[UP]
[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 342 bits (877), Expect = 1e-92
Identities = 162/192 (84%), Positives = 174/192 (90%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL
Sbjct: 383 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLL 442
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
+FLHTWYNNMTFLLPDGYAYRRT CG+PSGLYNTQYLDSFGNLFLIIDAM+EF FT+ EI
Sbjct: 443 YFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNLFLIIDAMIEFEFTDDEI 502
Query: 362 ERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 541
+F LL+LG DNTGMT + I R+ FITFLE YAL RYNMVL TK +LT+LRSKI +LG
Sbjct: 503 SKFQLLILGGDNTGMTNLAIDRIDKFITFLETYALARYNMVLPKTKCILTSLRSKIVTLG 562
Query: 542 YQCNYGSPKRDI 577
Y+CNYGSPKRDI
Sbjct: 563 YECNYGSPKRDI 574
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 290 bits (743), Expect = 4e-77
Identities = 133/192 (69%), Positives = 158/192 (82%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP YPDL EH LY RM+NLL
Sbjct: 372 FTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLL 431
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
HFLHTWYNNM F+ DG+AY R+ G+PSGL NTQYLDSF NLFLIID + EFGFT +EI
Sbjct: 432 HFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCNLFLIIDGLFEFGFTQAEI 491
Query: 362 ERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 541
+ ++GDDN+G T + I R+ FI F E YAL+RYNMVLS TKSV+TTLRS+IE+L
Sbjct: 492 LSIVFFIMGDDNSGFTMMDIERLTQFIEFFESYALKRYNMVLSKTKSVITTLRSRIETLS 551
Query: 542 YQCNYGSPKRDI 577
YQCN G+PKR +
Sbjct: 552 YQCNGGNPKRPL 563
[3][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 271 bits (694), Expect = 2e-71
Identities = 119/192 (61%), Positives = 155/192 (80%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YPDL K++ RMDN+L
Sbjct: 367 FTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLTPDKMFQRMDNIL 426
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
FLHTWYNN+ F+ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI
Sbjct: 427 FFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEI 486
Query: 362 ERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 541
+ LLV+GDDN+ T I ++ +F++F E YAL R+ MVLS TKSV+T +R KIE+L
Sbjct: 487 YQIFLLVMGDDNSAFTLWSIAKLEEFLSFFESYALRRFGMVLSKTKSVITVIRGKIETLS 546
Query: 542 YQCNYGSPKRDI 577
YQCNYG+PKR +
Sbjct: 547 YQCNYGAPKRPL 558
[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 258 bits (660), Expect = 2e-67
Identities = 118/192 (61%), Positives = 146/192 (76%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y YPDL ++ RM NLL
Sbjct: 368 FTIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLTPDMMFTRMTNLL 427
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
HFLHTWYNNM ++ DG+AY R CG+PSGL+NTQYLDSFGNL+LIID MLEFG + EI
Sbjct: 428 HFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYLIIDGMLEFGISIDEI 487
Query: 362 ERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 541
+LL++GDDN+G T + R+ F+ F E YAL RYNMVLS +KSV+T R++IE+L
Sbjct: 488 TSVLLLIMGDDNSGFTHWELLRLTHFLDFFENYALVRYNMVLSKSKSVITRFRNRIETLS 547
Query: 542 YQCNYGSPKRDI 577
Y N+G P R +
Sbjct: 548 YSANFGMPTRPL 559
[5][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 242 bits (617), Expect = 2e-62
Identities = 106/192 (55%), Positives = 146/192 (76%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F++DWS +DQRLP VI +++T+++ L+V+NHGY PTYEYP+YPDL + + R+ NL+
Sbjct: 364 FTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLI 423
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
FL TWY NM F+ DG++Y R G+PSG+ NTQ+LDSFGNLFL+ID ++EFG T++EI
Sbjct: 424 TFLATWYFNMVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFLLIDGLIEFGSTDAEI 483
Query: 362 ERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 541
+ +L ++GDDN+ TT I + F++F E YAL RY MVLS TKS++TTLR KIE+L
Sbjct: 484 DDILLFIMGDDNSAFTTWSITHLEQFVSFFETYALSRYGMVLSKTKSIITTLRHKIETLS 543
Query: 542 YQCNYGSPKRDI 577
YQCN+G P+R I
Sbjct: 544 YQCNFGHPRRPI 555
[6][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 212 bits (540), Expect = 1e-53
Identities = 99/191 (51%), Positives = 141/191 (73%)
Frame = +2
Query: 5 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 184
++DWS YDQRLP I ++ +L SL++I+HGY PT EY ++ ++ R NL++
Sbjct: 396 TIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMNISDMFTRFFNLIN 454
Query: 185 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 364
F TWY NM FL DG+A+RR G+PSG+ TQ+LDSFGNL+LIID++LEFG T +I+
Sbjct: 455 FTATWYFNMVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLYLIIDSLLEFGCTYDDIK 514
Query: 365 RFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGY 544
+L ++GDDN+ T I +++DFI+F+E+Y L+R+NM LS TKSV+TTLRSKIE+L Y
Sbjct: 515 SLMLFIMGDDNSIFTNWTIDKLHDFISFMERYCLKRWNMHLSKTKSVITTLRSKIETLSY 574
Query: 545 QCNYGSPKRDI 577
+CN+G P+RD+
Sbjct: 575 RCNFGKPRRDV 585
[7][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 201 bits (511), Expect = 3e-50
Identities = 86/136 (63%), Positives = 112/136 (82%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F++DWS +DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L
Sbjct: 367 FTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNIL 426
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
FLHTWYNN+ ++ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI
Sbjct: 427 TFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEI 486
Query: 362 ERFILLVLGDDNTGMT 409
+ LLV+GDDN+ T
Sbjct: 487 YQIFLLVMGDDNSAFT 502
[8][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 201 bits (511), Expect = 3e-50
Identities = 86/136 (63%), Positives = 112/136 (82%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F++DWS +DQRLPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L
Sbjct: 50 FTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNIL 109
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
FLHTWYNN+ ++ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI
Sbjct: 110 TFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEI 169
Query: 362 ERFILLVLGDDNTGMT 409
+ LLV+GDDN+ T
Sbjct: 170 YQIFLLVMGDDNSAFT 185
[9][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 167 bits (422), Expect = 7e-40
Identities = 81/211 (38%), Positives = 129/211 (61%), Gaps = 21/211 (9%)
Frame = +2
Query: 8 LDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PD 139
+DWS +DQ +P + D++Y D++ +LI+I+ GY + Y + +
Sbjct: 334 IDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSFAAQARKLGVHGNSN 393
Query: 140 LDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFG 304
L+E ++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF
Sbjct: 394 LNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFV 453
Query: 305 NLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMV 484
NL ++ID++ EFGF S+I+ ++L++GDDN + +++ F FL YA +R+NM
Sbjct: 454 NLVVLIDSLFEFGFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMK 513
Query: 485 LSTTKSVLTTLRSKIESLGYQCNYGSPKRDI 577
++ KS+ TTLR KIE LGY NYG P R +
Sbjct: 514 VNVDKSIFTTLRRKIEILGYTNNYGMPVRSL 544
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 166 bits (420), Expect = 1e-39
Identities = 80/211 (37%), Positives = 128/211 (60%), Gaps = 21/211 (9%)
Frame = +2
Query: 8 LDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PD 139
+DWS +DQ +P + D++Y D++ +LI+++ GY + Y + +
Sbjct: 334 IDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGNSN 393
Query: 140 LDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFG 304
L+E ++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF
Sbjct: 394 LNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFV 453
Query: 305 NLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMV 484
NL ++ID++ EFGF S+I ++L++GDDN + +++ F FL YA +R+NM
Sbjct: 454 NLVVLIDSLFEFGFHESDITSALILLMGDDNVVFAPDKLSQLHSFFLFLPGYAKKRWNMT 513
Query: 485 LSTTKSVLTTLRSKIESLGYQCNYGSPKRDI 577
++ KS+ TTLR KIE LGY NYG P R +
Sbjct: 514 VNVDKSIFTTLRRKIEILGYTNNYGMPVRSL 544
[11][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 164 bits (415), Expect = 5e-39
Identities = 79/211 (37%), Positives = 128/211 (60%), Gaps = 21/211 (9%)
Frame = +2
Query: 8 LDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PD 139
+DWS +DQ +P + D++Y D++ +LI+++ GY + Y + +
Sbjct: 334 IDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGDSN 393
Query: 140 LDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFG 304
L+E ++++NLL F++TW+ M ++ PDG+AY RT G+PSG+ TQ +DSF
Sbjct: 394 LNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFV 453
Query: 305 NLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMV 484
NL ++ID++ EFGF S+I+ ++L++GDDN + +++ F FL YA +R+NM
Sbjct: 454 NLVVLIDSLFEFGFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMK 513
Query: 485 LSTTKSVLTTLRSKIESLGYQCNYGSPKRDI 577
++ KS+ TTLR KIE LGY NYG P R +
Sbjct: 514 VNVDKSIFTTLRRKIEILGYTNNYGMPVRSL 544
[12][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 161 bits (407), Expect = 4e-38
Identities = 79/213 (37%), Positives = 126/213 (59%), Gaps = 23/213 (10%)
Frame = +2
Query: 8 LDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP-----------------------TY 118
+DWS +D P I++ ++ +L + I+I+HGY +
Sbjct: 330 IDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSFSAQAQSHGIPMISK 389
Query: 119 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 298
EY T P+ ++ NL+ FL WY +M F+ PDG+AYRRT G+PSG+ TQ++DS
Sbjct: 390 EYQTPPEATVFA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDS 447
Query: 299 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYN 478
F NL +++D ++EFGFT+ EI++ ++ ++GDDN T + ++ +F + KY L+R+
Sbjct: 448 FVNLTILLDGLIEFGFTDEEIKQLLVFIMGDDNVIFTPWTLLKLIEFFDWFAKYTLDRFG 507
Query: 479 MVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDI 577
MV++ +KS +T++R KIE LGY NYG P R I
Sbjct: 508 MVINISKSAVTSIRRKIEVLGYTNNYGFPTRSI 540
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion annosum
P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 140 bits (352), Expect = 9e-32
Identities = 81/220 (36%), Positives = 117/220 (53%), Gaps = 31/220 (14%)
Frame = +2
Query: 11 DWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPTYPDLDEHKLYHRMD---- 172
D+S +DQ P I ++ F+ +I ++ GYQ + Y Y D K Y +D
Sbjct: 358 DYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQYA-YDFEKKYDNLDKSEP 416
Query: 173 -------------------------NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 277
N+L F+ WY M F+ PDGY Y R G+PSG++
Sbjct: 417 KFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIF 476
Query: 278 NTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEK 457
TQ LDSF NLF+ +DA+LEFGF+ +I+ F L + GDDN + R++DF + +
Sbjct: 477 MTQILDSFVNLFIFVDALLEFGFSIDQIKCFRLFIQGDDNLVFYLGDLTRIFDFYEWYPE 536
Query: 458 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDI 577
YAL+R++M++S KS +T LR+KIE LGY G P RD+
Sbjct: 537 YALDRWHMIVSPDKSWITRLRTKIEVLGYTNANGMPHRDV 576
[14][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 93.2 bits (230), Expect = 1e-17
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Frame = +2
Query: 5 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP--TYPDLDEHKLYHRMDNL 178
+LDWS +D+ + +T +R +GY PT+ YP T D DE + R++NL
Sbjct: 324 TLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNGYHPTHRYPISTDVDADEQPVSTRLENL 383
Query: 179 LHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSE 358
+++ + L+PDG R T GI SG TQ LDS N+ +I + GF +
Sbjct: 384 WNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYMQTQILDSLYNMVMIFTMVSRLGF---D 440
Query: 359 IERFILLVLGDDNTGMTTIPICRMYD-FITFLEKYALERYNMVLSTTKSVLTTLRSKIES 535
+++ ++ V GDD+ M + + F+T + YAL + VLS KS + E
Sbjct: 441 LDKVVIKVQGDDSIFMLLCCFILIANWFLTMFKHYALYYFGAVLSDKKSEIRDSLEHAEV 500
Query: 536 LGYQCNYGSPKRD 574
L Y+ G P RD
Sbjct: 501 LKYRNRNGIPYRD 513
[15][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
1 RepID=Q52UL1_9VIRU
Length = 573
Score = 83.6 bits (205), Expect = 1e-14
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 2/193 (1%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F+LDWS +D R+ + D D ++S Y PT YPT + R+ NL
Sbjct: 261 FNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----RLQNLW 314
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
+++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF +
Sbjct: 315 NWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGFRIT-- 372
Query: 362 ERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIES 535
+R+ L VLGDD + IPI + DF+ A R+N L++ K ++ +
Sbjct: 373 DRYFLKVLGDDVIFGILKHIPISKWADFLQDFSTEARRRFNSKLNSKKCGASSGIHGAQV 432
Query: 536 LGYQCNYGSPKRD 574
L Y G PKRD
Sbjct: 433 LSYINWNGYPKRD 445
[16][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 82.4 bits (202), Expect = 2e-14
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT R+ + + GY PT+ PT+P D K R++ L
Sbjct: 312 TLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTHSAPTHPQWDHTKAI-RLERL- 367
Query: 182 HFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNS 355
+L T N +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 368 -WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATLLSALGF--- 423
Query: 356 EIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKI 529
+ + I+ V GDD+ +P + + + L + A+ +N V++ KS +
Sbjct: 424 DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNYFNAVVNVKKSEFGNSLNGR 483
Query: 530 ESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 484 EVLSYRNHNGFPHRD 498
[17][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 81.6 bits (200), Expect = 4e-14
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT R+ + + GY PT+ PT+P D K L
Sbjct: 256 TLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTHSAPTHPQWDHTKAIRHERLWL 313
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
L + +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF +
Sbjct: 314 WTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQSLDSWYNYTMLATLLSALGF---DP 369
Query: 362 ERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIES 535
+ I+ V GDD+ +P + + + L + A+ +N V++ KS + E
Sbjct: 370 KHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNYFNAVVNVKKSEFGNSLNGREV 429
Query: 536 LGYQCNYGSPKRD 574
L Y+ + G P RD
Sbjct: 430 LSYRNHNGFPHRD 442
[18][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 80.9 bits (198), Expect = 7e-14
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT +++ + GY PT+ PT+P + + R++ L
Sbjct: 312 TLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL- 367
Query: 182 HFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNS 355
+L T N +LPDG YRR GIPSGL+ TQ LDS+ N ++ + F
Sbjct: 368 -WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILSALHF--- 423
Query: 356 EIERFILLVLGDDN--TGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKI 529
+ I+ V GDD+ T IP+ + +F+ + + A +N +++ KS + +
Sbjct: 424 DPLHCIIKVQGDDSILRLTTLIPVDQHTNFMDHIVRLADTYFNSIVNVKKSEVRNSLNGC 483
Query: 530 ESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 484 EVLSYRNHNGLPHRD 498
[19][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 80.5 bits (197), Expect = 9e-14
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I Y +RS + + GY PT+ P +P + K R++ L
Sbjct: 312 TLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGYVPTHAAPYHPQWNHEKAL-RLERL- 367
Query: 182 HFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNS 355
+L T N +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 368 -WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILSALGF--- 423
Query: 356 EIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKI 529
+ ++ I+ V GDD+ T IP F+ L A +N +++ KS + +
Sbjct: 424 DPKQCIIKVQGDDSIIRLTVLIPQETHERFMAHLTHLATYYFNAIVNVKKSEVANTLNGR 483
Query: 530 ESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 484 EVLSYRNHNGFPHRD 498
[20][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 80.1 bits (196), Expect = 1e-13
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 3/192 (1%)
Frame = +2
Query: 5 SLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
SLDWS +D R L VI D+Y ++S N+GY PT +YP D H ++ NL
Sbjct: 281 SLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPTVDYP---DSSTHP--QKLHNLW 335
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
++ T L DG ++RT GI SG + TQ++DS N +I+ + GF
Sbjct: 336 DWMLTALKFAPCALADGTIWQRTVRGIASGQFTTQFMDSIYNGLMILTILSRMGFVID-- 393
Query: 362 ERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIES 535
E + +LGDD+ +IP F+ ++ A ++ ++ KS ++ +
Sbjct: 394 ETLPIKLLGDDSVTRLAVSIPASMHESFLIEFQRLADYYFSHTINVKKSKISNTPHNVSV 453
Query: 536 LGYQCNYGSPKR 571
L Y N G P R
Sbjct: 454 LSYANNNGLPVR 465
[21][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
cryptic virus 1 RepID=B7ZGY8_9VIRU
Length = 587
Score = 80.1 bits (196), Expect = 1e-13
Identities = 70/198 (35%), Positives = 98/198 (49%), Gaps = 9/198 (4%)
Frame = +2
Query: 8 LDWSSYD-QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP-TYPDLDEHKLYHRMDNLL 181
LDW +D L V DI + S +HGYQPT +Y T D D R+ NL
Sbjct: 287 LDWQGFDIHALFEVFDDIKNLSW--SFFDCSHGYQPTKDYQGTSCDPD------RLKNLW 338
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN---LFLIIDAMLEFGFTN 352
++ LPDG +RR+ G+PSGL+ TQ+LDS N +F I+DAM F T+
Sbjct: 339 EWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLFITQWLDSVYNCIMIFTILDAM-GFEITS 397
Query: 353 SEIERFILLVLGDDNTGMTTIPICRMYD----FITFLEKYALERYNMVLSTTKSVLTTLR 520
I+ VLGDD+ +T + + YD F + A ++ VLS KS +
Sbjct: 398 D----LIIKVLGDDS--LTRLRLLIPYDQHEAFTIRFKHLAQYYFDAVLSDKKSRIHNTL 451
Query: 521 SKIESLGYQCNYGSPKRD 574
+ ++ LGY+ N G P RD
Sbjct: 452 NGVKCLGYRNNNGLPVRD 469
[22][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 78.2 bits (191), Expect = 4e-13
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT ++S + GY PT+ P +P ++ K + L
Sbjct: 312 TLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKL 364
Query: 182 HFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 349
L W F +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 365 ERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILHALGFN 424
Query: 350 NSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRS 523
S I+ V GDD+ +P R ++ + + A +N +++ KS + +
Sbjct: 425 PSNC---IIKVQGDDSIIRLNVLVPSERHDHLMSRIVELAEYYFNSIVNVKKSEIRNRLN 481
Query: 524 KIESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 482 GCEVLSYRNHNGLPFRD 498
[23][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 78.2 bits (191), Expect = 4e-13
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT ++S + GY PT+ P +P ++ K + L
Sbjct: 312 TLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKL 364
Query: 182 HFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 349
L W F +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 365 ERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILHALGFN 424
Query: 350 NSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRS 523
S I+ V GDD+ +P R ++ + + A +N +++ KS + +
Sbjct: 425 PSNC---IIKVQGDDSIIRLNVLVPSERHDHLMSRIVELAEYYFNSIVNVKKSEIRNRLN 481
Query: 524 KIESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 482 GCEVLSYRNHNGLPFRD 498
[24][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 78.2 bits (191), Expect = 4e-13
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT ++S + GY PT+ P +P ++ K + L
Sbjct: 312 TLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKL 364
Query: 182 HFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 349
L W F +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 365 ERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILHALGFN 424
Query: 350 NSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRS 523
S I+ V GDD+ +P R ++ + + A +N +++ KS + +
Sbjct: 425 PSNC---IIKVQGDDSIIRLNVLVPSERHDHLMSRIVELAEYYFNSIVNVKKSEIRNRLN 481
Query: 524 KIESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 482 GCEVLSYRNHNGLPFRD 498
[25][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 78.2 bits (191), Expect = 4e-13
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 7/197 (3%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT ++S + GY PT+ P +P ++ K + L
Sbjct: 312 TLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKL 364
Query: 182 HFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 349
L W F +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 365 ERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILHALGFN 424
Query: 350 NSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRS 523
S I+ V GDD+ +P R ++ + + A +N +++ KS + +
Sbjct: 425 PSNC---IIKVQGDDSIIRLNVLVPSERHDHLMSRIVELAEYYFNSIVNVEKSEIRNRLN 481
Query: 524 KIESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 482 GCEVLSYRNHNGLPFRD 498
[26][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
mycovirus RepID=Q8B0U3_9VIRU
Length = 598
Score = 76.6 bits (187), Expect = 1e-12
Identities = 60/192 (31%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Frame = +2
Query: 8 LDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 184
+DWSS+D R L +I + ++ R+ +GY PT +Y H ++ L +
Sbjct: 290 VDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH-----LEALWN 343
Query: 185 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 364
++ M LPDG Y+R GIPSGL+ TQ+LDSF N+ +I+ + GF S +
Sbjct: 344 WVCEACFQMPHRLPDGNVYKRLFRGIPSGLFTTQFLDSFYNMIMILTILGRMGFGISTVR 403
Query: 365 RFILLVLGDDN--TGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESL 538
+ V GDD+ + +P +F E YA ++ V K+ +T ++I +L
Sbjct: 404 ---IRVQGDDSLIRLIFHVPANMHAEFKRTFEVYAAYYFDSVARPEKTHITNNPNEINAL 460
Query: 539 GYQCNYGSPKRD 574
GY G P RD
Sbjct: 461 GYDYPNGYPHRD 472
[27][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
RepID=Q5XM56_9VIRU
Length = 573
Score = 76.6 bits (187), Expect = 1e-12
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
F+LDWS +D R+ + D D ++S Y PT PT + R+ NL
Sbjct: 261 FNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----RLQNLW 314
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
+++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + GF +
Sbjct: 315 NWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGFRIT-- 372
Query: 362 ERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIES 535
+R+ L VLGD + IPI + DF+ A R+N L++ K ++ +
Sbjct: 373 DRYFLKVLGDVVIFGILKHIPISKSADFLQDFSTEARRRFNSKLNSKKCGASSGIHGAQV 432
Query: 536 LGYQCNYGSPKRD 574
L Y G PKRD
Sbjct: 433 LSYINWNGYPKRD 445
[28][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 76.6 bits (187), Expect = 1e-12
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 7/197 (3%)
Frame = +2
Query: 5 SLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
+LDWS +D+R ++ I YT ++S + GY PT+ P +P ++ K + L
Sbjct: 312 TLDWSRFDKRAYFPLLRKIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKL 364
Query: 182 HFLHTWYNNMTF----LLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFT 349
L W F +LPDG YRR GIPSGL+ TQ DS+ N ++ + GF
Sbjct: 365 ERLWLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLFDSWYNYTMLATILHALGFN 424
Query: 350 NSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRS 523
S I+ V GDD+ +P R ++ + + A +N +++ KS + +
Sbjct: 425 PSNC---IIKVQGDDSIIRLNVLVPSERHDHLMSRIVELAEYYFNSIVNVKKSEIRNRLN 481
Query: 524 KIESLGYQCNYGSPKRD 574
E L Y+ + G P RD
Sbjct: 482 GCEVLSYRNHNGLPFRD 498
[29][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 76.6 bits (187), Expect = 1e-12
Identities = 51/191 (26%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Frame = +2
Query: 5 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 184
+LDWS +D+ + + +R + GY PT YP PD + R++NL +
Sbjct: 285 TLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPTISYPNAPDTNP----DRLENLWN 340
Query: 185 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 364
++ + +LPDG + GI SG + TQ LDS N +I + GF +++
Sbjct: 341 WMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQTQILDSIYNCVMIYTILSRMGF---DLD 397
Query: 365 RFILLVLGDDNTGMTTIPICRMY-DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 541
+F + V GDD+ ++ + F+ YA E + L+ KS + E L
Sbjct: 398 KFCIKVQGDDSLMISPYNYTLLEPSFLKTFGDYAKEYFGSTLNLKKSEILPSLDGAEVLK 457
Query: 542 YQCNYGSPKRD 574
Y+ + P+R+
Sbjct: 458 YRNHGTMPQRE 468
[30][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 75.5 bits (184), Expect = 3e-12
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Frame = +2
Query: 5 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 184
+LDW +D++ I D + D + + + ++GY PT +YP + R+ L
Sbjct: 314 TLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPDTKSTWTQERSTRLKRLFD 372
Query: 185 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 364
+ + + +LP+G+ Y R GIPSGL+ TQ +DS+ N ++ + GF +
Sbjct: 373 WTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDSWYNYTMLATILSAMGF---DPR 429
Query: 365 RFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESL 538
I+ V GDD+ + IP F+T +++ A + V+S KS + + E L
Sbjct: 430 SCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQELADYYFQSVVSVNKSEVRNELNGCEVL 489
Query: 539 GYQCNYGSPKRD 574
Y+ +G P RD
Sbjct: 490 SYRHRHGLPYRD 501
[31][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
insulare T-type partitivirus RepID=C1KDH6_9VIRU
Length = 585
Score = 75.1 bits (183), Expect = 4e-12
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 8/199 (4%)
Frame = +2
Query: 5 SLDWSSYDQR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 166
++DWS +D R + R I D + Y DF Y PT TYPD + R
Sbjct: 287 TVDWSGFDLRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDPI--R 333
Query: 167 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 346
M+ L ++ M F+LPD Y R IPSGL+ TQ+LDS NL +I + GF
Sbjct: 334 MERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILSAMGF 393
Query: 347 TNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 520
+I ++LV GDD+ +P + F E+ A ++ + K+ +T
Sbjct: 394 ---DITNLMILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDHIARPEKTHVTNSP 450
Query: 521 SKIESLGYQCNYGSPKRDI 577
+++E LGY N G P RD+
Sbjct: 451 NEVEVLGYTNNNGYPSRDM 469
[32][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 73.9 bits (180), Expect = 8e-12
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 2/192 (1%)
Frame = +2
Query: 5 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 184
+LDW +D++ I D + D + + + ++GY PT +YP R+ L
Sbjct: 314 TLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPDTKSTWTQGRSTRIKRLFD 372
Query: 185 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 364
+ + + +LP+G+ Y R GIPSGL+ TQ +DS+ N ++ + GF +
Sbjct: 373 WTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDSWYNYTMLATILSAMGF---DPR 429
Query: 365 RFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESL 538
I+ V GDD+ + IP F+T +++ A + V+S KS + + E L
Sbjct: 430 SCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQELADYYFQSVVSVNKSEVRNELNGCEVL 489
Query: 539 GYQCNYGSPKRD 574
Y+ +G P RD
Sbjct: 490 SYRHRHGLPYRD 501
[33][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-2 RepID=Q6BE42_9VIRU
Length = 538
Score = 72.0 bits (175), Expect = 3e-11
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Frame = +2
Query: 2 FSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------HKLY 160
F+LDWS +D R +Y+T + + ++ + Y PT P LDE H Y
Sbjct: 217 FNLDWSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLHPPY 269
Query: 161 -------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLI 319
R+ NL ++ Y NM + G ++R+ G+PSG++ TQ+ DSF N +I
Sbjct: 270 SEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNAVII 329
Query: 320 IDAMLEFGFTNSEIER-FILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLS 490
+ +L G+ E+ ++ ++GDD + +IPI +F+ L AL R+N LS
Sbjct: 330 VTCLLALGY---EVRHDHLIKLMGDDALFGLLESIPIEHWSEFLDALAAEALFRFNAKLS 386
Query: 491 TTKSVLTTLRSKIESLGYQCNYGSPKR 571
TK T L Y G P R
Sbjct: 387 ATKCGYTRTIQGATVLSYTNWNGWPVR 413
[34][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 71.6 bits (174), Expect = 4e-11
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Frame = +2
Query: 5 SLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
SLDWS +D+R L VI D++ +S H Y+PT Y + H+ R++NL
Sbjct: 274 SLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEPTIFYEKGEIPEPHR---RIENLW 327
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
++ + L PDG Y+ T GI SG TQ LDSF N+ +++ + G N E
Sbjct: 328 IWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQTQLLDSFVNMIMLLTVLSANGI-NIEH 386
Query: 362 ERFILLVLGDDNTGMTTIPICRMY--DFITFLEKYALERYNMVLSTTKSVLTTLRSKIES 535
F + V GDD+ +M+ ++ L A +N LS KS ++
Sbjct: 387 PDFWIKVQGDDSLISIVERRFQMFGISYLDTLADLASYYFNAKLSVKKSFISDTPQGQYV 446
Query: 536 LGYQCNYGSPKR 571
LGY +YG P R
Sbjct: 447 LGYFNHYGIPYR 458
[35][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
Length = 367
Score = 67.8 bits (164), Expect = 6e-10
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Frame = +2
Query: 5 SLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPTYEYP---TYPDLDEHKLYHRMD 172
++DWS +D+R +I I+ R +GY PT +YP T+PD ++
Sbjct: 83 TIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPTKDYPFSPTHPD--------KLQ 132
Query: 173 NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 352
L + + + +LP+G+ Y+R GIPSGL+ TQ +DS+ N ++ + + +
Sbjct: 133 ALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQLMDSWYNYVMLCSIL---HYMD 189
Query: 353 SEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSK 526
+ + I+ V GDD+ IP +F+ ++ A + ++S KS L
Sbjct: 190 IDPKTCIIKVQGDDSIIRLAILIPKDEHDNFLATMQTVADHLFGAIISMDKSELRNSIEN 249
Query: 527 IESLGYQCNYGSPKRDI 577
E L Y+ G P RD+
Sbjct: 250 CEVLSYRHFMGLPYRDL 266
[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
isometric virus RepID=B7X9J3_9VIRU
Length = 587
Score = 62.0 bits (149), Expect = 3e-08
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Frame = +2
Query: 5 SLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLL 181
SLDWS +D+R L VI D++ D RS + Y PT YP P DE R++NL
Sbjct: 279 SLDWSQFDKRALHEVIDDVH--DIWRSYFDFSF-YMPTSFYPNAPT-DES----RLENLW 330
Query: 182 HFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEI 361
++ L G + GI SG TQ LDSF N+ +I+ + G +
Sbjct: 331 EWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQTQLLDSFVNMIMILTCLSRAGVNINSK 390
Query: 362 ERFILLVLGDDNTGMTTIPICRMYD-----FITFLEKYALERYNMVLSTTKSVLTTLRSK 526
+ FI T P MY F+ + A+ +N L+ KS + +
Sbjct: 391 DFFIS---SRGRFTYRTFPEM-MYQLHGMKFLDMIANNAMYYFNAKLNVDKSEINWNTNG 446
Query: 527 IESLGYQCNYGSPKR 571
++ LGY +YG+P+R
Sbjct: 447 MKVLGYPNDYGTPRR 461
[37][TOP]
>UniRef100_Q58HI2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Helicobasidium
purpureum partitivirus RepID=Q58HI2_9VIRU
Length = 162
Score = 60.5 bits (145), Expect = 9e-08
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Frame = +2
Query: 125 PTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 298
PT+P D K R++ L +L T N +LPDG YRR GIPSGL+ TQ LDS
Sbjct: 3 PTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDS 59
Query: 299 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALER 472
+ N ++ + GF + + I+ V GDD+ +P + + + L + A+
Sbjct: 60 WYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNY 116
Query: 473 YNMVLSTTKSVLTTLRSKIESLGYQ-CNYGSPKRD 574
+N V++ KS + E L Y+ + GSP RD
Sbjct: 117 FNAVVNVKKSEFGNSLNGREVLSYRNLHMGSPSRD 151