BB910574 ( RCE09546 )

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[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  217 bits (553), Expect = 4e-55
 Identities = 106/191 (55%), Positives = 135/191 (70%), Gaps = 3/191 (1%)
 Frame = +3

Query: 12  PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
           PL+ A +  ++SG   YSYA G+LSHFLG+GGT+ F +  TSS FV+ +LR+ +WG T T
Sbjct: 205 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 264

Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
           + Q  QMPH D        LKIQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 265 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 324

Query: 372 IRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 542
           I+I GID+ P +C+QINY QRF WF ++RP      K  ++ +PSRV N+  K    TN+
Sbjct: 325 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 384

Query: 543 VNAFAIMCATT 575
           VNAFAIMCATT
Sbjct: 385 VNAFAIMCATT 395

[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  217 bits (553), Expect = 4e-55
 Identities = 106/191 (55%), Positives = 135/191 (70%), Gaps = 3/191 (1%)
 Frame = +3

Query: 12   PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
            PL+ A +  ++SG   YSYA G+LSHFLG+GGT+ F +  TSS FV+ +LR+ +WG T T
Sbjct: 1015 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 1074

Query: 192  IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
            + Q  QMPH D        LKIQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 1075 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 1134

Query: 372  IRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 542
            I+I GID+ P +C+QINY QRF WF ++RP      K  ++ +PSRV N+  K    TN+
Sbjct: 1135 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 1194

Query: 543  VNAFAIMCATT 575
            VNAFAIMCATT
Sbjct: 1195 VNAFAIMCATT 1205

[3][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  213 bits (543), Expect = 6e-54
 Identities = 105/192 (54%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
 Frame = +3

Query: 3   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
           T  PL+ A K V+ S   +YSYA G+LSHFLGVGG + F V  TSS FVS +LR+ +WG 
Sbjct: 26  TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 85

Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
             T+ Q  QMPH D+  G +  LKIQSPFY+TAN G   A FWV P+SSPMAPE +ES  
Sbjct: 86  QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 145

Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 539
           E+YI+I GI++   LC+ INY+Q FGWF +VR   T+KE  + +PSR++N+  K  E  N
Sbjct: 146 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 205

Query: 540 FVNAFAIMCATT 575
            VNAF+IMCATT
Sbjct: 206 HVNAFSIMCATT 217

[4][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  213 bits (543), Expect = 6e-54
 Identities = 105/192 (54%), Positives = 133/192 (69%), Gaps = 1/192 (0%)
 Frame = +3

Query: 3    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
            T  PL+ A K V+ S   +YSYA G+LSHFLGVGG + F V  TSS FVS +LR+ +WG 
Sbjct: 1046 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 1105

Query: 183  TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
              T+ Q  QMPH D+  G +  LKIQSPFY+TAN G   A FWV P+SSPMAPE +ES  
Sbjct: 1106 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 1165

Query: 363  EFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 539
            E+YI+I GI++   LC+ INY+Q FGWF +VR   T+KE  + +PSR++N+  K  E  N
Sbjct: 1166 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 1225

Query: 540  FVNAFAIMCATT 575
             VNAF+IMCATT
Sbjct: 1226 HVNAFSIMCATT 1237

[5][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  208 bits (530), Expect = 2e-52
 Identities = 96/193 (49%), Positives = 135/193 (69%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
            T +P++LA +  + +  + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT
Sbjct: 1034 TKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGT 1093

Query: 183  TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
             PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F
Sbjct: 1094 IPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGF 1153

Query: 363  EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536
            ++YI IHGI+++  LC++INY Q F WFM+      T     + +P+R++NL  K V+ T
Sbjct: 1154 QYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVT 1213

Query: 537  NFVNAFAIMCATT 575
            NFVNA AIMCATT
Sbjct: 1214 NFVNALAIMCATT 1226

[6][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  208 bits (529), Expect = 3e-52
 Identities = 102/192 (53%), Positives = 135/192 (70%), Gaps = 1/192 (0%)
 Frame = +3

Query: 3   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
           T  PL+ AEKS+T++  ETYSY+ G+LSHFLG+GG +RF VHSTSS  ++ KLR+ +W  
Sbjct: 201 TNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRVFLWEH 260

Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
           +    +  +  H   + G      IQ+   +TANFG  GA+FW++PLS+P AP+ VE+KF
Sbjct: 261 SQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQTVETKF 319

Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMKGVECTN 539
           EFYIRI GID  PDLC+QINY+QRFGWFM+ P + T  E    +PSR+ N+ +K  +C N
Sbjct: 320 EFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVN 379

Query: 540 FVNAFAIMCATT 575
           F NAFAIMCATT
Sbjct: 380 FTNAFAIMCATT 391

[7][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  207 bits (526), Expect = 6e-52
 Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
 Frame = +3

Query: 12  PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
           P++LA K  +TSG   YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P 
Sbjct: 204 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 263

Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
             Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+Y
Sbjct: 264 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 323

Query: 372 IRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 545
           I+I GI++ P LC++INY+QRF W ++      K    ++ +PSR+ NL  K V+ TNFV
Sbjct: 324 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 383

Query: 546 NAFAIMCATT 575
           NA AI+CATT
Sbjct: 384 NALAILCATT 393

[8][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  207 bits (526), Expect = 6e-52
 Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%)
 Frame = +3

Query: 12   PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191
            P++LA K  +TSG   YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P 
Sbjct: 1041 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 1100

Query: 192  IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371
              Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+Y
Sbjct: 1101 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 1160

Query: 372  IRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 545
            I+I GI++ P LC++INY+QRF W ++      K    ++ +PSR+ NL  K V+ TNFV
Sbjct: 1161 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 1220

Query: 546  NAFAIMCATT 575
            NA AI+CATT
Sbjct: 1221 NALAILCATT 1230

[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  206 bits (525), Expect = 8e-52
 Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
           T +P++LA +  + +  + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 201 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 260

Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
            PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F
Sbjct: 261 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 320

Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536
           ++YI IHGI  + +LC++INY Q F WFM+      T     + +P+R++NL  K V+ T
Sbjct: 321 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 380

Query: 537 NFVNAFAIMCATT 575
           NFVNA AIMCATT
Sbjct: 381 NFVNALAIMCATT 393

[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  206 bits (525), Expect = 8e-52
 Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
            T +P++LA +  + +  + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 1033 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 1092

Query: 183  TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
             PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F
Sbjct: 1093 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 1152

Query: 363  EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536
            ++YI IHGI  + +LC++INY Q F WFM+      T     + +P+R++NL  K V+ T
Sbjct: 1153 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 1212

Query: 537  NFVNAFAIMCATT 575
            NFVNA AIMCATT
Sbjct: 1213 NFVNALAIMCATT 1225

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  112 bits (279), Expect = 3e-23
 Identities = 59/191 (30%), Positives = 99/191 (51%)
 Frame = +3

Query: 3   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
           T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ KL I +W  
Sbjct: 214 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSK 272

Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
              +       H D   G + +L I+  FY+++ +G  GA   +  L SPM+P  +++ F
Sbjct: 273 EQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPF 332

Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542
           +   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + ++ T +
Sbjct: 333 DMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 392

Query: 543 VNAFAIMCATT 575
            NAF  MC T+
Sbjct: 393 TNAFLQMCQTS 403

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  110 bits (275), Expect = 8e-23
 Identities = 60/191 (31%), Positives = 99/191 (51%)
 Frame = +3

Query: 3   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
           T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ + RI +W  
Sbjct: 202 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 260

Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
              I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F
Sbjct: 261 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 320

Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542
           +   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + ++ T +
Sbjct: 321 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 380

Query: 543 VNAFAIMCATT 575
            NAF  MC T+
Sbjct: 381 TNAFLQMCQTS 391

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  110 bits (275), Expect = 8e-23
 Identities = 60/191 (31%), Positives = 99/191 (51%)
 Frame = +3

Query: 3    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182
            T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ + RI +W  
Sbjct: 885  TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 943

Query: 183  TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362
               I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F
Sbjct: 944  EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 1003

Query: 363  EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542
            +   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + ++ T +
Sbjct: 1004 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 1063

Query: 543  VNAFAIMCATT 575
             NAF  MC T+
Sbjct: 1064 TNAFLQMCQTS 1074

[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
           RepID=Q65624_9SECO
          Length = 557

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
 Frame = +3

Query: 45  SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 215
           SG  T YS+          VGG +  +V  T SK +SC++ +I+    T   + Q  ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317

Query: 216 HCDIVEGGSG-ELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 392
            C I  GG    ++IQ+PF     F + G Q  +  +  PM  + + + +++ +    I 
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376

Query: 393 SQPD-LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 557
            + D   + I     F W  +        FQ  +P+R+S+LV+ G   T   NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430

[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
 Frame = +3

Query: 63  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349

Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
           +         F    ++P+         +P  + +   K    T   N  + + A T
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406

[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 6/176 (3%)
 Frame = +3

Query: 66  YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 239
           Y+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290

Query: 240 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 407
             E+ I++ F+S A       +  ++PLS P+AP+     +EF + I+    DSQ  P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350

Query: 408 CKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
                    F    ++P+         +P  + +   K    T   N  + + A T
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406

[17][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
 Frame = +3

Query: 63  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289

Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 410
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I+    DSQ    
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348

Query: 411 KQINYRQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
              +  + + WF    ++P+         +P  + +   K    T   N  + + A T
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406

[18][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
 Frame = +3

Query: 63  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287

Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347

Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
           +         F    ++P+         +P  + +   K    T   N  + + A T
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 404

[19][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%)
 Frame = +3

Query: 63   SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
            SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 816  SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875

Query: 237  GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
            G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 876  GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935

Query: 405  LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
            +         F    ++P+         +P  + +   K    T   N  + + A T
Sbjct: 936  MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 992

[20][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 6/177 (3%)
 Frame = +3

Query: 63  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404
           G  E+  ++  +S++       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349

Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575
           +         F    ++P+         +P  + +   K    T   N  + + A T
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406