[UP]
[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 329 bits (844), Expect = 8e-89
Identities = 157/191 (82%), Positives = 173/191 (90%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
FVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDD
Sbjct: 329 FVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDD 388
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD
Sbjct: 389 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 448
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G++QAPLD +AIFSSLYWLTP K KFH Q+AS + G VDV+EEL+LNVNVALMELYLHN
Sbjct: 449 GIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELYLHN 508
Query: 543 DPKEFQRVRSF 575
DP+EF RVR F
Sbjct: 509 DPREFSRVRDF 519
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 329 bits (844), Expect = 8e-89
Identities = 157/191 (82%), Positives = 173/191 (90%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
FVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDD
Sbjct: 1769 FVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDD 1828
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD
Sbjct: 1829 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 1888
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G++QAPLD +AIFSSLYWLTP K KFH Q+AS + G VDV+EEL+LNVNVALMELYLHN
Sbjct: 1889 GIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELYLHN 1948
Query: 543 DPKEFQRVRSF 575
DP+EF RVR F
Sbjct: 1949 DPREFSRVRDF 1959
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 327 bits (837), Expect = 5e-88
Identities = 159/191 (83%), Positives = 172/191 (90%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
FVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VYGDD
Sbjct: 329 FVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDD 388
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD
Sbjct: 389 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 448
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G++QAPLD +AIFSSLYWLTP K KFH QK S + GEVDVIEEL+LNVNVALMELYLHN
Sbjct: 449 GIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHN 508
Query: 543 DPKEFQRVRSF 575
D EFQRVR F
Sbjct: 509 DVAEFQRVRGF 519
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 327 bits (837), Expect = 5e-88
Identities = 159/191 (83%), Positives = 172/191 (90%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDD 182
FVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VYGDD
Sbjct: 1771 FVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDD 1830
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE+K FWELDFLKRKFLKLD
Sbjct: 1831 NLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDN 1890
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G++QAPLD +AIFSSLYWLTP K KFH QK S + GEVDVIEEL+LNVNVALMELYLHN
Sbjct: 1891 GIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHN 1950
Query: 543 DPKEFQRVRSF 575
D EFQRVR F
Sbjct: 1951 DVAEFQRVRGF 1961
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 281 bits (720), Expect = 2e-74
Identities = 139/191 (72%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 185
VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK F VCL+VYGDDN
Sbjct: 328 VGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDN 387
Query: 186 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDT 362
LISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE+KPF ELDFLKRKF + +
Sbjct: 388 LISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEH 447
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G + APLD +AIFS L+WLTP K KF +KA Y GEVDV+EEL++NVNV+L+ELYLHN
Sbjct: 448 GQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHN 507
Query: 543 DPKEFQRVRSF 575
D +EF RVRSF
Sbjct: 508 DKEEFNRVRSF 518
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 281 bits (720), Expect = 2e-74
Identities = 139/191 (72%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDN 185
VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK F VCL+VYGDDN
Sbjct: 1754 VGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDN 1813
Query: 186 LISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDT 362
LISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE+KPF ELDFLKRKF + +
Sbjct: 1814 LISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEH 1873
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G + APLD +AIFS L+WLTP K KF +KA Y GEVDV+EEL++NVNV+L+ELYLHN
Sbjct: 1874 GQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHN 1933
Query: 543 DPKEFQRVRSF 575
D +EF RVRSF
Sbjct: 1934 DKEEFNRVRSF 1944
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 212 bits (540), Expect = 1e-53
Identities = 111/189 (58%), Positives = 135/189 (71%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P++ F V L+VYGDDNL
Sbjct: 339 GQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNL 398
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+S A +FNGE I+ TL +K V ITDGSDK AP I+ K ELDFLKR+FLKL+TGV
Sbjct: 399 MSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGV 458
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+QAPLD+TAIFS L+W+TP K Q VD + EL LNV VAL ELYLH +
Sbjct: 459 VQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNK 517
Query: 549 KEFQRVRSF 575
+EFQRVR+F
Sbjct: 518 EEFQRVRNF 526
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 212 bits (540), Expect = 1e-53
Identities = 111/189 (58%), Positives = 135/189 (71%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P++ F V L+VYGDDNL
Sbjct: 1829 GQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNL 1888
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+S A +FNGE I+ TL +K V ITDGSDK AP I+ K ELDFLKR+FLKL+TGV
Sbjct: 1889 MSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGV 1948
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+QAPLD+TAIFS L+W+TP K Q VD + EL LNV VAL ELYLH +
Sbjct: 1949 VQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNK 2007
Query: 549 KEFQRVRSF 575
+EFQRVR+F
Sbjct: 2008 EEFQRVRNF 2016
[9][TOP]
>UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA9_9SECO
Length = 985
Score = 189 bits (480), Expect = 1e-46
Identities = 98/189 (51%), Positives = 125/189 (66%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F Q VCLIVYGDDNL
Sbjct: 606 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRVTVPRPLVNNFNQEVCLIVYGDDNL 665
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
ISV P +FNG+ I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G
Sbjct: 666 ISVKPDTMKYFNGDRIKEVLAKFKVTITDGSDKNSPVLRAKPLKQLDFLKRGFKVQSDGR 725
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ AIFSSLY++ P + + + L LN VAL ELYLHND
Sbjct: 726 VLAPLDLQAIFSSLYYINP----------------QGNTLNSLFLNAQVALRELYLHNDI 769
Query: 549 KEFQRVRSF 575
++F VR+F
Sbjct: 770 EQFTAVRNF 778
[10][TOP]
>UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus
RepID=UPI00003FE53F
Length = 711
Score = 189 bits (479), Expect = 2e-46
Identities = 96/189 (50%), Positives = 127/189 (67%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNL
Sbjct: 332 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 391
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
IS+ P +FNGE I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G
Sbjct: 392 ISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 451
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ AI+SSLY++ P + ++++ L LN VAL ELYLH D
Sbjct: 452 VLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELYLHGDV 495
Query: 549 KEFQRVRSF 575
++F VR+F
Sbjct: 496 EQFTAVRNF 504
[11][TOP]
>UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA7_9SECO
Length = 985
Score = 189 bits (479), Expect = 2e-46
Identities = 96/189 (50%), Positives = 127/189 (67%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNL
Sbjct: 606 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 665
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
IS+ P +FNGE I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G
Sbjct: 666 ISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 725
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ AI+SSLY++ P + ++++ L LN VAL ELYLH D
Sbjct: 726 VLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELYLHGDV 769
Query: 549 KEFQRVRSF 575
++F VR+F
Sbjct: 770 EQFTAVRNF 778
[12][TOP]
>UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE
RASPBERRY) RepID=POL1_TORVR
Length = 2197
Score = 189 bits (479), Expect = 2e-46
Identities = 96/189 (50%), Positives = 127/189 (67%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNL
Sbjct: 1818 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 1877
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
IS+ P +FNGE I+ LA+ KV ITDGSDK++P + +KP +LDFLKR F G
Sbjct: 1878 ISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 1937
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ AI+SSLY++ P + ++++ L LN VAL ELYLH D
Sbjct: 1938 VLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELYLHGDV 1981
Query: 549 KEFQRVRSF 575
++F VR+F
Sbjct: 1982 EQFTAVRNF 1990
[13][TOP]
>UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA8_9SECO
Length = 985
Score = 188 bits (477), Expect = 3e-46
Identities = 96/189 (50%), Positives = 125/189 (66%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNL
Sbjct: 606 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 665
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
IS+ P +FNGE I+ LA KV ITDGSDK++P + +KP +LDFLKR F G
Sbjct: 666 ISIKPDTMKYFNGEQIKTILARYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 725
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ AI+SSLY++ P + +++ L LN VAL ELYLH D
Sbjct: 726 VLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELYLHGDV 769
Query: 549 KEFQRVRSF 575
++F VR+F
Sbjct: 770 EQFTAVRNF 778
[14][TOP]
>UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA6_9SECO
Length = 985
Score = 187 bits (476), Expect = 4e-46
Identities = 96/189 (50%), Positives = 125/189 (66%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVYGDDNL
Sbjct: 606 GQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNL 665
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
IS+ P +FNGE I+ LA KV ITDGSDK++P + +KP +LDFLKR F G
Sbjct: 666 ISIKPDTMKYFNGEQIKTILANIKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 725
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ AI+SSLY++ P + +++ L LN VAL ELYLH D
Sbjct: 726 VLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELYLHGDV 769
Query: 549 KEFQRVRSF 575
++F VR+F
Sbjct: 770 EQFTAVRNF 778
[15][TOP]
>UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot
virus RepID=Q155U1_9SECO
Length = 711
Score = 182 bits (462), Expect = 2e-44
Identities = 92/189 (48%), Positives = 125/189 (66%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
GQ+V++V G+PSG ALTV++NS+FNE+LI Y YR P+ F+Q VCLIVYGDDNL
Sbjct: 332 GQRVYEVRAGMPSGCALTVIINSLFNELLIGYVYRVTVPRSLVNNFKQEVCLIVYGDDNL 391
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
IS+ P +FNGE I+ TLA+ ++ ITDGSDK++P + +KP +LDFLKR F G
Sbjct: 392 ISIKPDTMKYFNGEQIKSTLAKYRITITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGR 451
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ AI+SSLY++ P + +++ L LN VAL ELYLH D
Sbjct: 452 VLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELYLHGDV 495
Query: 549 KEFQRVRSF 575
++F VR+F
Sbjct: 496 EQFTAVRNF 504
[16][TOP]
>UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud
Blight RepID=POL1_TRSVB
Length = 2304
Score = 162 bits (410), Expect = 2e-38
Identities = 93/187 (49%), Positives = 117/187 (62%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLIS 194
+VF+V G+ G ALTV++NSVFNEILIRY Y+ + P PE RF+ V L+VYGDDNLI+
Sbjct: 1833 QVFEVRGGIRRG-ALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVYGDDNLIA 1891
Query: 195 VAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVIQ 374
V PS F GE I+ TLA KK+ ITDGSDK +P +E+KP +LDFLKR FL D+G +
Sbjct: 1892 VDPSMQKIFTGEVIKKTLARKKITITDGSDKLSPVLEAKPLAQLDFLKRSFLVSDSGQVM 1951
Query: 375 APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPKE 554
LD T I+SSL +L S + D I L NV AL ELY D +E
Sbjct: 1952 PALDRTCIYSSLLYLR---------------SADCDPIPLLHQNVQNALQELYYRQDREE 1996
Query: 555 FQRVRSF 575
F +R+F
Sbjct: 1997 FDNLRTF 2003
[17][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 161 bits (408), Expect = 3e-38
Identities = 86/189 (45%), Positives = 115/189 (60%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+VYGDDNL
Sbjct: 1527 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFNEYVTLLVYGDDNL 1586
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
I+V PS FNG+ I+ T+A+ +V ITDGSDK +PT+ KP LDFLKR F D G
Sbjct: 1587 IAVDPSILEVFNGDVIKKTMAKWRVTITDGSDKLSPTLTEKPLLSLDFLKRGFKLADNGQ 1646
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD TAI+SSL+W+ DV+ L N AL+E++ H D
Sbjct: 1647 VYAPLDKTAIYSSLHWVAGRGQ---------------DVMSALKDNARSALIEMWAHQDK 1691
Query: 549 KEFQRVRSF 575
EF +RSF
Sbjct: 1692 AEFVELRSF 1700
[18][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=UPI0000163DCE
Length = 707
Score = 156 bits (394), Expect = 1e-36
Identities = 86/189 (45%), Positives = 114/189 (60%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++V G+PSG ALTV++NS+FNE LIR+ +R + RF Q V L++YGDDNL
Sbjct: 323 GARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNL 382
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
I+V P FNGE IR LA+ V ITDGSDK A IE KP +LDFLKR+F KL+ G
Sbjct: 383 IAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGT 442
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ ++++SL +T H L NV+ AL+ELYLH +
Sbjct: 443 VYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELYLHGNE 487
Query: 549 KEFQRVRSF 575
F +R F
Sbjct: 488 TWFNHLRDF 496
[19][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=POL1_BRAV
Length = 2094
Score = 156 bits (394), Expect = 1e-36
Identities = 86/189 (45%), Positives = 114/189 (60%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++V G+PSG ALTV++NS+FNE LIR+ +R + RF Q V L++YGDDNL
Sbjct: 1710 GARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNL 1769
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
I+V P FNGE IR LA+ V ITDGSDK A IE KP +LDFLKR+F KL+ G
Sbjct: 1770 IAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGT 1829
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
+ APLD+ ++++SL +T H L NV+ AL+ELYLH +
Sbjct: 1830 VYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELYLHGNE 1874
Query: 549 KEFQRVRSF 575
F +R F
Sbjct: 1875 TWFNHLRDF 1883
[20][TOP]
>UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus
RepID=POL1_GFLV
Length = 2284
Score = 154 bits (390), Expect = 4e-36
Identities = 81/189 (42%), Positives = 119/189 (62%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V+ G+PSG ALTVV+NS+F E+L+RY ++K+ P K F + V LI YGDDN+
Sbjct: 1782 GNQVYATEAGIPSGCALTVVLNSIFKELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNV 1841
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+VA S +F G+A+++ +A+ V ITDG DK TI ++P EL+FLKR F++ G+
Sbjct: 1842 FTVAQSVMQYFTGDALKMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGGM 1901
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
I APL+ +I SSL ++ S D++++L+ NVN AL+ELYLH D
Sbjct: 1902 INAPLEKLSIMSSLVYIR---------------SDGSDMLQKLLDNVNTALVELYLHGDR 1946
Query: 549 KEFQRVRSF 575
F+ VR+F
Sbjct: 1947 TYFESVRAF 1955
[21][TOP]
>UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus
RepID=UPI00003FE537
Length = 825
Score = 152 bits (385), Expect = 1e-35
Identities = 82/189 (43%), Positives = 118/189 (62%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++ G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + F + V LI YGDDN+
Sbjct: 322 GSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNV 381
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+V+ S + F G+A++ +A V ITDG DK TI ++P EL+FLKR F K + G+
Sbjct: 382 FTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGL 441
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
I APL+ +I SSL ++ S D++++LV NVN AL+ELYLH D
Sbjct: 442 IYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELYLHQDR 486
Query: 549 KEFQRVRSF 575
+ + VR F
Sbjct: 487 EYSESVRDF 495
[22][TOP]
>UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW
RepID=POL1_ARMVN
Length = 2284
Score = 152 bits (385), Expect = 1e-35
Identities = 82/189 (43%), Positives = 118/189 (62%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++ G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + F + V LI YGDDN+
Sbjct: 1781 GSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNV 1840
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+V+ S + F G+A++ +A V ITDG DK TI ++P EL+FLKR F K + G+
Sbjct: 1841 FTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGL 1900
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
I APL+ +I SSL ++ S D++++LV NVN AL+ELYLH D
Sbjct: 1901 IYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELYLHQDR 1945
Query: 549 KEFQRVRSF 575
+ + VR F
Sbjct: 1946 EYSESVRDF 1954
[23][TOP]
>UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV
Length = 2285
Score = 150 bits (379), Expect = 7e-35
Identities = 80/189 (42%), Positives = 117/189 (61%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++ G+PSG ALTVV+NS+FNE+L+RY ++K+ P + F + V LI YGDDN+
Sbjct: 1783 GNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLITYGDDNV 1842
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+V+ S F G+A++ +A V ITDG DK TI ++P EL+FLKR K + G+
Sbjct: 1843 FTVSQSIMESFTGDALKAEMANVGVTITDGKDKSLATIPARPLLELEFLKRGIKKGNGGM 1902
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDP 548
I APL+ +I SSL ++ S D++++LV NVN AL+EL+LH D
Sbjct: 1903 IYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELFLHQDK 1947
Query: 549 KEFQRVRSF 575
+ F VR+F
Sbjct: 1948 EYFDSVRNF 1956
[24][TOP]
>UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus
RepID=O37086_9SECO
Length = 2150
Score = 138 bits (347), Expect = 3e-31
Identities = 79/190 (41%), Positives = 114/190 (60%), Gaps = 1/190 (0%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G++V+ V G+PSG ALTVV+NS+FNEILIRY YRK+ P P F + V L+VYGDDNL
Sbjct: 1761 GRQVYMVRGGMPSGCALTVVINSIFNEILIRYVYRKVTPAPACNFFNKYVRLMVYGDDNL 1820
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+++ +F+G I+ +A + ITDG+DK + T+E KP L+FLKR F + G+
Sbjct: 1821 LTIKEEVIPFFDGPVIKREMASVGITITDGTDKSSLTLERKPLASLEFLKRGFRVQENGL 1880
Query: 369 IQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-ND 545
+ APLD T++++ L++L + F + NV L E+ LH N
Sbjct: 1881 VVAPLDKTSMYTRLFYLPLALMAFIPGYFSKG-------------NVKSFLEEIVLHPNH 1927
Query: 546 PKEFQRVRSF 575
+EF RVR+F
Sbjct: 1928 RREFYRVRNF 1937
[25][TOP]
>UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO
Length = 1858
Score = 134 bits (337), Expect = 5e-30
Identities = 75/190 (39%), Positives = 115/190 (60%), Gaps = 5/190 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 179
+V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+ YGD
Sbjct: 1479 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGD 1538
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
DNLISV+ A+ FNG ++ +A+ V ITDG DK +PT+E + DFLKR F KL+
Sbjct: 1539 DNLISVSHVVANVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLN 1597
Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
V +P + +++++ L+++ + +D E ++N+N L ELY+H
Sbjct: 1598 GLVYDSPEEKSSLWAQLHYVNTT---------------SLDKQEAYLVNLNNVLKELYMH 1642
Query: 540 NDPKEFQRVR 569
+ P+E +R
Sbjct: 1643 S-PEEMNMIR 1651
[26][TOP]
>UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus
RepID=UPI0000163D09
Length = 711
Score = 132 bits (331), Expect = 2e-29
Identities = 74/190 (38%), Positives = 115/190 (60%), Gaps = 5/190 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 179
+V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+ YGD
Sbjct: 332 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGD 391
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
DNLISV+ AS FNG ++ +A+ V ITDG DK +PT+E + DFLKR F KL+
Sbjct: 392 DNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLN 450
Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
+ +P + +++++ L+++ + +D E ++N+N L ELY++
Sbjct: 451 GLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNVLKELYMY 495
Query: 540 NDPKEFQRVR 569
+ P+E +R
Sbjct: 496 S-PEEMNMLR 504
[27][TOP]
>UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO
Length = 1858
Score = 132 bits (331), Expect = 2e-29
Identities = 74/190 (38%), Positives = 115/190 (60%), Gaps = 5/190 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGD 179
+V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+ YGD
Sbjct: 1479 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGD 1538
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
DNLISV+ AS FNG ++ +A+ V ITDG DK +PT+E + DFLKR F KL+
Sbjct: 1539 DNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLN 1597
Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
+ +P + +++++ L+++ + +D E ++N+N L ELY++
Sbjct: 1598 GLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNVLKELYMY 1642
Query: 540 NDPKEFQRVR 569
+ P+E +R
Sbjct: 1643 S-PEEMNMLR 1651
[28][TOP]
>UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO
Length = 2366
Score = 127 bits (320), Expect = 5e-28
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++V G+PSGFALTV NS+FNEIL+R AYR L P E+ F V LIVYGDDN+
Sbjct: 1886 GSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPDIERPFFSNNVVLIVYGDDNV 1945
Query: 189 ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWELDFLKRKFLK-LDT 362
+ + P+ S FNG I+ + E+ +KITDG+DK +P I+++P + +FLKR + K
Sbjct: 1946 LGIHPNIESVFNGNTIKAYMKEELGIKITDGADKLSPVIDARPLEQCEFLKRTWRKDRQY 2005
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G+ +APL T+IFS L ++ + Y + +++ NV +L E LH
Sbjct: 2006 GLYRAPLVETSIFSCLRYV-----------RLQNYDWQAPLLQ----NVQGSLYEASLHG 2050
Query: 543 DPKEFQRV 566
P+ R+
Sbjct: 2051 -PEMHDRI 2057
[29][TOP]
>UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain
cherry RepID=POL1_RRVC
Length = 2367
Score = 126 bits (316), Expect = 1e-27
Identities = 67/139 (48%), Positives = 96/139 (69%), Gaps = 2/139 (1%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++V G+PSGFALTV NS+FNEIL+R AYR L P+ E+ F V LIVYGDDN+
Sbjct: 1887 GSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVVLIVYGDDNV 1946
Query: 189 ISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWELDFLKRKFLK-LDT 362
+ + P+ S FNG AI+ + E+ +KITDG+DK +P I ++P + +FLKR + K
Sbjct: 1947 LGIHPNIESAFNGNAIKAYMKEELGIKITDGADKLSPVICARPLEQCEFLKRTWRKDRQY 2006
Query: 363 GVIQAPLDMTAIFSSLYWL 419
G+ +APL T+I+S L ++
Sbjct: 2007 GLYRAPLVETSIYSCLRYV 2025
[30][TOP]
>UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring
virus RepID=B4ZF31_9SECO
Length = 73
Score = 125 bits (313), Expect = 3e-27
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +3
Query: 45 SGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFN 224
SGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VYGDDNLISV+PS ASWF
Sbjct: 1 SGFALTVVVNSVFNEILIRYAYKKLAPVPERNRFGSTVCLLVYGDDNLISVSPSIASWFT 60
Query: 225 GEAIRVTLAEKK 260
GEAIR+TLAEKK
Sbjct: 61 GEAIRITLAEKK 72
[31][TOP]
>UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus
RepID=UPI0000163CF4
Length = 710
Score = 124 bits (310), Expect = 7e-27
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
+++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYGDD
Sbjct: 332 IWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDD 391
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++
Sbjct: 392 NLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSN 451
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
+ AP D +++S L++++ +++ E ++N+ L ELYLH+
Sbjct: 452 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 496
Query: 543 DPKEFQRVR 569
P+E +R+R
Sbjct: 497 -PEEARRLR 504
[32][TOP]
>UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain
Kentucky G7) RepID=POL1_BPMV
Length = 1850
Score = 124 bits (310), Expect = 7e-27
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
+++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYGDD
Sbjct: 1472 IWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDD 1531
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++
Sbjct: 1532 NLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSN 1591
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
+ AP D +++S L++++ +++ E ++N+ L ELYLH+
Sbjct: 1592 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1636
Query: 543 DPKEFQRVR 569
P+E +R+R
Sbjct: 1637 -PEEARRLR 1644
[33][TOP]
>UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO
Length = 1851
Score = 123 bits (308), Expect = 1e-26
Identities = 71/191 (37%), Positives = 111/191 (58%), Gaps = 5/191 (2%)
Frame = +3
Query: 12 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYG 176
+ V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYG
Sbjct: 1471 KNVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYG 1530
Query: 177 DDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKL 356
DDNLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++
Sbjct: 1531 DDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQM 1590
Query: 357 DTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
+ AP D +++S L++++ +++ E ++N+ L ELYL
Sbjct: 1591 SNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYL 1635
Query: 537 HNDPKEFQRVR 569
H+ P+E +++R
Sbjct: 1636 HS-PEEARQLR 1645
[34][TOP]
>UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO
Length = 1851
Score = 121 bits (303), Expect = 4e-26
Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 5/189 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V L VYGDD
Sbjct: 1473 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDD 1532
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G ++ LA + ITDG DK + T++ + + DFLKR F ++
Sbjct: 1533 NLISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSN 1592
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
+ AP D +++S L++++ +++ E ++N+ L ELYLH+
Sbjct: 1593 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1637
Query: 543 DPKEFQRVR 569
P+E +++R
Sbjct: 1638 -PEEARQLR 1645
[35][TOP]
>UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO
Length = 1851
Score = 121 bits (303), Expect = 4e-26
Identities = 71/189 (37%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + L VYGDD
Sbjct: 1473 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGDD 1532
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G ++ LA + ITDG DK + T++ + E DFLKR F ++
Sbjct: 1533 NLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSN 1592
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
+ AP D +++S L++++ +++ E ++N+ L ELYLH+
Sbjct: 1593 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1637
Query: 543 DPKEFQRVR 569
P+E ++R
Sbjct: 1638 -PEEACQLR 1645
[36][TOP]
>UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle
virus RepID=POL1_APMV
Length = 729
Score = 120 bits (301), Expect = 7e-26
Identities = 71/189 (37%), Positives = 111/189 (58%), Gaps = 5/189 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK----PEKCR-FQQTVCLIVYGDD 182
V++V G+PSGF LTVV+N +FNE+L+RY ++K+ + P +C F + +VYGDD
Sbjct: 357 VWRVEGGIPSGFPLTVVMNGIFNELLVRYCFKKIMREGGATPLECSAFDSYIRFVVYGDD 416
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+P FNG+ ++ +A V ITDG DK PT+E +P + DFLKR F++
Sbjct: 417 NLISVSPVIHDKFNGKLLKECMARFGVTITDGKDKTLPTLEFRPLEDCDFLKRGFIQRSE 476
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
V AP + +++++ L++++ Y+G + VNV + ELY+H+
Sbjct: 477 LVWDAPEERSSLYTQLHYVSTKMQSLE-----DAYTGNL---------VNV-IRELYMHS 521
Query: 543 DPKEFQRVR 569
PKE +R
Sbjct: 522 -PKEASDLR 529
[37][TOP]
>UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO
Length = 1851
Score = 119 bits (299), Expect = 1e-25
Identities = 70/189 (37%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V L VYGDD
Sbjct: 1473 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDD 1532
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
N ISV +F+G ++ LA + ITDG DK + T++ + + DFLKR F ++
Sbjct: 1533 NFISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSN 1592
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
+ AP D +++S L++++ +++ E ++N+ L ELYLH+
Sbjct: 1593 VLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNVLRELYLHS 1637
Query: 543 DPKEFQRVR 569
P+E +++R
Sbjct: 1638 -PEEARQLR 1645
[38][TOP]
>UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus
RepID=UPI0000163D14
Length = 711
Score = 119 bits (298), Expect = 2e-25
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + L+ YGDD
Sbjct: 332 VWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDD 391
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G+ ++ +LA+ V ITDG DK + + + E DFLKR F++ +
Sbjct: 392 NLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSS 451
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
+ AP D +++S L+++ + +K Y + NV L ELY+H+
Sbjct: 452 TIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNVLRELYMHS 496
Query: 543 --DPKEFQR 563
+ EF+R
Sbjct: 497 PREATEFRR 505
[39][TOP]
>UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus
RepID=POL1_CPMV
Length = 1866
Score = 119 bits (298), Expect = 2e-25
Identities = 72/189 (38%), Positives = 110/189 (58%), Gaps = 7/189 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + L+ YGDD
Sbjct: 1487 VWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDD 1546
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G+ ++ +LA+ V ITDG DK + + + E DFLKR F++ +
Sbjct: 1547 NLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSS 1606
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
+ AP D +++S L+++ + +K Y + NV L ELY+H+
Sbjct: 1607 TIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNVLRELYMHS 1651
Query: 543 --DPKEFQR 563
+ EF+R
Sbjct: 1652 PREATEFRR 1660
[40][TOP]
>UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus
RepID=UPI0000163D04
Length = 713
Score = 113 bits (283), Expect = 9e-24
Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L AP F+ + ++ YGDD
Sbjct: 333 VWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDD 392
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G ++ +A + ITDG DK + T+E + + DFLKR FLK +
Sbjct: 393 NLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSS 452
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 527
+ AP + ++++ L+++ + + + + + V+V+ EL ++ ++E
Sbjct: 453 VLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 503
[41][TOP]
>UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus
RepID=POL1_RCMV
Length = 1864
Score = 113 bits (283), Expect = 9e-24
Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 5/175 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L AP F+ + ++ YGDD
Sbjct: 1484 VWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDD 1543
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV +F+G ++ +A + ITDG DK + T+E + + DFLKR FLK +
Sbjct: 1544 NLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSS 1603
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 527
+ AP + ++++ L+++ + + + + + V+V+ EL ++ ++E
Sbjct: 1604 VLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 1654
[42][TOP]
>UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus
RepID=UPI0000163CFC
Length = 712
Score = 112 bits (279), Expect = 3e-23
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGD 179
+V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ P F V ++ YGD
Sbjct: 330 EVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGD 389
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
DNL+SV + F+G ++ L + ITDG DK +P + + + DFLKR F K
Sbjct: 390 DNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKES 449
Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
V P + ++++ L+++T + + H E ++NV + ELYLH
Sbjct: 450 DVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNVIRELYLH 494
Query: 540 NDPKEFQRVR 569
DP+E +R
Sbjct: 495 -DPREAAELR 503
[43][TOP]
>UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus
(strain DG) RepID=POL1_CPSMV
Length = 1858
Score = 112 bits (279), Expect = 3e-23
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGD 179
+V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ P F V ++ YGD
Sbjct: 1476 EVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGD 1535
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
DNL+SV + F+G ++ L + ITDG DK +P + + + DFLKR F K
Sbjct: 1536 DNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKES 1595
Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
V P + ++++ L+++T + + H E ++NV + ELYLH
Sbjct: 1596 DVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNVIRELYLH 1640
Query: 540 NDPKEFQRVR 569
DP+E +R
Sbjct: 1641 -DPREAAELR 1649
[44][TOP]
>UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus
RepID=Q06RG7_9SECO
Length = 396
Score = 111 bits (278), Expect = 3e-23
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V ++ YGDD
Sbjct: 134 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDD 193
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K
Sbjct: 194 NLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKN 253
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G+ AP + ++++ L+++ + + H K + V+V+ EL +
Sbjct: 254 GIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 297
[45][TOP]
>UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO
Length = 1857
Score = 111 bits (278), Expect = 3e-23
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V ++ YGDD
Sbjct: 1478 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDD 1537
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K
Sbjct: 1538 NLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKN 1597
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G+ AP + ++++ L+++ + + H K + V+V+ EL +
Sbjct: 1598 GIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1641
[46][TOP]
>UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO
Length = 1860
Score = 111 bits (278), Expect = 3e-23
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V ++ YGDD
Sbjct: 1481 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDD 1540
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K
Sbjct: 1541 NLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKN 1600
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G+ AP + ++++ L+++ + + H K + V+V+ EL +
Sbjct: 1601 GIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644
[47][TOP]
>UniRef100_B9UKJ7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cocoa necrosis
virus RepID=B9UKJ7_9SECO
Length = 76
Score = 111 bits (277), Expect = 5e-23
Identities = 53/68 (77%), Positives = 61/68 (89%)
Frame = +3
Query: 84 NEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKV 263
+EILIRYAY+KLAPKP++ F +VCL+VYGDDNLISV+PS ASWF GEAIRV LAEKK+
Sbjct: 9 HEILIRYAYKKLAPKPQRNLFGVSVCLLVYGDDNLISVSPSIASWFTGEAIRVCLAEKKI 68
Query: 264 KITDGSDK 287
KITDGSDK
Sbjct: 69 KITDGSDK 76
[48][TOP]
>UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus
RepID=UPI000180D482
Length = 474
Score = 108 bits (270), Expect = 3e-22
Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAYR R F V L+VYGDDNLI
Sbjct: 296 LYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLI 355
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S FNGE + + +TDG DK I + + DFLKR F L G
Sbjct: 356 SVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEW 415
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
P+ +++ L+++ K +++ + V N+N L EL+LH
Sbjct: 416 VGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRELWLH 456
[49][TOP]
>UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO
Length = 1853
Score = 108 bits (270), Expect = 3e-22
Identities = 64/176 (36%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAYR R F V L+VYGDDNLI
Sbjct: 1481 LYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLI 1540
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S FNGE + + +TDG DK I + + DFLKR F L G
Sbjct: 1541 SVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEW 1600
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
P+ +++ L+++ K +++ + V N+N L EL+LH
Sbjct: 1601 VGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRELWLH 1641
[50][TOP]
>UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus
RepID=Q2TCK2_9SECO
Length = 709
Score = 107 bits (268), Expect = 5e-22
Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGDD
Sbjct: 335 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDD 394
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA ++ ITDG DK +P ++ + + DFLKR F +
Sbjct: 395 NLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNR 452
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G+ AP + ++++ L+++ + + H K + V V+ EL +
Sbjct: 453 GLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 496
[51][TOP]
>UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO
Length = 1853
Score = 107 bits (268), Expect = 5e-22
Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGDD
Sbjct: 1479 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDD 1538
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA ++ ITDG DK +P ++ + + DFLKR F +
Sbjct: 1539 NLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNR 1596
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G+ AP + ++++ L+++ + + H K + V V+ EL +
Sbjct: 1597 GLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640
[52][TOP]
>UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO
Length = 1860
Score = 107 bits (267), Expect = 7e-22
Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++ YGDD
Sbjct: 1481 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDD 1540
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K +
Sbjct: 1541 NLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRS 1600
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G +P + ++++ L+++ + + H K + V+V+ EL +
Sbjct: 1601 GFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644
[53][TOP]
>UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot
virus RepID=B2KL92_9SECO
Length = 712
Score = 107 bits (267), Expect = 7e-22
Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++ YGDD
Sbjct: 333 VWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDD 392
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLKR F K +
Sbjct: 393 NLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRS 452
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G +P + ++++ L+++ + + H K + V+V+ EL +
Sbjct: 453 GFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 496
[54][TOP]
>UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO
Length = 1853
Score = 107 bits (266), Expect = 9e-22
Identities = 62/168 (36%), Positives = 100/168 (59%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDD 182
V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGDD
Sbjct: 1479 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMIPVSFDEYVSMVVYGDD 1538
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV+ +F+G+ ++ LA + ITDG DK +P ++ + + DFLKR F +
Sbjct: 1539 NLLSVSEVIKPYFDGKRLKDFLATLHITITDGKDKTSPFLQFRRLEDCDFLKRGF--KNR 1596
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G+ AP D ++++ L+++ + + H K + V V+ EL +
Sbjct: 1597 GLYWDAPEDKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640
[55][TOP]
>UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO
Length = 1853
Score = 106 bits (264), Expect = 1e-21
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 4/186 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YA+R R F V L+VYGDDNLI
Sbjct: 1481 LYRVENGIPSGFPLTVIVNSILNEILVKYAFRMCFADNPMVRESFDTHVSLVVYGDDNLI 1540
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + ++ FNGE + + + +TDG DK I + + DFLKR F L G
Sbjct: 1541 SVSDAISAKFNGEFLVDFFLKLSITVTDGVDKTKKGISFRRLADCDFLKRGFKNLPDGEW 1600
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH--ND 545
P+ +++ L+++ K +++ + V N+N L EL+LH N+
Sbjct: 1601 IGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRELWLHSANE 1645
Query: 546 PKEFQR 563
E +R
Sbjct: 1646 ATELRR 1651
[56][TOP]
>UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1
RepID=UPI0000231CC7
Length = 699
Score = 105 bits (262), Expect = 2e-21
Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDD 182
G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V ++VYGDD
Sbjct: 329 GRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDD 388
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+ + +S FNG + + +K+TDG DK IE + + DFLKRKF +
Sbjct: 389 NLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENAD 448
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G + ++ L+++ K V++ E + N N L EL+L +
Sbjct: 449 GTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRELWLGS 493
Query: 543 DPK 551
K
Sbjct: 494 PEK 496
[57][TOP]
>UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2
RepID=UPI0000163DDB
Length = 697
Score = 105 bits (262), Expect = 2e-21
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTVVVNS+ NEIL++YAY A P + F V ++VYGDDNLI
Sbjct: 330 LYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLI 389
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 390 SVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTW 449
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
+ P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 450 RCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRELWLHDVAE 494
Query: 546 PKEFQ 560
KEF+
Sbjct: 495 AKEFR 499
[58][TOP]
>UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO
Length = 1869
Score = 105 bits (262), Expect = 2e-21
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTVVVNS+ NEIL++YAY A P + F V ++VYGDDNLI
Sbjct: 1502 LYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLI 1561
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 1562 SVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTW 1621
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
+ P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 1622 RCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRELWLHDVAE 1666
Query: 546 PKEFQ 560
KEF+
Sbjct: 1667 AKEFR 1671
[59][TOP]
>UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1
Length = 1842
Score = 105 bits (262), Expect = 2e-21
Identities = 66/183 (36%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDD 182
G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V ++VYGDD
Sbjct: 1472 GRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDD 1531
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+ + +S FNG + + +K+TDG DK IE + + DFLKRKF +
Sbjct: 1532 NLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENAD 1591
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G + ++ L+++ K V++ E + N N L EL+L +
Sbjct: 1592 GTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRELWLGS 1636
Query: 543 DPK 551
K
Sbjct: 1637 PEK 1639
[60][TOP]
>UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO
Length = 1870
Score = 104 bits (260), Expect = 4e-21
Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 1562
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 1563 SVSDAISSRFDGNFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1622
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPK 551
++P+ +++ L+++ K +++ E + N N L EL+LH D K
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLH-DVK 1666
Query: 552 EFQRVRS 572
E + R+
Sbjct: 1667 EAEEFRN 1673
[61][TOP]
>UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO
Length = 1853
Score = 104 bits (260), Expect = 4e-21
Identities = 61/168 (36%), Positives = 99/168 (58%), Gaps = 6/168 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDD 182
V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V ++VYGDD
Sbjct: 1479 VWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMISVSFDEYVSMVVYGDD 1538
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NL+SV +F+G+ ++ LA + ITDG DK +P ++ + + DFLKR F +
Sbjct: 1539 NLLSVNEVIKPYFDGKRLKEFLATLHITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNR 1596
Query: 363 GVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 503
G+ AP + ++++ L+++ + + H K + V V+ EL +
Sbjct: 1597 GLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640
[62][TOP]
>UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus
RepID=UPI0000163DD4
Length = 699
Score = 104 bits (259), Expect = 6e-21
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 332 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 391
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 392 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 451
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
++P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 452 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 496
Query: 546 PKEFQ 560
KEF+
Sbjct: 497 AKEFR 501
[63][TOP]
>UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO
Length = 1870
Score = 104 bits (259), Expect = 6e-21
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 1562
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 1563 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1622
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
++P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 1667
Query: 546 PKEFQ 560
KEF+
Sbjct: 1668 AKEFR 1672
[64][TOP]
>UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO
Length = 1769
Score = 104 bits (259), Expect = 6e-21
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 1402 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPNVQSNFDAHVSMVVYGDDNLI 1461
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 1462 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1521
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
++P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 1522 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVRE 1566
Query: 546 PKEFQ 560
KEF+
Sbjct: 1567 AKEFR 1571
[65][TOP]
>UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO
Length = 1870
Score = 104 bits (259), Expect = 6e-21
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 1562
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 1563 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTW 1622
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
++P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 1667
Query: 546 PKEFQ 560
KEF+
Sbjct: 1668 AKEFR 1672
[66][TOP]
>UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt
virus 2 RepID=B8Y619_9SECO
Length = 594
Score = 104 bits (259), Expect = 6e-21
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 227 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFGDNPSVQSNFDAHVSMVVYGDDNLI 286
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 287 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTW 346
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
++P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 347 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILCELWLHDVKE 391
Query: 546 PKEFQ 560
KEF+
Sbjct: 392 AKEFR 396
[67][TOP]
>UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1
Length = 1842
Score = 103 bits (258), Expect = 7e-21
Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 2/183 (1%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDD 182
G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V + VYGDD
Sbjct: 1472 GRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTHVAMAVYGDD 1531
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
NLISV+ + +S FNG + +A +K+TDG DK IE + DFLKR+F +
Sbjct: 1532 NLISVSEAISSRFNGNFLVNFMANLGIKVTDGVDKTKIGIEFRTIENCDFLKRRFKENTD 1591
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 542
G + ++ L+++ K V++ E + N N L EL+L +
Sbjct: 1592 GTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRELWLED 1636
Query: 543 DPK 551
K
Sbjct: 1637 PGK 1639
[68][TOP]
>UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO
Length = 1869
Score = 103 bits (256), Expect = 1e-20
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKP-EKCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 1502 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFVDNPIVQSNFDAHVSMVVYGDDNLI 1561
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 1562 SVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKLNPDGTW 1621
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
++P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 1622 RSPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRELWLHDVIE 1666
Query: 546 PKEFQ 560
KEF+
Sbjct: 1667 AKEFR 1671
[69][TOP]
>UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO
Length = 280
Score = 102 bits (254), Expect = 2e-20
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++VYGDDNLI
Sbjct: 108 LYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLI 167
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 168 SVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTW 227
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPK 551
++P+ +++ L+++ K +++ E + N N L EL+LH D K
Sbjct: 228 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLH-DVK 271
Query: 552 E 554
E
Sbjct: 272 E 272
[70][TOP]
>UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus
RepID=Q3YC01_9SECO
Length = 795
Score = 97.8 bits (242), Expect = 5e-19
Identities = 53/151 (35%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP------EKCRFQQTVCLIV 170
G+ ++KV+CG+PSGF+LTV+VNS+ NE +R+A++++ + + V V
Sbjct: 432 GRNLYKVSCGIPSGFSLTVIVNSLVNEFFLRFAWKRIVRASLGEAFVHRSIMDREVHFAV 491
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDG---SDKDAPTIESKPFWELDFLKR 341
YGDDNL+SV+ +S +N +I L E+ V + +G ++D P P DFLKR
Sbjct: 492 YGDDNLVSVSDKYSSLYNLVSISSFLRERGVVLKNGQCKDEEDFPPFSPSPS-TCDFLKR 550
Query: 342 KFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 434
+F+ +G + APLD +++ +W+ S+D
Sbjct: 551 RFVLGSSGRVLAPLDKSSLLGCAHWVRKSQD 581
[71][TOP]
>UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO
Length = 1870
Score = 96.7 bits (239), Expect = 1e-18
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLI 191
+++V G+PSGF LTV+ NS+ NEIL++YAY P + F V + YGDDNLI
Sbjct: 1503 LYRVENGIPSGFPLTVIGNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMEEYGDDNLI 1562
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ + +S F+G + + +K+TDG DK IE + DFLKR F G
Sbjct: 1563 SVSDAISSKFDGSFLVSFIEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTW 1622
Query: 372 QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--D 545
++P+ +++ L+++ K +++ E + N N L EL+LH+ +
Sbjct: 1623 RSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRELWLHDVKE 1667
Query: 546 PKEFQ 560
KEF+
Sbjct: 1668 AKEFR 1672
[72][TOP]
>UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO
Length = 2158
Score = 92.4 bits (228), Expect = 2e-17
Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + V
Sbjct: 1435 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 1494
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
YGDDNL++V P W+ AI L V I +G DK+ SK EL FL R
Sbjct: 1495 YGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRG 1553
Query: 345 FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
F + G +QAPL +I +YW+ PS + T + + + G V E+L
Sbjct: 1554 FKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKL 1612
Query: 498 VLNVNVALME 527
V +V AL E
Sbjct: 1613 VTDVQNALKE 1622
[73][TOP]
>UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO
Length = 2158
Score = 92.0 bits (227), Expect = 3e-17
Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + V
Sbjct: 1435 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 1494
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
YGDDNL++V P W+ AI L V I +G DK+ SK EL FL R
Sbjct: 1495 YGDDNLVAV-PMELHWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRG 1553
Query: 345 FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
F + G +QAPL +I +YW+ PS + T + + + G V E+L
Sbjct: 1554 FKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKL 1612
Query: 498 VLNVNVALME 527
V +V AL E
Sbjct: 1613 VTDVQNALKE 1622
[74][TOP]
>UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU
Length = 2155
Score = 86.7 bits (213), Expect = 1e-15
Identities = 64/190 (33%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + V
Sbjct: 1438 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPHDFNQLFVAV 1497
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKRK 344
YGDDNL++V P W++ I L V I +G DK D ++ + EL FL R
Sbjct: 1498 YGDDNLVAV-PLHLQWYSLPNIAQELDMVNVVIKNGLDKSMDVNEVQFQDLSELTFLSRG 1556
Query: 345 FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
F + G APL +I +YW+ P+ + T + + + G+V E+L
Sbjct: 1557 FKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDAQAMMENVETGIREAFHHGQV-AYEKL 1615
Query: 498 VLNVNVALME 527
V +V AL E
Sbjct: 1616 VADVQEALNE 1625
[75][TOP]
>UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO
Length = 2151
Score = 86.7 bits (213), Expect = 1e-15
Identities = 65/191 (34%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLI 167
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P + F Q + +
Sbjct: 1436 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIA 1494
Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 341
VYGDDNL++V P W++ I L V I +G DK D ++ + EL FL R
Sbjct: 1495 VYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSR 1553
Query: 342 KFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEE 494
F + G APL +I +YW+ P+ + T + + + G V ++
Sbjct: 1554 GFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDK 1612
Query: 495 LVLNVNVALME 527
LVL+V AL E
Sbjct: 1613 LVLDVQTALDE 1623
[76][TOP]
>UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus
RepID=UPI000043F357
Length = 707
Score = 85.1 bits (209), Expect = 3e-15
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Frame = +3
Query: 27 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQTVCLIVYGDDNL 188
V G+PSGF LTV+VNS+ N I ++Y KL + E F+Q V YGDDNL
Sbjct: 343 VTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNL 402
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
+SV FN I LAE V + +G+DK+ + P ++DFLKRKF+ G
Sbjct: 403 VSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-G 461
Query: 366 VIQAPLDMTAIFSSLYWL 419
+ APL+ I L+W+
Sbjct: 462 HVVAPLNPVNITERLHWI 479
[77][TOP]
>UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV
Length = 2250
Score = 85.1 bits (209), Expect = 3e-15
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Frame = +3
Query: 27 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQTVCLIVYGDDNL 188
V G+PSGF LTV+VNS+ N I ++Y KL + E F+Q V YGDDNL
Sbjct: 1886 VTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNL 1945
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
+SV FN I LAE V + +G+DK+ + P ++DFLKRKF+ G
Sbjct: 1946 VSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-G 2004
Query: 366 VIQAPLDMTAIFSSLYWL 419
+ APL+ I L+W+
Sbjct: 2005 HVVAPLNPVNITERLHWI 2022
[78][TOP]
>UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV
Length = 2235
Score = 85.1 bits (209), Expect = 3e-15
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Frame = +3
Query: 27 VNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQTVCLIVYGDDNL 188
V G+PSGF LTV+VNS+ N I ++Y KL + E F+Q V YGDDNL
Sbjct: 1871 VTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNL 1930
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
+SV FN I LAE V + +G+DK+ + P ++DFLKRKF+ G
Sbjct: 1931 VSVNDVITERFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-G 1989
Query: 366 VIQAPLDMTAIFSSLYWL 419
+ APL+ I L+W+
Sbjct: 1990 HVVAPLNPVNITERLHWI 2007
[79][TOP]
>UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus
RepID=A0N0G3_9VIRU
Length = 1943
Score = 84.3 bits (207), Expect = 6e-15
Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 20/191 (10%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLI 167
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P + F Q + +
Sbjct: 1228 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIA 1286
Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 341
VYGDDNL++V P W++ I L V I +G DK D ++ + EL FL R
Sbjct: 1287 VYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSR 1345
Query: 342 KFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEE 494
F + G APL +I +YW+ P+ + T + + + G V ++
Sbjct: 1346 GFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDK 1404
Query: 495 LVLNVNVALME 527
LV +V AL E
Sbjct: 1405 LVSDVQTALDE 1415
[80][TOP]
>UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus
RepID=UPI0000164A53
Length = 709
Score = 83.6 bits (205), Expect = 1e-14
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Frame = +3
Query: 27 VNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNL 188
V G+PSGF LTV+VNS+ N + +AY KL + + K F+ V VYGDDNL
Sbjct: 343 VTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNL 402
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
ISV + FN I L E V + +G+DK+ + P ++DFLKR+F L G
Sbjct: 403 ISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-G 461
Query: 366 VIQAPLDMTAIFSSLYWL 419
I APL+ I L+W+
Sbjct: 462 HIVAPLNTVNITERLHWV 479
[81][TOP]
>UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus
RepID=Q9JGP2_9SECO
Length = 2079
Score = 83.6 bits (205), Expect = 1e-14
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 7/138 (5%)
Frame = +3
Query: 27 VNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNL 188
V G+PSGF LTV+VNS+ N + +AY KL + + K F+ V VYGDDNL
Sbjct: 1713 VTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNL 1772
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIES-KPFWELDFLKRKFLKLDTG 365
ISV + FN I L E V + +G+DK+ + P ++DFLKR+F L G
Sbjct: 1773 ISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-G 1831
Query: 366 VIQAPLDMTAIFSSLYWL 419
I APL+ I L+W+
Sbjct: 1832 HIVAPLNTVNITERLHWV 1849
[82][TOP]
>UniRef100_Q769F2 RNA dependent RNA polymerase (Fragment) n=1 Tax=Satsuma dwarf virus
RepID=Q769F2_SDV
Length = 374
Score = 83.6 bits (205), Expect = 1e-14
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
+++++ G PSGFA TV++NSV NE +++++ + A + C F + + VYGD
Sbjct: 30 LYEIHGGTPSGFAPTVMLNSVVNEFYLKWSWMGIMREAGYAKEASLCAFHEATEISVYGD 89
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL-KL 356
DN +SVA AS +N + I L+ VK+ DG+ K P E+DFLKRKF+
Sbjct: 90 DNFVSVATPVASLYNLKTISEFLSRVGVKLGDGA-KSGTIKPFIPLEEVDFLKRKFVADS 148
Query: 357 DTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
+ I PL+ +I L+++ G D I L LN+ AL E +
Sbjct: 149 KSTAILCPLNKRSIEERLFYV----------------RGGQDEIAALELNIATALCEAFF 192
Query: 537 H 539
H
Sbjct: 193 H 193
[83][TOP]
>UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO
Length = 2163
Score = 83.2 bits (204), Expect = 1e-14
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVCLI-VYGD 179
+++ V G PSGFALTV++NS+ N+ + +A+RK ++P R +T C VYGD
Sbjct: 1616 ELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMSRISPSMVTYRVMRTHCTFSVYGD 1675
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
DN++S + + +N I L V ++DG K I+ F +LDFLKR++ +L+
Sbjct: 1676 DNVVSFSLAVRDMYNLCTIADELKTIGVTLSDGK-KTGVLIKWTGFKDLDFLKRRW-ELE 1733
Query: 360 TG-VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
G + PLD AI L+W+ S+D +E L N ALME +
Sbjct: 1734 PGHGFKCPLDKMAIEERLFWVRKSEDN----------------MESLDDNCYSALMEAF- 1776
Query: 537 HNDPKEFQRVR 569
H+ P+ F +R
Sbjct: 1777 HHGPEYFHDLR 1787
[84][TOP]
>UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus
RepID=UPI0000164A61
Length = 694
Score = 82.0 bits (201), Expect = 3e-14
Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVCLI-VYGDD 182
+++V G PSGFALTV++NSV N+ + +A+RK+ P R ++ C VYGDD
Sbjct: 335 LYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDD 394
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
N++S + +N I L V ++DG K ++ F ELDFLKR+++
Sbjct: 395 NVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSG 453
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH- 539
PL +AI L+W+ S+D +E L N ALME + H
Sbjct: 454 QGFLCPLHKSAIEERLFWVRSSEDS----------------VETLDDNCYSALMEAFHHG 497
Query: 540 NDPKEFQRVR 569
D F R R
Sbjct: 498 RDYFNFLRAR 507
[85][TOP]
>UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO
Length = 1915
Score = 82.0 bits (201), Expect = 3e-14
Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVCLI-VYGDD 182
+++V G PSGFALTV++NSV N+ + +A+RK+ P R ++ C VYGDD
Sbjct: 1556 LYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDD 1615
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
N++S + +N I L V ++DG K ++ F ELDFLKR+++
Sbjct: 1616 NVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSG 1674
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH- 539
PL +AI L+W+ S+D +E L N ALME + H
Sbjct: 1675 QGFLCPLHKSAIEERLFWVRSSEDS----------------VETLDDNCYSALMEAFHHG 1718
Query: 540 NDPKEFQRVR 569
D F R R
Sbjct: 1719 RDYFNFLRAR 1728
[86][TOP]
>UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q20LA1_9SECO
Length = 533
Score = 80.9 bits (198), Expect = 7e-14
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +V++V G+PSGFALTV NS+FNEIL+R AYR L P+ E+ F V LIVYGDDN+
Sbjct: 466 GSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVALIVYGDDNV 525
Query: 189 ISVAPS 206
+ + P+
Sbjct: 526 MGIHPN 531
[87][TOP]
>UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus
RepID=Q9IJX4_CRPV
Length = 1771
Score = 80.1 bits (196), Expect = 1e-13
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVY 173
G V+ PSG TV++N ++N +++R + RKLAP+ + + F++ V +I Y
Sbjct: 1559 GDNVYMWTHSQPSGNPFTVIINCLYNSMIMRIVWILLARKLAPEMQSMKKFRENVSMISY 1618
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL- 350
GDDN ++++ WFN I + E K + TD K ++ E+ FLK++F+
Sbjct: 1619 GDDNCLNISDRVVEWFNQITISEQMKEIKHEYTD-EGKTGDMVKFPSLSEIHFLKKRFVF 1677
Query: 351 --KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 524
+L V APL I+ L W +D E L++N+N A
Sbjct: 1678 SHQLQRTV--APLQKDVIYEMLNWT----------------RNTIDPNEILMMNINTAFR 1719
Query: 525 ELYLHNDPKEFQRVRS 572
E+ H E+Q++RS
Sbjct: 1720 EIVYHG-KSEYQKLRS 1734
[88][TOP]
>UniRef100_B4ZF30 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cycas necrotic
stunt virus RepID=B4ZF30_CNSV
Length = 73
Score = 79.7 bits (195), Expect = 1e-13
Identities = 39/73 (53%), Positives = 50/73 (68%)
Frame = +3
Query: 69 VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 248
+NSV NEIL+RY ++ L P++ F V L+VYGDDNL+S A +FNGE I+ TL
Sbjct: 1 INSVLNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 60
Query: 249 AEKKVKITDGSDK 287
+K V ITDGSDK
Sbjct: 61 KKKNVTITDGSDK 73
[89][TOP]
>UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling virus
RepID=Q9YZ97_SDV
Length = 872
Score = 79.0 bits (193), Expect = 2e-13
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
V++++ G PSGFA TV++NS+ NE +++++ L A + F + + +YGD
Sbjct: 527 VYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGLMKEAGYAKEASLYAFHEATEISLYGD 586
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
DN +SVA AS +N + I L VK+ DG+ K T P E+DFLKR+F+
Sbjct: 587 DNFVSVATPVASLYNLKTISEFLRRIGVKLGDGA-KTGITKPFIPLEEVDFLKRQFV--- 642
Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 539
A TAI L P K K ++ G D + L LN+ AL E + H
Sbjct: 643 -----ADAGSTAI------LCPLK-KISIEERLFYVKGGQDELAALELNMATALCEAFFH 690
Query: 540 NDPKEFQR 563
KE+ R
Sbjct: 691 G--KEYFR 696
[90][TOP]
>UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus
RepID=UPI00004FF342
Length = 675
Score = 78.2 bits (191), Expect = 4e-13
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +++V+ G+P GFALTV+VNS+ N L+R+++ + F V L V GDDNL
Sbjct: 327 GIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNL 385
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKFLKLDTG 365
+SV A FN + + LA + DGSDK+ + E P + DFLKR F K
Sbjct: 386 VSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF-KARGD 444
Query: 366 VIQAPLDMTAIFSSLYWL 419
APL ++ SL+W+
Sbjct: 445 RYLAPLSWLSLSESLHWV 462
[91][TOP]
>UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus
RepID=Q5G2U4_9SECO
Length = 2227
Score = 78.2 bits (191), Expect = 4e-13
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNL 188
G +++V+ G+P GFALTV+VNS+ N L+R+++ + F V L V GDDNL
Sbjct: 1879 GIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVVGDDNL 1937
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKFLKLDTG 365
+SV A FN + + LA + DGSDK+ + E P + DFLKR F K
Sbjct: 1938 VSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF-KARGD 1996
Query: 366 VIQAPLDMTAIFSSLYWL 419
APL ++ SL+W+
Sbjct: 1997 RYLAPLSWLSLSESLHWV 2014
[92][TOP]
>UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus
RepID=UPI0000164A59
Length = 682
Score = 75.1 bits (183), Expect = 4e-12
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
+++++ G PSGFA TV++NSV NE +++++ L A + F + + +YGD
Sbjct: 338 LYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGD 397
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFL 350
DN +SVA AS +N I L VK+ DG A T KPF E+DFLKR+F+
Sbjct: 398 DNFVSVATPVASVYNLTTISNFLGRIGVKLGDG----AKTGTIKPFIPLEEVDFLKRQFV 453
Query: 351 KLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 524
D+G I PL +I L+++ G D I L LN+ AL
Sbjct: 454 -ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELNIATALC 496
Query: 525 ELYLH 539
E + H
Sbjct: 497 EAFFH 501
[93][TOP]
>UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV
Length = 2081
Score = 75.1 bits (183), Expect = 4e-12
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGD 179
+++++ G PSGFA TV++NSV NE +++++ L A + F + + +YGD
Sbjct: 1737 LYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGD 1796
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKRKFL 350
DN +SVA AS +N I L VK+ DG A T KPF E+DFLKR+F+
Sbjct: 1797 DNFVSVATPVASVYNLTTISNFLGRIGVKLGDG----AKTGTIKPFIPLEEVDFLKRQFV 1852
Query: 351 KLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 524
D+G I PL +I L+++ G D I L LN+ AL
Sbjct: 1853 -ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELNIATALC 1895
Query: 525 ELYLH 539
E + H
Sbjct: 1896 EAFFH 1900
[94][TOP]
>UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B
RepID=A7KCA2_9VIRU
Length = 1614
Score = 74.7 bits (182), Expect = 5e-12
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + +RY Y L P+ F+ V L+ YGDDN++SV+ C WF
Sbjct: 1288 PSGNPLTVILNSIVNSLRMRYVYFMLNPEHTVTTFKDNVNLMTYGDDNIMSVSREC-DWF 1346
Query: 222 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD-TGVIQAPLDMTAI 398
N +I T A + T +DK++ ++ + FLKR + D G APL+ +I
Sbjct: 1347 NHTSISETFATLNIVYT-MADKESASVPFINIKDASFLKRTWRMDDQLGCYVAPLEEESI 1405
Query: 399 FSSLYWLTPSK 431
SL T SK
Sbjct: 1406 EKSLMVWTRSK 1416
[95][TOP]
>UniRef100_UPI0000163DC1 RNA-dependent RNA polymerase n=1 Tax=Maize chlorotic dwarf virus
RepID=UPI0000163DC1
Length = 612
Score = 73.6 bits (179), Expect = 1e-11
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLI 167
V + +F+ G+PSGFA+TV+ NS N + A+ L +P+ F ++
Sbjct: 346 VKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNYCKVV 405
Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLK 338
VYGDDN++SV + ++N + L++ V TD D P +S PF E+ FLK
Sbjct: 406 VYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSVSFLK 463
Query: 339 RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
R+++ L + + +APLD T+I L+W+ + IE L N+
Sbjct: 464 RRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEALNQNI 507
Query: 510 NVALMELYLH 539
AL E +H
Sbjct: 508 ESALYEASIH 517
[96][TOP]
>UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU
Length = 297
Score = 73.6 bits (179), Expect = 1e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[97][TOP]
>UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU
Length = 297
Score = 73.6 bits (179), Expect = 1e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[98][TOP]
>UniRef100_O11979 Polyprotein n=2 Tax=Maize chlorotic dwarf virus RepID=O11979_9SECO
Length = 3443
Score = 73.6 bits (179), Expect = 1e-11
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLI 167
V + +F+ G+PSGFA+TV+ NS N + A+ L +P+ F ++
Sbjct: 3177 VKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNYCKVV 3236
Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLK 338
VYGDDN++SV + ++N + L++ V TD D P +S PF E+ FLK
Sbjct: 3237 VYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSVSFLK 3294
Query: 339 RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
R+++ L + + +APLD T+I L+W+ + IE L N+
Sbjct: 3295 RRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEALNQNI 3338
Query: 510 NVALMELYLH 539
AL E +H
Sbjct: 3339 ESALYEASIH 3348
[99][TOP]
>UniRef100_Q8B3M2 Polyprotein n=1 Tax=Deformed wing virus RepID=Q8B3M2_9VIRU
Length = 2893
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 2815 ANLDKVSVEGTTNW 2828
[100][TOP]
>UniRef100_Q7TG18 Polyprotein n=1 Tax=Deformed wing virus RepID=Q7TG18_9VIRU
Length = 2893
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 2815 ANLDKVSVEGTTNW 2828
[101][TOP]
>UniRef100_Q6XMI0 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=Q6XMI0_9VIRU
Length = 1566
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 1382 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 1440
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 1441 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 1499
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 1500 ANLDKVSVEGTTNW 1513
[102][TOP]
>UniRef100_Q0EDK8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK8_9VIRU
Length = 297
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[103][TOP]
>UniRef100_Q0EDI6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI6_9VIRU
Length = 297
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[104][TOP]
>UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU
Length = 1759
Score = 72.8 bits (177), Expect = 2e-11
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPS 206
PSG TV++N ++N I++R ++ K P+ + + F + V LI YGDDN++++
Sbjct: 1558 PSGNPFTVIINCLYNSIIMRLSWIRVMEKFQPRLKSMKWFNEYVALITYGDDNVLNIDAK 1617
Query: 207 CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL---KLDTGVIQA 377
WFN I + E + + TD + K ++S+ ++ FLKRKF +L V A
Sbjct: 1618 VVEWFNQINISEVMTEMRHEYTDEA-KTGDIVKSRKLEDIFFLKRKFRFSPELQRHV--A 1674
Query: 378 PLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDPKEF 557
PL + I+ L W S +D E L+ N+ A E+ H +E+
Sbjct: 1675 PLKIEVIYEMLNWSRRS----------------IDPDEILMSNIETAFREVVYHG-KEEY 1717
Query: 558 QRVRS 572
++RS
Sbjct: 1718 DKLRS 1722
[105][TOP]
>UniRef100_A0ZSE7 Polyprotein (Fragment) n=13 Tax=Kakugo virus RepID=A0ZSE7_9VIRU
Length = 297
Score = 72.8 bits (177), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[106][TOP]
>UniRef100_Q0EDK3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK3_9VIRU
Length = 297
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKISVEGTTNW 275
[107][TOP]
>UniRef100_Q0EDI5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI5_9VIRU
Length = 297
Score = 72.4 bits (176), Expect = 2e-11
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGVTDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[108][TOP]
>UniRef100_UPI0000163D77 RNA-dependent RNA polymerase n=1 Tax=Rice tungro spherical virus
RepID=UPI0000163D77
Length = 621
Score = 72.0 bits (175), Expect = 3e-11
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
G + + + G+PSGFA+TV+ NS N + A+ L C+ T C IV
Sbjct: 358 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 417
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
YGDDN++SV +N + + L+ V TDG DK+ P SKP+ ++ FLKR
Sbjct: 418 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 475
Query: 342 KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
F ++++ + +APLD T+I L W+ TP + + +++ + + D ++
Sbjct: 476 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 534
Query: 495 LVLNVNVALMELYL 536
LV +N AL + L
Sbjct: 535 LVRRLNSALTRVML 548
[109][TOP]
>UniRef100_Q98645 ORF1 protein (Fragment) n=1 Tax=Rice tungro spherical virus
RepID=Q98645_9SECO
Length = 1619
Score = 72.0 bits (175), Expect = 3e-11
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
G + + + G+PSGFA+TV+ NS N + A+ L C+ T C IV
Sbjct: 1355 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 1414
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
YGDDN++SV +N + + L+ V TDG DK+ P SKP+ ++ FLKR
Sbjct: 1415 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 1472
Query: 342 KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
F ++++ + +APLD T+I L W+ TP + + +++ + + D ++
Sbjct: 1473 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 1531
Query: 495 LVLNVNVALMELYL 536
LV +N AL + L
Sbjct: 1532 LVQRLNSALKRVML 1545
[110][TOP]
>UniRef100_Q1MNG5 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG5_9SECO
Length = 3471
Score = 72.0 bits (175), Expect = 3e-11
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
G + + + G+PSGFA+TV+ NS N + A+ L C+ T C IV
Sbjct: 3207 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3266
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
YGDDN++SV +N + + L+ V TDG DK+ P SKP+ ++ FLKR
Sbjct: 3267 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3324
Query: 342 KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
F ++++ + +APLD T+I L W+ TP + + +++ + + D ++
Sbjct: 3325 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3383
Query: 495 LVLNVNVALMELYL 536
LV +N AL + L
Sbjct: 3384 LVQRLNSALKRVML 3397
[111][TOP]
>UniRef100_Q1MNG4 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG4_9SECO
Length = 3471
Score = 72.0 bits (175), Expect = 3e-11
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
G + + + G+PSGFA+TV+ NS N + A+ L C+ T C IV
Sbjct: 3207 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3266
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
YGDDN++SV +N + + L+ V TDG DK+ P SKP+ ++ FLKR
Sbjct: 3267 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3324
Query: 342 KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
F ++++ + +APLD T+I L W+ TP + + +++ + + D ++
Sbjct: 3325 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3383
Query: 495 LVLNVNVALMELYL 536
LV +N AL + L
Sbjct: 3384 LVQRLNSALRRVML 3397
[112][TOP]
>UniRef100_Q0EDJ0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ0_9VIRU
Length = 297
Score = 72.0 bits (175), Expect = 3e-11
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T + N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDIXNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[113][TOP]
>UniRef100_Q91PP5 Probable RNA-directed RNA polymerase n=1 Tax=Rice tungro spherical
virus (isolate Vt6) RepID=POLG_RTSVT
Length = 3471
Score = 72.0 bits (175), Expect = 3e-11
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
G + + + G+PSGFA+TV+ NS N + A+ L C+ T C IV
Sbjct: 3207 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3266
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
YGDDN++SV +N + + L+ V TDG DK+ P SKP+ ++ FLKR
Sbjct: 3267 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3324
Query: 342 KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
F ++++ + +APLD T+I L W+ TP + + +++ + + D ++
Sbjct: 3325 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3383
Query: 495 LVLNVNVALMELYL 536
LV +N AL + L
Sbjct: 3384 LVQRLNSALKRVML 3397
[114][TOP]
>UniRef100_Q83034 Probable RNA-directed RNA polymerase n=2 Tax=Rice tungro spherical
virus RepID=POLG_RTSVA
Length = 3473
Score = 72.0 bits (175), Expect = 3e-11
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 18/194 (9%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTVCLIV- 170
G + + + G+PSGFA+TV+ NS N + A+ L C+ T C IV
Sbjct: 3210 GDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTYCKIVA 3269
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF---WELDFLKR 341
YGDDN++SV +N + + L+ V TDG DK+ P SKP+ ++ FLKR
Sbjct: 3270 YGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKMSFLKR 3327
Query: 342 KFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV---DVIEE 494
F ++++ + +APLD T+I L W+ TP + + +++ + + D ++
Sbjct: 3328 GFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGRDYFDD 3386
Query: 495 LVLNVNVALMELYL 536
LV +N AL + L
Sbjct: 3387 LVRRLNSALTRVML 3400
[115][TOP]
>UniRef100_Q0EDK9 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK9_9VIRU
Length = 297
Score = 71.6 bits (174), Expect = 4e-11
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGXTDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[116][TOP]
>UniRef100_Q0EDJ8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ8_9VIRU
Length = 297
Score = 71.6 bits (174), Expect = 4e-11
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K+ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMGFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[117][TOP]
>UniRef100_A0ZSF0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF0_9VIRU
Length = 297
Score = 71.6 bits (174), Expect = 4e-11
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T +
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPLFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[118][TOP]
>UniRef100_Q5MH31 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q5MH31_9SECO
Length = 3481
Score = 71.2 bits (173), Expect = 5e-11
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQTVCLI 167
V + +F+ G+PSGFA+TV+ NS N + A+ L +P+ F + ++
Sbjct: 3215 VKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISSSPLSPQSTLRDFDEYCKVV 3274
Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWEL---DFLK 338
VYGDDN++SV+ ++N + L++ V TD D P +S P+ ++ FLK
Sbjct: 3275 VYGDDNIVSVSEEFIPYYNLRMVAAYLSQFGVTYTD--DAKNPIEKSVPWVDIRTVSFLK 3332
Query: 339 RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
R++ + + + +APL+ T+I L+W+ D IE L N+
Sbjct: 3333 RRWTSIGGQLSTIYKAPLETTSIEERLHWIRECDDD----------------IEALNQNI 3376
Query: 510 NVALMELYLH 539
AL E +H
Sbjct: 3377 ESALYEASIH 3386
[119][TOP]
>UniRef100_B3F388 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F388_9VIRU
Length = 139
Score = 71.2 bits (173), Expect = 5e-11
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + +RYAY L PK E F++ V L+ YGDDN++SV+P+ A W+
Sbjct: 59 PSGHPLTVIINSLVNSLYMRYAYCLLNPKHEVSSFKENVSLMTYGDDNIMSVSPT-APWY 117
Query: 222 NGEAIRVTLAEKKVKIT 272
N AI A + T
Sbjct: 118 NHTAIAAAFATMDITYT 134
[120][TOP]
>UniRef100_A0ZSF1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF1_9VIRU
Length = 297
Score = 71.2 bits (173), Expect = 5e-11
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPXFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[121][TOP]
>UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia
vitripennis virus RepID=C1K2M4_9VIRU
Length = 787
Score = 70.9 bits (172), Expect = 7e-11
Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAP-KPEKCRFQQTVCLIVYGDD 182
+ + N G+PSG A TV+ NS N I IR AY RK AP + F+Q V + GDD
Sbjct: 578 IVRFNTGMPSGNAGTVITNSECNSIYIRCAYLGLARKYAPVLADLYWFKQYVRMFSNGDD 637
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
+++V P SWFN + ++ +K+TD K E E +LKR F K T
Sbjct: 638 LIMAVKPDIISWFNNRTLIDFFSQHNIKMTDAL-KSGKVREFCSLEEATYLKRGFKKHPT 696
Query: 363 --GVIQAPLDMTAIFSSLYWLTPSKDK 437
G APL+ +I + W+ S D+
Sbjct: 697 RPGEWLAPLERASITDTANWIWRSVDR 723
[122][TOP]
>UniRef100_A5A4Z3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cowpea mosaic virus
RepID=A5A4Z3_CPMV
Length = 203
Score = 70.9 bits (172), Expect = 7e-11
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 5/63 (7%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + L+ YGDD
Sbjct: 141 VWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLMGLVTYGDD 200
Query: 183 NLI 191
NL+
Sbjct: 201 NLV 203
[123][TOP]
>UniRef100_Q6QLR4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Venturia canescens
picorna-like virus RepID=Q6QLR4_9PICO
Length = 514
Score = 70.5 bits (171), Expect = 9e-11
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK-----PEKCRFQQTVCLIVYGDD 182
VF+ CGLPSG TV NS N + IR A+ +LA + + F + V L+ GDD
Sbjct: 328 VFRPTCGLPSGNCETVERNSQTNSLYIRIAFYELAKRYAPVYRDAYWFDKKVRLVTNGDD 387
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITD----GSDKDAPTIESKPFWELDFLKRKFL 350
+ SV SWFN + E +K+TD G +D +IE E +LKR F+
Sbjct: 388 LIASVKEDVISWFNNRTLIEFFVEYGLKMTDALKSGVVRDYCSIE-----EASYLKRGFV 442
Query: 351 KLDT--GVIQAPLDMTAIFSSLYWLTPSKDK 437
K T G APL+ +I + W+ S DK
Sbjct: 443 KHPTREGEWMAPLEEASITDTANWVWRSVDK 473
[124][TOP]
>UniRef100_Q7TFA5 Polyprotein n=1 Tax=Varroa destructor virus 1 RepID=Q7TFA5_9VIRU
Length = 2893
Score = 70.1 bits (170), Expect = 1e-10
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A++ + P F + V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWQGITDLP-LSEFSRHVVLVCYGDDLIMNV 2755
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ FN I + K++ TD DK T+ + FLK FLK T V
Sbjct: 2756 SDEMIDKFNAVTIGDFFSRYKMEFTD-QDKSGNTVRWRTLQTATFLKHGFLKHPTRPVFL 2814
Query: 375 APLDMTAIFSSLYW 416
A LD +I + W
Sbjct: 2815 ANLDKVSIEGTTNW 2828
[125][TOP]
>UniRef100_Q76LW4 Polyprotein n=1 Tax=Kakugo virus RepID=Q76LW4_9VIRU
Length = 2893
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ ++ TD DK T++ + FLK FLK T V
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYEMVFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 2815 ANLDKVSVEGTTNW 2828
[126][TOP]
>UniRef100_Q0EDJ6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ6_9VIRU
Length = 297
Score = 70.1 bits (170), Expect = 1e-10
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD D T++ + FLK FLK T V
Sbjct: 203 SDNXIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[127][TOP]
>UniRef100_A5A4Z4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Bean pod mottle
virus RepID=A5A4Z4_9SECO
Length = 197
Score = 70.1 bits (170), Expect = 1e-10
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDD 182
V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V L VYGDD
Sbjct: 135 VWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDD 194
Query: 183 NLI 191
NL+
Sbjct: 195 NLV 197
[128][TOP]
>UniRef100_UPI0000167D17 RNA-dependent RNA polymerase n=1 Tax=Parsnip yellow fleck virus
RepID=UPI0000167D17
Length = 813
Score = 69.7 bits (169), Expect = 2e-10
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 179
+ +V G PSGF +TV+ NS N ++ A+ LA C F + V VYGD
Sbjct: 358 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 417
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
DN++++ W+N + + L + V +TDG+ A E+KP+ E DFLKR F
Sbjct: 418 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 475
Query: 348 L--KLDTGVIQAPLDMTAIFSSLYWL 419
+L + APL +I +YW+
Sbjct: 476 KADELIPSLFHAPLHKRSIEEQVYWI 501
[129][TOP]
>UniRef100_Q7LZW0 Polyprotein n=1 Tax=Parsnip yellow fleck virus RepID=Q7LZW0_9SECO
Length = 637
Score = 69.7 bits (169), Expect = 2e-10
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 179
+ +V G PSGF +TV+ NS N ++ A+ LA C F + V VYGD
Sbjct: 491 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 550
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
DN++++ W+N + + L + V +TDG+ A E+KP+ E DFLKR F
Sbjct: 551 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 608
Query: 348 L--KLDTGVIQAPLDMTAIFSSLYWL 419
+L + APL +I +YW+
Sbjct: 609 KADELIPSLFHAPLHKRSIEEQVYWI 634
[130][TOP]
>UniRef100_Q1LZW4 Non-structural polyprotein n=1 Tax=Taura syndrome virus
RepID=Q1LZW4_9VIRU
Length = 2107
Score = 69.7 bits (169), Expect = 2e-10
Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
+L SV+ + WFN AI +A + TD + +P + E+ FLKR+F+ D
Sbjct: 1950 SLCSVSDKVSEWFNQHAITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008
Query: 363 GVIQAPLDMTAIFSSLYW 416
I APL I W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025
[131][TOP]
>UniRef100_Q0EDK4 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK4_9VIRU
Length = 297
Score = 69.7 bits (169), Expect = 2e-10
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A L ++ + W
Sbjct: 262 ANLXKVSVEGTTNW 275
[132][TOP]
>UniRef100_Q05057 Probable RNA-directed RNA polymerase n=1 Tax=Parsnip yellow fleck
virus (isolate P-121) RepID=POLG_PYFV1
Length = 3027
Score = 69.7 bits (169), Expect = 2e-10
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 179
+ +V G PSGF +TV+ NS N ++ A+ LA C F + V VYGD
Sbjct: 2572 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 2631
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
DN++++ W+N + + L + V +TDG+ A E+KP+ E DFLKR F
Sbjct: 2632 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 2689
Query: 348 L--KLDTGVIQAPLDMTAIFSSLYWL 419
+L + APL +I +YW+
Sbjct: 2690 KADELIPSLFHAPLHKRSIEEQVYWI 2715
[133][TOP]
>UniRef100_Q0EDJ5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ5_9VIRU
Length = 297
Score = 69.3 bits (168), Expect = 2e-10
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD D T++ + FLK FLK T V
Sbjct: 203 SDNXIDKFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[134][TOP]
>UniRef100_A6NA62 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato torrado
virus RepID=A6NA62_9SECO
Length = 216
Score = 69.3 bits (168), Expect = 2e-10
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + V
Sbjct: 96 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 155
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
YGDDNL++V P W+ AI L V I +G DK+ SK EL FL R
Sbjct: 156 YGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRG 214
Query: 345 F 347
F
Sbjct: 215 F 215
[135][TOP]
>UniRef100_A1X599 Polyprotein (Fragment) n=1 Tax=Deformed wing virus
RepID=A1X599_9VIRU
Length = 205
Score = 69.3 bits (168), Expect = 2e-10
Identities = 40/115 (34%), Positives = 64/115 (55%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V
Sbjct: 90 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 148
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
+ + FN I ++ K++ TD DK T++ + FLK FLK T
Sbjct: 149 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 202
[136][TOP]
>UniRef100_Q09X76 Nonstructural polyprotein n=1 Tax=Taura syndrome virus
RepID=Q09X76_9VIRU
Length = 2107
Score = 68.9 bits (167), Expect = 3e-10
Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVARIFYGDD 1949
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
+L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDQ 2008
Query: 363 GVIQAPLDMTAIFSSLYW 416
I APL I W
Sbjct: 2009 FWI-APLSQNTIEDMCMW 2025
[137][TOP]
>UniRef100_Q91NQ2 Non-structural polyprotein n=1 Tax=Taura syndrome virus
RepID=Q91NQ2_9VIRU
Length = 2107
Score = 68.6 bits (166), Expect = 3e-10
Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
+L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDH 2008
Query: 363 GVIQAPLDMTAIFSSLYW 416
I APL I W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025
[138][TOP]
>UniRef100_Q6WGS3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
picorna-like virus RepID=Q6WGS3_9PICO
Length = 151
Score = 68.2 bits (165), Expect = 4e-10
Identities = 40/100 (40%), Positives = 59/100 (59%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
+ + N PSG LTV++NS+ N + +RYAY L+P+ + F+ V L YGDDN+ V
Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLSPQKDLLTFKHHVALFTYGDDNICGV 109
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
+ CA +F I+ LAE ++ T +DK+A ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144
[139][TOP]
>UniRef100_Q5DM98 Non-structural polyprotein n=1 Tax=Taura syndrome virus
RepID=Q5DM98_9VIRU
Length = 2107
Score = 68.2 bits (165), Expect = 4e-10
Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
+L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008
Query: 363 GVIQAPLDMTAIFSSLYW 416
I APL I W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025
[140][TOP]
>UniRef100_Q4JFT3 Non-structural polyprotein n=1 Tax=Taura syndrome virus
RepID=Q4JFT3_9VIRU
Length = 2107
Score = 68.2 bits (165), Expect = 4e-10
Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 182
KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949
Query: 183 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT 362
+L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008
Query: 363 GVIQAPLDMTAIFSSLYW 416
I APL I W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025
[141][TOP]
>UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU
Length = 3085
Score = 68.2 bits (165), Expect = 4e-10
Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
VFKVN G+ +G +T VVNSV N IL+ Y + K+A + F + +IV GDD +IS+
Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIA-RRRASEFFKLTYIIVMGDDVVISL 2815
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 362
F+ I A+ +K+TD S+K+ T E KP F + +FL R F D
Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDK 437
+ AP+ A+F W++ +D+
Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898
[142][TOP]
>UniRef100_Q6WGR8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
picorna-like virus RepID=Q6WGR8_9PICO
Length = 151
Score = 67.8 bits (164), Expect = 6e-10
Identities = 40/100 (40%), Positives = 58/100 (58%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
+ + N PSG LTV++NS+ N + +RYAY L P+ + F+ V L YGDDN+ V
Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYALNPQKDLLTFKHRVALFTYGDDNICGV 109
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
+ CA +F I+ LAE ++ T +DK+A ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144
[143][TOP]
>UniRef100_Q0EDJ2 Polyprotein (Fragment) n=2 Tax=Kakugo virus RepID=Q0EDJ2_9VIRU
Length = 297
Score = 67.8 bits (164), Expect = 6e-10
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V +V CG+PSG T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V
Sbjct: 144 VXRVPCGIPSGSPXTDILNTISNCLLIRLAWLGITDXP-LSEFSQNVVLVCYGDDLXMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD D T++ + FLK FLK T V
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A LD ++ + W
Sbjct: 262 ANLDKVSVEGTTNW 275
[144][TOP]
>UniRef100_B3F389 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F389_9VIRU
Length = 139
Score = 67.8 bits (164), Expect = 6e-10
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + IRY YR L PK E F+Q V L+ YGDDN++ ++ SWF
Sbjct: 59 PSGHPLTVIINSLVNSLYIRYCYRMLNPKKEVITFKQNVNLMTYGDDNIMGISDK-ISWF 117
Query: 222 NGEAIRVTLAEKKVKIT 272
N +I L + T
Sbjct: 118 NHTSIADCLGMANIVYT 134
[145][TOP]
>UniRef100_A7KCA0 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-A
RepID=A7KCA0_9VIRU
Length = 1689
Score = 67.4 bits (163), Expect = 7e-10
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
Frame = +3
Query: 27 VNCGL-PSGFALTVVVNSVFNEILIRYAYRKLAPKPE--KCRFQQTVCLIVYGDDNLISV 197
++CG PSG LTV +N + N +L+R AY + P E F+ ++ YGDD SV
Sbjct: 1486 IHCGSNPSGQNLTVYINCIVNSLLLRCAYYHMYPAAEGNPEPFRHNCAVMTYGDDVKGSV 1545
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL-KLDTGVIQ 374
C W+N LAE+ + T + PT + DFLKR L +TG+I
Sbjct: 1546 RQEC-DWYNHITYAQFLAERDMVFTMPDKESTPTPYMNDL-DADFLKRHNLYNPETGLIH 1603
Query: 375 APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSG 473
LD +IF SL+ + SK Q A G
Sbjct: 1604 GVLDQNSIFKSLHSVLKSKAISAEDQSAQNIDG 1636
[146][TOP]
>UniRef100_Q6WGS5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=unidentified
picorna-like virus RepID=Q6WGS5_9PICO
Length = 151
Score = 67.0 bits (162), Expect = 1e-09
Identities = 40/100 (40%), Positives = 58/100 (58%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
+ + N PSG LTV++NS+ N + +RYAY L P+ + F+ V L YGDDN+ V
Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNPQKDLLTFKHHVALFTYGDDNICGV 109
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
+ CA +F I+ LAE ++ T +DK+A ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144
[147][TOP]
>UniRef100_Q6EEL1 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q6EEL1_9SECO
Length = 3457
Score = 67.0 bits (162), Expect = 1e-09
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQTVCLI 167
V + +F+ G+PSGFA+TV+ NS N + A+ L+P+ F + +I
Sbjct: 3191 VKEYLFQYCQGMPSGFAMTVIFNSFMNYYYLSLAWMNLISASPLSPQASLRYFDEYCKVI 3250
Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD---FLK 338
VYGDDN+++V ++N + L++ V TD D P +S+ + +++ FLK
Sbjct: 3251 VYGDDNIVAVNEEFLEYYNLRLVAGYLSQFGVSYTD--DAKNPIEKSERYVKIEDVTFLK 3308
Query: 339 RKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 509
R+++ L + + +APLD +I L W+ D GE+ LV N+
Sbjct: 3309 RRWVSLGGRASMLYKAPLDKVSIEERLNWIRECDD------------GEL----ALVQNI 3352
Query: 510 NVALMELYLH 539
AL E +H
Sbjct: 3353 ESALYEASIH 3362
[148][TOP]
>UniRef100_Q0EDK2 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK2_9VIRU
Length = 297
Score = 67.0 bits (162), Expect = 1e-09
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A L ++ + W
Sbjct: 262 ANLXKISVEGTTNW 275
[149][TOP]
>UniRef100_Q0EDK1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK1_9VIRU
Length = 297
Score = 67.0 bits (162), Expect = 1e-09
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
V++V CG+PSG +T ++N++ N +LIR A+ + P Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDT-GVIQ 374
+ + FN I ++ K++ TD DK T++ + FLK FLK T V
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261
Query: 375 APLDMTAIFSSLYW 416
A L ++ + W
Sbjct: 262 ANLXKXSVEGTTNW 275
[150][TOP]
>UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU
Length = 3085
Score = 66.6 bits (161), Expect = 1e-09
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
VFKVN G+ +G +T VVNSV N IL+ Y + K+ + F + +IV GDD +IS+
Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 2815
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 362
F+ I A+ +K+TD S+K+ T E KP F + +FL R F D
Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDK 437
+ AP+ A+F W++ +D+
Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898
[151][TOP]
>UniRef100_B3F394 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F394_9VIRU
Length = 138
Score = 66.6 bits (161), Expect = 1e-09
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++N + N + +RY Y KL+P+ F++ V ++ YGDDN++ V+ S A WF
Sbjct: 58 PSGHPLTVIINGLANSLYLRYCYAKLSPEANCVNFKRDVAVMTYGDDNIMGVSDS-APWF 116
Query: 222 NGEAIRVTLAE 254
N ++ TLA+
Sbjct: 117 NHTTLQSTLAD 127
[152][TOP]
>UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious
flacherie virus RepID=A3RKR2_9VIRU
Length = 639
Score = 66.6 bits (161), Expect = 1e-09
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
VFKVN G+ +G +T VVNSV N IL+ Y + K+ + F + +IV GDD +IS+
Sbjct: 311 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 369
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKP---FWELDFLKRKFLKLDT-- 362
F+ I A+ +K+TD S+K+ T E KP F + +FL R F D
Sbjct: 370 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 427
Query: 363 GVIQAPLDMTAIFSSLYWLTPSKDK 437
+ AP+ A+F W++ +D+
Sbjct: 428 DITFAPVKTIALFDCPLWISKGQDE 452
[153][TOP]
>UniRef100_UPI0001765C94 RNA-dependent RNA polymerase n=1 Tax=Tomato marchitez virus
RepID=UPI0001765C94
Length = 249
Score = 66.2 bits (160), Expect = 2e-09
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLI 167
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P + F Q + +
Sbjct: 132 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIA 190
Query: 168 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIESKPFWELDFLKR 341
VYGDDNL++V P W++ I L V I +G DK D ++ + EL FL R
Sbjct: 191 VYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSR 249
[154][TOP]
>UniRef100_B1PM64 Polyprotein (Fragment) n=1 Tax=Tomato torrado virus
RepID=B1PM64_9SECO
Length = 910
Score = 66.2 bits (160), Expect = 2e-09
Identities = 59/190 (31%), Positives = 81/190 (42%), Gaps = 19/190 (10%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIV 170
KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K + + V
Sbjct: 187 KVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAV 246
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESK--PFWELDFLKRK 344
YGDDNL++V P W+ AI L V I +G DK+ SK E FL
Sbjct: 247 YGDDNLVAV-PMELHWYTLPAIAQELEVVNVIIKNGIDKNMDVSSSKMLDLSEPTFLXXX 305
Query: 345 FLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEEL 497
YW+ PS + T + + + G V E+L
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKL 364
Query: 498 VLNVNVALME 527
V +V AL E
Sbjct: 365 VADVQNALKE 374
[155][TOP]
>UniRef100_B3F397 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F397_9VIRU
Length = 152
Score = 65.9 bits (159), Expect = 2e-09
Identities = 38/96 (39%), Positives = 57/96 (59%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + +RYAY L P+ E F++ V L+ YGDDN+++V+ + W+
Sbjct: 59 PSGHPLTVIINSLVNSLYMRYAYIILNPEQESASFRKNVALLTYGDDNILTVSRN-IDWY 117
Query: 222 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 329
N I A+ + T DK+A ES PF L+
Sbjct: 118 NHTTITQAFADIGLVYT-MPDKEA---ESVPFLSLN 149
[156][TOP]
>UniRef100_B3F387 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F387_9VIRU
Length = 139
Score = 65.5 bits (158), Expect = 3e-09
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + +RY Y L PK F++ V L+ YGDDN++ V+P A WF
Sbjct: 59 PSGHPLTVIINSIVNSLYMRYCYVMLNPKFTVATFKKHVRLMTYGDDNIMGVSPD-ARWF 117
Query: 222 NGEAIRVTLAEKKVKIT 272
N AI L++ + T
Sbjct: 118 NHTAIAKVLSDIDITYT 134
[157][TOP]
>UniRef100_B3F390 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F390_9VIRU
Length = 139
Score = 64.7 bits (156), Expect = 5e-09
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + +RY YR L P E F++ V L+ YGDDN+++V+ SWF
Sbjct: 59 PSGHPLTVIINSLANALYMRYCYRILNPAHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117
Query: 222 NGEAIRVTLAEKKVKIT 272
N +I TL E + T
Sbjct: 118 NHTSIANTLKEIGITYT 134
[158][TOP]
>UniRef100_Q6WGT7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
picorna-like virus RepID=Q6WGT7_9PICO
Length = 148
Score = 64.3 bits (155), Expect = 6e-09
Identities = 40/96 (41%), Positives = 55/96 (57%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ S WF
Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114
Query: 222 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 329
N AI LA V+ T +DK++ +S PF +D
Sbjct: 115 NHTAIVAELANIGVEYT-MADKES---KSVPFIHID 146
[159][TOP]
>UniRef100_Q6WGS2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
picorna-like virus RepID=Q6WGS2_9PICO
Length = 148
Score = 64.3 bits (155), Expect = 6e-09
Identities = 40/96 (41%), Positives = 55/96 (57%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ S WF
Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114
Query: 222 NGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELD 329
N AI LA V+ T +DK++ +S PF +D
Sbjct: 115 NHTAIVAELANIGVEYT-MADKES---KSVPFIHID 146
[160][TOP]
>UniRef100_Q6A1M5 Polyprotein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q6A1M5_TRSV
Length = 254
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
+VF+V G+PSG ALTV++NSVFNEILIRY Y+ + P PE RF+ V L+V
Sbjct: 203 QVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVV 254
[161][TOP]
>UniRef100_B6UIR8 Polyprotein n=1 Tax=Carrot necrotic dieback virus RepID=B6UIR8_9SECO
Length = 3015
Score = 64.3 bits (155), Expect = 6e-09
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQTVCLIVYGD 179
V +++ G PSGF +TV+ NS N ++ A+ LA + + F V VYGD
Sbjct: 2563 VLRISGGGPSGFPMTVIFNSFINLFYLQSAWIMLASQNGRSDISCPSNFPSFVRACVYGD 2622
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPFWEL---DFLKRKF 347
DN++++ W+N + + L + V +TDG+ A ++P+ ++ DFLKR F
Sbjct: 2623 DNIVAIKNEVLPWYNLQTVSKILKDYFGVTMTDGAKNCAE--NAQPYGKILDFDFLKRNF 2680
Query: 348 L--KLDTGVIQAPLDMTAIFSSLYWLTPSKD 434
+L + APL +I +YW+ D
Sbjct: 2681 RPDELIPSLFHAPLHKRSIEEQVYWIREGGD 2711
[162][TOP]
>UniRef100_B3F391 RNA-dependent RNA polymerase (Fragment) n=2 Tax=uncultured marine
RNA virus RepID=B3F391_9VIRU
Length = 139
Score = 64.3 bits (155), Expect = 6e-09
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + +RY YR L P E F++ V L+ YGDDN+++V+ SWF
Sbjct: 59 PSGHPLTVIINSLANALYMRYCYRILNPVHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117
Query: 222 NGEAIRVTLAEKKVKIT 272
N +I TL E + T
Sbjct: 118 NHTSIANTLKEIGITYT 134
[163][TOP]
>UniRef100_Q6WGS9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
picorna-like virus RepID=Q6WGS9_9PICO
Length = 148
Score = 63.5 bits (153), Expect = 1e-08
Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ WF
Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMGFK---QDWF 114
Query: 222 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 302
N AI LA V+ T D K P+I
Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143
[164][TOP]
>UniRef100_A5A104 Polyprotein n=1 Tax=Brevicoryne brassicae picorna-like virus
RepID=A5A104_9VIRU
Length = 2983
Score = 63.5 bits (153), Expect = 1e-08
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY---RKLAPKPEKCRFQQTVCLIVYGDDNL 188
+++V CGLPSG TV+ NS+ N I IR A+ + + F+ + LI YGDD +
Sbjct: 2776 LYEVQCGLPSGNPATVIFNSIVNSIYIRCAWLDVMRNSSYKSLLDFRNNIKLITYGDDLI 2835
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWE-LDFLKRKFL--KLD 359
S+ S + FN ++ + +K TD + K +E + E FLK F +
Sbjct: 2836 ASIDNSVSDKFNNNSLSHFFLKHNIKFTDAA-KTGVNVEPYIYLETATFLKHAFKPHPIR 2894
Query: 360 TGVIQAPLDMTAIFSSLYWLTPSKD-KFHTHQKASQ-----YSGEVDVIEELVLNVNVAL 521
GV A L+ +I W+ S D K T+ Q Y D V ++ A
Sbjct: 2895 QGVYLAQLEELSITECANWIRKSPDPKTATYDNCVQGTMLAYGHGPDYYNRYVKKISEAW 2954
Query: 522 MELY 533
E Y
Sbjct: 2955 FEKY 2958
[165][TOP]
>UniRef100_Q6WGR9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
picorna-like virus RepID=Q6WGR9_9PICO
Length = 151
Score = 63.2 bits (152), Expect = 1e-08
Identities = 39/100 (39%), Positives = 57/100 (57%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 197
+ + N PSG LTV++NS+ N + +RYAY L + + F+ V L YGDDN+ V
Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNLQKDLLTFKHHVALFTYGDDNICGV 109
Query: 198 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
+ CA +F I+ LAE ++ T +DK+A ES PF
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEA---ESVPF 144
[166][TOP]
>UniRef100_Q6A2S5 Polyprotein (Fragment) n=1 Tax=Potato black ringspot virus
RepID=Q6A2S5_9SECO
Length = 252
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
+VF+V G+PSG ALTV++NSVFNEILIRY Y+ + P PE RF+ V L V
Sbjct: 201 QVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVVPSPEFNRFETFVTLAV 252
[167][TOP]
>UniRef100_B3F386 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F386_9VIRU
Length = 139
Score = 61.6 bits (148), Expect = 4e-08
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N I +RY Y L P E F+ V L+ YGDDN+++V+ C W+
Sbjct: 59 PSGNPLTVILNSIVNCIRMRYVYLVLNPDKEVETFKNNVSLMTYGDDNIMTVSEEC-DWY 117
Query: 222 NGEAIRVTLAEKKVKIT 272
N AI E V T
Sbjct: 118 NHTAISQAFKESGVVYT 134
[168][TOP]
>UniRef100_Q6WGS1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
picorna-like virus RepID=Q6WGS1_9PICO
Length = 148
Score = 61.2 bits (147), Expect = 5e-08
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV+VNS+ N + +RY Y L P E F++ L+ YGDDN++ WF
Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENESLLTYGDDNVMGFK---QDWF 114
Query: 222 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 302
N AI LA V+ T D K P+I
Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143
[169][TOP]
>UniRef100_Q6A1M4 Polyprotein (Fragment) n=1 Tax=Squash mosaic virus
RepID=Q6A1M4_9SECO
Length = 243
Score = 60.8 bits (146), Expect = 7e-08
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTVCLI 167
+V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V L+
Sbjct: 187 EVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLV 242
[170][TOP]
>UniRef100_B3F385 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F385_9VIRU
Length = 139
Score = 60.5 bits (145), Expect = 9e-08
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++N + N + RY Y L P E F+ V L+ YGDDN++ V+P A WF
Sbjct: 59 PSGHPLTVIINGLANSLYNRYCYFILNPNSEVHSFKNNVNLMTYGDDNIMGVSPE-APWF 117
Query: 222 NGEAIRVTLAEKKVKIT 272
N AI L++ V T
Sbjct: 118 NHTAIADALSKIGVTYT 134
[171][TOP]
>UniRef100_A4UVR7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Citrus mosaic
sadwavirus RepID=A4UVR7_SDV
Length = 319
Score = 60.1 bits (144), Expect = 1e-07
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +3
Query: 138 CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPF 317
C F + + +YGDDN +SVA + AS +N E I L+ VK+ DG+ K P
Sbjct: 21 CAFHEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA-KSGTIKPFIPL 79
Query: 318 WELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIE 491
E+DFLKR+F+ D+G I PL +I L+++ G D +
Sbjct: 80 EEVDFLKRQFI-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELA 122
Query: 492 ELVLNVNVALMELYLH 539
L LNV AL E + H
Sbjct: 123 ALELNVATALCEAFFH 138
[172][TOP]
>UniRef100_Q2HWK3 Polyprotein n=1 Tax=Rhizosolenia setigera RNA virus
RepID=Q2HWK3_9VIRU
Length = 1605
Score = 59.7 bits (143), Expect = 2e-07
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS----- 206
PSG LTV NS+ N + R A+RK+ P R++ V L+ YGDD +SV+P
Sbjct: 1396 PSGQNLTVYTNSIVNSLYHRCAFRKIYPN-FSGRYRDAVALMTYGDDVKMSVSPKFPDYN 1454
Query: 207 ---CASWFNGEAIRVTLAEKK-VKITDGSDKDAPTIESKPFWELDF-LKRKFLKLDTGVI 371
S FN + I T+AEK+ + +DA ++ K WE + ++ G+
Sbjct: 1455 HTRIQSEFNKQGIEYTMAEKEAASVPFIQHEDADFLKRKSRWEPSYSYTEGDGTINKGMW 1514
Query: 372 QAPLDMTAIFSSLYWLTPSKDK 437
A LD +IF SL+ SK K
Sbjct: 1515 LAMLDEESIFKSLHANLASKVK 1536
[173][TOP]
>UniRef100_Q1L028 Nonstructural protein n=1 Tax=Homalodisca coagulata virus-1
RepID=Q1L028_9VIRU
Length = 1795
Score = 58.9 bits (141), Expect = 3e-07
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Frame = +3
Query: 39 LPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQ---TVCLIVYGDDNLISVAPSC 209
LPSG LT +VNS++ ++ RY K + + Q + L+ YGDD+++S+
Sbjct: 1589 LPSGHFLTAIVNSLYVNLIFRYLLAKSSKLTSHIQIDQLCRRMKLVSYGDDHIVSIPSGY 1648
Query: 210 ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDTGVIQAPLD 386
FN + +E + TD + D E++ ++ FLKR F + + APL
Sbjct: 1649 EKIFNQSTLPTLFSEIGMTYTDETKSDREVPETRRIEDVTFLKRGFRWEKELNRYVAPLS 1708
Query: 387 MTAIFSSLYWLTPS 428
+ + + +W + S
Sbjct: 1709 LDTVLETPFWRSKS 1722
[174][TOP]
>UniRef100_B3F393 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F393_9VIRU
Length = 139
Score = 58.9 bits (141), Expect = 3e-07
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++NS+ N + IRY+Y P E F+ V LI YGDDN + ++ + WF
Sbjct: 59 PSGHPLTVIINSLVNSLYIRYSYYLTNPNQEIDTFKDNVALITYGDDNAMGISNN-VPWF 117
Query: 222 NGEAIRVTLA 251
N +I+ L+
Sbjct: 118 NHTSIQQALS 127
[175][TOP]
>UniRef100_A7LM73 Polyprotein n=1 Tax=Honey bee slow paralysis virus RepID=A7LM73_9VIRU
Length = 2964
Score = 58.2 bits (139), Expect = 5e-07
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Frame = +3
Query: 36 GLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDNLISVAP 203
G+ SG +T +NS + I+ A+ R+L K F + ++VYGDD ++SV+
Sbjct: 2771 GIASGSPITAELNSEVGKKYIKLAFLGICRQLNYKYSLNDFNKHCRVVVYGDDLILSVSD 2830
Query: 204 SCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL--KLDTGVIQA 377
+ SWFN ++I L +++TD + KD ++ +P + FLKR F +G+ A
Sbjct: 2831 AFVSWFNLQSISEYLDNYGIRLTDVT-KDGTIVKYRPLADSSFLKRSFKPHPSRSGIYLA 2889
Query: 378 PLDMTAIFSSLYWLTPSKDK 437
P++ + W D+
Sbjct: 2890 PIEPRSYQECTNWCHKQNDE 2909
[176][TOP]
>UniRef100_Q672I1 Capsid protein n=1 Tax=Sapovirus Hu/Dresden/pJG-Sap01/DE
RepID=POLG_SVSAP
Length = 2280
Score = 58.2 bits (139), Expect = 5e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 1551
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D SD PT + P FLKR F +
Sbjct: 1552 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 1605
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630
[177][TOP]
>UniRef100_Q9IPD8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sapovirus
Ebt3/1996/JPN RepID=Q9IPD8_9CALI
Length = 261
Score = 57.8 bits (138), Expect = 6e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 65 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 124
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D SD PT + P FLKR F +
Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 178
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203
[178][TOP]
>UniRef100_Q9DSN9 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
RepID=Q9DSN9_9VIRU
Length = 1906
Score = 57.8 bits (138), Expect = 6e-07
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 17/196 (8%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCR----FQQTVC 161
G V+ + PSG T +N N + +R + + K KC F + V
Sbjct: 1693 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKCYVMKDFSKHVS 1752
Query: 162 LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWE 323
++ YGDDN+I+ + + WFN E I + TD G + + P TIE +
Sbjct: 1753 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGKNGEVPKWRTIE-----D 1807
Query: 324 LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 497
+ +LKRKF + D+ V +APL M I W G +D+ E
Sbjct: 1808 VQYLKRKF-RYDSKRKVWEAPLCMDTILEMPNWC----------------RGSLDIQEGT 1850
Query: 498 VLNVNVALMELYLHND 545
+N A+MEL +H +
Sbjct: 1851 KVNCENAIMELSMHEE 1866
[179][TOP]
>UniRef100_Q6XDK5 Polyprotein n=1 Tax=Sapovirus Mc114 RepID=Q6XDK5_9CALI
Length = 2280
Score = 57.8 bits (138), Expect = 6e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1551
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D SD PT + P FLKR F +
Sbjct: 1552 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 1605
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630
[180][TOP]
>UniRef100_Q5Y975 Nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 1
RepID=Q5Y975_9VIRU
Length = 1396
Score = 57.8 bits (138), Expect = 6e-07
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 17/183 (9%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAY---------------RKLAPKPEKCRFQQTVCLIVYG 176
PSG T +N + N I +R + +K K F+ V LI YG
Sbjct: 1188 PSGNPATTPLNCLINSIGLRLCFLRCFEEHKAFFMELMKKFGCKTRMELFRLLVSLISYG 1247
Query: 177 DDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-ESKPFWELDFLKRKFL- 350
DDN+I++ P + FN I AE TD + + + + K E+ FLKR F+
Sbjct: 1248 DDNVINIHPLISHLFNMNTITKYFAEFGFTYTDETKQVGKGVPDYKTLEEVSFLKRGFIF 1307
Query: 351 KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 530
+ APLD+ I + W+ ++D +E +N A+MEL
Sbjct: 1308 NEERNCYDAPLDINTILEMINWVRK----------------DLDQVESTKINCENAIMEL 1351
Query: 531 YLH 539
+H
Sbjct: 1352 AMH 1354
[181][TOP]
>UniRef100_Q69014 Capsid protein (Fragment) n=1 Tax=Sapporo virus-Manchester
RepID=POLG_SVM93
Length = 2208
Score = 57.8 bits (138), Expect = 6e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 1420 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1479
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D SD PT + P FLKR F +
Sbjct: 1480 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 1533
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
G I+A LD+T+I YWL ++
Sbjct: 1534 TPHG-IRALLDITSITRQFYWLKANR 1558
[182][TOP]
>UniRef100_Q91EJ7 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Lyon/30388/98/F
RepID=Q91EJ7_9CALI
Length = 827
Score = 57.4 bits (137), Expect = 8e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 39 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 98
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D SD PT + P FLKR F +
Sbjct: 99 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 152
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 153 TPHGV-RALLDITSITRQFYWLKANR 177
[183][TOP]
>UniRef100_Q8BDE0 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
RepID=Q8BDE0_9VIRU
Length = 1904
Score = 57.4 bits (137), Expect = 8e-07
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 161
G V+ + PSG T +N N + +R + + K F + V
Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750
Query: 162 LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWE 323
++ YGDDN+I+ + + WFN E I + TD G++ + P TIE +
Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805
Query: 324 LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 497
+ +LKRKF + D+ V +APL M I W G +D+ E
Sbjct: 1806 VQYLKRKF-RYDSKRKVWEAPLSMDTILEMPNWC----------------RGGLDIQEGT 1848
Query: 498 VLNVNVALMELYLHND 545
+N A+MEL +H +
Sbjct: 1849 KVNCENAIMELSMHEE 1864
[184][TOP]
>UniRef100_Q0PWW7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Dandelion yellow
mosaic virus RepID=Q0PWW7_9VIRU
Length = 262
Score = 57.4 bits (137), Expect = 8e-07
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGD 179
V + G PSGF +TV+ NS N + A+ LA + F++ V VYGD
Sbjct: 126 VLSIGGGGPSGFPMTVIFNSYINLFYLMSAWSHLATDNGRVDIQHPSFFKKYVRACVYGD 185
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIESKPF---WELDFLKRKF 347
DN++S+ SW+N ++ L + V +TDG +A +KP+ E DFLKR F
Sbjct: 186 DNIVSIKEEVISWYNLCSVSDFLKKAFGVTMTDGEKNEAHL--AKPYGKILEFDFLKRGF 243
Query: 348 L--KLDTGVIQAPLDMTAI 398
+ APL+ +I
Sbjct: 244 FPDSQIPSLFHAPLNKVSI 262
[185][TOP]
>UniRef100_O93123 Polyprotein (Fragment) n=1 Tax=Sapporo virus-Houston/86
RepID=O93123_9CALI
Length = 853
Score = 57.4 bits (137), Expect = 8e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 65 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 124
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D SD PT + P FLKR F +
Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 178
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203
[186][TOP]
>UniRef100_O12155 Polymerase and capsid polyprotein (Fragment) n=1 Tax=Sapporo
virus-Sapporo RepID=O12155_9CALI
Length = 861
Score = 57.4 bits (137), Expect = 8e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 72 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 131
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D SD PT + P FLKR F +
Sbjct: 132 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPT--NTPV----FLKRTFTQ 185
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 186 TPHGV-RALLDITSITRQFYWLKANR 210
[187][TOP]
>UniRef100_C4PBJ5 Truncated polyprotein (Fragment) n=1 Tax=Sapovirus Hu/697/2005/BGD
RepID=C4PBJ5_9CALI
Length = 344
Score = 57.4 bits (137), Expect = 8e-07
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I I A + P Q + Y
Sbjct: 20 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 79
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D S+ PT + P FLKR F +
Sbjct: 80 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPT--NTPV----FLKRTFTQ 133
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 134 TPHGV-RALLDITSITRQFYWLKANR 158
[188][TOP]
>UniRef100_Q8BDE1 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
RepID=Q8BDE1_9VIRU
Length = 1904
Score = 57.0 bits (136), Expect = 1e-06
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 16/195 (8%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 161
G V+ + PSG T +N N + +R + + K F + V
Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750
Query: 162 LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIESKPFWE 323
++ YGDDN+I+ + + WFN E I + TD G++ + P TIE +
Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805
Query: 324 LDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELV 500
+ +LKRKF V +APL M I W G +DV E
Sbjct: 1806 VQYLKRKFRYDFKRKVWEAPLCMDTILEMPNWC----------------RGGLDVQEGTK 1849
Query: 501 LNVNVALMELYLHND 545
+N A+MEL +H +
Sbjct: 1850 VNCENAIMELSMHEE 1864
[189][TOP]
>UniRef100_Q6A1Z2 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus
RepID=Q6A1Z2_ARMV
Length = 236
Score = 57.0 bits (136), Expect = 1e-06
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 167
G +V++ G+PSG ALTVV+NS+FNE+L+RY ++K+ P + F + V L+
Sbjct: 183 GNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLV 235
[190][TOP]
>UniRef100_Q2WFL9 Polyprotein (Fragment) n=2 Tax=Sapovirus GI RepID=Q2WFL9_9CALI
Length = 358
Score = 57.0 bits (136), Expect = 1e-06
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T V+NS+ + I I A + P Q + Y
Sbjct: 36 YVNDIKFVTRGGLPSGMPFTSVINSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 95
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D S+ PT + P FLKR F +
Sbjct: 96 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPT--NTPV----FLKRTFTQ 149
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 150 TPHGV-RALLDITSITRQFYWLKANR 174
[191][TOP]
>UniRef100_B3F398 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F398_9VIRU
Length = 137
Score = 57.0 bits (136), Expect = 1e-06
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG +LT N + N IL RYA+ + +P+ + RF++ V L+VYGDDN V+ S WF
Sbjct: 58 PSGISLTTWTNCIINSILQRYAFFR-SPRSARFRFRECVSLMVYGDDNAAGVS-SEVKWF 115
Query: 222 NGEAIRVTLAEKKVKIT 272
N I +L + ++ T
Sbjct: 116 NHTTIATSLQQCGIEYT 132
[192][TOP]
>UniRef100_Q6A2S6 Polyprotein (Fragment) n=1 Tax=Cherry leaf roll virus
RepID=Q6A2S6_9SECO
Length = 240
Score = 56.6 bits (135), Expect = 1e-06
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
G +V++V GLPSG A+TV+++S+FNEILIRYAYR + RF V L+V
Sbjct: 187 GSQVYEVRAGLPSGCAITVIMDSIFNEILIRYAYRVSVGPILRNRFNHFVKLVV 240
[193][TOP]
>UniRef100_O36184 Nonstructural polyprotein n=1 Tax=Plautia stali intestine virus
RepID=O36184_9VIRU
Length = 1811
Score = 56.6 bits (135), Expect = 1e-06
Identities = 52/183 (28%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR-----FQQTVCLIVYGD 179
K++ + LPSG LT ++NS+F I + YA+ + K + F ++ YGD
Sbjct: 1602 KLYYWSKSLPSGHFLTSIINSIFVNIAMCYAFVESQEKGNRSEENIRVFFNDFSIVTYGD 1661
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF---L 350
D++I V FN + L + T I+S+ E+ F+KR F
Sbjct: 1662 DHVIGVPEKYVEDFNQLTLPKLLKTLGLDYTMEDKDRICDIKSRKLEEVTFIKRSFRYVK 1721
Query: 351 KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 530
+LD + APLD+ +I + W Q SGE + + NV+ AL EL
Sbjct: 1722 ELDRWL--APLDLNSILDCMNW---------------QRSGEDEGLNAQA-NVSFALKEL 1763
Query: 531 YLH 539
LH
Sbjct: 1764 SLH 1766
[194][TOP]
>UniRef100_B2BHW5 Non-structural polyprotein n=1 Tax=Black queen cell virus
RepID=B2BHW5_9VIRU
Length = 1628
Score = 56.2 bits (134), Expect = 2e-06
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Frame = +3
Query: 39 LPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVYGDDNLISVAPSC 209
LPSG LT ++NSVF +++ + + PK F + ++ YGDD+++SV
Sbjct: 1430 LPSGHYLTAIINSVFVNLVMCLVFMEANPKYSFTTASSFFRECGIVAYGDDHVVSVPEKY 1489
Query: 210 ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRK-----FLKLDTGVIQ 374
S FN + + V +++ + TIE+K E+DFL RK +LK + +
Sbjct: 1490 LSVFNQQTLPVLMSKFGMFY---------TIETKDDTEIDFLSRKLEDVSYLKRNFVYDE 1540
Query: 375 ------APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 536
APL + I W S+ DV+ + N+ AL EL L
Sbjct: 1541 PRQRYIAPLSLDVILEMPMWTKSSR----------------DVVTNVFCNLEHALKELSL 1584
Query: 537 HN 542
H+
Sbjct: 1585 HD 1586
[195][TOP]
>UniRef100_A4UVR5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=Citrus mosaic
sadwavirus RepID=A4UVR5_SDV
Length = 319
Score = 56.2 bits (134), Expect = 2e-06
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Frame = +3
Query: 144 FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWE 323
F + + +YGDDN +SVA + AS +N E I L+ VK+ DG+ K P E
Sbjct: 23 FYEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA-KSGTIKPFIPLEE 81
Query: 324 LDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 497
+DFLKR+F+ D+G I PL +I L+++ G D + L
Sbjct: 82 VDFLKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELAAL 124
Query: 498 VLNVNVALMELYLH 539
LNV AL E + H
Sbjct: 125 ELNVATALCEAFFH 138
[196][TOP]
>UniRef100_Q27YG9 RNA-directed RNA polymerase n=1 Tax=Nora virus RepID=POLR_NORAV
Length = 2104
Score = 56.2 bits (134), Expect = 2e-06
Identities = 45/142 (31%), Positives = 64/142 (45%)
Frame = +3
Query: 12 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 191
Q V+K N G SG T + N + N+I YA+ K ++Q V + +GDD +
Sbjct: 1896 QTVYKTNRGNKSGSYTTTIDNCLANDIYGLYAWVKTTGLRSLWDYRQNVSSVAFGDDIIK 1955
Query: 192 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGVI 371
SV+ +N R L +T GS KD F L FLKR F KL+ G++
Sbjct: 1956 SVSDEYKDKYNYCTYRDVLNATGHIMTPGS-KDGEEKPFTSFENLQFLKRGF-KLENGMV 2013
Query: 372 QAPLDMTAIFSSLYWLTPSKDK 437
APL +I W +D+
Sbjct: 2014 LAPLLQRSIEGPFVWTDIREDQ 2035
[197][TOP]
>UniRef100_Q27J85 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Maizuru/6728/JP
RepID=Q27J85_9CALI
Length = 366
Score = 55.8 bits (133), Expect = 2e-06
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 173
+V F GLPSG T VVNS+ + I + A + P Q + Y
Sbjct: 31 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 90
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLK 353
GDD + SV P+ AS F+ +T K D S+ PT + P FLKR F +
Sbjct: 91 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSEAIKPT--NTPV----FLKRTFTQ 144
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSK 431
GV +A LD+T+I YWL ++
Sbjct: 145 TPHGV-RALLDITSITRQFYWLKANR 169
[198][TOP]
>UniRef100_B3F392 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
RNA virus RepID=B3F392_9VIRU
Length = 139
Score = 55.8 bits (133), Expect = 2e-06
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 42 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 221
PSG LTV++N + N + +RYAY L F+ V L+ YGDDN+++V SWF
Sbjct: 59 PSGHPLTVIINGLVNSLYMRYAYTVLNEYGHCNDFKSNVNLMTYGDDNILNVNKD-ISWF 117
Query: 222 NGEAIRVTLAE 254
N +I LAE
Sbjct: 118 NHTSISQALAE 128
[199][TOP]
>UniRef100_B1A455 Replication-associated polyprotein (Fragment) n=1 Tax=Black raspberry
necrosis virus RepID=B1A455_9SECO
Length = 983
Score = 55.8 bits (133), Expect = 2e-06
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Frame = +3
Query: 15 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVCLI-VYGD 179
+++ V G PSGFALTV++NS+ N+ + +A+RK ++P R ++ C VYGD
Sbjct: 875 ELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMARISPSMVTYRIMRSHCTFSVYGD 934
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDG 278
DN++S + + +N I L V ++DG
Sbjct: 935 DNVVSFSLAVRDMYNLCTIADELKTIGVTLSDG 967
[200][TOP]
>UniRef100_Q8B594 Nonstructural polyprotein n=1 Tax=Aphid lethal paralysis virus
RepID=Q8B594_ALPV
Length = 2035
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL---APKPEKCRFQQTVCLIVYGDDNL 188
++ V G+PSG T ++NS+ N + ++ + P F + I YGDD +
Sbjct: 1821 IYYVRNGIPSGCPATAILNSIVNHCCLADSWLDIMDGTPYATMNSFFEHTSSIFYGDDFI 1880
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF-LKLDTG 365
+++ P +N E + L + K ++++ E+ FLKRKF + G
Sbjct: 1881 MNIRPEVIDVYNQETLTPVLKKNLEMTMTDEAKTGECVKARTLEEVSFLKRKFRFESFVG 1940
Query: 366 VIQAPLDMTAIFSSLYWL 419
+ AP+D+ I + W+
Sbjct: 1941 LWVAPIDIDVILDAPNWV 1958
[201][TOP]
>UniRef100_Q80AG3 Non-structural polyprotein n=1 Tax=Kashmir bee virus
RepID=Q80AG3_9VIRU
Length = 1933
Score = 54.7 bits (130), Expect = 5e-06
Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 8/184 (4%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYR----KLAPKPEKCRFQQTVCLIVYGDDN 185
V+ + PSG T +N N + +R + K A K F + V L+ YGDDN
Sbjct: 1728 VYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATKAAVKMTMRDFSKHVSLVSYGDDN 1787
Query: 186 LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-LK 353
+I+ + ++W+N I + TD G + P S ++ +LKRKF
Sbjct: 1788 VINFSDEVSAWYNMSTIAEAFSTLGFTYTDELKGVRGEVPNWRS--IQDVQYLKRKFRYD 1845
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 533
V +APL M I W G +D+ E LN A+MEL
Sbjct: 1846 NQRKVWEAPLCMDTILEMPNWC----------------RGGLDIQEGTKLNCENAIMELS 1889
Query: 534 LHND 545
+H +
Sbjct: 1890 MHEE 1893
[202][TOP]
>UniRef100_O56050 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
RepID=O56050_9VIRU
Length = 1998
Score = 54.7 bits (130), Expect = 5e-06
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 179
G ++ V G+PSG +T +NS+ N++ + Y + + P K F + + YGD
Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALVYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
D ++++ FN I +++ + K ++ + E++FLKR F +
Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897
Query: 360 TGVIQ--APLDMTAIFSSLYW 416
T + + APLD+T I S W
Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918
[203][TOP]
>UniRef100_B3TZF0 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees
RepID=B3TZF0_9VIRU
Length = 1950
Score = 54.7 bits (130), Expect = 5e-06
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 8/184 (4%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDN 185
V+ + PSG T +N N + +R + ++ A K F + V ++ YGDDN
Sbjct: 1745 VYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICAKEAAVKMTMKDFGKHVSMVSYGDDN 1804
Query: 186 LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIESKPFWELDFLKRKF-LK 353
+I+ + W+N E I TD G++ + P S ++ +LKRKF
Sbjct: 1805 VINFSDEVCEWYNMETIAKAFETLGFTYTDELKGANGEVPKWRS--IKDVQYLKRKFRYD 1862
Query: 354 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 533
V +APL M I W G +D+ E LN A+MEL
Sbjct: 1863 EQRKVWEAPLCMDTILEMPNWC----------------RGGLDIQEGTKLNCENAIMELS 1906
Query: 534 LHND 545
+H +
Sbjct: 1907 MHEE 1910
[204][TOP]
>UniRef100_A9QXE1 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
RepID=A9QXE1_9VIRU
Length = 1998
Score = 54.7 bits (130), Expect = 5e-06
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 179
G ++ V G+PSG +T +NS+ N++ + Y + + P K F + + YGD
Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALIYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838
Query: 180 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLD 359
D ++++ FN I +++ + K ++ + E++FLKR F +
Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897
Query: 360 TGVIQ--APLDMTAIFSSLYW 416
T + + APLD+T I S W
Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918
[205][TOP]
>UniRef100_Q994T0 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T0_9VIRU
Length = 174
Score = 54.3 bits (129), Expect = 7e-06
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSRERGQTWESFKQNVELFCY 83
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFL- 350
GDD ++SV FN I LA+ + TD ++K + FLK F
Sbjct: 84 GDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEEVVAYTTLLNSTFLKHGFRP 142
Query: 351 -KLDTGVIQAPLDMTAIFSSLYWLTPSKD 434
++ + Q+ L ++I + W+ D
Sbjct: 143 HEVYPHLWQSALAWSSINDTTQWIWECAD 171
[206][TOP]
>UniRef100_C1JCT1 Putative nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 3
RepID=C1JCT1_9VIRU
Length = 2580
Score = 54.3 bits (129), Expect = 7e-06
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQTVCLIV 170
G + V+ G+PSG T +NS N+I+I AY + + ++ ++ VC +
Sbjct: 1966 GNSILLVHGGMPSGCVPTAPLNSKVNDIMIYTAYVNILRRADRGDITSYRYYRDLVCRLF 2025
Query: 171 YGDDNLISVAPSCASWFNGEAIRVTLAEKK-----VKITDGSDKD-APTIESKPFWELDF 332
YGDD +I+V S A FN + TL+E+ + +TDGS D P E+ L F
Sbjct: 2026 YGDDVIIAVDDSIADIFNCQ----TLSEEMKILFGMNMTDGSKSDIIPKFET--IETLSF 2079
Query: 333 LKRKF--LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLN 506
+ R F LK I L +I + Y+ T + H Q E + EE N
Sbjct: 2080 ISRFFRPLKHQENFIVGALKKISIQTHFYYATDDTPE-HFGQVFKTIQEEAALWEEEYFN 2138
Query: 507 VNVALMELYLHNDPKEFQRVRSF 575
++ Y+ ++F + F
Sbjct: 2139 ----KIQSYIQEIIRKFPEISKF 2157
[207][TOP]
>UniRef100_A5HB92 Non-structural protein n=1 Tax=Solenopsis invicta virus 2
RepID=A5HB92_9VIRU
Length = 2153
Score = 54.3 bits (129), Expect = 7e-06
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 3/137 (2%)
Frame = +3
Query: 18 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQ---QTVCLIVYGDDNL 188
+++ + G+ SGF T VN++ + +LI Y L K F+ + V I+YGDD L
Sbjct: 1947 IYQKSRGIISGFPGTAEVNTLAHILLIVCIYLMLVAKTIWDSFEMFLRMVSAILYGDDIL 2006
Query: 189 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKFLKLDTGV 368
+++ FNG+ I+ +T + K + +E+KP + FLK + +L G
Sbjct: 2007 LTIHDDILHLFNGKTIQREYERLGYTVTSAT-KSSEIVEAKPLSQCQFLKSSWRQLLPGY 2065
Query: 369 IQAPLDMTAIFSSLYWL 419
LD+ + ++W+
Sbjct: 2066 YIRVLDLEVAYDLVHWV 2082
[208][TOP]
>UniRef100_Q9WCE9 Polyprotein n=1 Tax=Sacbrood virus RepID=Q9WCE9_9VIRU
Length = 2858
Score = 53.9 bits (128), Expect = 9e-06
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 2651 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 2710
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
GDD ++SV FN I LA+ + TD + D
Sbjct: 2711 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 2749
[209][TOP]
>UniRef100_Q994U1 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994U1_9VIRU
Length = 174
Score = 53.9 bits (128), Expect = 9e-06
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
GDD ++SV FN I LA+ + TD + D
Sbjct: 84 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122
[210][TOP]
>UniRef100_Q994T9 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T9_9VIRU
Length = 174
Score = 53.9 bits (128), Expect = 9e-06
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGNKERGQTWESFKQNVELFCY 83
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
GDD ++SV FN I LA+ + TD + D
Sbjct: 84 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122
[211][TOP]
>UniRef100_Q994T5 Polyprotein (Fragment) n=3 Tax=Sacbrood virus RepID=Q994T5_9VIRU
Length = 174
Score = 53.9 bits (128), Expect = 9e-06
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
GDD ++SV FN I LA+ + TD + D
Sbjct: 84 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122
[212][TOP]
>UniRef100_Q994S9 Polyprotein (Fragment) n=2 Tax=Sacbrood virus RepID=Q994S9_9VIRU
Length = 174
Score = 53.9 bits (128), Expect = 9e-06
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 4/118 (3%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSRERGQTWESFKQNVELFCY 83
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIESKPFWELDFLKRKF 347
GDD ++SV FN I LA+ + TD ++K + FLK F
Sbjct: 84 GDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEEVVAYTTLLNSTFLKHGF 140
[213][TOP]
>UniRef100_Q80MT3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sacbrood virus
RepID=Q80MT3_9VIRU
Length = 186
Score = 53.9 bits (128), Expect = 9e-06
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 31 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 90
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
GDD ++SV FN I LA+ + TD + D
Sbjct: 91 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 129
[214][TOP]
>UniRef100_Q80MT2 RNA-dependent RNA polymerase (Fragment) n=5 Tax=Sacbrood virus
RepID=Q80MT2_9VIRU
Length = 186
Score = 53.9 bits (128), Expect = 9e-06
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +3
Query: 6 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 173
V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y
Sbjct: 28 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 87
Query: 174 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 290
GDD ++SV FN I LA+ + TD + D
Sbjct: 88 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 126
[215][TOP]
>UniRef100_Q1XEP0 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
RepID=Q1XEP0_9SECO
Length = 239
Score = 53.9 bits (128), Expect = 9e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V
Sbjct: 186 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239
[216][TOP]
>UniRef100_Q1XEN9 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
RepID=Q1XEN9_9SECO
Length = 239
Score = 53.9 bits (128), Expect = 9e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V
Sbjct: 186 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239
[217][TOP]
>UniRef100_Q1XEN8 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
RepID=Q1XEN8_9SECO
Length = 239
Score = 53.9 bits (128), Expect = 9e-06
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 9 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 170
G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V
Sbjct: 186 GADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239