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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 330 bits (847), Expect = 4e-89
Identities = 157/192 (81%), Positives = 171/192 (89%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+PSGLYN
Sbjct: 416 GYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGVPSGLYN 475
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
TQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG DNTGMT + I R+ FITFLE Y
Sbjct: 476 TQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILGGDNTGMTNLAIDRIDKFITFLETY 535
Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
AL RYNMVL TK +LT+LRSKI +LGY+CNYGSPKRDI KLVAQLC+PENGLK HTM+A
Sbjct: 536 ALARYNMVLPKTKCILTSLRSKIVTLGYECNYGSPKRDIHKLVAQLCFPENGLKAHTMSA 595
Query: 542 RAIGIAYASAGQ 577
RA GIAYASAGQ
Sbjct: 596 RATGIAYASAGQ 607
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 275 bits (702), Expect = 2e-72
Identities = 129/190 (67%), Positives = 152/190 (80%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GYQPTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ G+PSGL N
Sbjct: 405 GYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLN 464
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
TQYLDSF NLFLIID + EFGFT +EI + ++GDDN+G T + I R+ FI F E Y
Sbjct: 465 TQYLDSFCNLFLIIDGLFEFGFTQAEILSIVFFIMGDDNSGFTMMDIERLTQFIEFFESY 524
Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
AL+RYNMVLS TKSV+TTLRS+IE+L YQCN G+PKR + KL+AQLCYPE+G K M+A
Sbjct: 525 ALKRYNMVLSKTKSVITTLRSRIETLSYQCNGGNPKRPLGKLIAQLCYPEHGPKDKYMSA 584
Query: 542 RAIGIAYASA 571
RAIGIAYA+A
Sbjct: 585 RAIGIAYAAA 594
[3][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 257 bits (656), Expect = 5e-67
Identities = 116/189 (61%), Positives = 148/189 (78%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GYQPTY+YP+YPDL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC G+PSGL N
Sbjct: 400 GYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLN 459
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
TQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T I ++ +F++F E Y
Sbjct: 460 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFTLWSIAKLEEFLSFFESY 519
Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
AL R+ MVLS TKSV+T +R KIE+L YQCNYG+PKR + KLVAQLCYPE G + +A
Sbjct: 520 ALRRFGMVLSKTKSVITVIRGKIETLSYQCNYGAPKRPLAKLVAQLCYPERGPRAKYTSA 579
Query: 542 RAIGIAYAS 568
RAIG+AYA+
Sbjct: 580 RAIGMAYAA 588
[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 245 bits (625), Expect = 2e-63
Identities = 115/191 (60%), Positives = 144/191 (75%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GYQPT +Y YPDL ++ RM NLLHFLHTWYNNM ++ DG+AY R CG+PSGL+N
Sbjct: 401 GYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGVPSGLFN 460
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
TQYLDSFGNL+LIID MLEFG + EI +LL++GDDN+G T + R+ F+ F E Y
Sbjct: 461 TQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMGDDNSGFTHWELLRLTHFLDFFENY 520
Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
AL RYNMVLS +KSV+T R++IE+L Y N+G P R + KLVAQLCYPE+G+ M++
Sbjct: 521 ALVRYNMVLSKSKSVITRFRNRIETLSYSANFGMPTRPLGKLVAQLCYPEHGVIDKYMSS 580
Query: 542 RAIGIAYASAG 574
RAIGIAYA+AG
Sbjct: 581 RAIGIAYAAAG 591
[5][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 243 bits (620), Expect = 8e-63
Identities = 111/192 (57%), Positives = 146/192 (76%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PTYEYP+YPDL + + R+ NL+ FL TWY NM F+ DG++Y R G+PSG+ N
Sbjct: 397 GYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLN 456
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
TQ+LDSFGNLFL+ID ++EFG T++EI+ +L ++GDDN+ TT I + F++F E Y
Sbjct: 457 TQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMGDDNSAFTTWSITHLEQFVSFFETY 516
Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
AL RY MVLS TKS++TTLR KIE+L YQCN+G P+R I KLVAQLC+PE G +P M+A
Sbjct: 517 ALSRYGMVLSKTKSIITTLRHKIETLSYQCNFGHPRRPIGKLVAQLCFPERGPRPKYMSA 576
Query: 542 RAIGIAYASAGQ 577
RA+G+A+AS GQ
Sbjct: 577 RAVGMAWASCGQ 588
[6][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 225 bits (574), Expect = 2e-57
Identities = 107/192 (55%), Positives = 146/192 (76%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PT EY ++ ++ R NL++F TWY NM FL DG+A+RR G+PSG+
Sbjct: 428 GYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGMLL 486
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKY 361
TQ+LDSFGNL+LIID++LEFG T +I+ +L ++GDDN+ T I +++DFI+F+E+Y
Sbjct: 487 TQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMGDDNSIFTNWTIDKLHDFISFMERY 546
Query: 362 ALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAA 541
L+R+NM LS TKSV+TTLRSKIE+L Y+CN+G P+RD+EKL+AQL YPE+GLKP M++
Sbjct: 547 CLKRWNMHLSKTKSVITTLRSKIETLSYRCNFGKPRRDVEKLIAQLVYPEHGLKPQFMSS 606
Query: 542 RAIGIAYASAGQ 577
RAIG+AYAS Q
Sbjct: 607 RAIGLAYASCAQ 618
[7][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 178 bits (451), Expect = 3e-43
Identities = 85/186 (45%), Positives = 122/186 (65%)
Frame = +2
Query: 20 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 199
EY T P+ ++ NL+ FL WY +M F+ PDG+AYRRT G+PSG+ TQ++DS
Sbjct: 390 EYQTPPEATVFA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDS 447
Query: 200 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYN 379
F NL +++D ++EFGFT+ EI++ ++ ++GDDN T + ++ +F + KY L+R+
Sbjct: 448 FVNLTILLDGLIEFGFTDEEIKQLLVFIMGDDNVIFTPWTLLKLIEFFDWFAKYTLDRFG 507
Query: 380 MVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIA 559
MV++ +KS +T++R KIE LGY NYG P R I KLV QL YPE + M RAIG A
Sbjct: 508 MVINISKSAVTSIRRKIEVLGYTNNYGFPTRSISKLVGQLAYPERHVTDADMCMRAIGFA 567
Query: 560 YASAGQ 577
YAS Q
Sbjct: 568 YASCAQ 573
[8][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 171 bits (432), Expect = 5e-41
Identities = 78/170 (45%), Positives = 115/170 (67%)
Frame = +2
Query: 62 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241
++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465
Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421
GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525
Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571
KIE LGY NYG P R + KL+ QL YPE + M RAIG A+ +A
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAWCAA 575
[9][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 168 bits (426), Expect = 2e-40
Identities = 77/170 (45%), Positives = 114/170 (67%)
Frame = +2
Query: 62 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241
++++NLL F++TW+ M ++ PDG+AY RT G+PSG+ TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465
Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421
GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525
Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571
KIE LGY NYG P R + KL+ QL YPE + M RAIG A+ +A
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAWCAA 575
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 167 bits (423), Expect = 5e-40
Identities = 78/170 (45%), Positives = 113/170 (66%)
Frame = +2
Query: 62 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 241
++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465
Query: 242 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 421
GF S+I ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR
Sbjct: 466 GFHESDITSALILLMGDDNVVFAPDKLSQLHSFFLFLPGYAKKRWNMTVNVDKSIFTTLR 525
Query: 422 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASA 571
KIE LGY NYG P R + KL+ QL YPE M RAIG A+ +A
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHGFDSDMCMRAIGFAWCAA 575
[11][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 159 bits (403), Expect = 1e-37
Identities = 81/171 (47%), Positives = 113/171 (66%), Gaps = 4/171 (2%)
Frame = +2
Query: 74 NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 253
N+L F+ WY M F+ PDGY Y R G+PSG++ TQ LDSF NLF+ +DA+LEFGF+
Sbjct: 442 NILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSI 501
Query: 254 SEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIE 433
+I+ F L + GDDN + R++DF + +YAL+R++M++S KS +T LR+KIE
Sbjct: 502 DQIKCFRLFIQGDDNLVFYLGDLTRIFDFYEWYPEYALDRWHMIVSPDKSWITRLRTKIE 561
Query: 434 SLGYQCNYGSPKRDIEKLVAQLCYPENGL----KPHTMAARAIGIAYASAG 574
LGY G P RD+ KL+A L YPE + + + +RAIGIAYA+AG
Sbjct: 562 VLGYTNANGMPHRDVSKLIATLAYPERTILDKNRYPILMSRAIGIAYANAG 612
[12][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 149 bits (375), Expect = 2e-34
Identities = 63/103 (61%), Positives = 82/103 (79%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+PSGL N
Sbjct: 400 GYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 459
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 310
TQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T
Sbjct: 460 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 502
[13][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 149 bits (375), Expect = 2e-34
Identities = 63/103 (61%), Positives = 82/103 (79%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+PSGL N
Sbjct: 83 GYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 142
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 310
TQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T
Sbjct: 143 TQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 185
[14][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 103 bits (258), Expect = 7e-21
Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 3/194 (1%)
Frame = +2
Query: 2 GYQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 175
GY PT+ YP T D DE + R++NL +++ + L+PDG R T GI SG
Sbjct: 356 GYHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGY 415
Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-FITFL 352
TQ LDS N+ +I + GF ++++ ++ V GDD+ M + + F+T
Sbjct: 416 MQTQILDSLYNMVMIFTMVSRLGF---DLDKVVIKVQGDDSIFMLLCCFILIANWFLTMF 472
Query: 353 EKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT 532
+ YAL + VLS KS + E L Y+ G P RD L+AQL +PE
Sbjct: 473 KHYALYYFGAVLSDKKSEIRDSLEHAEVLKYRNRNGIPYRDPIALLAQLRHPERSDTLQA 532
Query: 533 MAARAIGIAYASAG 574
+ ARAIGIAYA+ G
Sbjct: 533 LMARAIGIAYANCG 546
[15][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
cryptic virus 1 RepID=B7ZGY8_9VIRU
Length = 587
Score = 94.0 bits (232), Expect = 8e-18
Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 10/201 (4%)
Frame = +2
Query: 2 GYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 178
GYQPT +Y T D D R+ NL ++ LPDG +RR+ G+PSGL+
Sbjct: 317 GYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSGLF 370
Query: 179 NTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD---- 337
TQ+LDS N +F I+DAM F T+ I+ VLGDD+ +T + + YD
Sbjct: 371 ITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS--LTRLRLLIPYDQHEA 423
Query: 338 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 517
F + A ++ VLS KS + + ++ LGY+ N G P RD E L+ L YP+
Sbjct: 424 FTIRFKHLAQYYFDAVLSDKKSRIHNTLNGVKCLGYRNNNGLPVRDRESLLTALLYPK-A 482
Query: 518 LKP--HTMAARAIGIAYASAG 574
+P + AR IGIAYASAG
Sbjct: 483 RRPTFEQLKARCIGIAYASAG 503
[16][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
1 RepID=Q52UL1_9VIRU
Length = 573
Score = 92.8 bits (229), Expect = 2e-17
Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Frame = +2
Query: 5 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184
Y PT YPT + R+ NL +++ T Y + G YRR G+PSG++ T
Sbjct: 294 YCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCT 348
Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEK 358
Q+ DSF N +++ + GF + +R+ L VLGDD + IPI + DF+
Sbjct: 349 QFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDDVIFGILKHIPISKWADFLQDFST 406
Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TM 535
A R+N L++ K ++ + L Y G PKRD +L+AQL +P++ + +
Sbjct: 407 EARRRFNSKLNSKKCGASSGIHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRL 466
Query: 536 AARAIGIAYASAG 574
ARAIGI YAS G
Sbjct: 467 MARAIGIYYASCG 479
[17][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
insulare T-type partitivirus RepID=C1KDH6_9VIRU
Length = 585
Score = 89.4 bits (220), Expect = 2e-16
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Frame = +2
Query: 29 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 208
TYPD + RM+ L ++ M F+LPD Y R IPSGL+ TQ+LDS N
Sbjct: 323 TYPDSKTDPI--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYN 380
Query: 209 LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNM 382
L +I + GF +I ++LV GDD+ +P + F E+ A ++
Sbjct: 381 LIMIYTILSAMGF---DITNLMILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDH 437
Query: 383 VLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK---PHTMAARAIG 553
+ K+ +T +++E LGY N G P RD+ KLVAQL +P N K + A+ G
Sbjct: 438 IARPEKTHVTNSPNEVEVLGYTNNNGYPSRDMTKLVAQLYHPRNVDKTSWKSLLMAKVCG 497
Query: 554 IAYASAGQ 577
AYAS Q
Sbjct: 498 FAYASCYQ 505
[18][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
RepID=Q5XM56_9VIRU
Length = 573
Score = 85.9 bits (211), Expect = 2e-15
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
Frame = +2
Query: 65 RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 244
R+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + G
Sbjct: 309 RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALG 368
Query: 245 FTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTL 418
F + +R+ L VLGD + IPI + DF+ A R+N L++ K ++
Sbjct: 369 FRIT--DRYFLKVLGDVVIFGILKHIPISKSADFLQDFSTEARRRFNSKLNSKKCGASSG 426
Query: 419 RSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TMAARAIGIAYASAG 574
+ L Y G PKRD +L+AQL +P++ + + ARAIGI YAS G
Sbjct: 427 IHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRLMARAIGIYYASCG 479
[19][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
mycovirus RepID=Q8B0U3_9VIRU
Length = 598
Score = 85.1 bits (209), Expect = 4e-15
Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PT +Y H ++ L +++ M LPDG Y+R GIPSGL+
Sbjct: 321 GYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLFT 375
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITFLE 355
TQ+LDSF N+ +I+ + GF S + + V GDD+ + +P +F E
Sbjct: 376 TQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDSLIRLIFHVPANMHAEFKRTFE 432
Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT- 532
YA ++ V K+ +T ++I +LGY G P RD KL+AQL +P + +
Sbjct: 433 VYAAYYFDSVARPEKTHITNNPNEINALGYDYPNGYPHRDWRKLLAQLLHPRSTAPRFSL 492
Query: 533 MAARAIGIAYAS 568
+ AR GI YAS
Sbjct: 493 LKARTCGIQYAS 504
[20][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 84.3 bits (207), Expect = 6e-15
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PT YP PD + R++NL +++ + +LPDG + GI SG +
Sbjct: 317 GYHPTISYPNAPDTNPD----RLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYFQ 372
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY-DFITFLEK 358
TQ LDS N +I + GF ++++F + V GDD+ ++ + F+
Sbjct: 373 TQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQGDDSLMISPYNYTLLEPSFLKTFGD 429
Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 538
YA E + L+ KS + E L Y+ + P+R+ +L+A L +PE ++
Sbjct: 430 YAKEYFGSTLNLKKSEILPSLDGAEVLKYRNHGTMPQREEIQLLAMLRHPERTASLPSLM 489
Query: 539 ARAIGIAYASAG 574
AR IG+ YA+ G
Sbjct: 490 ARCIGVTYANCG 501
[21][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 83.6 bits (205), Expect = 1e-14
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175
GY PT+ P +P + K R++ L +L T N +LPDG YRR GIPSGL
Sbjct: 343 GYVPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399
Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 349
+ TQ LDS+ N ++ + GF + ++ I+ V GDD+ T IP F+
Sbjct: 400 FITQLLDSWYNYTMLATILSALGF---DPKQCIIKVQGDDSIIRLTVLIPQETHERFMAH 456
Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526
L A +N +++ KS + + E L Y+ + G P RD ++AQ + + P
Sbjct: 457 LTHLATYYFNAIVNVKKSEVANTLNGREVLSYRNHNGFPHRDEINMLAQFYHTKARDTTP 516
Query: 527 HTMAARAIGIAYASAG 574
A+AIG AYAS G
Sbjct: 517 EITMAQAIGFAYASCG 532
[22][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 81.6 bits (200), Expect = 4e-14
Identities = 65/194 (33%), Positives = 97/194 (50%), Gaps = 5/194 (2%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175
GY PT+ PT+P D K R++ L +L T N +LPDG YRR GIPSGL
Sbjct: 343 GYVPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399
Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITF 349
+ TQ LDS+ N ++ + GF + + I+ V GDD+ +P + + +
Sbjct: 400 FITQLLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDN 456
Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526
L + A+ +N V++ KS + E L Y+ + G P RD ++AQ + + P
Sbjct: 457 LVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARDPTP 516
Query: 527 HTMAARAIGIAYAS 568
A+AIG AYAS
Sbjct: 517 EITMAQAIGFAYAS 530
[23][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 80.9 bits (198), Expect = 7e-14
Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGL 175
GY PT+ PT+P + + R++ L +L T N +LPDG YRR GIPSGL
Sbjct: 343 GYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGL 399
Query: 176 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITF 349
+ TQ LDS+ N ++ + F + I+ V GDD+ T IP+ + +F+
Sbjct: 400 FITQLLDSWYNYTMLATILSALHF---DPLHCIIKVQGDDSILRLTTLIPVDQHTNFMDH 456
Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 526
+ + A +N +++ KS + + E L Y+ + G P RD ++AQ + + P
Sbjct: 457 IVRLADTYFNSIVNVKKSEVRNSLNGCEVLSYRNHNGLPHRDEITMLAQFYHTKARDPTP 516
Query: 527 HTMAARAIGIAYAS 568
A+AIG AYAS
Sbjct: 517 EITMAQAIGFAYAS 530
[24][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 80.9 bits (198), Expect = 7e-14
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PT+ PT+P D K L L + +LPDG YRR GIPSGL+
Sbjct: 287 GYVPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFI 345
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLE 355
TQ LDS+ N ++ + GF + + I+ V GDD+ +P + + + L
Sbjct: 346 TQSLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLV 402
Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532
+ A+ +N V++ KS + E L Y+ + G P RD ++AQ + + P
Sbjct: 403 QLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARDPTPEI 462
Query: 533 MAARAIGIAYAS 568
A+AIG AYAS
Sbjct: 463 TMAQAIGFAYAS 474
[25][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-2 RepID=Q6BE42_9VIRU
Length = 538
Score = 80.1 bits (196), Expect = 1e-13
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Frame = +2
Query: 26 PTYPDLDE------HKLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 166
PT P LDE H Y R+ NL ++ Y NM + G ++R+ G+P
Sbjct: 252 PTLPVLDEETGTQLHPPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMP 311
Query: 167 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER-FILLVLGDDNTG--MTTIPICRMYD 337
SG++ TQ+ DSF N +I+ +L G+ E+ ++ ++GDD + +IPI +
Sbjct: 312 SGIFCTQFYDSFYNAVIIVTCLLALGY---EVRHDHLIKLMGDDALFGLLESIPIEHWSE 368
Query: 338 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 517
F+ L AL R+N LS TK T L Y G P R E ++A L +P++
Sbjct: 369 FLDALAAEALFRFNAKLSATKCGYTRTIQGATVLSYTNWNGWPVRSAEDVLAHLLHPKS- 427
Query: 518 LKPHT--MAARAIGIAYAS 568
LK + AR+IG+ YAS
Sbjct: 428 LKDSAPRLMARSIGLYYAS 446
[26][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 79.3 bits (194), Expect = 2e-13
Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PT +YP + R+ L + + + +LP+G+ Y R GIPSGL+
Sbjct: 345 GYLPTKDYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFI 404
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLE 355
TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T ++
Sbjct: 405 TQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQ 461
Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532
+ A + V+S KS + + E L Y+ +G P RD ++AQL + + P
Sbjct: 462 ELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSPEI 521
Query: 533 MAARAIGIAYASAG 574
A++IG AYAS G
Sbjct: 522 TMAQSIGFAYASFG 535
[27][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 77.8 bits (190), Expect = 6e-13
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 3/194 (1%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PT +YP R+ L + + + +LP+G+ Y R GIPSGL+
Sbjct: 345 GYLPTKDYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFI 404
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLE 355
TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T ++
Sbjct: 405 TQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTKVQ 461
Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKPHT 532
+ A + V+S KS + + E L Y+ +G P RD ++AQL + + P
Sbjct: 462 ELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSPEI 521
Query: 533 MAARAIGIAYASAG 574
A++IG AYAS G
Sbjct: 522 TMAQSIGFAYASFG 535
[28][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
Length = 367
Score = 77.4 bits (189), Expect = 7e-13
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 6/197 (3%)
Frame = +2
Query: 2 GYQPTYEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 172
GY PT +YP T+PD ++ L + + + +LP+G+ Y+R GIPSG
Sbjct: 114 GYTPTKDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSG 165
Query: 173 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFIT 346
L+ TQ +DS+ N ++ + + + + + I+ V GDD+ IP +F+
Sbjct: 166 LFITQLMDSWYNYVMLCSIL---HYMDIDPKTCIIKVQGDDSIIRLAILIPKDEHDNFLA 222
Query: 347 FLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLK 523
++ A + ++S KS L E L Y+ G P RD+ K++AQ + +
Sbjct: 223 TMQTVADHLFGAIISMDKSELRNSIENCEVLSYRHFMGLPYRDLLKMLAQFYHTKARDPT 282
Query: 524 PHTMAARAIGIAYASAG 574
P A+A+G AYA+ G
Sbjct: 283 PEITMAQAVGFAYAACG 299
[29][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 77.0 bits (188), Expect = 1e-12
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYN 181
GY PT +YP D H ++ NL ++ T L DG ++RT GI SG +
Sbjct: 314 GYIPTVDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQFT 368
Query: 182 TQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLE 355
TQ++DS N +I+ + GF E + +LGDD+ +IP F+ +
Sbjct: 369 TQFMDSIYNGLMILTILSRMGFVID--ETLPIKLLGDDSVTRLAVSIPASMHESFLIEFQ 426
Query: 356 KYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKP--H 529
+ A ++ ++ KS ++ + L Y N G P R L+ L YP++ +P
Sbjct: 427 RLADYYFSHTINVKKSKISNTPHNVSVLSYANNNGLPVRSRTSLLCALLYPKS-RRPTWE 485
Query: 530 TMAARAIGIAYASAG 574
+ ARAIG+ YAS G
Sbjct: 486 HLKARAIGVYYASCG 500
[30][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 76.6 bits (187), Expect = 1e-12
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397
Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454
Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
+ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + +
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514
Query: 521 KPHTMAARAIGIAYAS 568
P A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530
[31][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 76.6 bits (187), Expect = 1e-12
Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 2/192 (1%)
Frame = +2
Query: 5 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184
Y+PT Y + H+ R++NL ++ + L PDG Y+ T GI SG T
Sbjct: 305 YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQT 361
Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY--DFITFLEK 358
Q LDSF N+ +++ + G N E F + V GDD+ +M+ ++ L
Sbjct: 362 QLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDSLISIVERRFQMFGISYLDTLAD 420
Query: 359 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 538
A +N LS KS ++ LGY +YG P R + L++ L +PE + A
Sbjct: 421 LASYYFNAKLSVKKSFISDTPQGQYVLGYFNHYGIPYRLDDDLLSHLVFPERPQRLEETA 480
Query: 539 ARAIGIAYASAG 574
A +GIA AS G
Sbjct: 481 ASCVGIAMASMG 492
[32][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 76.6 bits (187), Expect = 1e-12
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397
Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454
Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
+ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + +
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514
Query: 521 KPHTMAARAIGIAYAS 568
P A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530
[33][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 76.6 bits (187), Expect = 1e-12
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397
Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454
Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
+ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + +
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514
Query: 521 KPHTMAARAIGIAYAS 568
P A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530
[34][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 76.6 bits (187), Expect = 1e-12
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397
Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
GL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R +
Sbjct: 398 GLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454
Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
+ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + +
Sbjct: 455 SRIVELAEYYFNSIVNVEKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514
Query: 521 KPHTMAARAIGIAYAS 568
P A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530
[35][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 75.1 bits (183), Expect = 4e-12
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 GYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGIPS 169
GY PT+ P +P ++ K + L L W F +LPDG YRR GIPS
Sbjct: 343 GYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGIPS 397
Query: 170 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFI 343
GL+ TQ DS+ N ++ + GF S I+ V GDD+ +P R +
Sbjct: 398 GLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSERHDHLM 454
Query: 344 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 520
+ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + +
Sbjct: 455 SRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHTKARDP 514
Query: 521 KPHTMAARAIGIAYAS 568
P A+AIG AYAS
Sbjct: 515 TPEITMAQAIGFAYAS 530
[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
isometric virus RepID=B7X9J3_9VIRU
Length = 587
Score = 69.7 bits (169), Expect = 2e-10
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Frame = +2
Query: 5 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 184
Y PT YP P DE R++NL ++ L G + GI SG T
Sbjct: 310 YMPTSFYPNAPT-DES----RLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQT 364
Query: 185 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-----FITF 349
Q LDSF N+ +I+ + G + + FI T P MY F+
Sbjct: 365 QLLDSFVNMIMILTCLSRAGVNINSKDFFIS---SRGRFTYRTFPEM-MYQLHGMKFLDM 420
Query: 350 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 529
+ A+ +N L+ KS + + ++ LGY +YG+P+R + L++ L +PE
Sbjct: 421 IANNAMYYFNAKLNVDKSEINWNTNGMKVLGYPNDYGTPRRTDQDLLSHLFFPERIYSLP 480
Query: 530 TMAARAIGIAYASAG 574
++A+ IGIAYAS G
Sbjct: 481 SLASTCIGIAYASCG 495
[37][TOP]
>UniRef100_Q58HI2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Helicobasidium
purpureum partitivirus RepID=Q58HI2_9VIRU
Length = 162
Score = 62.4 bits (150), Expect = 2e-08
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +2
Query: 26 PTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 199
PT+P D K R++ L +L T N +LPDG YRR GIPSGL+ TQ LDS
Sbjct: 3 PTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDS 59
Query: 200 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALER 373
+ N ++ + GF + + I+ V GDD+ +P + + + L + A+
Sbjct: 60 WYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNY 116
Query: 374 YNMVLSTTKSVLTTLRSKIESLGYQ-CNYGSPKRDIEKLVAQ 496
+N V++ KS + E L Y+ + GSP RD ++AQ
Sbjct: 117 FNAVVNVKKSEFGNSLNGREVLSYRNLHMGSPSRDEIMMLAQ 158
[38][TOP]
>UniRef100_Q4G3H2 Putative dsRNA-dependent RNA polymerase n=1 Tax=Penicillium
stoloniferum virus F RepID=Q4G3H2_9VIRU
Length = 538
Score = 55.5 bits (132), Expect = 3e-06
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Frame = +2
Query: 86 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 265
FL T++ +LPDG Y++ GIPSG + TQ + S N +L + + + N+
Sbjct: 313 FLKTYFKKTKIMLPDGSLYKKFH-GIPSGSFFTQIIGSIVN-YLAVKTLDNYFSWNARRF 370
Query: 266 RFILLVLGDDNTGMTTIPICRM-YDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 442
R VLGDD++ + IP R D + EK A E + L K + + + LG
Sbjct: 371 R----VLGDDSSFL--IPFGRSKVDGVEISEK-AWETFGFTLKLKKLRIANKQQDRKFLG 423
Query: 443 YQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAYASAG 574
YQCN +R + ++ + YPE ++ +A + Y G
Sbjct: 424 YQCNAFRYERSTTEWLSMVLYPERDVEFLEQSASRVFAFYLLGG 467