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[1][TOP] >UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=UPI0000163D16 Length = 514 Score = 217 bits (553), Expect = 4e-55 Identities = 106/191 (55%), Positives = 135/191 (70%), Gaps = 3/191 (1%) Frame = +3 Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191 PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T Sbjct: 205 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 264 Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371 + Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y Sbjct: 265 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 324 Query: 372 IRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 542 I+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ K TN+ Sbjct: 325 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 384 Query: 543 VNAFAIMCATT 575 VNAFAIMCATT Sbjct: 385 VNAFAIMCATT 395 [2][TOP] >UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV Length = 1324 Score = 217 bits (553), Expect = 4e-55 Identities = 106/191 (55%), Positives = 135/191 (70%), Gaps = 3/191 (1%) Frame = +3 Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191 PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T Sbjct: 1015 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 1074 Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371 + Q QMPH D LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y Sbjct: 1075 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 1134 Query: 372 IRIHGIDSQPDLCKQINYRQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 542 I+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ K TN+ Sbjct: 1135 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 1194 Query: 543 VNAFAIMCATT 575 VNAFAIMCATT Sbjct: 1195 VNAFAIMCATT 1205 [3][TOP] >UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6XPY1_9SECO Length = 330 Score = 213 bits (543), Expect = 6e-54 Identities = 105/192 (54%), Positives = 133/192 (69%), Gaps = 1/192 (0%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG Sbjct: 26 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 85 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE +ES Sbjct: 86 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 145 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 539 E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K E N Sbjct: 146 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 205 Query: 540 FVNAFAIMCATT 575 VNAF+IMCATT Sbjct: 206 HVNAFSIMCATT 217 [4][TOP] >UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6JX06_9SECO Length = 1350 Score = 213 bits (543), Expect = 6e-54 Identities = 105/192 (54%), Positives = 133/192 (69%), Gaps = 1/192 (0%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG Sbjct: 1046 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 1105 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 T+ Q QMPH D+ G + LKIQSPFY+TAN G A FWV P+SSPMAPE +ES Sbjct: 1106 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 1165 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 539 E+YI+I GI++ LC+ INY+Q FGWF +VR T+KE + +PSR++N+ K E N Sbjct: 1166 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 1225 Query: 540 FVNAFAIMCATT 575 VNAF+IMCATT Sbjct: 1226 HVNAFSIMCATT 1237 [5][TOP] >UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO Length = 1344 Score = 208 bits (530), Expect = 2e-52 Identities = 96/193 (49%), Positives = 135/193 (69%), Gaps = 2/193 (1%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT Sbjct: 1034 TKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGT 1093 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F Sbjct: 1094 IPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGF 1153 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536 ++YI IHGI+++ LC++INY Q F WFM+ T + +P+R++NL K V+ T Sbjct: 1154 QYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVT 1213 Query: 537 NFVNAFAIMCATT 575 NFVNA AIMCATT Sbjct: 1214 NFVNALAIMCATT 1226 [6][TOP] >UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus RepID=Q64959_9SECO Length = 510 Score = 208 bits (529), Expect = 3e-52 Identities = 102/192 (53%), Positives = 135/192 (70%), Gaps = 1/192 (0%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR+ +W Sbjct: 201 TNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRVFLWEH 260 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 + + + H + G IQ+ +TANFG GA+FW++PLS+P AP+ VE+KF Sbjct: 261 SQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQTVETKF 319 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMKGVECTN 539 EFYIRI GID PDLC+QINY+QRFGWFM+ P + T E +PSR+ N+ +K +C N Sbjct: 320 EFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVN 379 Query: 540 FVNAFAIMCATT 575 F NAFAIMCATT Sbjct: 380 FTNAFAIMCATT 391 [7][TOP] >UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE Length = 520 Score = 207 bits (526), Expect = 6e-52 Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%) Frame = +3 Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191 P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P Sbjct: 204 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 263 Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371 Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y Sbjct: 264 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 323 Query: 372 IRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 545 I+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K V+ TNFV Sbjct: 324 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 383 Query: 546 NAFAIMCATT 575 NA AI+CATT Sbjct: 384 NALAILCATT 393 [8][TOP] >UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV Length = 1357 Score = 207 bits (526), Expect = 6e-52 Identities = 102/190 (53%), Positives = 133/190 (70%), Gaps = 2/190 (1%) Frame = +3 Query: 12 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 191 P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P Sbjct: 1041 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 1100 Query: 192 IAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 371 Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y Sbjct: 1101 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 1160 Query: 372 IRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 545 I+I GI++ P LC++INY+QRF W ++ K ++ +PSR+ NL K V+ TNFV Sbjct: 1161 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 1220 Query: 546 NAFAIMCATT 575 NA AI+CATT Sbjct: 1221 NALAILCATT 1230 [9][TOP] >UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B Length = 511 Score = 206 bits (525), Expect = 8e-52 Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 2/193 (1%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT Sbjct: 201 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 260 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F Sbjct: 261 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 320 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536 ++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K V+ T Sbjct: 321 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 380 Query: 537 NFVNAFAIMCATT 575 NFVNA AIMCATT Sbjct: 381 NFVNALAIMCATT 393 [10][TOP] >UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO Length = 1343 Score = 206 bits (525), Expect = 8e-52 Identities = 98/193 (50%), Positives = 134/193 (69%), Gaps = 2/193 (1%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT Sbjct: 1033 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 1092 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F Sbjct: 1093 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 1152 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 536 ++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K V+ T Sbjct: 1153 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 1212 Query: 537 NFVNAFAIMCATT 575 NFVNA AIMCATT Sbjct: 1213 NFVNALAIMCATT 1225 [11][TOP] >UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus RepID=Q1T7B1_CNSV Length = 569 Score = 112 bits (279), Expect = 3e-23 Identities = 59/191 (30%), Positives = 99/191 (51%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL I +W Sbjct: 214 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSK 272 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 + H D G + +L I+ FY+++ +G GA + L SPM+P +++ F Sbjct: 273 EQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPF 332 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542 + +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T + Sbjct: 333 DMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 392 Query: 543 VNAFAIMCATT 575 NAF MC T+ Sbjct: 393 TNAFLQMCQTS 403 [12][TOP] >UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus RepID=UPI0000164A26 Length = 564 Score = 110 bits (275), Expect = 8e-23 Identities = 60/191 (31%), Positives = 99/191 (51%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W Sbjct: 202 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 260 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F Sbjct: 261 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 320 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542 + +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T + Sbjct: 321 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 380 Query: 543 VNAFAIMCATT 575 NAF MC T+ Sbjct: 381 TNAFLQMCQTS 391 [13][TOP] >UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV Length = 1240 Score = 110 bits (275), Expect = 8e-23 Identities = 60/191 (31%), Positives = 99/191 (51%) Frame = +3 Query: 3 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 182 T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W Sbjct: 885 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 943 Query: 183 TPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 362 I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F Sbjct: 944 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 1003 Query: 363 EFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 542 + +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T + Sbjct: 1004 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 1063 Query: 543 VNAFAIMCATT 575 NAF MC T+ Sbjct: 1064 TNAFLQMCQTS 1074 [14][TOP] >UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus RepID=Q65624_9SECO Length = 557 Score = 59.7 bits (143), Expect = 2e-07 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%) Frame = +3 Query: 45 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 215 SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317 Query: 216 HCDIVEGGSG-ELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 392 C I GG ++IQ+PF F + G Q + + PM + + + +++ + I Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376 Query: 393 SQPD-LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 557 + D + I F W + FQ +P+R+S+LV+ G T NA A Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430 [15][TOP] >UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV Length = 515 Score = 59.3 bits (142), Expect = 2e-07 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 6/177 (3%) Frame = +3 Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236 SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289 Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404 G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349 Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575 + F ++P+ +P + + K T N + + A T Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406 [16][TOP] >UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV Length = 515 Score = 58.9 bits (141), Expect = 3e-07 Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 6/176 (3%) Frame = +3 Query: 66 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 239 Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290 Query: 240 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 407 E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P + Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350 Query: 408 CKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575 F ++P+ +P + + K T N + + A T Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406 [17][TOP] >UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV Length = 515 Score = 58.2 bits (139), Expect = 5e-07 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 7/178 (3%) Frame = +3 Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289 Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 410 G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348 Query: 411 KQINYRQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575 + + + WF ++P+ +P + + K T N + + A T Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406 [18][TOP] >UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862 Length = 513 Score = 57.4 bits (137), Expect = 8e-07 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%) Frame = +3 Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287 Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404 G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347 Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575 + F ++P+ +P + + K T N + + A T Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 404 [19][TOP] >UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV Length = 1101 Score = 57.4 bits (137), Expect = 8e-07 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 6/177 (3%) Frame = +3 Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875 Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404 G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935 Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575 + F ++P+ +P + + K T N + + A T Sbjct: 936 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 992 [20][TOP] >UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus RepID=Q5L492_TRSV Length = 515 Score = 56.6 bits (135), Expect = 1e-06 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 6/177 (3%) Frame = +3 Query: 63 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 236 SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289 Query: 237 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 404 G E+ ++ +S++ + ++PLS P+AP+ +EF + I DSQ P Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349 Query: 405 LCKQINYRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATT 575 + F ++P+ +P + + K T N + + A T Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAAT 406