BB910473 ( RCE09427 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  330 bits (847), Expect = 4e-89
 Identities = 157/192 (81%), Positives = 171/192 (89%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+PSGLYN
Sbjct: 416 GYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYN 475

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
           TQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG DNTGMT + I R+  FITFLE Y
Sbjct: 476 TQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILGGDNTGMTNLAIDRIDKFITFLETY 535

Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
           AL RYNMVL  TK +LT+LRSKI +LGY+CNYGSPKRDI KLVAQLC+PENGLK HTM+A
Sbjct: 536 ALARYNMVLPKTKCILTSLRSKIVTLGYECNYGSPKRDIHKLVAQLCFPENGLKAHTMSA 595

Query: 542 RAIGIAYASAGQ 577
           RA GIAYASAGQ
Sbjct: 596 RATGIAYASAGQ 607

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  275 bits (702), Expect = 2e-72
 Identities = 129/190 (67%), Positives = 152/190 (80%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GYQPTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+  DG+AY R+  G+PSGL N
Sbjct: 405 GYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLN 464

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
           TQYLDSF NLFLIID + EFGFT +EI   +  ++GDDN+G T + I R+  FI F E Y
Sbjct: 465 TQYLDSFCNLFLIIDGLFEFGFTQAEILSIVFFIMGDDNSGFTMMDIERLTQFIEFFESY 524

Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
           AL+RYNMVLS TKSV+TTLRS+IE+L YQCN G+PKR + KL+AQLCYPE+G K   M+A
Sbjct: 525 ALKRYNMVLSKTKSVITTLRSRIETLSYQCNGGNPKRPLGKLIAQLCYPEHGPKDKYMSA 584

Query: 542 RAIGIAYASA 571
           RAIGIAYA+A
Sbjct: 585 RAIGIAYAAA 594

[3][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  257 bits (656), Expect = 5e-67
 Identities = 116/189 (61%), Positives = 148/189 (78%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GYQPTY+YP+YPDL   K++ RMDN+L FLHTWYNN+ F+  DG+AY RTC G+PSGL N
Sbjct: 400 GYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLN 459

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
           TQYLDSF NLFLI D ++EFG +++EI +  LLV+GDDN+  T   I ++ +F++F E Y
Sbjct: 460 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFTLWSIAKLEEFLSFFESY 519

Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
           AL R+ MVLS TKSV+T +R KIE+L YQCNYG+PKR + KLVAQLCYPE G +    +A
Sbjct: 520 ALRRFGMVLSKTKSVITVIRGKIETLSYQCNYGAPKRPLAKLVAQLCYPERGPRAKYTSA 579

Query: 542 RAIGIAYAS 568
           RAIG+AYA+
Sbjct: 580 RAIGMAYAA 588

[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  245 bits (625), Expect = 2e-63
 Identities = 115/191 (60%), Positives = 144/191 (75%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GYQPT +Y  YPDL    ++ RM NLLHFLHTWYNNM ++  DG+AY R  CG+PSGL+N
Sbjct: 401 GYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFN 460

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
           TQYLDSFGNL+LIID MLEFG +  EI   +LL++GDDN+G T   + R+  F+ F E Y
Sbjct: 461 TQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMGDDNSGFTHWELLRLTHFLDFFENY 520

Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
           AL RYNMVLS +KSV+T  R++IE+L Y  N+G P R + KLVAQLCYPE+G+    M++
Sbjct: 521 ALVRYNMVLSKSKSVITRFRNRIETLSYSANFGMPTRPLGKLVAQLCYPEHGVIDKYMSS 580

Query: 542 RAIGIAYASAG 574
           RAIGIAYA+AG
Sbjct: 581 RAIGIAYAAAG 591

[5][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  243 bits (620), Expect = 8e-63
 Identities = 111/192 (57%), Positives = 146/192 (76%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GY PTYEYP+YPDL  + +  R+ NL+ FL TWY NM F+  DG++Y R   G+PSG+ N
Sbjct: 397 GYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLN 456

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
           TQ+LDSFGNLFL+ID ++EFG T++EI+  +L ++GDDN+  TT  I  +  F++F E Y
Sbjct: 457 TQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMGDDNSAFTTWSITHLEQFVSFFETY 516

Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
           AL RY MVLS TKS++TTLR KIE+L YQCN+G P+R I KLVAQLC+PE G +P  M+A
Sbjct: 517 ALSRYGMVLSKTKSIITTLRHKIETLSYQCNFGHPRRPIGKLVAQLCFPERGPRPKYMSA 576

Query: 542 RAIGIAYASAGQ 577
           RA+G+A+AS GQ
Sbjct: 577 RAVGMAWASCGQ 588

[6][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
            virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  225 bits (574), Expect = 2e-57
 Identities = 107/192 (55%), Positives = 146/192 (76%)
 Frame = +2

Query: 2    GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
            GY PT EY     ++   ++ R  NL++F  TWY NM FL  DG+A+RR   G+PSG+  
Sbjct: 428  GYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLL 486

Query: 182  TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
            TQ+LDSFGNL+LIID++LEFG T  +I+  +L ++GDDN+  T   I +++DFI+F+E+Y
Sbjct: 487  TQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMGDDNSIFTNWTIDKLHDFISFMERY 546

Query: 362  ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
             L+R+NM LS TKSV+TTLRSKIE+L Y+CN+G P+RD+EKL+AQL YPE+GLKP  M++
Sbjct: 547  CLKRWNMHLSKTKSVITTLRSKIETLSYRCNFGKPRRDVEKLIAQLVYPEHGLKPQFMSS 606

Query: 542  RAIGIAYASAGQ 577
            RAIG+AYAS  Q
Sbjct: 607  RAIGLAYASCAQ 618

[7][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  178 bits (451), Expect = 3e-43
 Identities = 85/186 (45%), Positives = 122/186 (65%)
 Frame = +2

Query: 20  EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 199
           EY T P+        ++ NL+ FL  WY +M F+ PDG+AYRRT  G+PSG+  TQ++DS
Sbjct: 390 EYQTPPEATVFA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDS 447

Query: 200 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYN 379
           F NL +++D ++EFGFT+ EI++ ++ ++GDDN   T   + ++ +F  +  KY L+R+ 
Sbjct: 448 FVNLTILLDGLIEFGFTDEEIKQLLVFIMGDDNVIFTPWTLLKLIEFFDWFAKYTLDRFG 507

Query: 380 MVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIA 559
           MV++ +KS +T++R KIE LGY  NYG P R I KLV QL YPE  +    M  RAIG A
Sbjct: 508 MVINISKSAVTSIRRKIEVLGYTNNYGFPTRSISKLVGQLAYPERHVTDADMCMRAIGFA 567

Query: 560 YASAGQ 577
           YAS  Q
Sbjct: 568 YASCAQ 573

[8][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  171 bits (432), Expect = 5e-41
 Identities = 78/170 (45%), Positives = 115/170 (67%)
 Frame = +2

Query: 62  HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241
           ++++NLL F++TW+  M ++ PDG+AYRRT  G+PSG+  TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465

Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421
           GF  S+I+  ++L++GDDN       + +++ F  FL  YA +R+NM ++  KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525

Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571
            KIE LGY  NYG P R + KL+ QL YPE  +    M  RAIG A+ +A
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAWCAA 575

[9][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  168 bits (426), Expect = 2e-40
 Identities = 77/170 (45%), Positives = 114/170 (67%)
 Frame = +2

Query: 62  HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241
           ++++NLL F++TW+  M ++ PDG+AY RT  G+PSG+  TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465

Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421
           GF  S+I+  ++L++GDDN       + +++ F  FL  YA +R+NM ++  KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525

Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571
            KIE LGY  NYG P R + KL+ QL YPE  +    M  RAIG A+ +A
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAWCAA 575

[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  167 bits (423), Expect = 5e-40
 Identities = 78/170 (45%), Positives = 113/170 (66%)
 Frame = +2

Query: 62  HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241
           ++++NLL F++TW+  M ++ PDG+AYRRT  G+PSG+  TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465

Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421
           GF  S+I   ++L++GDDN       + +++ F  FL  YA +R+NM ++  KS+ TTLR
Sbjct: 466 GFHESDITSALILLMGDDNVVFAPDKLSQLHSFFLFLPGYAKKRWNMTVNVDKSIFTTLR 525

Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571
            KIE LGY  NYG P R + KL+ QL YPE       M  RAIG A+ +A
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHGFDSDMCMRAIGFAWCAA 575

[11][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score =  159 bits (403), Expect = 1e-37
 Identities = 81/171 (47%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
 Frame = +2

Query: 74  NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 253
           N+L F+  WY  M F+ PDGY Y R   G+PSG++ TQ LDSF NLF+ +DA+LEFGF+ 
Sbjct: 442 NILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSI 501

Query: 254 SEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIE 433
            +I+ F L + GDDN       + R++DF  +  +YAL+R++M++S  KS +T LR+KIE
Sbjct: 502 DQIKCFRLFIQGDDNLVFYLGDLTRIFDFYEWYPEYALDRWHMIVSPDKSWITRLRTKIE 561

Query: 434 SLGYQCNYGSPKRDIEKLVAQLCYPENGL----KPHTMAARAIGIAYASAG 574
            LGY    G P RD+ KL+A L YPE  +    +   + +RAIGIAYA+AG
Sbjct: 562 VLGYTNANGMPHRDVSKLIATLAYPERTILDKNRYPILMSRAIGIAYANAG 612

[12][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  149 bits (375), Expect = 2e-34
 Identities = 63/103 (61%), Positives = 82/103 (79%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ ++  DG+AY RTC G+PSGL N
Sbjct: 400 GYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 459

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 310
           TQYLDSF NLFLI D ++EFG +++EI +  LLV+GDDN+  T
Sbjct: 460 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 502

[13][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  149 bits (375), Expect = 2e-34
 Identities = 63/103 (61%), Positives = 82/103 (79%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ ++  DG+AY RTC G+PSGL N
Sbjct: 83  GYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 142

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 310
           TQYLDSF NLFLI D ++EFG +++EI +  LLV+GDDN+  T
Sbjct: 143 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 185

[14][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score =  103 bits (258), Expect = 7e-21
 Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 3/194 (1%)
 Frame = +2

Query: 2   GYQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 175
           GY PT+ YP  T  D DE  +  R++NL +++      +  L+PDG   R T  GI SG 
Sbjct: 356 GYHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGY 415

Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-FITFL 352
             TQ LDS  N+ +I   +   GF   ++++ ++ V GDD+  M       + + F+T  
Sbjct: 416 MQTQILDSLYNMVMIFTMVSRLGF---DLDKVVIKVQGDDSIFMLLCCFILIANWFLTMF 472

Query: 353 EKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT 532
           + YAL  +  VLS  KS +       E L Y+   G P RD   L+AQL +PE       
Sbjct: 473 KHYALYYFGAVLSDKKSEIRDSLEHAEVLKYRNRNGIPYRDPIALLAQLRHPERSDTLQA 532

Query: 533 MAARAIGIAYASAG 574
           + ARAIGIAYA+ G
Sbjct: 533 LMARAIGIAYANCG 546

[15][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
           cryptic virus 1 RepID=B7ZGY8_9VIRU
          Length = 587

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
 Frame = +2

Query: 2   GYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 178
           GYQPT +Y  T  D D      R+ NL  ++          LPDG  +RR+  G+PSGL+
Sbjct: 317 GYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLF 370

Query: 179 NTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD---- 337
            TQ+LDS  N   +F I+DAM  F  T+      I+ VLGDD+  +T + +   YD    
Sbjct: 371 ITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS--LTRLRLLIPYDQHEA 423

Query: 338 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 517
           F    +  A   ++ VLS  KS +    + ++ LGY+ N G P RD E L+  L YP+  
Sbjct: 424 FTIRFKHLAQYYFDAVLSDKKSRIHNTLNGVKCLGYRNNNGLPVRDRESLLTALLYPK-A 482

Query: 518 LKP--HTMAARAIGIAYASAG 574
            +P    + AR IGIAYASAG
Sbjct: 483 RRPTFEQLKARCIGIAYASAG 503

[16][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
           1 RepID=Q52UL1_9VIRU
          Length = 573

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
 Frame = +2

Query: 5   YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184
           Y PT  YPT     +     R+ NL +++ T Y +       G  YRR   G+PSG++ T
Sbjct: 294 YCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCT 348

Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEK 358
           Q+ DSF N  +++  +   GF  +  +R+ L VLGDD     +  IPI +  DF+     
Sbjct: 349 QFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDDVIFGILKHIPISKWADFLQDFST 406

Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TM 535
            A  R+N  L++ K   ++     + L Y    G PKRD  +L+AQL +P++    +  +
Sbjct: 407 EARRRFNSKLNSKKCGASSGIHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRL 466

Query: 536 AARAIGIAYASAG 574
            ARAIGI YAS G
Sbjct: 467 MARAIGIYYASCG 479

[17][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
           insulare T-type partitivirus RepID=C1KDH6_9VIRU
          Length = 585

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
 Frame = +2

Query: 29  TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 208
           TYPD     +  RM+ L ++       M F+LPD   Y R    IPSGL+ TQ+LDS  N
Sbjct: 323 TYPDSKTDPI--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYN 380

Query: 209 LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNM 382
           L +I   +   GF   +I   ++LV GDD+       +P  +   F    E+ A   ++ 
Sbjct: 381 LIMIYTILSAMGF---DITNLMILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDH 437

Query: 383 VLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK---PHTMAARAIG 553
           +    K+ +T   +++E LGY  N G P RD+ KLVAQL +P N  K      + A+  G
Sbjct: 438 IARPEKTHVTNSPNEVEVLGYTNNNGYPSRDMTKLVAQLYHPRNVDKTSWKSLLMAKVCG 497

Query: 554 IAYASAGQ 577
            AYAS  Q
Sbjct: 498 FAYASCYQ 505

[18][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
           RepID=Q5XM56_9VIRU
          Length = 573

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +2

Query: 65  RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 244
           R+ NL +++ T Y +       G  YRR   G+PSG++ TQ+ DSF N  +++  +   G
Sbjct: 309 RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALG 368

Query: 245 FTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTL 418
           F  +  +R+ L VLGD      +  IPI +  DF+      A  R+N  L++ K   ++ 
Sbjct: 369 FRIT--DRYFLKVLGDVVIFGILKHIPISKSADFLQDFSTEARRRFNSKLNSKKCGASSG 426

Query: 419 RSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TMAARAIGIAYASAG 574
               + L Y    G PKRD  +L+AQL +P++    +  + ARAIGI YAS G
Sbjct: 427 IHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRLMARAIGIYYASCG 479

[19][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
           mycovirus RepID=Q8B0U3_9VIRU
          Length = 598

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GY PT +Y        H     ++ L +++      M   LPDG  Y+R   GIPSGL+ 
Sbjct: 321 GYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFT 375

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITFLE 355
           TQ+LDSF N+ +I+  +   GF  S +    + V GDD+    +  +P     +F    E
Sbjct: 376 TQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDSLIRLIFHVPANMHAEFKRTFE 432

Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT- 532
            YA   ++ V    K+ +T   ++I +LGY    G P RD  KL+AQL +P +     + 
Sbjct: 433 VYAAYYFDSVARPEKTHITNNPNEINALGYDYPNGYPHRDWRKLLAQLLHPRSTAPRFSL 492

Query: 533 MAARAIGIAYAS 568
           + AR  GI YAS
Sbjct: 493 LKARTCGIQYAS 504

[20][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GY PT  YP  PD +      R++NL +++      +  +LPDG   +    GI SG + 
Sbjct: 317 GYHPTISYPNAPDTNPD----RLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQ 372

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY-DFITFLEK 358
           TQ LDS  N  +I   +   GF   ++++F + V GDD+  ++      +   F+     
Sbjct: 373 TQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQGDDSLMISPYNYTLLEPSFLKTFGD 429

Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 538
           YA E +   L+  KS +       E L Y+ +   P+R+  +L+A L +PE      ++ 
Sbjct: 430 YAKEYFGSTLNLKKSEILPSLDGAEVLKYRNHGTMPQREEIQLLAMLRHPERTASLPSLM 489

Query: 539 ARAIGIAYASAG 574
           AR IG+ YA+ G
Sbjct: 490 ARCIGVTYANCG 501

[21][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 83.6 bits (205), Expect = 1e-14
 Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175
           GY PT+  P +P  +  K   R++ L  +L T  N      +LPDG  YRR   GIPSGL
Sbjct: 343 GYVPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399

Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 349
           + TQ LDS+ N  ++   +   GF   + ++ I+ V GDD+    T  IP      F+  
Sbjct: 400 FITQLLDSWYNYTMLATILSALGF---DPKQCIIKVQGDDSIIRLTVLIPQETHERFMAH 456

Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526
           L   A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + +     P
Sbjct: 457 LTHLATYYFNAIVNVKKSEVANTLNGREVLSYRNHNGFPHRDEINMLAQFYHTKARDTTP 516

Query: 527 HTMAARAIGIAYASAG 574
               A+AIG AYAS G
Sbjct: 517 EITMAQAIGFAYASCG 532

[22][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175
           GY PT+  PT+P  D  K   R++ L  +L T  N      +LPDG  YRR   GIPSGL
Sbjct: 343 GYVPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399

Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITF 349
           + TQ LDS+ N  ++   +   GF   + +  I+ V GDD+       +P  +  + +  
Sbjct: 400 FITQLLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDN 456

Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526
           L + A+  +N V++  KS      +  E L Y+ + G P RD   ++AQ  + +     P
Sbjct: 457 LVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARDPTP 516

Query: 527 HTMAARAIGIAYAS 568
               A+AIG AYAS
Sbjct: 517 EITMAQAIGFAYAS 530

[23][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175
           GY PT+  PT+P   +  +  R++ L  +L T  N      +LPDG  YRR   GIPSGL
Sbjct: 343 GYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399

Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITF 349
           + TQ LDS+ N  ++   +    F   +    I+ V GDD+     T IP+ +  +F+  
Sbjct: 400 FITQLLDSWYNYTMLATILSALHF---DPLHCIIKVQGDDSILRLTTLIPVDQHTNFMDH 456

Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526
           + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + +     P
Sbjct: 457 IVRLADTYFNSIVNVKKSEVRNSLNGCEVLSYRNHNGLPHRDEITMLAQFYHTKARDPTP 516

Query: 527 HTMAARAIGIAYAS 568
               A+AIG AYAS
Sbjct: 517 EITMAQAIGFAYAS 530

[24][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GY PT+  PT+P  D  K        L  L   +     +LPDG  YRR   GIPSGL+ 
Sbjct: 287 GYVPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFI 345

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLE 355
           TQ LDS+ N  ++   +   GF   + +  I+ V GDD+       +P  +  + +  L 
Sbjct: 346 TQSLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLV 402

Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532
           + A+  +N V++  KS      +  E L Y+ + G P RD   ++AQ  + +     P  
Sbjct: 403 QLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARDPTPEI 462

Query: 533 MAARAIGIAYAS 568
             A+AIG AYAS
Sbjct: 463 TMAQAIGFAYAS 474

[25][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-2 RepID=Q6BE42_9VIRU
          Length = 538

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
 Frame = +2

Query: 26  PTYPDLDE------HKLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 166
           PT P LDE      H  Y        R+ NL  ++   Y NM  +   G  ++R+  G+P
Sbjct: 252 PTLPVLDEETGTQLHPPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMP 311

Query: 167 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER-FILLVLGDDNTG--MTTIPICRMYD 337
           SG++ TQ+ DSF N  +I+  +L  G+   E+    ++ ++GDD     + +IPI    +
Sbjct: 312 SGIFCTQFYDSFYNAVIIVTCLLALGY---EVRHDHLIKLMGDDALFGLLESIPIEHWSE 368

Query: 338 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 517
           F+  L   AL R+N  LS TK   T        L Y    G P R  E ++A L +P++ 
Sbjct: 369 FLDALAAEALFRFNAKLSATKCGYTRTIQGATVLSYTNWNGWPVRSAEDVLAHLLHPKS- 427

Query: 518 LKPHT--MAARAIGIAYAS 568
           LK     + AR+IG+ YAS
Sbjct: 428 LKDSAPRLMARSIGLYYAS 446

[26][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
           disease-associated mycovirus RepID=Q65A75_9VIRU
          Length = 621

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GY PT +YP        +   R+  L  +    + +   +LP+G+ Y R   GIPSGL+ 
Sbjct: 345 GYLPTKDYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFI 404

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLE 355
           TQ +DS+ N  ++   +   GF   +    I+ V GDD+    +  IP      F+T ++
Sbjct: 405 TQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQ 461

Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532
           + A   +  V+S  KS +    +  E L Y+  +G P RD   ++AQL + +     P  
Sbjct: 462 ELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSPEI 521

Query: 533 MAARAIGIAYASAG 574
             A++IG AYAS G
Sbjct: 522 TMAQSIGFAYASFG 535

[27][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
           associated partitivirus RepID=Q65A70_9VIRU
          Length = 621

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GY PT +YP            R+  L  +    + +   +LP+G+ Y R   GIPSGL+ 
Sbjct: 345 GYLPTKDYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFI 404

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLE 355
           TQ +DS+ N  ++   +   GF   +    I+ V GDD+    +  IP      F+T ++
Sbjct: 405 TQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQ 461

Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532
           + A   +  V+S  KS +    +  E L Y+  +G P RD   ++AQL + +     P  
Sbjct: 462 ELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSPEI 521

Query: 533 MAARAIGIAYASAG 574
             A++IG AYAS G
Sbjct: 522 TMAQSIGFAYASFG 535

[28][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
           Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
          Length = 367

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
 Frame = +2

Query: 2   GYQPTYEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 172
           GY PT +YP   T+PD        ++  L  +    + +   +LP+G+ Y+R   GIPSG
Sbjct: 114 GYTPTKDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSG 165

Query: 173 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFIT 346
           L+ TQ +DS+ N  ++   +    + + + +  I+ V GDD+       IP     +F+ 
Sbjct: 166 LFITQLMDSWYNYVMLCSIL---HYMDIDPKTCIIKVQGDDSIIRLAILIPKDEHDNFLA 222

Query: 347 FLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLK 523
            ++  A   +  ++S  KS L       E L Y+   G P RD+ K++AQ  + +     
Sbjct: 223 TMQTVADHLFGAIISMDKSELRNSIENCEVLSYRHFMGLPYRDLLKMLAQFYHTKARDPT 282

Query: 524 PHTMAARAIGIAYASAG 574
           P    A+A+G AYA+ G
Sbjct: 283 PEITMAQAVGFAYAACG 299

[29][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 4/195 (2%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
           GY PT +YP   D   H    ++ NL  ++ T        L DG  ++RT  GI SG + 
Sbjct: 314 GYIPTVDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFT 368

Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLE 355
           TQ++DS  N  +I+  +   GF     E   + +LGDD+      +IP      F+   +
Sbjct: 369 TQFMDSIYNGLMILTILSRMGFVID--ETLPIKLLGDDSVTRLAVSIPASMHESFLIEFQ 426

Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKP--H 529
           + A   ++  ++  KS ++     +  L Y  N G P R    L+  L YP++  +P   
Sbjct: 427 RLADYYFSHTINVKKSKISNTPHNVSVLSYANNNGLPVRSRTSLLCALLYPKS-RRPTWE 485

Query: 530 TMAARAIGIAYASAG 574
            + ARAIG+ YAS G
Sbjct: 486 HLKARAIGVYYASCG 500

[30][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
           GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397

Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
           GL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R    +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454

Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
           + + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + +    
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514

Query: 521 KPHTMAARAIGIAYAS 568
            P    A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530

[31][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
           partitivirus S RepID=C7ENF4_9VIRU
          Length = 580

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
 Frame = +2

Query: 5   YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184
           Y+PT  Y      + H+   R++NL  ++     +   L PDG  Y+ T  GI SG   T
Sbjct: 305 YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQT 361

Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY--DFITFLEK 358
           Q LDSF N+ +++  +   G  N E   F + V GDD+         +M+   ++  L  
Sbjct: 362 QLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDSLISIVERRFQMFGISYLDTLAD 420

Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 538
            A   +N  LS  KS ++        LGY  +YG P R  + L++ L +PE   +    A
Sbjct: 421 LASYYFNAKLSVKKSFISDTPQGQYVLGYFNHYGIPYRLDDDLLSHLVFPERPQRLEETA 480

Query: 539 ARAIGIAYASAG 574
           A  +GIA AS G
Sbjct: 481 ASCVGIAMASMG 492

[32][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
           GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397

Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
           GL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R    +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454

Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
           + + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + +    
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514

Query: 521 KPHTMAARAIGIAYAS 568
            P    A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530

[33][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
           GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397

Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
           GL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R    +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454

Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
           + + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + +    
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514

Query: 521 KPHTMAARAIGIAYAS 568
            P    A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530

[34][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
           GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397

Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
           GL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R    +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454

Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
           + + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + +    
Sbjct: 455 SRIVELAEYYFNSIVNVEKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514

Query: 521 KPHTMAARAIGIAYAS 568
            P    A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530

[35][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
 Frame = +2

Query: 2   GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
           GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397

Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
           GL+ TQ  DS+ N  ++   +   GF  S     I+ V GDD+       +P  R    +
Sbjct: 398 GLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454

Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
           + + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + +    
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514

Query: 521 KPHTMAARAIGIAYAS 568
            P    A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530

[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
           isometric virus RepID=B7X9J3_9VIRU
          Length = 587

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
 Frame = +2

Query: 5   YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184
           Y PT  YP  P  DE     R++NL  ++          L  G   +    GI SG   T
Sbjct: 310 YMPTSFYPNAPT-DES----RLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQT 364

Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-----FITF 349
           Q LDSF N+ +I+  +   G   +  + FI            T P   MY      F+  
Sbjct: 365 QLLDSFVNMIMILTCLSRAGVNINSKDFFIS---SRGRFTYRTFPEM-MYQLHGMKFLDM 420

Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 529
           +   A+  +N  L+  KS +    + ++ LGY  +YG+P+R  + L++ L +PE      
Sbjct: 421 IANNAMYYFNAKLNVDKSEINWNTNGMKVLGYPNDYGTPRRTDQDLLSHLFFPERIYSLP 480

Query: 530 TMAARAIGIAYASAG 574
           ++A+  IGIAYAS G
Sbjct: 481 SLASTCIGIAYASCG 495

[37][TOP]
>UniRef100_Q58HI2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Helicobasidium
           purpureum partitivirus RepID=Q58HI2_9VIRU
          Length = 162

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
 Frame = +2

Query: 26  PTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 199
           PT+P  D  K   R++ L  +L T  N      +LPDG  YRR   GIPSGL+ TQ LDS
Sbjct: 3   PTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDS 59

Query: 200 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALER 373
           + N  ++   +   GF   + +  I+ V GDD+       +P  +  + +  L + A+  
Sbjct: 60  WYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNY 116

Query: 374 YNMVLSTTKSVLTTLRSKIESLGYQ-CNYGSPKRDIEKLVAQ 496
           +N V++  KS      +  E L Y+  + GSP RD   ++AQ
Sbjct: 117 FNAVVNVKKSEFGNSLNGREVLSYRNLHMGSPSRDEIMMLAQ 158

[38][TOP]
>UniRef100_Q4G3H2 Putative dsRNA-dependent RNA polymerase n=1 Tax=Penicillium
           stoloniferum virus F RepID=Q4G3H2_9VIRU
          Length = 538

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +2

Query: 86  FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 265
           FL T++     +LPDG  Y++   GIPSG + TQ + S  N +L +  +  +   N+   
Sbjct: 313 FLKTYFKKTKIMLPDGSLYKKFH-GIPSGSFFTQIIGSIVN-YLAVKTLDNYFSWNARRF 370

Query: 266 RFILLVLGDDNTGMTTIPICRM-YDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 442
           R    VLGDD++ +  IP  R   D +   EK A E +   L   K  +   +   + LG
Sbjct: 371 R----VLGDDSSFL--IPFGRSKVDGVEISEK-AWETFGFTLKLKKLRIANKQQDRKFLG 423

Query: 443 YQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASAG 574
           YQCN    +R   + ++ + YPE  ++    +A  +   Y   G
Sbjct: 424 YQCNAFRYERSTTEWLSMVLYPERDVEFLEQSASRVFAFYLLGG 467