

Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
              GV +A LD+T+I    YWL  ++
Sbjct: 150 TPHGV-RALLDITSITRQFYWLKANR 174

[191][TOP]
>UniRef100_B3F398 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F398_9VIRU
          Length = 137

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG +LT   N + N IL RYA+ + +P+  + RF++ V L+VYGDDN   V+ S   WF
Sbjct: 58  PSGISLTTWTNCIINSILQRYAFFR-SPRSARFRFRECVSLMVYGDDNAAGVS-SEVKWF 115

Query: 222 NGEAIRVTLAEKKVKIT 272
           N   I  +L +  ++ T
Sbjct: 116 NHTTIATSLQQCGIEYT 132

[192][TOP]
>UniRef100_Q6A2S6 Polyprotein (Fragment) n=1 Tax=Cherry leaf roll virus
           RepID=Q6A2S6_9SECO
          Length = 240

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 28/54 (51%), Positives = 38/54 (70%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
           G +V++V  GLPSG A+TV+++S+FNEILIRYAYR       + RF   V L+V
Sbjct: 187 GSQVYEVRAGLPSGCAITVIMDSIFNEILIRYAYRVSVGPILRNRFNHFVKLVV 240

[193][TOP]
>UniRef100_O36184 Nonstructural polyprotein n=1 Tax=Plautia stali intestine virus
            RepID=O36184_9VIRU
          Length = 1811

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR-----FQQTVCLIVYGD 179
            K++  +  LPSG  LT ++NS+F  I + YA+ +   K  +       F     ++ YGD
Sbjct: 1602 KLYYWSKSLPSGHFLTSIINSIFVNIAMCYAFVESQEKGNRSEENIRVFFNDFSIVTYGD 1661

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF---L 350
            D++I V       FN   +   L    +  T         I+S+   E+ F+KR F    
Sbjct: 1662 DHVIGVPEKYVEDFNQLTLPKLLKTLGLDYTMEDKDRICDIKSRKLEEVTFIKRSFRYVK 1721

Query: 351  KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 530
            +LD  +  APLD+ +I   + W               Q SGE + +     NV+ AL EL
Sbjct: 1722 ELDRWL--APLDLNSILDCMNW---------------QRSGEDEGLNAQA-NVSFALKEL 1763

Query: 531  YLH 539
             LH
Sbjct: 1764 SLH 1766

[194][TOP]
>UniRef100_B2BHW5 Non-structural polyprotein n=1 Tax=Black queen cell virus
            RepID=B2BHW5_9VIRU
          Length = 1628

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
 Frame = +3

Query: 39   LPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVYGDDNLISVAPSC 209
            LPSG  LT ++NSVF  +++   + +  PK        F +   ++ YGDD+++SV    
Sbjct: 1430 LPSGHYLTAIINSVFVNLVMCLVFMEANPKYSFTTASSFFRECGIVAYGDDHVVSVPEKY 1489

Query: 210  ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRK-----FLKLDTGVIQ 374
             S FN + + V +++  +           TIE+K   E+DFL RK     +LK +    +
Sbjct: 1490 LSVFNQQTLPVLMSKFGMFY---------TIETKDDTEIDFLSRKLEDVSYLKRNFVYDE 1540

Query: 375  ------APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
                  APL +  I     W   S+                DV+  +  N+  AL EL L
Sbjct: 1541 PRQRYIAPLSLDVILEMPMWTKSSR----------------DVVTNVFCNLEHALKELSL 1584

Query: 537  HN 542
            H+
Sbjct: 1585 HD 1586

[195][TOP]
>UniRef100_A4UVR5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR5_SDV
          Length = 319

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
 Frame = +3

Query: 144 FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWE 323
           F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+ K        P  E
Sbjct: 23  FYEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA-KSGTIKPFIPLEE 81

Query: 324 LDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 497
           +DFLKR+F+  D+G   I  PL   +I   L+++                 G  D +  L
Sbjct: 82  VDFLKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELAAL 124

Query: 498 VLNVNVALMELYLH 539
            LNV  AL E + H
Sbjct: 125 ELNVATALCEAFFH 138

[196][TOP]
>UniRef100_Q27YG9 RNA-directed RNA polymerase n=1 Tax=Nora virus RepID=POLR_NORAV
          Length = 2104

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 45/142 (31%), Positives = 64/142 (45%)
 Frame = +3

Query: 12   QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 191
            Q V+K N G  SG   T + N + N+I   YA+ K         ++Q V  + +GDD + 
Sbjct: 1896 QTVYKTNRGNKSGSYTTTIDNCLANDIYGLYAWVKTTGLRSLWDYRQNVSSVAFGDDIIK 1955

Query: 192  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
            SV+      +N    R  L      +T GS KD        F  L FLKR F KL+ G++
Sbjct: 1956 SVSDEYKDKYNYCTYRDVLNATGHIMTPGS-KDGEEKPFTSFENLQFLKRGF-KLENGMV 2013

Query: 372  QAPLDMTAIFSSLYWLTPSKDK 437
             APL   +I     W    +D+
Sbjct: 2014 LAPLLQRSIEGPFVWTDIREDQ 2035

[197][TOP]
>UniRef100_Q27J85 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Maizuru/6728/JP
           RepID=Q27J85_9CALI
          Length = 366

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 31  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 90

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
           GDD + SV P+ AS F+     +T    K    D S+   PT  + P     FLKR F +
Sbjct: 91  GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSEAIKPT--NTPV----FLKRTFTQ 144

Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
              GV +A LD+T+I    YWL  ++
Sbjct: 145 TPHGV-RALLDITSITRQFYWLKANR 169

[198][TOP]
>UniRef100_B3F392 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F392_9VIRU
          Length = 139

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = +3

Query: 42  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
           PSG  LTV++N + N + +RYAY  L        F+  V L+ YGDDN+++V     SWF
Sbjct: 59  PSGHPLTVIINGLVNSLYMRYAYTVLNEYGHCNDFKSNVNLMTYGDDNILNVNKD-ISWF 117

Query: 222 NGEAIRVTLAE 254
           N  +I   LAE
Sbjct: 118 NHTSISQALAE 128

[199][TOP]
>UniRef100_B1A455 Replication-associated polyprotein (Fragment) n=1 Tax=Black raspberry
            necrosis virus RepID=B1A455_9SECO
          Length = 983

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
 Frame = +3

Query: 15   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVCLI-VYGD 179
            +++ V  G PSGFALTV++NS+ N+  + +A+RK    ++P     R  ++ C   VYGD
Sbjct: 875  ELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMARISPSMVTYRIMRSHCTFSVYGD 934

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDG 278
            DN++S + +    +N   I   L    V ++DG
Sbjct: 935  DNVVSFSLAVRDMYNLCTIADELKTIGVTLSDG 967

[200][TOP]
>UniRef100_Q8B594 Nonstructural polyprotein n=1 Tax=Aphid lethal paralysis virus
            RepID=Q8B594_ALPV
          Length = 2035

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL---APKPEKCRFQQTVCLIVYGDDNL 188
            ++ V  G+PSG   T ++NS+ N   +  ++  +    P      F +    I YGDD +
Sbjct: 1821 IYYVRNGIPSGCPATAILNSIVNHCCLADSWLDIMDGTPYATMNSFFEHTSSIFYGDDFI 1880

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDTG 365
            +++ P     +N E +   L +          K    ++++   E+ FLKRKF  +   G
Sbjct: 1881 MNIRPEVIDVYNQETLTPVLKKNLEMTMTDEAKTGECVKARTLEEVSFLKRKFRFESFVG 1940

Query: 366  VIQAPLDMTAIFSSLYWL 419
            +  AP+D+  I  +  W+
Sbjct: 1941 LWVAPIDIDVILDAPNWV 1958

[201][TOP]
>UniRef100_Q80AG3 Non-structural polyprotein n=1 Tax=Kashmir bee virus
            RepID=Q80AG3_9VIRU
          Length = 1933

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 8/184 (4%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYR----KLAPKPEKCRFQQTVCLIVYGDDN 185
            V+ +    PSG   T  +N   N + +R  +     K A K     F + V L+ YGDDN
Sbjct: 1728 VYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATKAAVKMTMRDFSKHVSLVSYGDDN 1787

Query: 186  LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-LK 353
            +I+ +   ++W+N   I    +      TD   G   + P   S    ++ +LKRKF   
Sbjct: 1788 VINFSDEVSAWYNMSTIAEAFSTLGFTYTDELKGVRGEVPNWRS--IQDVQYLKRKFRYD 1845

Query: 354  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 533
                V +APL M  I     W                  G +D+ E   LN   A+MEL 
Sbjct: 1846 NQRKVWEAPLCMDTILEMPNWC----------------RGGLDIQEGTKLNCENAIMELS 1889

Query: 534  LHND 545
            +H +
Sbjct: 1890 MHEE 1893

[202][TOP]
>UniRef100_O56050 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
            RepID=O56050_9VIRU
          Length = 1998

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 179
            G  ++ V  G+PSG  +T  +NS+ N++ + Y +  +   P K     F +    + YGD
Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALVYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
            D ++++       FN   I   +++    +     K    ++ +   E++FLKR F   +
Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897

Query: 360  TGVIQ--APLDMTAIFSSLYW 416
            T + +  APLD+T I  S  W
Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918

[203][TOP]
>UniRef100_B3TZF0 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees
            RepID=B3TZF0_9VIRU
          Length = 1950

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDN 185
            V+ +    PSG   T  +N   N + +R  +    ++ A K     F + V ++ YGDDN
Sbjct: 1745 VYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICAKEAAVKMTMKDFGKHVSMVSYGDDN 1804

Query: 186  LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-LK 353
            +I+ +     W+N E I           TD   G++ + P   S    ++ +LKRKF   
Sbjct: 1805 VINFSDEVCEWYNMETIAKAFETLGFTYTDELKGANGEVPKWRS--IKDVQYLKRKFRYD 1862

Query: 354  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 533
                V +APL M  I     W                  G +D+ E   LN   A+MEL 
Sbjct: 1863 EQRKVWEAPLCMDTILEMPNWC----------------RGGLDIQEGTKLNCENAIMELS 1906

Query: 534  LHND 545
            +H +
Sbjct: 1907 MHEE 1910

[204][TOP]
>UniRef100_A9QXE1 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
            RepID=A9QXE1_9VIRU
          Length = 1998

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 179
            G  ++ V  G+PSG  +T  +NS+ N++ + Y +  +   P K     F +    + YGD
Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALIYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838

Query: 180  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
            D ++++       FN   I   +++    +     K    ++ +   E++FLKR F   +
Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897

Query: 360  TGVIQ--APLDMTAIFSSLYW 416
            T + +  APLD+T I  S  W
Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918

[205][TOP]
>UniRef100_Q994T0 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T0_9VIRU
          Length = 174

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSRERGQTWESFKQNVELFCY 83

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL- 350
           GDD ++SV       FN   I   LA+  +  TD ++K    +         FLK  F  
Sbjct: 84  GDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEEVVAYTTLLNSTFLKHGFRP 142

Query: 351 -KLDTGVIQAPLDMTAIFSSLYWLTPSKD 434
            ++   + Q+ L  ++I  +  W+    D
Sbjct: 143 HEVYPHLWQSALAWSSINDTTQWIWECAD 171

[206][TOP]
>UniRef100_C1JCT1 Putative nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 3
            RepID=C1JCT1_9VIRU
          Length = 2580

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
 Frame = +3

Query: 9    GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQTVCLIV 170
            G  +  V+ G+PSG   T  +NS  N+I+I  AY  +  + ++        ++  VC + 
Sbjct: 1966 GNSILLVHGGMPSGCVPTAPLNSKVNDIMIYTAYVNILRRADRGDITSYRYYRDLVCRLF 2025

Query: 171  YGDDNLISVAPSCASWFNGEAIRVTLAEKK-----VKITDGSDKD-APTIESKPFWELDF 332
            YGDD +I+V  S A  FN +    TL+E+      + +TDGS  D  P  E+     L F
Sbjct: 2026 YGDDVIIAVDDSIADIFNCQ----TLSEEMKILFGMNMTDGSKSDIIPKFET--IETLSF 2079

Query: 333  LKRKF--LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLN 506
            + R F  LK     I   L   +I +  Y+ T    + H  Q       E  + EE   N
Sbjct: 2080 ISRFFRPLKHQENFIVGALKKISIQTHFYYATDDTPE-HFGQVFKTIQEEAALWEEEYFN 2138

Query: 507  VNVALMELYLHNDPKEFQRVRSF 575
                 ++ Y+    ++F  +  F
Sbjct: 2139 ----KIQSYIQEIIRKFPEISKF 2157

[207][TOP]
>UniRef100_A5HB92 Non-structural protein n=1 Tax=Solenopsis invicta virus 2
            RepID=A5HB92_9VIRU
          Length = 2153

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
 Frame = +3

Query: 18   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQ---QTVCLIVYGDDNL 188
            +++ + G+ SGF  T  VN++ + +LI   Y  L  K     F+   + V  I+YGDD L
Sbjct: 1947 IYQKSRGIISGFPGTAEVNTLAHILLIVCIYLMLVAKTIWDSFEMFLRMVSAILYGDDIL 2006

Query: 189  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
            +++       FNG+ I+         +T  + K +  +E+KP  +  FLK  + +L  G 
Sbjct: 2007 LTIHDDILHLFNGKTIQREYERLGYTVTSAT-KSSEIVEAKPLSQCQFLKSSWRQLLPGY 2065

Query: 369  IQAPLDMTAIFSSLYWL 419
                LD+   +  ++W+
Sbjct: 2066 YIRVLDLEVAYDLVHWV 2082

[208][TOP]
>UniRef100_Q9WCE9 Polyprotein n=1 Tax=Sacbrood virus RepID=Q9WCE9_9VIRU
          Length = 2858

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 6    VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
            V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 2651 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 2710

Query: 174  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
            GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 2711 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 2749

[209][TOP]
>UniRef100_Q994U1 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994U1_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 84  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122

[210][TOP]
>UniRef100_Q994T9 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T9_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGNKERGQTWESFKQNVELFCY 83

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 84  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122

[211][TOP]
>UniRef100_Q994T5 Polyprotein (Fragment) n=3 Tax=Sacbrood virus RepID=Q994T5_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 84  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122

[212][TOP]
>UniRef100_Q994S9 Polyprotein (Fragment) n=2 Tax=Sacbrood virus RepID=Q994S9_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSRERGQTWESFKQNVELFCY 83

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 347
           GDD ++SV       FN   I   LA+  +  TD ++K    +         FLK  F
Sbjct: 84  GDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEEVVAYTTLLNSTFLKHGF 140

[213][TOP]
>UniRef100_Q80MT3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sacbrood virus
           RepID=Q80MT3_9VIRU
          Length = 186

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 31  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 90

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 91  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 129

[214][TOP]
>UniRef100_Q80MT2 RNA-dependent RNA polymerase (Fragment) n=5 Tax=Sacbrood virus
           RepID=Q80MT2_9VIRU
          Length = 186

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 6   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 28  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 87

Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 88  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 126

[215][TOP]
>UniRef100_Q1XEP0 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEP0_9SECO
          Length = 239

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 24/54 (44%), Positives = 36/54 (66%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
           G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+V
Sbjct: 186 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239

[216][TOP]
>UniRef100_Q1XEN9 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEN9_9SECO
          Length = 239

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 24/54 (44%), Positives = 36/54 (66%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
           G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+V
Sbjct: 186 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239

[217][TOP]
>UniRef100_Q1XEN8 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEN8_9SECO
          Length = 239

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 24/54 (44%), Positives = 36/54 (66%)
 Frame = +3

Query: 9   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
           G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+V
Sbjct: 186 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239