[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 217 bits (553), Expect = 4e-55
Identities = 106/191 (55%), Positives = 135/191 (70%), Gaps = 3/191 (1%)
Frame = +3
Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 205 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 264
Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 265 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 324
Query: 372 IRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 542
I+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ K TN+
Sbjct: 325 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 384
Query: 543 VNAFAIMCATT 575
VNAFAIMCATT
Sbjct: 385 VNAFAIMCATT 395
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 217 bits (553), Expect = 4e-55
Identities = 106/191 (55%), Positives = 135/191 (70%), Gaps = 3/191 (1%)
Frame = +3
Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 1015 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 1074
Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
+ Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 1075 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 1134
Query: 372 IRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 542
I+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ K TN+
Sbjct: 1135 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 1194
Query: 543 VNAFAIMCATT 575
VNAFAIMCATT
Sbjct: 1195 VNAFAIMCATT 1205
[3][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 213 bits (543), Expect = 6e-54
Identities = 105/192 (54%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG
Sbjct: 26 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 85
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE +ES
Sbjct: 86 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 145
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 539
E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K E N
Sbjct: 146 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 205
Query: 540 FVNAFAIMCATT 575
VNAF+IMCATT
Sbjct: 206 HVNAFSIMCATT 217
[4][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 213 bits (543), Expect = 6e-54
Identities = 105/192 (54%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG
Sbjct: 1046 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 1105
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE +ES
Sbjct: 1106 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 1165
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 539
E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K E N
Sbjct: 1166 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 1225
Query: 540 FVNAFAIMCATT 575
VNAF+IMCATT
Sbjct: 1226 HVNAFSIMCATT 1237
[5][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 208 bits (530), Expect = 2e-52
Identities = 96/193 (49%), Positives = 135/193 (69%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT
Sbjct: 1034 TKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGT 1093
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 1094 IPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGF 1153
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536
++YI IHGI+++ LC++INY Q F WFM+ T + +P+R++NL K V+ T
Sbjct: 1154 QYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVT 1213
Query: 537 NFVNAFAIMCATT 575
NFVNA AIMCATT
Sbjct: 1214 NFVNALAIMCATT 1226
[6][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 208 bits (529), Expect = 3e-52
Identities = 102/192 (53%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR+ +W
Sbjct: 201 TNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRVFLWEH 260
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
+ + + H + G IQ+ +TANFG GA+FW++PLS+P AP+ VE+KF
Sbjct: 261 SQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQTVETKF 319
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMKGVECTN 539
EFYIRI GID PDLC+QINY+QRFGWFM+ P + T E +PSR+ N+ +K +C N
Sbjct: 320 EFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVN 379
Query: 540 FVNAFAIMCATT 575
F NAFAIMCATT
Sbjct: 380 FTNAFAIMCATT 391
[7][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 207 bits (526), Expect = 6e-52
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Frame = +3
Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P
Sbjct: 204 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 263
Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y
Sbjct: 264 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 323
Query: 372 IRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 545
I+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K V+ TNFV
Sbjct: 324 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 383
Query: 546 NAFAIMCATT 575
NA AI+CATT
Sbjct: 384 NALAILCATT 393
[8][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 207 bits (526), Expect = 6e-52
Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
Frame = +3
Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P
Sbjct: 1041 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 1100
Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y
Sbjct: 1101 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 1160
Query: 372 IRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 545
I+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K V+ TNFV
Sbjct: 1161 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 1220
Query: 546 NAFAIMCATT 575
NA AI+CATT
Sbjct: 1221 NALAILCATT 1230
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 206 bits (525), Expect = 8e-52
Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 201 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 260
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 261 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 320
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536
++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K V+ T
Sbjct: 321 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 380
Query: 537 NFVNAFAIMCATT 575
NFVNA AIMCATT
Sbjct: 381 NFVNALAIMCATT 393
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 206 bits (525), Expect = 8e-52
Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 1033 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 1092
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 1093 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 1152
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536
++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K V+ T
Sbjct: 1153 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 1212
Query: 537 NFVNAFAIMCATT 575
NFVNA AIMCATT
Sbjct: 1213 NFVNALAIMCATT 1225
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 112 bits (279), Expect = 3e-23
Identities = 59/191 (30%), Positives = 99/191 (51%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL I +W
Sbjct: 214 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSK 272
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
+ H D G + +L I+ FY+++ +G GA + L SPM+P +++ F
Sbjct: 273 EQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPF 332
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542
+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T +
Sbjct: 333 DMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 392
Query: 543 VNAFAIMCATT 575
NAF MC T+
Sbjct: 393 TNAFLQMCQTS 403
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 110 bits (275), Expect = 8e-23
Identities = 60/191 (31%), Positives = 99/191 (51%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 202 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 260
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F
Sbjct: 261 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 320
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542
+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T +
Sbjct: 321 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 380
Query: 543 VNAFAIMCATT 575
NAF MC T+
Sbjct: 381 TNAFLQMCQTS 391
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 110 bits (275), Expect = 8e-23
Identities = 60/191 (31%), Positives = 99/191 (51%)
Frame = +3
Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 885 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 943
Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F
Sbjct: 944 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 1003
Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542
+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T +
Sbjct: 1004 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 1063
Query: 543 VNAFAIMCATT 575
NAF MC T+
Sbjct: 1064 TNAFLQMCQTS 1074
[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 59.7 bits (143), Expect = 2e-07
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Frame = +3
Query: 45 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 215
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 216 HCDIVEGGSG-ELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 392
C I GG ++IQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 393 SQPD-LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 557
+ D + I F W + FQ +P+R+S+LV+ G T NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 59.3 bits (142), Expect = 2e-07
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
Frame = +3
Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
+ F ++P+ +P + + K T N + + A T
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406
[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 58.9 bits (141), Expect = 3e-07
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 6/176 (3%)
Frame = +3
Query: 66 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 239
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 240 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 407
E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350
Query: 408 CKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
F ++P+ +P + + K T N + + A T
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406
[17][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 58.2 bits (139), Expect = 5e-07
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Frame = +3
Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 410
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 411 KQINYRQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
+ + + WF ++P+ +P + + K T N + + A T
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406
[18][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
Frame = +3
Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347
Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
+ F ++P+ +P + + K T N + + A T
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 404
[19][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
Frame = +3
Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935
Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
+ F ++P+ +P + + K T N + + A T
Sbjct: 936 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 992
[20][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 56.6 bits (135), Expect = 1e-06
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
Frame = +3
Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
G E+ ++ +S++ + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
+ F ++P+ +P + + K T N + + A T
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406