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[1][TOP] >UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides virus China/Mar2007 RepID=A8W7G1_9VIRU Length = 723 Score = 330 bits (847), Expect = 4e-89 Identities = 157/192 (81%), Positives = 171/192 (89%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+PSGLYN Sbjct: 416 GYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYN 475 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361 TQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG DNTGMT + I R+ FITFLE Y Sbjct: 476 TQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILGGDNTGMTNLAIDRIDKFITFLETY 535 Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541 AL RYNMVL TK +LT+LRSKI +LGY+CNYGSPKRDI KLVAQLC+PENGLK HTM+A Sbjct: 536 ALARYNMVLPKTKCILTSLRSKIVTLGYECNYGSPKRDIHKLVAQLCFPENGLKAHTMSA 595 Query: 542 RAIGIAYASAGQ 577 RA GIAYASAGQ Sbjct: 596 RATGIAYASAGQ 607 [2][TOP] >UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix partitivirus 1-W8 RepID=Q50LH7_9VIRU Length = 709 Score = 275 bits (702), Expect = 2e-72 Identities = 129/190 (67%), Positives = 152/190 (80%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GYQPTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ G+PSGL N Sbjct: 405 GYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLN 464 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361 TQYLDSF NLFLIID + EFGFT +EI + ++GDDN+G T + I R+ FI F E Y Sbjct: 465 TQYLDSFCNLFLIIDGLFEFGFTQAEILSIVFFIMGDDNSGFTMMDIERLTQFIEFFESY 524 Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541 AL+RYNMVLS TKSV+TTLRS+IE+L YQCN G+PKR + KL+AQLCYPE+G K M+A Sbjct: 525 ALKRYNMVLSKTKSVITTLRSRIETLSYQCNGGNPKRPLGKLIAQLCYPEHGPKDKYMSA 584 Query: 542 RAIGIAYASA 571 RAIGIAYA+A Sbjct: 585 RAIGIAYAAA 594 [3][TOP] >UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1 RepID=Q5GHF1_9VIRU Length = 706 Score = 257 bits (656), Expect = 5e-67 Identities = 116/189 (61%), Positives = 148/189 (78%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GYQPTY+YP+YPDL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC G+PSGL N Sbjct: 400 GYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLN 459 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361 TQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T I ++ +F++F E Y Sbjct: 460 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFTLWSIAKLEEFLSFFESY 519 Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541 AL R+ MVLS TKSV+T +R KIE+L YQCNYG+PKR + KLVAQLCYPE G + +A Sbjct: 520 ALRRFGMVLSKTKSVITVIRGKIETLSYQCNYGAPKRPLAKLVAQLCYPERGPRAKYTSA 579 Query: 542 RAIGIAYAS 568 RAIG+AYA+ Sbjct: 580 RAIGMAYAA 588 [4][TOP] >UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-1 RepID=Q6BE43_9VIRU Length = 706 Score = 245 bits (625), Expect = 2e-63 Identities = 115/191 (60%), Positives = 144/191 (75%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GYQPT +Y YPDL ++ RM NLLHFLHTWYNNM ++ DG+AY R CG+PSGL+N Sbjct: 401 GYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFN 460 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361 TQYLDSFGNL+LIID MLEFG + EI +LL++GDDN+G T + R+ F+ F E Y Sbjct: 461 TQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMGDDNSGFTHWELLRLTHFLDFFENY 520 Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541 AL RYNMVLS +KSV+T R++IE+L Y N+G P R + KLVAQLCYPE+G+ M++ Sbjct: 521 ALVRYNMVLSKSKSVITRFRNRIETLSYSANFGMPTRPLGKLVAQLCYPEHGVIDKYMSS 580 Query: 542 RAIGIAYASAG 574 RAIGIAYA+AG Sbjct: 581 RAIGIAYAAAG 591 [5][TOP] >UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1 RepID=Q9YX75_9VIRU Length = 673 Score = 243 bits (620), Expect = 8e-63 Identities = 111/192 (57%), Positives = 146/192 (76%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PTYEYP+YPDL + + R+ NL+ FL TWY NM F+ DG++Y R G+PSG+ N Sbjct: 397 GYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLN 456 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361 TQ+LDSFGNLFL+ID ++EFG T++EI+ +L ++GDDN+ TT I + F++F E Y Sbjct: 457 TQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMGDDNSAFTTWSITHLEQFVSFFETY 516 Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541 AL RY MVLS TKS++TTLR KIE+L YQCN+G P+R I KLVAQLC+PE G +P M+A Sbjct: 517 ALSRYGMVLSKTKSIITTLRHKIETLSYQCNFGHPRRPIGKLVAQLCFPERGPRPKYMSA 576 Query: 542 RAIGIAYASAGQ 577 RA+G+A+AS GQ Sbjct: 577 RAVGMAWASCGQ 588 [6][TOP] >UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani virus 717 RepID=Q9Q9X2_9VIRU Length = 730 Score = 225 bits (574), Expect = 2e-57 Identities = 107/192 (55%), Positives = 146/192 (76%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PT EY ++ ++ R NL++F TWY NM FL DG+A+RR G+PSG+ Sbjct: 428 GYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLL 486 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361 TQ+LDSFGNL+LIID++LEFG T +I+ +L ++GDDN+ T I +++DFI+F+E+Y Sbjct: 487 TQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMGDDNSIFTNWTIDKLHDFISFMERY 546 Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541 L+R+NM LS TKSV+TTLRSKIE+L Y+CN+G P+RD+EKL+AQL YPE+GLKP M++ Sbjct: 547 CLKRWNMHLSKTKSVITTLRSKIETLSYRCNFGKPRRDVEKLIAQLVYPEHGLKPQFMSS 606 Query: 542 RAIGIAYASAGQ 577 RAIG+AYAS Q Sbjct: 607 RAIGLAYASCAQ 618 [7][TOP] >UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella hypoxylon virus RepID=Q85055_AHV Length = 665 Score = 178 bits (451), Expect = 3e-43 Identities = 85/186 (45%), Positives = 122/186 (65%) Frame = +2 Query: 20 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 199 EY T P+ ++ NL+ FL WY +M F+ PDG+AYRRT G+PSG+ TQ++DS Sbjct: 390 EYQTPPEATVFA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDS 447 Query: 200 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYN 379 F NL +++D ++EFGFT+ EI++ ++ ++GDDN T + ++ +F + KY L+R+ Sbjct: 448 FVNLTILLDGLIEFGFTDEEIKQLLVFIMGDDNVIFTPWTLLKLIEFFDWFAKYTLDRFG 507 Query: 380 MVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIA 559 MV++ +KS +T++R KIE LGY NYG P R I KLV QL YPE + M RAIG A Sbjct: 508 MVINISKSAVTSIRRKIEVLGYTNNYGFPTRSISKLVGQLAYPERHVTDADMCMRAIGFA 567 Query: 560 YASAGQ 577 YAS Q Sbjct: 568 YASCAQ 573 [8][TOP] >UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6EM35_9VIRU Length = 663 Score = 171 bits (432), Expect = 5e-41 Identities = 78/170 (45%), Positives = 115/170 (67%) Frame = +2 Query: 62 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241 ++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465 Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421 GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525 Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571 KIE LGY NYG P R + KL+ QL YPE + M RAIG A+ +A Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAWCAA 575 [9][TOP] >UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6X9T6_9VIRU Length = 663 Score = 168 bits (426), Expect = 2e-40 Identities = 77/170 (45%), Positives = 114/170 (67%) Frame = +2 Query: 62 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241 ++++NLL F++TW+ M ++ PDG+AY RT G+PSG+ TQ +DSF NL ++ID++ EF Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465 Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421 GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525 Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571 KIE LGY NYG P R + KL+ QL YPE + M RAIG A+ +A Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAWCAA 575 [10][TOP] >UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus 1 RepID=Q5DM90_9VIRU Length = 663 Score = 167 bits (423), Expect = 5e-40 Identities = 78/170 (45%), Positives = 113/170 (66%) Frame = +2 Query: 62 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241 ++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465 Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421 GF S+I ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR Sbjct: 466 GFHESDITSALILLMGDDNVVFAPDKLSQLHSFFLFLPGYAKKRWNMTVNVDKSIFTTLR 525 Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571 KIE LGY NYG P R + KL+ QL YPE M RAIG A+ +A Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHGFDSDMCMRAIGFAWCAA 575 [11][TOP] >UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion annosum P-type partitivirus RepID=Q8QY51_9VIRU Length = 734 Score = 159 bits (403), Expect = 1e-37 Identities = 81/171 (47%), Positives = 113/171 (66%), Gaps = 4/171 (2%) Frame = +2 Query: 74 NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 253 N+L F+ WY M F+ PDGY Y R G+PSG++ TQ LDSF NLF+ +DA+LEFGF+ Sbjct: 442 NILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSI 501 Query: 254 SEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIE 433 +I+ F L + GDDN + R++DF + +YAL+R++M++S KS +T LR+KIE Sbjct: 502 DQIKCFRLFIQGDDNLVFYLGDLTRIFDFYEWYPEYALDRWHMIVSPDKSWITRLRTKIE 561 Query: 434 SLGYQCNYGSPKRDIEKLVAQLCYPENGL----KPHTMAARAIGIAYASAG 574 LGY G P RD+ KL+A L YPE + + + +RAIGIAYA+AG Sbjct: 562 VLGYTNANGMPHRDVSKLIATLAYPERTILDKNRYPILMSRAIGIAYANAG 612 [12][TOP] >UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=D0EIN9_9VIRU Length = 502 Score = 149 bits (375), Expect = 2e-34 Identities = 63/103 (61%), Positives = 82/103 (79%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+PSGL N Sbjct: 400 GYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 459 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 310 TQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T Sbjct: 460 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 502 [13][TOP] >UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=B2L075_9VIRU Length = 185 Score = 149 bits (375), Expect = 2e-34 Identities = 63/103 (61%), Positives = 82/103 (79%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+PSGL N Sbjct: 83 GYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 142 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 310 TQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T Sbjct: 143 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 185 [14][TOP] >UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric virus II RepID=Q7TDZ9_9VIRU Length = 610 Score = 103 bits (258), Expect = 7e-21 Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 GYQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 175 GY PT+ YP T D DE + R++NL +++ + L+PDG R T GI SG Sbjct: 356 GYHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGY 415 Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-FITFL 352 TQ LDS N+ +I + GF ++++ ++ V GDD+ M + + F+T Sbjct: 416 MQTQILDSLYNMVMIFTMVSRLGF---DLDKVVIKVQGDDSIFMLLCCFILIANWFLTMF 472 Query: 353 EKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT 532 + YAL + VLS KS + E L Y+ G P RD L+AQL +PE Sbjct: 473 KHYALYYFGAVLSDKKSEIRDSLEHAEVLKYRNRNGIPYRDPIALLAQLRHPERSDTLQA 532 Query: 533 MAARAIGIAYASAG 574 + ARAIGIAYA+ G Sbjct: 533 LMARAIGIAYANCG 546 [15][TOP] >UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum cryptic virus 1 RepID=B7ZGY8_9VIRU Length = 587 Score = 94.0 bits (232), Expect = 8e-18 Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 10/201 (4%) Frame = +2 Query: 2 GYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 178 GYQPT +Y T D D R+ NL ++ LPDG +RR+ G+PSGL+ Sbjct: 317 GYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLF 370 Query: 179 NTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD---- 337 TQ+LDS N +F I+DAM F T+ I+ VLGDD+ +T + + YD Sbjct: 371 ITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS--LTRLRLLIPYDQHEA 423 Query: 338 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 517 F + A ++ VLS KS + + ++ LGY+ N G P RD E L+ L YP+ Sbjct: 424 FTIRFKHLAQYYFDAVLSDKKSRIHNTLNGVKCLGYRNNNGLPVRDRESLLTALLYPK-A 482 Query: 518 LKP--HTMAARAIGIAYASAG 574 +P + AR IGIAYASAG Sbjct: 483 RRPTFEQLKARCIGIAYASAG 503 [16][TOP] >UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus 1 RepID=Q52UL1_9VIRU Length = 573 Score = 92.8 bits (229), Expect = 2e-17 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 3/193 (1%) Frame = +2 Query: 5 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184 Y PT YPT + R+ NL +++ T Y + G YRR G+PSG++ T Sbjct: 294 YCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCT 348 Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEK 358 Q+ DSF N +++ + GF + +R+ L VLGDD + IPI + DF+ Sbjct: 349 QFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDDVIFGILKHIPISKWADFLQDFST 406 Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TM 535 A R+N L++ K ++ + L Y G PKRD +L+AQL +P++ + + Sbjct: 407 EARRRFNSKLNSKKCGASSGIHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRL 466 Query: 536 AARAIGIAYASAG 574 ARAIGI YAS G Sbjct: 467 MARAIGIYYASCG 479 [17][TOP] >UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion insulare T-type partitivirus RepID=C1KDH6_9VIRU Length = 585 Score = 89.4 bits (220), Expect = 2e-16 Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 5/188 (2%) Frame = +2 Query: 29 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 208 TYPD + RM+ L ++ M F+LPD Y R IPSGL+ TQ+LDS N Sbjct: 323 TYPDSKTDPI--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYN 380 Query: 209 LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNM 382 L +I + GF +I ++LV GDD+ +P + F E+ A ++ Sbjct: 381 LIMIYTILSAMGF---DITNLMILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDH 437 Query: 383 VLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK---PHTMAARAIG 553 + K+ +T +++E LGY N G P RD+ KLVAQL +P N K + A+ G Sbjct: 438 IARPEKTHVTNSPNEVEVLGYTNNNGYPSRDMTKLVAQLYHPRNVDKTSWKSLLMAKVCG 497 Query: 554 IAYASAGQ 577 AYAS Q Sbjct: 498 FAYASCYQ 505 [18][TOP] >UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004 RepID=Q5XM56_9VIRU Length = 573 Score = 85.9 bits (211), Expect = 2e-15 Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 3/173 (1%) Frame = +2 Query: 65 RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 244 R+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + G Sbjct: 309 RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALG 368 Query: 245 FTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTL 418 F + +R+ L VLGD + IPI + DF+ A R+N L++ K ++ Sbjct: 369 FRIT--DRYFLKVLGDVVIFGILKHIPISKSADFLQDFSTEARRRFNSKLNSKKCGASSG 426 Query: 419 RSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TMAARAIGIAYASAG 574 + L Y G PKRD +L+AQL +P++ + + ARAIGI YAS G Sbjct: 427 IHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRLMARAIGIYYASCG 479 [19][TOP] >UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA mycovirus RepID=Q8B0U3_9VIRU Length = 598 Score = 85.1 bits (209), Expect = 4e-15 Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 3/192 (1%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PT +Y H ++ L +++ M LPDG Y+R GIPSGL+ Sbjct: 321 GYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFT 375 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITFLE 355 TQ+LDSF N+ +I+ + GF S + + V GDD+ + +P +F E Sbjct: 376 TQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDSLIRLIFHVPANMHAEFKRTFE 432 Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT- 532 YA ++ V K+ +T ++I +LGY G P RD KL+AQL +P + + Sbjct: 433 VYAAYYFDSVARPEKTHITNNPNEINALGYDYPNGYPHRDWRKLLAQLLHPRSTAPRFSL 492 Query: 533 MAARAIGIAYAS 568 + AR GI YAS Sbjct: 493 LKARTCGIQYAS 504 [20][TOP] >UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU Length = 576 Score = 84.3 bits (207), Expect = 6e-15 Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 1/192 (0%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PT YP PD + R++NL +++ + +LPDG + GI SG + Sbjct: 317 GYHPTISYPNAPDTNPD----RLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQ 372 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY-DFITFLEK 358 TQ LDS N +I + GF ++++F + V GDD+ ++ + F+ Sbjct: 373 TQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQGDDSLMISPYNYTLLEPSFLKTFGD 429 Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 538 YA E + L+ KS + E L Y+ + P+R+ +L+A L +PE ++ Sbjct: 430 YAKEYFGSTLNLKKSEILPSLDGAEVLKYRNHGTMPQREEIQLLAMLRHPERTASLPSLM 489 Query: 539 ARAIGIAYASAG 574 AR IG+ YA+ G Sbjct: 490 ARCIGVTYANCG 501 [21][TOP] >UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus RepID=B8YNW9_9VIRU Length = 616 Score = 83.6 bits (205), Expect = 1e-14 Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 5/196 (2%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175 GY PT+ P +P + K R++ L +L T N +LPDG YRR GIPSGL Sbjct: 343 GYVPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399 Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 349 + TQ LDS+ N ++ + GF + ++ I+ V GDD+ T IP F+ Sbjct: 400 FITQLLDSWYNYTMLATILSALGF---DPKQCIIKVQGDDSIIRLTVLIPQETHERFMAH 456 Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526 L A +N +++ KS + + E L Y+ + G P RD ++AQ + + P Sbjct: 457 LTHLATYYFNAIVNVKKSEVANTLNGREVLSYRNHNGFPHRDEINMLAQFYHTKARDTTP 516 Query: 527 HTMAARAIGIAYASAG 574 A+AIG AYAS G Sbjct: 517 EITMAQAIGFAYASCG 532 [22][TOP] >UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=B2CGP3_9VIRU Length = 616 Score = 81.6 bits (200), Expect = 4e-14 Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 5/194 (2%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175 GY PT+ PT+P D K R++ L +L T N +LPDG YRR GIPSGL Sbjct: 343 GYVPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399 Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITF 349 + TQ LDS+ N ++ + GF + + I+ V GDD+ +P + + + Sbjct: 400 FITQLLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDN 456 Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526 L + A+ +N V++ KS + E L Y+ + G P RD ++AQ + + P Sbjct: 457 LVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARDPTP 516 Query: 527 HTMAARAIGIAYAS 568 A+AIG AYAS Sbjct: 517 EITMAQAIGFAYAS 530 [23][TOP] >UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1 RepID=Q64FP0_WCCV1 Length = 616 Score = 80.9 bits (198), Expect = 7e-14 Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 5/194 (2%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175 GY PT+ PT+P + + R++ L +L T N +LPDG YRR GIPSGL Sbjct: 343 GYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399 Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITF 349 + TQ LDS+ N ++ + F + I+ V GDD+ T IP+ + +F+ Sbjct: 400 FITQLLDSWYNYTMLATILSALHF---DPLHCIIKVQGDDSILRLTTLIPVDQHTNFMDH 456 Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526 + + A +N +++ KS + + E L Y+ + G P RD ++AQ + + P Sbjct: 457 IVRLADTYFNSIVNVKKSEVRNSLNGCEVLSYRNHNGLPHRDEITMLAQFYHTKARDPTP 516 Query: 527 HTMAARAIGIAYAS 568 A+AIG AYAS Sbjct: 517 EITMAQAIGFAYAS 530 [24][TOP] >UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=D0EP81_9VIRU Length = 559 Score = 80.9 bits (198), Expect = 7e-14 Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 3/192 (1%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PT+ PT+P D K L L + +LPDG YRR GIPSGL+ Sbjct: 287 GYVPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFI 345 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLE 355 TQ LDS+ N ++ + GF + + I+ V GDD+ +P + + + L Sbjct: 346 TQSLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLV 402 Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532 + A+ +N V++ KS + E L Y+ + G P RD ++AQ + + P Sbjct: 403 QLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARDPTPEI 462 Query: 533 MAARAIGIAYAS 568 A+AIG AYAS Sbjct: 463 TMAQAIGFAYAS 474 [25][TOP] >UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-2 RepID=Q6BE42_9VIRU Length = 538 Score = 80.1 bits (196), Expect = 1e-13 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 18/199 (9%) Frame = +2 Query: 26 PTYPDLDE------HKLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 166 PT P LDE H Y R+ NL ++ Y NM + G ++R+ G+P Sbjct: 252 PTLPVLDEETGTQLHPPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMP 311 Query: 167 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER-FILLVLGDDNTG--MTTIPICRMYD 337 SG++ TQ+ DSF N +I+ +L G+ E+ ++ ++GDD + +IPI + Sbjct: 312 SGIFCTQFYDSFYNAVIIVTCLLALGY---EVRHDHLIKLMGDDALFGLLESIPIEHWSE 368 Query: 338 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 517 F+ L AL R+N LS TK T L Y G P R E ++A L +P++ Sbjct: 369 FLDALAAEALFRFNAKLSATKCGYTRTIQGATVLSYTNWNGWPVRSAEDVLAHLLHPKS- 427 Query: 518 LKPHT--MAARAIGIAYAS 568 LK + AR+IG+ YAS Sbjct: 428 LKDSAPRLMARSIGLYYAS 446 [26][TOP] >UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry disease-associated mycovirus RepID=Q65A75_9VIRU Length = 621 Score = 79.3 bits (194), Expect = 2e-13 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 3/194 (1%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PT +YP + R+ L + + + +LP+G+ Y R GIPSGL+ Sbjct: 345 GYLPTKDYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFI 404 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLE 355 TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T ++ Sbjct: 405 TQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQ 461 Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532 + A + V+S KS + + E L Y+ +G P RD ++AQL + + P Sbjct: 462 ELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSPEI 521 Query: 533 MAARAIGIAYASAG 574 A++IG AYAS G Sbjct: 522 TMAQSIGFAYASFG 535 [27][TOP] >UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot associated partitivirus RepID=Q65A70_9VIRU Length = 621 Score = 77.8 bits (190), Expect = 6e-13 Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PT +YP R+ L + + + +LP+G+ Y R GIPSGL+ Sbjct: 345 GYLPTKDYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFI 404 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLE 355 TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T ++ Sbjct: 405 TQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQ 461 Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532 + A + V+S KS + + E L Y+ +G P RD ++AQL + + P Sbjct: 462 ELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSPEI 521 Query: 533 MAARAIGIAYASAG 574 A++IG AYAS G Sbjct: 522 TMAQSIGFAYASFG 535 [28][TOP] >UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1 Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU Length = 367 Score = 77.4 bits (189), Expect = 7e-13 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 6/197 (3%) Frame = +2 Query: 2 GYQPTYEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 172 GY PT +YP T+PD ++ L + + + +LP+G+ Y+R GIPSG Sbjct: 114 GYTPTKDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSG 165 Query: 173 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFIT 346 L+ TQ +DS+ N ++ + + + + + I+ V GDD+ IP +F+ Sbjct: 166 LFITQLMDSWYNYVMLCSIL---HYMDIDPKTCIIKVQGDDSIIRLAILIPKDEHDNFLA 222 Query: 347 FLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLK 523 ++ A + ++S KS L E L Y+ G P RD+ K++AQ + + Sbjct: 223 TMQTVADHLFGAIISMDKSELRNSIENCEVLSYRHFMGLPYRDLLKMLAQFYHTKARDPT 282 Query: 524 PHTMAARAIGIAYASAG 574 P A+A+G AYA+ G Sbjct: 283 PEITMAQAVGFAYAACG 299 [29][TOP] >UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning virus RepID=C0STM0_9VIRU Length = 580 Score = 77.0 bits (188), Expect = 1e-12 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 4/195 (2%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181 GY PT +YP D H ++ NL ++ T L DG ++RT GI SG + Sbjct: 314 GYIPTVDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFT 368 Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLE 355 TQ++DS N +I+ + GF E + +LGDD+ +IP F+ + Sbjct: 369 TQFMDSIYNGLMILTILSRMGFVID--ETLPIKLLGDDSVTRLAVSIPASMHESFLIEFQ 426 Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKP--H 529 + A ++ ++ KS ++ + L Y N G P R L+ L YP++ +P Sbjct: 427 RLADYYFSHTINVKKSKISNTPHNVSVLSYANNNGLPVRSRTSLLCALLYPKS-RRPTWE 485 Query: 530 TMAARAIGIAYASAG 574 + ARAIG+ YAS G Sbjct: 486 HLKARAIGVYYASCG 500 [30][TOP] >UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=Q4KUU4_9VIRU Length = 616 Score = 76.6 bits (187), Expect = 1e-12 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169 GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397 Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343 GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R + Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454 Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520 + + + A +N +++ KS + + E L Y+ + G P RD ++AQ + + Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514 Query: 521 KPHTMAARAIGIAYAS 568 P A+AIG AYAS Sbjct: 515 TPEITMAQAIGFAYAS 530 [31][TOP] >UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum partitivirus S RepID=C7ENF4_9VIRU Length = 580 Score = 76.6 bits (187), Expect = 1e-12 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 2/192 (1%) Frame = +2 Query: 5 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184 Y+PT Y + H+ R++NL ++ + L PDG Y+ T GI SG T Sbjct: 305 YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQT 361 Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY--DFITFLEK 358 Q LDSF N+ +++ + G N E F + V GDD+ +M+ ++ L Sbjct: 362 QLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDSLISIVERRFQMFGISYLDTLAD 420 Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 538 A +N LS KS ++ LGY +YG P R + L++ L +PE + A Sbjct: 421 LASYYFNAKLSVKKSFISDTPQGQYVLGYFNHYGIPYRLDDDLLSHLVFPERPQRLEETA 480 Query: 539 ARAIGIAYASAG 574 A +GIA AS G Sbjct: 481 ASCVGIAMASMG 492 [32][TOP] >UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R744_9VIRU Length = 616 Score = 76.6 bits (187), Expect = 1e-12 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169 GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397 Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343 GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R + Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454 Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520 + + + A +N +++ KS + + E L Y+ + G P RD ++AQ + + Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514 Query: 521 KPHTMAARAIGIAYAS 568 P A+AIG AYAS Sbjct: 515 TPEITMAQAIGFAYAS 530 [33][TOP] >UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R742_9VIRU Length = 616 Score = 76.6 bits (187), Expect = 1e-12 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169 GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397 Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343 GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R + Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454 Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520 + + + A +N +++ KS + + E L Y+ + G P RD ++AQ + + Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514 Query: 521 KPHTMAARAIGIAYAS 568 P A+AIG AYAS Sbjct: 515 TPEITMAQAIGFAYAS 530 [34][TOP] >UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R739_9VIRU Length = 616 Score = 76.6 bits (187), Expect = 1e-12 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169 GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397 Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343 GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R + Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454 Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520 + + + A +N +++ KS + + E L Y+ + G P RD ++AQ + + Sbjct: 455 SRIVELAEYYFNSIVNVEKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514 Query: 521 KPHTMAARAIGIAYAS 568 P A+AIG AYAS Sbjct: 515 TPEITMAQAIGFAYAS 530 [35][TOP] >UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=B2M1T3_9VIRU Length = 616 Score = 75.1 bits (183), Expect = 4e-12 Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 7/196 (3%) Frame = +2 Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169 GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397 Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343 GL+ TQ DS+ N ++ + GF S I+ V GDD+ +P R + Sbjct: 398 GLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454 Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520 + + + A +N +++ KS + + E L Y+ + G P RD ++AQ + + Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514 Query: 521 KPHTMAARAIGIAYAS 568 P A+AIG AYAS Sbjct: 515 TPEITMAQAIGFAYAS 530 [36][TOP] >UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes isometric virus RepID=B7X9J3_9VIRU Length = 587 Score = 69.7 bits (169), Expect = 2e-10 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 5/195 (2%) Frame = +2 Query: 5 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184 Y PT YP P DE R++NL ++ L G + GI SG T Sbjct: 310 YMPTSFYPNAPT-DES----RLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQT 364 Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-----FITF 349 Q LDSF N+ +I+ + G + + FI T P MY F+ Sbjct: 365 QLLDSFVNMIMILTCLSRAGVNINSKDFFIS---SRGRFTYRTFPEM-MYQLHGMKFLDM 420 Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 529 + A+ +N L+ KS + + ++ LGY +YG+P+R + L++ L +PE Sbjct: 421 IANNAMYYFNAKLNVDKSEINWNTNGMKVLGYPNDYGTPRRTDQDLLSHLFFPERIYSLP 480 Query: 530 TMAARAIGIAYASAG 574 ++A+ IGIAYAS G Sbjct: 481 SLASTCIGIAYASCG 495 [37][TOP] >UniRef100_Q58HI2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Helicobasidium purpureum partitivirus RepID=Q58HI2_9VIRU Length = 162 Score = 62.4 bits (150), Expect = 2e-08 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 5/162 (3%) Frame = +2 Query: 26 PTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 199 PT+P D K R++ L +L T N +LPDG YRR GIPSGL+ TQ LDS Sbjct: 3 PTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDS 59 Query: 200 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALER 373 + N ++ + GF + + I+ V GDD+ +P + + + L + A+ Sbjct: 60 WYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNY 116 Query: 374 YNMVLSTTKSVLTTLRSKIESLGYQ-CNYGSPKRDIEKLVAQ 496 +N V++ KS + E L Y+ + GSP RD ++AQ Sbjct: 117 FNAVVNVKKSEFGNSLNGREVLSYRNLHMGSPSRDEIMMLAQ 158 [38][TOP] >UniRef100_Q4G3H2 Putative dsRNA-dependent RNA polymerase n=1 Tax=Penicillium stoloniferum virus F RepID=Q4G3H2_9VIRU Length = 538 Score = 55.5 bits (132), Expect = 3e-06 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +2 Query: 86 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 265 FL T++ +LPDG Y++ GIPSG + TQ + S N +L + + + N+ Sbjct: 313 FLKTYFKKTKIMLPDGSLYKKFH-GIPSGSFFTQIIGSIVN-YLAVKTLDNYFSWNARRF 370 Query: 266 RFILLVLGDDNTGMTTIPICRM-YDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 442 R VLGDD++ + IP R D + EK A E + L K + + + LG Sbjct: 371 R----VLGDDSSFL--IPFGRSKVDGVEISEK-AWETFGFTLKLKKLRIANKQQDRKFLG 423 Query: 443 YQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASAG 574 YQCN +R + ++ + YPE ++ +A + Y G Sbjct: 424 YQCNAFRYERSTTEWLSMVLYPERDVEFLEQSASRVFAFYLLGG 467