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[1][TOP]
>UniRef100_C6SVA4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SVA4_SOYBN
Length = 206
Score = 242 bits (618), Expect = 1e-62
Identities = 118/161 (73%), Positives = 139/161 (86%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK 271
MV SE EM RLYRIRKTVM+MLRDRG+LVGDFE+NMSK EF+ KYGE+MKREDLVINK+K
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 272 KNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK 451
K+ DQIYV FP+E KVG+ ++TY NRM SENVYRAILV Q++LT ++ I E++SK
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
FHLE+FQEAELLVN+K+H LVPEHQVLTD EKKTLLERYT+
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTV 161
[2][TOP]
>UniRef100_C6SXZ4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SXZ4_SOYBN
Length = 206
Score = 238 bits (608), Expect = 2e-61
Identities = 116/161 (72%), Positives = 138/161 (85%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK 271
MV SE E+ RLYRIRKTVM+MLRDR +LVGDFE+NMSK EF+ KYGE+MKREDLVINK+K
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 272 KNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK 451
K+ DQIYV FP+E KVG+ ++TY NRM SENVYRAILV Q++LT ++ I E++SK
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
FHLE+FQEAELLVN+K+H LVPEHQVLTD EKKTLLERYT+
Sbjct: 121 FHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTV 161
[3][TOP]
>UniRef100_A7PEL2 Chromosome chr11 scaffold_13, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PEL2_VITVI
Length = 206
Score = 232 bits (592), Expect = 1e-59
Identities = 113/161 (70%), Positives = 137/161 (85%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK 271
M SE E++RL+RIRKTVM+ML+DRGY VGDFE+NM+K +F K+GENMKREDLVINKAK
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 272 KNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK 451
+ SDQIYV FPEE KVG+ ++TY NRMKSENV+RAILV Q +LT ++ I E+++K
Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
FHLE+FQEAELLVN+K+HVLVPEHQVLT EKKTLLERYT+
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTV 161
[4][TOP]
>UniRef100_B9N7D1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N7D1_POPTR
Length = 206
Score = 229 bits (584), Expect = 1e-58
Identities = 109/161 (67%), Positives = 135/161 (83%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK 271
M +E E+ RL RIRKTVM+ML+DRGY VGDFE+ M++++F KYG NMKREDLVINK K
Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60
Query: 272 KNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK 451
+N SDQIYV FPEE KVG+ ++TY NRMKSENV+RAILV Q +LT ++ I E+++K
Sbjct: 61 RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
FHLE+FQEAELLVN+K+HVLVPEHQVL++ EKKTLLERYT+
Sbjct: 121 FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTV 161
[5][TOP]
>UniRef100_O81098 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Arabidopsis
thaliana RepID=O81098_ARATH
Length = 205
Score = 214 bits (544), Expect = 5e-54
Identities = 101/160 (63%), Positives = 131/160 (81%)
Frame = +2
Query: 95 VFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKK 274
+ +E E+ RLYRI+KT+M+MLRDRGY + D E+ M+K +F K+G+NMKREDLV KAK+
Sbjct: 1 MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60
Query: 275 NKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKF 454
N SDQ+Y+ FP+E KVG+ ++ Y NRMKSENV+RAILV Q +LT ++ I E++SKF
Sbjct: 61 NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKF 120
Query: 455 HLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
HLE+FQEAE+LVN+K+HVLVPEHQVLT EKKTLLERYT+
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTV 160
[6][TOP]
>UniRef100_A9NTD1 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NTD1_PICSI
Length = 191
Score = 211 bits (538), Expect = 2e-53
Identities = 98/157 (62%), Positives = 130/157 (82%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
+ + +L+RIR+TV++ML DR YLVGDFE+N +K++F +K+GE+ K+EDLVINKAK+N P
Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
S+QI+V FPEE KVG+ ++TY+ RMKSE V+RAILV Q +LT ++ + E + KFHLE
Sbjct: 64 SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFSGKFHLE 123
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+FQEAELLVN+K+HVLVPE Q+LT EKKTLLERYTL
Sbjct: 124 VFQEAELLVNIKEHVLVPEQQILTPEEKKTLLERYTL 160
[7][TOP]
>UniRef100_B3TLL2 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Elaeis
guineensis RepID=B3TLL2_ELAGV
Length = 204
Score = 211 bits (537), Expect = 3e-53
Identities = 101/158 (63%), Positives = 131/158 (82%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
SE++++RL+RIR+TVM+MLRDRGYLV D E+NM+K +F EK+GE +KREDLVINKAKKN
Sbjct: 2 SEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKND 61
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHL 460
P+DQIYV FP + KVG+ ++ Y+ RMK+ENV R ILV Q +LT ++ + E++ K+ L
Sbjct: 62 PADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAEVSQKYML 121
Query: 461 EIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
E+FQ+ ELLVN+K+HVLVPEHQVLT EKKTLLERYTL
Sbjct: 122 EVFQDTELLVNIKEHVLVPEHQVLTSEEKKTLLERYTL 159
[8][TOP]
>UniRef100_B9RKM1 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9RKM1_RICCO
Length = 225
Score = 210 bits (534), Expect = 7e-53
Identities = 108/180 (60%), Positives = 136/180 (75%), Gaps = 19/180 (10%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK 271
M SE+E+ RL+RIR+TVM+ML+DR YLV D E+N++K +F KYG+NMKREDLVI+K+K
Sbjct: 1 MTLSEDEIKRLFRIRRTVMQMLKDRTYLVTDSEINITKHQFTSKYGDNMKREDLVIHKSK 60
Query: 272 KNK-------------------PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILV 394
++ P QIYV FPEE KVG+ ++TY NRMKSENV+RAILV
Sbjct: 61 RDGSDSFYPTKLLFLNQLEAWLPLYQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILV 120
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q SLT ++ I E+ASKFHLE+FQE+ELLVN+K+HVLVPEHQVLT+ EKKTLLERYT+
Sbjct: 121 VQQSLTPFARTCIAEIASKFHLEVFQESELLVNIKEHVLVPEHQVLTNEEKKTLLERYTV 180
[9][TOP]
>UniRef100_A9RWG5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWG5_PHYPA
Length = 208
Score = 209 bits (532), Expect = 1e-52
Identities = 98/157 (62%), Positives = 130/157 (82%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
+ + RLYRIRKTVMEMLRDR Y+V D+E+ +SK++FREKYG+ KREDLVI K +++
Sbjct: 7 DEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNN 66
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
++ I+V FPEE KVG+ ++TY++RMK+ENV+RAILV Q +LT ++ + EMASK+HLE
Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMASKYHLE 126
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+FQEAELLVN+K+HVLVP H+VLT EKKTLLERYT+
Sbjct: 127 VFQEAELLVNIKEHVLVPLHEVLTPDEKKTLLERYTV 163
[10][TOP]
>UniRef100_A9RKG6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RKG6_PHYPA
Length = 208
Score = 206 bits (523), Expect = 1e-51
Identities = 96/157 (61%), Positives = 129/157 (82%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
+ + RLYRIRKTVMEMLRDR Y+V +FE+N +K+EFREKYG+ KREDLVI K K++
Sbjct: 7 DEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRSNN 66
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
++ I+V FPEE KVG+ ++TY++RMK+ENV+RAILV Q +LT ++ + EM+SK+H+E
Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMSSKYHVE 126
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+FQEAELLVN+KDHVLVP+H+VL EK TLL+RYT+
Sbjct: 127 VFQEAELLVNIKDHVLVPQHEVLNAEEKITLLQRYTV 163
[11][TOP]
>UniRef100_B4FU06 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Zea mays
RepID=B4FU06_MAIZE
Length = 210
Score = 201 bits (511), Expect = 3e-50
Identities = 100/163 (61%), Positives = 126/163 (77%)
Frame = +2
Query: 86 ATMVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINK 265
A +V E + RLYRIR+TVM+MLRDRGYLV D E+ S+ +F K+GE+ REDL+INK
Sbjct: 3 AGLVTDEATVGRLYRIRRTVMQMLRDRGYLVVDHELATSRRDFLRKFGESFHREDLLINK 62
Query: 266 AKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMA 445
KKN PSDQIYV FP + KVG+ ++ Y+ M ENV RA+LV Q +LT +K+F+ E+
Sbjct: 63 YKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELE 122
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K HLEIFQEAE+L+N+K+HVLVPEHQVLT+ EKKTLLERYTL
Sbjct: 123 PKIHLEIFQEAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTL 165
[12][TOP]
>UniRef100_B8LR68 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LR68_PICSI
Length = 194
Score = 200 bits (509), Expect = 6e-50
Identities = 96/157 (61%), Positives = 124/157 (78%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
+ + +L+RIR+TV++ML DR YLVGDFE+N +K++F +K+GE+ K+EDLVINKAK+N P
Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
S+QI+V FPEE KVG+ ++TY+ RMKSE V+RAILV Q E + KFHLE
Sbjct: 64 SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQ-----------EFSGKFHLE 112
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+FQEAELLVN+K+HVLVPE Q+LT EKKTLLERYTL
Sbjct: 113 VFQEAELLVNIKEHVLVPEQQILTPEEKKTLLERYTL 149
[13][TOP]
>UniRef100_Q5VQW7 Os01g0805800 protein n=2 Tax=Oryza sativa RepID=Q5VQW7_ORYSJ
Length = 210
Score = 197 bits (502), Expect = 4e-49
Identities = 99/163 (60%), Positives = 126/163 (77%)
Frame = +2
Query: 86 ATMVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINK 265
A +V E + RL RIR+TVM+MLRDRGYLV + E+ M + +F KYGE+ REDL+INK
Sbjct: 3 AGLVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINK 62
Query: 266 AKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMA 445
KKN PSDQIYV FP + KVG+ ++ Y+ MK+ENV RA+LV Q +LT +++F+ E+
Sbjct: 63 YKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELE 122
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K HLEIFQEAELL+N+K+HVLVPEHQVL + EKKTLLERYTL
Sbjct: 123 PKIHLEIFQEAELLINIKEHVLVPEHQVLNNEEKKTLLERYTL 165
[14][TOP]
>UniRef100_B9ETS9 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9ETS9_ORYSJ
Length = 210
Score = 197 bits (501), Expect = 5e-49
Identities = 99/163 (60%), Positives = 126/163 (77%)
Frame = +2
Query: 86 ATMVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINK 265
A +V E + RL RIR+TVM+MLRDRGYLV + E+ M + +F KYGE+ REDL+INK
Sbjct: 3 AGLVTEEVMVGRLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINK 62
Query: 266 AKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMA 445
KKN PSDQIYV FP + KVG+ ++ Y+ MK+ENV RA+LV Q +LT +++F+ E+
Sbjct: 63 YKKNDPSDQIYVFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELE 122
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K HLEIFQEAELL+N+K+HVLVPEHQVL + EKKTLLERYTL
Sbjct: 123 PKIHLEIFQEAELLINIKEHVLVPEHQVLNNGEKKTLLERYTL 165
[15][TOP]
>UniRef100_B4FGM1 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FGM1_MAIZE
Length = 206
Score = 185 bits (470), Expect = 2e-45
Identities = 86/161 (53%), Positives = 122/161 (75%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK 271
M ++E++RL+RIR+TV EMLRDRGY V D ++ + + +F E+YG ++R++L N K
Sbjct: 1 MASPDDEISRLFRIRRTVYEMLRDRGYGVRDEQIKLERHKFIERYGNPVRRDELTFNATK 60
Query: 272 KNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK 451
N PSDQIYV FP E K G+ +R Y+ +MK+ENV+ ILV Q +L+ +++ + E++ K
Sbjct: 61 LNGPSDQIYVFFPNEAKPGVKTIRNYVEKMKNENVFAGILVVQQALSAFARSAVQEVSQK 120
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+HLE+FQEAELLVN+KDHVLVPEH +LT +KKTLLERYT+
Sbjct: 121 YHLEVFQEAELLVNIKDHVLVPEHVLLTPEDKKTLLERYTV 161
[16][TOP]
>UniRef100_Q7XUF8 OJ991113_30.8 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q7XUF8_ORYSJ
Length = 205
Score = 182 bits (461), Expect = 2e-44
Identities = 82/158 (51%), Positives = 124/158 (78%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
SE E +RL+RIR+TVM+MLRDRGYLV + ++++ + +F ++G+ + R+ LV ++ KK+
Sbjct: 3 SEEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDN 62
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHL 460
+DQIYV FP++ K G+ +R+Y+ RMK E+V+ ILV Q +L+ +++ + E++ KFHL
Sbjct: 63 GADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAVQEVSQKFHL 122
Query: 461 EIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
E+FQEAELLVN+KDH LVPEH++LT +KKTLLERYT+
Sbjct: 123 EVFQEAELLVNIKDHTLVPEHELLTPEQKKTLLERYTV 160
[17][TOP]
>UniRef100_B7EQI7 cDNA clone:J023098I05, full insert sequence n=1 Tax=Oryza sativa
Japonica Group RepID=B7EQI7_ORYSJ
Length = 167
Score = 182 bits (461), Expect = 2e-44
Identities = 82/158 (51%), Positives = 124/158 (78%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
SE E +RL+RIR+TVM+MLRDRGYLV + ++++ + +F ++G+ + R+ LV ++ KK+
Sbjct: 3 SEEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDN 62
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHL 460
+DQIYV FP++ K G+ +R+Y+ RMK E+V+ ILV Q +L+ +++ + E++ KFHL
Sbjct: 63 GADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAVQEVSQKFHL 122
Query: 461 EIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
E+FQEAELLVN+KDH LVPEH++LT +KKTLLERYT+
Sbjct: 123 EVFQEAELLVNIKDHTLVPEHELLTPEQKKTLLERYTV 160
[18][TOP]
>UniRef100_A3AV22 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=A3AV22_ORYSJ
Length = 217
Score = 182 bits (461), Expect = 2e-44
Identities = 82/158 (51%), Positives = 124/158 (78%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
SE E +RL+RIR+TVM+MLRDRGYLV + ++++ + +F ++G+ + R+ LV ++ KK+
Sbjct: 3 SEEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKKDN 62
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHL 460
+DQIYV FP++ K G+ +R+Y+ RMK E+V+ ILV Q +L+ +++ + E++ KFHL
Sbjct: 63 GADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAVQEVSQKFHL 122
Query: 461 EIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
E+FQEAELLVN+KDH LVPEH++LT +KKTLLERYT+
Sbjct: 123 EVFQEAELLVNIKDHTLVPEHELLTPEQKKTLLERYTV 160
[19][TOP]
>UniRef100_C1MXV4 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MXV4_9CHLO
Length = 206
Score = 164 bits (414), Expect = 6e-39
Identities = 82/157 (52%), Positives = 113/157 (71%), Gaps = 1/157 (0%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S ++T+L+RI KTV +ML RGYLV E+ KD FRE YG++ KRE L + +++
Sbjct: 3 SSEKVTKLFRIHKTVHKMLNARGYLVQQKELERDKDSFREAYGDDPKRESLTLMLPRRDD 62
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK-FH 457
PS+ I+V FPEE KVG+ ++ Y RMK E+V+RAI+V Q+SLT +K + E AS+ F+
Sbjct: 63 PSENIFVFFPEEEKVGVKTIKEYAKRMKDESVFRAIIVVQASLTPFAKQSLLECASQSFY 122
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E FQE ELLVN+ +HVLVPEH +L+D EK+TLL RY
Sbjct: 123 IEQFQEMELLVNITEHVLVPEHVLLSDAEKRTLLARY 159
[20][TOP]
>UniRef100_A8J805 DNA-directed RNA polymerase II, 23 kDa polypeptide n=1
Tax=Chlamydomonas reinhardtii RepID=A8J805_CHLRE
Length = 206
Score = 163 bits (413), Expect = 8e-39
Identities = 74/156 (47%), Positives = 115/156 (73%)
Frame = +2
Query: 107 NEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPS 286
+ +TRL+R+R+T ++ML DRGYLV E+ +KD+FR+++GEN +++DL I +++ P+
Sbjct: 2 DNLTRLWRVRRTCLQMLNDRGYLVSQEEIGTTKDQFRDRFGENPRKDDLTILVPRQDDPT 61
Query: 287 DQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEI 466
+QI+V FPEE KVG+ ++ RMK E V RAI+V S T +K+ + +M K+H+E
Sbjct: 62 EQIFVFFPEEQKVGVKTIKLLAERMKDEKVNRAIMVTPSKFTPFAKSALEDMRPKYHIEH 121
Query: 467 FQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
F E+ELLVN+ +HVLVPEH++L+ EK+TLL+RY +
Sbjct: 122 FLESELLVNITEHVLVPEHRILSPDEKRTLLDRYKI 157
[21][TOP]
>UniRef100_UPI000180C3C9 PREDICTED: similar to 25-kDa subunit RNA polymerase n=1 Tax=Ciona
intestinalis RepID=UPI000180C3C9
Length = 210
Score = 159 bits (401), Expect = 2e-37
Identities = 81/162 (50%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E RL+RIRKTVM++ DRGYLV E++ S +EF+E++G+ R+DL I A
Sbjct: 4 EAETYRLWRIRKTVMQLCHDRGYLVTQHELDQSLEEFKEEFGDKPSERRPGRQDLTILVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVG+ ++TY RM+ EN+ RAI+V Q S+T +K +F+MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGVKTIKTYCQRMQEENIQRAIIVVQQSMTPSAKQSLFDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E ELL+N+ +H LVPEH VLT EK LL RY L
Sbjct: 124 KYILEQFLEQELLINITEHELVPEHVVLTPEEKSELLTRYKL 165
[22][TOP]
>UniRef100_A4RWP8 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RWP8_OSTLU
Length = 205
Score = 158 bits (399), Expect = 3e-37
Identities = 80/157 (50%), Positives = 109/157 (69%), Gaps = 1/157 (0%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S ++ TRL+R+RKT+ +ML RGYLV E+ D F E +GE KRE L I K++
Sbjct: 2 SNDKRTRLFRVRKTIHKMLAARGYLVSAKELERDIDSFTEDFGEEPKRESLTILAPKRDD 61
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFE-MASKFH 457
PS+ I+V FP+E KVG+ ++ RMK ENV+RAI+V Q+SLT +K + E KF+
Sbjct: 62 PSENIFVFFPDEEKVGVKTIKDLAKRMKDENVFRAIIVVQASLTPFAKQSLLECQTQKFY 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E FQE ELLVN+ DHVLVPEH +L+D +K+TLL+RY
Sbjct: 122 IEQFQETELLVNIIDHVLVPEHILLSDDQKRTLLDRY 158
[23][TOP]
>UniRef100_Q01A87 RNA polymerase I, II and III 24.3 kDa subunit (ISS) n=1
Tax=Ostreococcus tauri RepID=Q01A87_OSTTA
Length = 1124
Score = 157 bits (398), Expect = 4e-37
Identities = 79/157 (50%), Positives = 108/157 (68%), Gaps = 1/157 (0%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S + RL+R+RKT+ +ML RGYLV E+ D F E++GE KR+ L I +K+
Sbjct: 921 SSDRRNRLFRVRKTIHKMLAARGYLVSARELERDADSFAEEFGEEPKRDSLTILAPRKDD 980
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFE-MASKFH 457
PS+ I+V FP+E KVG+ ++ RMK ENV+RAI+V Q+SLT +K + E KF+
Sbjct: 981 PSENIFVFFPDEEKVGVKTIKDLAKRMKEENVFRAIIVVQASLTPFAKQSLLECQTQKFY 1040
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E FQE ELLVN+ DHVLVPEH +L+D +K+TLLERY
Sbjct: 1041 IEQFQETELLVNIVDHVLVPEHILLSDEQKRTLLERY 1077
[24][TOP]
>UniRef100_C1EDR8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDR8_9CHLO
Length = 204
Score = 154 bits (388), Expect = 6e-36
Identities = 77/152 (50%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Frame = +2
Query: 116 TRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQI 295
TRL+RIRKTV +ML RGYLV E++ KD F E++GE+ +R+ L + + P+ I
Sbjct: 6 TRLFRIRKTVCKMLNARGYLVAQAELDRDKDSFTEEFGEDPRRDALTLQFDLREDPTQHI 65
Query: 296 YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFE-MASKFHLEIFQ 472
+V FP+E KVG+ ++ Y RMK E V RAI+V Q SLT ++ + E A KF++E FQ
Sbjct: 66 FVFFPDEEKVGVKTIKEYAKRMKDEQVNRAIIVVQQSLTPFARQSLLECQAQKFYIEQFQ 125
Query: 473 EAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
EAELLVN+ DHVLVPEH +L+D +K+ LL+RY
Sbjct: 126 EAELLVNITDHVLVPEHILLSDEQKRVLLDRY 157
[25][TOP]
>UniRef100_UPI00015B5456 PREDICTED: similar to ENSANGP00000006082 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5456
Length = 210
Score = 150 bits (380), Expect = 5e-35
Identities = 74/162 (45%), Positives = 111/162 (68%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKTVM++ DRGYLV E++ + ++F+E++G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP+E K+GI ++TY RM+ E ++RAI+V QS +T +K + +MA
Sbjct: 64 HNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQSGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH VLT EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHIVLTPDEKEELLTRYKL 165
[26][TOP]
>UniRef100_UPI000186E78B DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186E78B
Length = 210
Score = 150 bits (379), Expect = 7e-35
Identities = 72/162 (44%), Positives = 112/162 (69%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKTVM++ DRGYLV E++ + ++F+E++G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKIPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP++ K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPDDPKIGIKTIKTYCQRMQEENIHRAIIVVQQGMTPSAKQSLSDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EK+ LL+RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTPEEKQELLQRYKL 165
[27][TOP]
>UniRef100_B3MEP0 GF12445 n=1 Tax=Drosophila ananassae RepID=B3MEP0_DROAN
Length = 210
Score = 150 bits (378), Expect = 9e-35
Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ + ++F+E +G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPSRSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTAEEKQELLSRYKL 165
[28][TOP]
>UniRef100_B4MK71 GK20665 n=1 Tax=Drosophila willistoni RepID=B4MK71_DROWI
Length = 210
Score = 149 bits (377), Expect = 1e-34
Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ + ++F+E +G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHDLVPEHVVMTAEEKQELLSRYKL 165
[29][TOP]
>UniRef100_Q7JZF5 Rpb5 n=5 Tax=melanogaster subgroup RepID=Q7JZF5_DROME
Length = 210
Score = 149 bits (377), Expect = 1e-34
Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ + ++F+E +G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSEKRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTVEEKQELLSRYKL 165
[30][TOP]
>UniRef100_A6N9W6 25-kDa subunit RNA polymerase n=1 Tax=Ornithodoros parkeri
RepID=A6N9W6_ORNPR
Length = 210
Score = 149 bits (377), Expect = 1e-34
Identities = 73/162 (45%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ + D+F++++G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLDQFKQQFGDKPSERRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP+E K+GI ++TY RM+ EN+ RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQQGMTPSAKQALTDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH VLT EK LL RY L
Sbjct: 124 KYILEYFLESELLINITEHELVPEHVVLTPEEKAELLARYKL 165
[31][TOP]
>UniRef100_UPI000051A7F2 PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
RepID=UPI000051A7F2
Length = 179
Score = 149 bits (376), Expect = 1e-34
Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKTVM++ DRGYLV E++ + ++F+E++G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP+E K+GI ++TY RM+ E ++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH VLT EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHIVLTPDEKEELLTRYKL 165
[32][TOP]
>UniRef100_UPI00003C0CAC PREDICTED: similar to Rpb5 CG11979-PA n=1 Tax=Apis mellifera
RepID=UPI00003C0CAC
Length = 210
Score = 149 bits (376), Expect = 1e-34
Identities = 73/162 (45%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKTVM++ DRGYLV E++ + ++F+E++G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP+E K+GI ++TY RM+ E ++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQLFVFFPDEPKIGIKTIKTYCQRMQEEKIHRAIIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH VLT EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHIVLTPDEKEELLTRYKL 165
[33][TOP]
>UniRef100_B0X7A5 DNA-directed RNA polymerase II 23 kDa polypeptide n=3 Tax=Culicidae
RepID=B0X7A5_CULQU
Length = 210
Score = 149 bits (376), Expect = 1e-34
Identities = 72/160 (45%), Positives = 111/160 (69%), Gaps = 5/160 (3%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKAKK 274
E +L+RIRKTVM++ DRGYLV E++ + ++F+E++G+ R DL++ A
Sbjct: 6 ETYKLWRIRKTVMQLSHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPARSDLIVLVAHN 65
Query: 275 NKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKF 454
+ P+DQ++V FP+E K+GI ++TY RM+ EN++RAI+V Q+ +T +K + +MA K+
Sbjct: 66 DDPTDQMFVFFPDEPKIGIKTIKTYCTRMQEENIHRAIVVVQAGMTPSAKQSLVDMAPKY 125
Query: 455 HLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
LE F E+ELL+N+ +H LVPEH V+T EK+ LL RY L
Sbjct: 126 ILEQFLESELLINITEHELVPEHVVMTPEEKQELLARYKL 165
[34][TOP]
>UniRef100_B4KPZ3 GI19761 n=2 Tax=Drosophila RepID=B4KPZ3_DROMO
Length = 210
Score = 149 bits (375), Expect = 2e-34
Identities = 72/162 (44%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ + ++F+E +G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPSRSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T +K+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTAEDKQELLSRYKL 165
[35][TOP]
>UniRef100_B4J892 GH20567 n=1 Tax=Drosophila grimshawi RepID=B4J892_DROGR
Length = 210
Score = 149 bits (375), Expect = 2e-34
Identities = 72/162 (44%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ + ++F+E +G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKEMFGDKPSDKRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T +K+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTAEDKQELLSRYKL 165
[36][TOP]
>UniRef100_B5DLL1 GA22602 n=2 Tax=pseudoobscura subgroup RepID=B5DLL1_DROPS
Length = 210
Score = 148 bits (374), Expect = 3e-34
Identities = 72/162 (44%), Positives = 110/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ + ++F++ +G+ R DL++ A
Sbjct: 4 EAETYKLWRIRKTIMQLSHDRGYLVTQDELDQTLEQFKDMFGDKPSEKRPARSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCTRMQEENIHRAIVVVQGGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTVEEKQELLSRYKL 165
[37][TOP]
>UniRef100_UPI0000D56A05 PREDICTED: similar to AGAP010064-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D56A05
Length = 210
Score = 148 bits (373), Expect = 3e-34
Identities = 74/162 (45%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKTVM++ DRGYLV E++ + ++F+E+ G+ R DL I A
Sbjct: 4 EAETYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQCGDKPSEKRPSRNDLTILVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP+E K+GI ++TY RM+ EN++RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPDEPKIGIKAIKTYCQRMQDENIHRAIIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHVVMTPEEKQELLTRYKL 165
[38][TOP]
>UniRef100_C1C1G9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caligus clemensi RepID=C1C1G9_9MAXI
Length = 210
Score = 147 bits (372), Expect = 4e-34
Identities = 72/162 (44%), Positives = 111/162 (68%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E+E +L+++RKTVM + DRGYLV E++ ++D+F+ ++G+ R DL I A
Sbjct: 4 ESETYKLWKVRKTVMSLCHDRGYLVTQDELDQTQDQFKVQFGDKPSEKQPSRNDLTILVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPE+ K+G+ +RTY RM+ EN+ RAI+V Q+ +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEDPKIGVKHIRTYCKRMQEENITRAIIVVQAGMTPSAKQSLMDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EKK LL++Y L
Sbjct: 124 KYILEQFLESELLINLTEHDLVPEHVVMTPEEKKELLKKYKL 165
[39][TOP]
>UniRef100_C4WY48 ACYPI000388 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WY48_ACYPI
Length = 210
Score = 147 bits (370), Expect = 7e-34
Identities = 74/162 (45%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKTVM++ DRGYLV E++ + ++F+E++G+ R DL++ A
Sbjct: 4 ECESYKLWRIRKTVMQLCHDRGYLVTQDELDQTLEQFKEQFGDKPSEKRPGRSDLIVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE K+GI ++TY RM+ E + RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKIGIKTIKTYCQRMQEETITRAIIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH VLT EK+ LL RY L
Sbjct: 124 KYILEQFLESELLINITEHELVPEHIVLTPDEKQELLCRYKL 165
[40][TOP]
>UniRef100_Q5DDM1 SJCHGC05306 protein n=1 Tax=Schistosoma japonicum
RepID=Q5DDM1_SCHJA
Length = 206
Score = 144 bits (364), Expect = 4e-33
Identities = 73/161 (45%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
Frame = +2
Query: 95 VFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKK 274
+ ++E +L+RIRKT+++M +DRGYLV E+ S ++F+ G+ R+DL++ +
Sbjct: 1 MLDDSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPARKDLLMVVNHE 60
Query: 275 NKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQ-SSLTTQSKNFIFEMASK 451
P+D +YV FPEE KV + +R Y+N+M+ ++ YRAILV Q LT +K I E++ K
Sbjct: 61 EDPADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIAELSCK 120
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ LE F E EL+VN+ +H LVP+H VLT EKK LLERY L
Sbjct: 121 YTLECFFENELMVNITEHQLVPQHDVLTQEEKKELLERYRL 161
[41][TOP]
>UniRef100_Q6DEG5 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Danio
rerio RepID=Q6DEG5_DANRE
Length = 210
Score = 144 bits (363), Expect = 5e-33
Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEFR ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFRSQFGDKPSEGRPRRNDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKL 165
[42][TOP]
>UniRef100_C4PZ68 DNA-directed RNA polymerase II, putative (Fragment) n=1
Tax=Schistosoma mansoni RepID=C4PZ68_SCHMA
Length = 208
Score = 144 bits (363), Expect = 5e-33
Identities = 73/158 (46%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
++E +L+RIRKT+++M +DRGYLV E+ S ++F+ G+ R+DL++ + P
Sbjct: 6 DSETYKLWRIRKTILKMCKDRGYLVMPKELEQSLEDFKATVGDPPTRKDLLMVVNHEEDP 65
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQ-SSLTTQSKNFIFEMASKFHL 460
+D +YV FPEE KV + +R Y+N+M+ ++ YRAILV Q LT +K I E++ K+ L
Sbjct: 66 ADMLYVFFPEEEKVNMKTVRAYLNQMQQDSTYRAILVLQEKGLTPSAKTAIAELSCKYTL 125
Query: 461 EIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
E F E EL+VN+ +H LVP+H VLT EKK LLERY L
Sbjct: 126 ECFFENELMVNITEHQLVPQHNVLTQEEKKELLERYRL 163
[43][TOP]
>UniRef100_C1BRK0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caligus rogercresseyi RepID=C1BRK0_9MAXI
Length = 210
Score = 144 bits (363), Expect = 5e-33
Identities = 72/162 (44%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+++RKTVM + DRGYLV E++ + D+F+ ++G+ R DL I A
Sbjct: 4 EAENYKLWKVRKTVMSLCHDRGYLVTQDELDQTLDQFKVQFGDKPSEKQPSRNDLTILVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP++ K+GI +RTY RM+ EN+ RAI++ QS +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPDDPKIGIKHIRTYCKRMQEENITRAIILVQSGMTPSAKQSLMDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EKK LL++Y L
Sbjct: 124 KYILEQFLESELLINLTEHDLVPEHVVMTPEEKKELLKKYKL 165
[44][TOP]
>UniRef100_C3ZQF0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZQF0_BRAFL
Length = 210
Score = 143 bits (361), Expect = 8e-33
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E +L+RIRKT+M++ DRGYLV E++ D+F++++G+ R+DLV+ A
Sbjct: 4 EQETYKLWRIRKTIMQLCHDRGYLVTQDELDQRLDQFKDQFGDKPSEGKPARKDLVVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V F +E K+GI ++ Y RM+ EN+ RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFADEPKIGIKTIKMYCQRMQEENISRAIIVVQMGMTPSAKQALVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+ELL+N+ +H LVPEH V+T EK LL RY L
Sbjct: 124 KYILEQFLESELLINITEHQLVPEHVVMTPEEKAELLARYRL 165
[45][TOP]
>UniRef100_C1C3Q7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Rana catesbeiana RepID=C1C3Q7_RANCA
Length = 210
Score = 143 bits (360), Expect = 1e-32
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKDEVTELLARYKL 165
[46][TOP]
>UniRef100_C1BIS3 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Osmerus
mordax RepID=C1BIS3_OSMMO
Length = 210
Score = 143 bits (360), Expect = 1e-32
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEELSELLTRYKL 165
[47][TOP]
>UniRef100_Q4S3C9 Chromosome 1 SCAF14751, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4S3C9_TETNG
Length = 210
Score = 142 bits (359), Expect = 1e-32
Identities = 72/162 (44%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKL 165
[48][TOP]
>UniRef100_UPI0000587A08 PREDICTED: similar to RPB5 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000587A08
Length = 210
Score = 142 bits (358), Expect = 2e-32
Identities = 70/162 (43%), Positives = 106/162 (65%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E RL+R+R+T+M++ DRGYLV E++ + ++F+E++G+ R+DL + A
Sbjct: 4 EAETYRLWRVRRTIMQLCHDRGYLVTQEELDQTLEQFKEQFGDKPSENRPSRKDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVG+ ++ Y RM+ EN+ RAI+ Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEKKVGMKTIKAYCQRMQEENITRAIITVQEKMTPSAKTSLGDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F EAELL+N+ +H VPEH V+T EK LL RY L
Sbjct: 124 KYILEQFLEAELLINITEHDFVPEHVVMTGEEKAELLARYKL 165
[49][TOP]
>UniRef100_Q28HF5 Polymerase (RNA) II (DNA directed) polypeptide E n=2 Tax=Xenopus
RepID=Q28HF5_XENTR
Length = 210
Score = 142 bits (358), Expect = 2e-32
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKDEVTELLARYKL 165
[50][TOP]
>UniRef100_A8XGH1 C. briggsae CBR-RPB-5 protein n=1 Tax=Caenorhabditis briggsae
RepID=A8XGH1_CAEBR
Length = 211
Score = 142 bits (358), Expect = 2e-32
Identities = 74/166 (44%), Positives = 106/166 (63%), Gaps = 5/166 (3%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLV 256
M E E RL+RIRKTV++M+ DRGYLV E++ + F+E +G+ R DL
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLETFKETFGDRPSEKKPARSDLT 60
Query: 257 INKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
I A + P+DQ++V FPE+ K+GI ++ +M+ +N+ RAI+V Q+ +T +K I
Sbjct: 61 ILVAHNDDPADQMFVFFPEDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIG 120
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+MA K+ LE F EAEL+VN+ +H LVPEH V+T EK LL RY L
Sbjct: 121 DMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKL 166
[51][TOP]
>UniRef100_Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Pongo abelii RepID=RPAB1_PONAB
Length = 210
Score = 142 bits (358), Expect = 2e-32
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EFR ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFRAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[52][TOP]
>UniRef100_Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Caenorhabditis elegans RepID=RPAB1_CAEEL
Length = 211
Score = 142 bits (357), Expect = 2e-32
Identities = 74/166 (44%), Positives = 106/166 (63%), Gaps = 5/166 (3%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLV 256
M E E RL+RIRKTV++M+ DRGYLV E++ + F+ +YG+ R DL
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQDELDQPLETFKVQYGDRPSEKKPARSDLT 60
Query: 257 INKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
I A + P+DQ++V FPE+ K+GI ++ +M+ +N+ RAI+V Q+ +T +K I
Sbjct: 61 ILVAHNDDPADQMFVFFPEDAKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIG 120
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+MA K+ LE F EAEL+VN+ +H LVPEH V+T EK LL RY L
Sbjct: 121 DMAPKYMLEHFLEAELMVNITEHELVPEHVVMTAEEKAELLARYKL 166
[53][TOP]
>UniRef100_UPI00005A3E0E PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A3E0E
Length = 208
Score = 141 bits (355), Expect = 4e-32
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[54][TOP]
>UniRef100_UPI0000EB19D6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA
polymerases I, II, and III subunit ABC1) (DNA-directed
RNA polymerase II subunit E) (RPB5) (DNA-directed RNA
polymerase II 23 kDa polypeptide) (XAP4). n=1 Tax=Canis
lupus familiaris RepID=UPI0000EB19D6
Length = 212
Score = 141 bits (355), Expect = 4e-32
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[55][TOP]
>UniRef100_Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=3
Tax=Murinae RepID=RPAB1_MOUSE
Length = 210
Score = 141 bits (355), Expect = 4e-32
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[56][TOP]
>UniRef100_B5FX59 Putative DNA directed RNA polymerase II polypeptide E n=2
Tax=Neognathae RepID=B5FX59_TAEGU
Length = 210
Score = 140 bits (354), Expect = 5e-32
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[57][TOP]
>UniRef100_C3KI95 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Anoplopoma fimbria RepID=C3KI95_9PERC
Length = 210
Score = 140 bits (354), Expect = 5e-32
Identities = 71/162 (43%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RAI+V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V++ E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMSKEEVVELLARYKL 165
[58][TOP]
>UniRef100_C1BZT4 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Esox lucius RepID=C1BZT4_ESOLU
Length = 210
Score = 140 bits (354), Expect = 5e-32
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLAA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA +V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEELSELLLRYKL 165
[59][TOP]
>UniRef100_C6K8L9 RNA polymerase II B subunit n=1 Tax=Caenorhabditis brenneri
RepID=C6K8L9_CAEBE
Length = 211
Score = 140 bits (354), Expect = 5e-32
Identities = 73/166 (43%), Positives = 105/166 (63%), Gaps = 5/166 (3%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLV 256
M E E RL+RIRKTV++M+ DRGYLV E++ F+E +G+ R DL
Sbjct: 1 MADDELETYRLWRIRKTVLQMVHDRGYLVAQEELDQPLGHFKETFGDRPSEKKPARADLT 60
Query: 257 INKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
I A + P+DQ++V FP++ K+GI ++ +M+ +N+ RAI+V Q+ +T +K I
Sbjct: 61 ILVAHNDDPADQMFVFFPDDTKIGIKTIKAICQQMQEQNISRAIIVVQTGMTPSAKQSIG 120
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+MA K+ LE F EAEL+VN+ +H LVPEH V+T EK LL RY L
Sbjct: 121 DMAPKYMLEHFLEAELMVNITEHELVPEHVVMTSEEKAELLARYKL 166
[60][TOP]
>UniRef100_B5X8S7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Salmo salar RepID=B5X8S7_SALSA
Length = 210
Score = 140 bits (353), Expect = 7e-32
Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA +V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEELSELLLRYKL 165
[61][TOP]
>UniRef100_UPI0000D9E960 PREDICTED: similar to DNA directed RNA polymerase II polypeptide E
n=1 Tax=Macaca mulatta RepID=UPI0000D9E960
Length = 278
Score = 140 bits (352), Expect = 9e-32
Identities = 69/162 (42%), Positives = 105/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E + RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEDTYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[62][TOP]
>UniRef100_B5X957 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=2
Tax=Euteleostei RepID=B5X957_SALSA
Length = 210
Score = 139 bits (350), Expect = 2e-31
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
+ E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 DEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA +V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHIVMTKEELSELLLRYKL 165
[63][TOP]
>UniRef100_P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Homo sapiens RepID=RPAB1_HUMAN
Length = 210
Score = 139 bits (350), Expect = 2e-31
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ + G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQSGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[64][TOP]
>UniRef100_UPI000056951D UPI000056951D related cluster n=1 Tax=Danio rerio
RepID=UPI000056951D
Length = 211
Score = 139 bits (349), Expect = 2e-31
Identities = 72/163 (44%), Positives = 107/163 (65%), Gaps = 6/163 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKTVM++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTVMQLCHDRGYLVTQDELDQTLDEFKIQFGDRPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFP-EEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMA 445
+ P+DQ++V FP EE+KVGI ++ Y RM+ EN+ RA++V Q+ +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPVEELKVGIKTIKMYCQRMQEENITRAVIVVQTGMTPSAKQSLVDMA 123
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 PKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKL 166
[65][TOP]
>UniRef100_B4GBQ3 GL10501 n=1 Tax=Drosophila persimilis RepID=B4GBQ3_DROPE
Length = 210
Score = 137 bits (346), Expect = 4e-31
Identities = 71/162 (43%), Positives = 107/162 (66%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E+ +++RIRKTV++M DRGYLV E++ + F+E +G+ R D+ + A
Sbjct: 4 EEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ E++YRAI+V Q+S+T ++ + EMA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQALVEMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F EAEL+ N+ ++ VPEH V+T EK+ LL RY L
Sbjct: 124 KYVLEQFLEAELMFNITENENVPEHVVMTPDEKQELLSRYKL 165
[66][TOP]
>UniRef100_UPI00005A3E0F PREDICTED: similar to DNA-directed RNA polymerase II 23 kDa
polypeptide (RPB25) (RPB5) (RPABC1) isoform 2 n=1
Tax=Canis lupus familiaris RepID=UPI00005A3E0F
Length = 162
Score = 137 bits (345), Expect = 6e-31
Identities = 68/159 (42%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
K+ LE F + ELL+N+ +H LVPEH V+T E LL R
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLAR 162
[67][TOP]
>UniRef100_Q8R0H0 Polr2e protein n=1 Tax=Mus musculus RepID=Q8R0H0_MOUSE
Length = 162
Score = 137 bits (345), Expect = 6e-31
Identities = 68/159 (42%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
K+ LE F + ELL+N+ +H LVPEH V+T E LL R
Sbjct: 124 KYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLAR 162
[68][TOP]
>UniRef100_A8NU15 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NU15_COPC7
Length = 273
Score = 137 bits (344), Expect = 8e-31
Identities = 69/159 (43%), Positives = 102/159 (64%), Gaps = 3/159 (1%)
Frame = +2
Query: 107 NEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM---KREDLVINKAKKN 277
+E RL+++ KT+ E+++DRG+ V D E+NMS + FR+ YG NM R L +
Sbjct: 70 DETARLWKVSKTIHELVKDRGFSVSDEEINMSLERFRQVYGNNMGVIDRNQLNFYTHHRL 129
Query: 278 KPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
PSDQI+V F EE VG+ +R + M+ + + R I++ +++T+ ++ I MAS +
Sbjct: 130 NPSDQIFVYFTEEPNVGVKAMRKLLGIMEEKAIQRGIIIFPATMTSSARKVISAMASTYR 189
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
LE F EA+LLVN+ H LVP H+VL+ EKKTLLERY L
Sbjct: 190 LEEFAEADLLVNITHHTLVPRHEVLSPEEKKTLLERYRL 228
[69][TOP]
>UniRef100_Q2T9T3 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Bos taurus RepID=RPAB1_BOVIN
Length = 210
Score = 137 bits (344), Expect = 8e-31
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV ++ + +EF+ ++G +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F + ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 124 KYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKL 165
[70][TOP]
>UniRef100_B5E0K0 GA24393 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5E0K0_DROPS
Length = 210
Score = 136 bits (343), Expect = 1e-30
Identities = 70/162 (43%), Positives = 107/162 (66%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E+ +++RIRKTV++M DRGYLV E++ + F+E +G+ R D+ + A
Sbjct: 4 EEELYKMWRIRKTVLQMCHDRGYLVTQEELDQTLQGFQEIFGDRPSENCPSRADITLLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FP+E KVGI ++ Y RM+ E++YRAI+V Q+S+T ++ + EMA
Sbjct: 64 HNDDPTDQMFVFFPQEPKVGIKDIKRYCLRMQEESIYRAIIVVQNSITPSARQALVEMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F EAEL+ N+ ++ VPEH V+T EK+ LL RY L
Sbjct: 124 KYVLEQFLEAELMFNITENENVPEHVVMTPDEKQELLSRYKL 165
[71][TOP]
>UniRef100_B3S3Q9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S3Q9_TRIAD
Length = 210
Score = 135 bits (340), Expect = 2e-30
Identities = 67/162 (41%), Positives = 103/162 (63%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKK--- 274
E E +L+RIRKTVM+M DRGY+V E++ + D+F E++ M V
Sbjct: 4 EEEAYKLWRIRKTVMQMCHDRGYMVSQEELDQTFDQFHEQFYSEMSESSQVRGLLSMLVH 63
Query: 275 --NKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P++Q++V FP+E KVGI+ ++ Y RM+ EN+ RAI++ QS +T +K + +MA
Sbjct: 64 HIDDPTEQLFVFFPDEPKVGINTIKKYCQRMQRENINRAIIIIQSGMTPTAKQSLIDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
K+ LE F E+EL++N+ +H LVP+H V++ EK LL RY L
Sbjct: 124 KYTLESFMESELMINITEHHLVPKHIVMSPEEKAELLARYKL 165
[72][TOP]
>UniRef100_B8C1Q1 RPB5,-like protein to RNA polymerase i n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8C1Q1_THAPS
Length = 226
Score = 134 bits (336), Expect = 6e-30
Identities = 69/155 (44%), Positives = 100/155 (64%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E +RL+R+ KTV ML RGY+V M+ +F +++GE RE L I K + ++
Sbjct: 27 EASRLFRVYKTVSAMLSKRGYMVSREMREMTPFDFTQRFGEYPSREGLTILVEKADDETN 86
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
Q++V FPE+ KVG+ ++ +RMK ENV AILV + +T +K + EM+ F LE F
Sbjct: 87 QLFVFFPEDEKVGVKPIKILTDRMKDENVSNAILVLRGDITPFAKQAVLEMSDSFRLEHF 146
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+EAELLV++ +H LVPEH VL+ EK+ LL+RY L
Sbjct: 147 KEAELLVDITEHTLVPEHLVLSQNEKQELLKRYRL 181
[73][TOP]
>UniRef100_C5KHW9 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
Tax=Perkinsus marinus ATCC 50983 RepID=C5KHW9_9ALVE
Length = 213
Score = 132 bits (333), Expect = 1e-29
Identities = 70/155 (45%), Positives = 105/155 (67%), Gaps = 5/155 (3%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRE----DLVINKAKKNKPS 286
RL+R+RKT+ E+L+DRGYLV +N +K+ F +++ E +R+ DL+I +K++ PS
Sbjct: 12 RLWRVRKTIFELLQDRGYLVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSKQDDPS 71
Query: 287 DQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
DQ+ V FP+E K VG+ +RT +M+ + + RAILV Q LT +K I E + + +E
Sbjct: 72 DQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAIQEASPQMEIE 131
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+F E+EL+VN+ H LVPEH+ LT EK+ LLERY
Sbjct: 132 VFNESELVVNITHHELVPEHKPLTAEEKRLLLERY 166
[74][TOP]
>UniRef100_UPI0000E24E5A PREDICTED: similar to Polymerase (RNA) II (DNA directed)
polypeptide E, 25kDa n=1 Tax=Pan troglodytes
RepID=UPI0000E24E5A
Length = 230
Score = 132 bits (331), Expect = 2e-29
Identities = 65/152 (42%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Frame = +2
Query: 134 RKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKAKKNKPSDQIY 298
RKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A + P+DQ++
Sbjct: 34 RKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMF 93
Query: 299 VLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEA 478
V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA K+ LE F +
Sbjct: 94 VFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQ 153
Query: 479 ELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
ELL+N+ +H LVPEH V+T E LL RY L
Sbjct: 154 ELLINITEHELVPEHVVMTKEEVTELLARYKL 185
[75][TOP]
>UniRef100_A9SWJ6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SWJ6_PHYPA
Length = 211
Score = 132 bits (331), Expect = 2e-29
Identities = 70/159 (44%), Positives = 103/159 (64%), Gaps = 3/159 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
+ + T LY++RK V+EM+RD Y+V D E+ ++ ++F EKY E+ K+EDL+I K K +
Sbjct: 7 DRQSTHLYQVRKKVLEMMRDLDYVVADNELTLTNEQFCEKYREDPKQEDLMILKPKSSNN 66
Query: 284 SDQIYVLFPE---EVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKF 454
++ P+ + +VG+ ++T RMK ENV RA+ V Q +T SK +I A K+
Sbjct: 67 AEH----GPKTGGKGRVGLKTIKTCKKRMKRENVPRAVFVVQQHITPLSKQYISRKAQKY 122
Query: 455 HLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYT 571
HLE+F E E LVN+ + LVP H++LT EK TLLERYT
Sbjct: 123 HLEVFLEPEFLVNITECYLVPLHEILTPEEKNTLLERYT 161
[76][TOP]
>UniRef100_C5KB88 DNA-directed RNA polymerases II 24 kDa polypeptide, putative n=1
Tax=Perkinsus marinus ATCC 50983 RepID=C5KB88_9ALVE
Length = 213
Score = 132 bits (331), Expect = 2e-29
Identities = 69/155 (44%), Positives = 105/155 (67%), Gaps = 5/155 (3%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRE----DLVINKAKKNKPS 286
RL+R+RKT+ E+L+DRGY+V +N +K+ F +++ E +R+ DL+I +K++ PS
Sbjct: 12 RLWRVRKTIFELLQDRGYVVAQKYLNETKESFAQQWNEIQERKGGRHDLIILVSKQDDPS 71
Query: 287 DQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
DQ+ V FP+E K VG+ +RT +M+ + + RAILV Q LT +K I E + + +E
Sbjct: 72 DQLIVFFPDENKRVGVKPIRTLALKMEEQRLSRAILVVQQPLTAFAKTAIQEASPQMEIE 131
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+F E+EL+VN+ H LVPEH+ LT EK+ LLERY
Sbjct: 132 VFNESELVVNITHHELVPEHKPLTPEEKRLLLERY 166
[77][TOP]
>UniRef100_B7FSY0 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7FSY0_PHATR
Length = 228
Score = 127 bits (319), Expect = 6e-28
Identities = 62/155 (40%), Positives = 100/155 (64%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E RL+R+ +T+ ML RGY+V ++ F+E++GE RE+L I K + ++
Sbjct: 29 EAARLFRVYRTIANMLDKRGYMVPKTLREITPSAFKERFGEYPSRENLTILVEKADDDTN 88
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
Q+++ FPE+ KVG+ ++ Y +RM++E+V AI++ + +T +K + EM+ F +E F
Sbjct: 89 QLFIFFPEDEKVGVKPIKVYTDRMRAESVSNAIIILRVDITPFAKQAVQEMSDSFRIEHF 148
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E+ELLV++ H LVP HQVLT EK LL+RY L
Sbjct: 149 KESELLVDITKHQLVPVHQVLTPNEKNELLKRYRL 183
[78][TOP]
>UniRef100_A7RT72 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RT72_NEMVE
Length = 207
Score = 124 bits (312), Expect = 4e-27
Identities = 66/157 (42%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKAKKNKP 283
+ +RIRKTVM++ G ++ D E++ + ++F+E++G+ R DL I A + P
Sbjct: 9 KFWRIRKTVMQVCN--GLILRD-ELDKTLEQFKEQFGDRPSEGRPSRSDLSILVAHNDDP 65
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K + +MA K+ LE
Sbjct: 66 TDQMFVFFPEEPKVGIKTIKQYCQRMQEENISRAVIVVQLGMTPSAKQALVDMAPKYILE 125
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
F EAEL++N+ +H LVPEH ++T EK+ LL RY L
Sbjct: 126 QFVEAELMINITEHELVPEHVLMTPDEKQELLLRYKL 162
[79][TOP]
>UniRef100_B0D9Y7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0D9Y7_LACBS
Length = 208
Score = 124 bits (310), Expect = 7e-27
Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Frame = +2
Query: 107 NEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGEN---MKREDLVINKAKKN 277
+E +L+++ +T+ E+++DRG+LV D E++M FR Y N + R L +
Sbjct: 5 DETAKLWKVNRTIHELVKDRGFLVSDDEIHMDLQRFRSLYANNSGVVDRNQLNFYTTSRT 64
Query: 278 KPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+DQI+V F EE VG+ +R + ++ +++ R I+V ++T ++ I MA ++
Sbjct: 65 NSTDQIFVFFSEEKSVGVKTMRKLLGILEEKSIQRGIIVFPGNMTPSARKVIVAMAQQYR 124
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
LE F EA+LLVN+ H LVP H VL+ EKKTLLE+Y L
Sbjct: 125 LEEFSEADLLVNIVHHTLVPRHDVLSPDEKKTLLEKYRL 163
[80][TOP]
>UniRef100_B5DLP1 GA22581 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5DLP1_DROPS
Length = 320
Score = 122 bits (307), Expect = 1e-26
Identities = 65/162 (40%), Positives = 98/162 (60%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E+ +L+ IRKT+ EM DRGYLV E++ + ++F E +G+ R DL + +
Sbjct: 4 EAEVYKLWHIRKTLFEMSHDRGYLVTSAELDQTVEQFTELFGDKPSEQSPMRSDLTMLLS 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P +++ V FPEE KV + ++ Y +RM+ E ++RAILV + LT +K I MA
Sbjct: 64 HADDPKNRMLVFFPEEPKVAVKTIKAYAHRMEGEGIHRAILVVRDCLTPPAKQSIMAMAP 123
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +E F E+EL +NV H LVP+H VL++ EKK L Y L
Sbjct: 124 LYIMEQFLESELTINVTKHELVPQHVVLSEVEKKQLFRCYRL 165
[81][TOP]
>UniRef100_Q9FJL8 RNA polymerase I, II and III 24.3 kDa subunit-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FJL8_ARATH
Length = 210
Score = 122 bits (305), Expect = 3e-26
Identities = 57/161 (35%), Positives = 108/161 (67%), Gaps = 4/161 (2%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKR---EDLVINKAKK 274
++E+TR++++R+TV++MLRDRGY + + ++N+ ++EF +++ + M + E L ++ K
Sbjct: 5 DDEITRIFKVRRTVLQMLRDRGYTIEESDLNLKREEFVQRFCKTMNKVNKEALFVSANKG 64
Query: 275 NKPSDQIYVLFPEEVKVGIHVLRTYIN-RMKSENVYRAILVCQSSLTTQSKNFIFEMASK 451
P+D+IYV +PE KVG+ V++ + +M+ + V+R I+V ++T ++ + E+
Sbjct: 65 PNPADKIYVFYPEGPKVGVPVIKKEVAIKMRDDKVHRGIVVVPMAITAPARMAVSELNKM 124
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E+F+EAEL+ N+ +H LV ++ VL D KK LL YT+
Sbjct: 125 LTIEVFEEAELVTNITEHKLVNKYYVLDDQAKKKLLNTYTV 165
[82][TOP]
>UniRef100_B5XGU7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Salmo salar RepID=B5XGU7_SALSA
Length = 159
Score = 118 bits (296), Expect = 3e-25
Identities = 57/139 (41%), Positives = 90/139 (64%), Gaps = 5/139 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
+ E RL++IRKT+M++ DRGYLV E++ + DEF+ ++G+ +R DL + A
Sbjct: 4 DEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA +V Q +T +K + +MA
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRACIVVQMGMTPSAKQSLVDMAP 123
Query: 449 KFHLEIFQEAELLVNVKDH 505
K+ LE F + ELL+N+ +H
Sbjct: 124 KYILEQFLQQELLINITEH 142
[83][TOP]
>UniRef100_Q5KN51 DNA-directed RNA polymerases ii 24 kDa polypeptide, putative n=1
Tax=Filobasidiella neoformans RepID=Q5KN51_CRYNE
Length = 221
Score = 117 bits (292), Expect = 8e-25
Identities = 58/172 (33%), Positives = 101/172 (58%), Gaps = 14/172 (8%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYG--------------ENM 238
+ E+ RL+R+ +TV EM+RDRGYL+ D+E+N+S +EF++++G ++
Sbjct: 5 ANRELARLWRVSRTVHEMVRDRGYLLADYEINVSFEEFKDRHGATGSVEWMKCPQADKSS 64
Query: 239 KREDLVINKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQ 418
R ++ + +N +D+I+V F + V ++T+I M R I++ ++
Sbjct: 65 SRSNMSFDAIHENDNTDKIFVYFCADKNVSKASMKTFIGSMDKMGARRGIIIWSEKMSPA 124
Query: 419 SKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+K + EM S++HLE F E++LLVN+ H LVP+H V+ EK L++RY L
Sbjct: 125 AKKTLQEMQSEYHLEDFPESDLLVNITKHFLVPKHTVMKPEEKSALIKRYRL 176
[84][TOP]
>UniRef100_Q54EH2 DNA-directed RNA polymerases I, II, and III subunit rpabc1 n=1
Tax=Dictyostelium discoideum RepID=RPAB1_DICDI
Length = 197
Score = 116 bits (291), Expect = 1e-24
Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 2/157 (1%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
++ RL +IRKTV++ML DR Y++ +E ++ F + RE+L + KK+ P+D
Sbjct: 3 DINRLLQIRKTVLQMLSDREYIITAYEQEYPRESF-------VSRENLTMYCVKKDDPTD 55
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI--FEMASKFHLE 463
IYV FP+ KVG+ ++ Y++ MK RAI+V Q ++T +K + F K LE
Sbjct: 56 SIYVFFPDTPKVGVTQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLE 115
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
F EAELLVN+ H LVP+H +LT EK LL RY +
Sbjct: 116 QFNEAELLVNITHHQLVPKHILLTKEEKLELLTRYKM 152
[85][TOP]
>UniRef100_B6KFE7 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
putative n=3 Tax=Toxoplasma gondii RepID=B6KFE7_TOXGO
Length = 205
Score = 114 bits (286), Expect = 4e-24
Identities = 64/157 (40%), Positives = 97/157 (61%), Gaps = 2/157 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGEN-MKREDLVINKAKKNK 280
E+ RL+R RKT +ML+DRGY+V E N S ++F +++ EN R +++ + K
Sbjct: 2 EDSTRRLFRARKTCCDMLQDRGYIVSAQEKNESWNDFLQRFKENECNRSRMLLIASHKVD 61
Query: 281 PSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
P +++ V F +E K G+ +R RM+ N+ RAILV Q+ LT +++ I E A +
Sbjct: 62 PDNRVIVYFADETKKTGVKPIRELTERMEERNIQRAILVTQNVLTAFARDAISEAAPRHI 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E F E+ELLVN+ H LVP+H LT+ EK+ LL RY
Sbjct: 122 IENFMESELLVNITKHELVPKHVPLTNDEKQNLLNRY 158
[86][TOP]
>UniRef100_A8QAC6 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8QAC6_MALGO
Length = 159
Score = 112 bits (279), Expect = 3e-23
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 2/156 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGEN--MKREDLVINKAKKN 277
+ E RL+R+ +T+ E++ DRGY V + E+N+ D F+ + N + R + K+
Sbjct: 4 DRETARLWRVNRTIHELVADRGYEVSEEELNVDLDTFKAEVTSNGIVDRNRMNFFTQHKD 63
Query: 278 KPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
KP ++++V + E VG+ +R +IN ++ +N+ R I++ +T+ +K I M +
Sbjct: 64 KPEERLFVFYSTERNVGVKTMRQFINILEEKNITRGIIIWSDKMTSAAKKVIEAMRLQLV 123
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
LE F+EA LLVN+ H LVP+H+VLT EKK LL R
Sbjct: 124 LEDFEEAFLLVNITHHQLVPKHEVLTPDEKKELLHR 159
[87][TOP]
>UniRef100_A5K2Q3 DNA-directed RNA polymerase II 23 kDa polypeptide, putative n=1
Tax=Plasmodium vivax RepID=A5K2Q3_PLAVI
Length = 205
Score = 111 bits (278), Expect = 3e-23
Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 2/159 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNK 280
E+ +TR Y+ RKT EML DRGY++ E + F+E++ EN K R + I + KN
Sbjct: 2 EDPITRFYKCRKTCCEMLEDRGYIITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61
Query: 281 PSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+++I V F +E+K G+ LR +M +++ RAILV Q++LT +++ I E A +
Sbjct: 62 ANNKIIVYFADEIKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAIKEAAPRHI 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E F + ELLVN+ H LVP H LT EK+ LL+RY +
Sbjct: 122 IENFLDTELLVNITKHELVPRHIPLTSDEKRNLLQRYKI 160
[88][TOP]
>UniRef100_Q8ID59 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8ID59_PLAF7
Length = 205
Score = 111 bits (277), Expect = 5e-23
Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGEN-MKREDLVINKAKKNK 280
E+ +TR Y+ RKT EML DRGY++ E + F+E + +N +R + I+ KN
Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIMTPREKLENFSTFKEMFEDNDRQRSKMGISTTHKND 61
Query: 281 PSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+++I V F +EVK G+ LR RM+ +++ RAILV Q+ LT +++ I E A +
Sbjct: 62 SNNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAIKEAAPRHI 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E F + ELLVN+ H LVP H LT EKK LL+RY +
Sbjct: 122 IENFLDTELLVNITKHELVPRHIPLTSDEKKNLLQRYKI 160
[89][TOP]
>UniRef100_B3L6X3 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium knowlesi
strain H RepID=B3L6X3_PLAKH
Length = 205
Score = 111 bits (277), Expect = 5e-23
Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNK 280
E+ +TR Y+ RKT EML DRGY++ E + F+E++ EN K R + I + KN
Sbjct: 2 EDPITRFYKCRKTCCEMLEDRGYVITPREKLENFATFKEQFEENEKLRSRMTIITSHKND 61
Query: 281 PSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
S++I V F +E K G+ LR +M +++ RAILV Q++LT +++ I E A +
Sbjct: 62 ESNKIIVYFADETKKTGVKPLRELTEKMDEKSIQRAILVTQNTLTPFARDAIKEAAPRHI 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E F + ELLVN+ H LVP H LT EK+ LL+RY +
Sbjct: 122 IENFLDTELLVNITKHELVPRHIPLTSDEKRNLLQRYKI 160
[90][TOP]
>UniRef100_Q9LUR5 RNA polymerase-like protein n=1 Tax=Arabidopsis thaliana
RepID=Q9LUR5_ARATH
Length = 178
Score = 110 bits (274), Expect = 1e-22
Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK 271
M + E+ RL+ +++T+M+ML+DRGYL+ E+ M+ +EF EKYG+NMKR L+++K +
Sbjct: 1 MALMDEEIKRLFLVQRTLMQMLKDRGYLIDGSEITMTLEEFIEKYGDNMKRSLLLLSKLR 60
Query: 272 KNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQ--SSLTTQSKNFIFEMA 445
K + T I RAILV Q + + Q+ F+ +
Sbjct: 61 K---------------------MMTMI---------RAILVVQDIKAFSRQALVFLGAVY 90
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
FH+E+FQE EL+VNVK+HV VPEHQ LT EK+ LER
Sbjct: 91 PIFHIEVFQEKELIVNVKEHVFVPEHQALTTEEKQKFLER 130
[91][TOP]
>UniRef100_B0EA74 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
putative n=1 Tax=Entamoeba dispar SAW760
RepID=B0EA74_ENTDI
Length = 204
Score = 108 bits (271), Expect = 2e-22
Identities = 61/155 (39%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Frame = +2
Query: 113 MTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY---GENMKREDLVINKAKKNKP 283
+T +YR KTV+EMLRDRGY+ + + N + + F+E++ GE + ++L I K+N
Sbjct: 4 VTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKENDA 63
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
+D I V F E V + VL Y+ ++SE+V RAI+V + L++ K + E + E
Sbjct: 64 TDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVKQ-MMEQPREVKWE 122
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
E EL+VNV HVLVP+H +L+ EK+ LL++Y
Sbjct: 123 ALLEDELIVNVTHHVLVPQHILLSPEEKQELLKKY 157
[92][TOP]
>UniRef100_Q98RN7 RNA polymerase I, II and III 24.3 kDa subunit n=1 Tax=Guillardia
theta RepID=Q98RN7_GUITH
Length = 214
Score = 108 bits (270), Expect = 3e-22
Identities = 56/166 (33%), Positives = 104/166 (62%), Gaps = 9/166 (5%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDF--EVNMSKDEFREKYGEN--MKREDLVINKAK 271
+ + L+++R+TV++M+RDRGY+V D ++N+S+ F E Y +N + R+ L I + +
Sbjct: 4 DKNIQHLFKVRRTVLQMIRDRGYVVFDSKDDLNISRSSFEEFYMKNHAICRKSLEIKRPR 63
Query: 272 KNKPSDQIYVLFPE----EVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFE 439
+ P ++I ++F E ++ +G+ +R + R+K+E R +++ LT +K +
Sbjct: 64 WDNPENRILIVFVEGEKDKMNIGVKSIRLFCERIKNEGFSRVLMILNGKLTPHAKQAVSS 123
Query: 440 MASKFHL-EIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ S L E F E EL+VN+ H+LVP+H++L+ E K+LLERY++
Sbjct: 124 INSNNDLIEYFSENELIVNITHHMLVPKHEILSKNESKSLLERYSI 169
[93][TOP]
>UniRef100_C4LW54 RNA polymerase subunit Rpb5, putative n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4LW54_ENTHI
Length = 204
Score = 108 bits (270), Expect = 3e-22
Identities = 60/155 (38%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Frame = +2
Query: 113 MTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY---GENMKREDLVINKAKKNKP 283
+T +YR KTV+EMLRDRGY+ + + N + + F+E++ GE + ++L I K+N
Sbjct: 4 VTHIYRAWKTVLEMLRDRGYITSEEDHNTTLEGFKERFYKGGEGVDHKELTIKVVKENDA 63
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
+D I V F E V + VL Y+ ++SE+V RAI+V + L++ K + E + E
Sbjct: 64 TDGIIVFFAEGVSLKTDVLGKYLTEVESEHVKRAIIVYRGKLSSPVKQ-MMEQPREVKWE 122
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
E EL+VNV H+LVP+H +L+ EK+ LL++Y
Sbjct: 123 ALLEDELIVNVTHHILVPQHILLSPEEKQELLKKY 157
[94][TOP]
>UniRef100_B6AE06 DNA-directed RNA polymerase 2, putative n=1 Tax=Cryptosporidium
muris RN66 RepID=B6AE06_9CRYT
Length = 205
Score = 108 bits (269), Expect = 4e-22
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNK 280
+N TR +R R+T+ EML DRGY+V + + F+E++ + + R +++ + K
Sbjct: 2 DNSDTRFFRARRTLCEMLEDRGYIVSSQDKDEQFATFKERFESHQRLRSRMLMVASHKQD 61
Query: 281 PSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+ +I F +E K G+ +R + +M N+ RAIL+ Q+ LT +K I + A K +
Sbjct: 62 QTKRIICYFADESKKTGVKPIRDIVEKMDEHNIQRAILISQNVLTAHAKVAILDAAPKHY 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E F E ELLVN+ H LVP+H +L+D EK LLERY
Sbjct: 122 IESFLENELLVNITRHELVPKHVLLSDEEKSQLLERY 158
[95][TOP]
>UniRef100_B6JZQ6 DNA-directed RNA polymerase I n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JZQ6_SCHJY
Length = 211
Score = 107 bits (267), Expect = 7e-22
Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 5/162 (3%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY---GENMKREDLVINKAKK 274
E + +++R+ KTV +++ DRGY V E+ ++ D+FR + G N+ R L AK
Sbjct: 6 ERNIVKVFRVWKTVHQLVHDRGYAVSQSELELTLDQFRAMHCGMGRNLDRSTLSFY-AKP 64
Query: 275 NKPSDQ--IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMAS 448
SD+ IYV F +E VGI +RT+++ + N IL+ +++T + I +
Sbjct: 65 PPGSDKGTIYVEFAKEPSVGIKEMRTFVHTLGDHNHKTGILIYANNMTPSATKIISTVTG 124
Query: 449 KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+F +E FQE++L+VN+ H LVP+H +LT EKK LL+RY L
Sbjct: 125 QFTIETFQESDLIVNITHHELVPKHVLLTPEEKKELLDRYKL 166
[96][TOP]
>UniRef100_B4FEX9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FEX9_MAIZE
Length = 127
Score = 107 bits (266), Expect = 9e-22
Identities = 50/79 (63%), Positives = 64/79 (81%)
Frame = +2
Query: 338 LRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVP 517
++ Y+ M ENV RA+LV Q +LT +K+F+ E+ K HLEIFQEAE+L+N+K+HVLVP
Sbjct: 4 IKKYVEMMTHENVSRAVLVLQQNLTPFAKSFLIELEPKIHLEIFQEAEMLINIKEHVLVP 63
Query: 518 EHQVLTDTEKKTLLERYTL 574
EHQVLT+ EKKTLLERYTL
Sbjct: 64 EHQVLTNEEKKTLLERYTL 82
[97][TOP]
>UniRef100_Q4P7S7 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P7S7_USTMA
Length = 554
Score = 105 bits (263), Expect = 2e-21
Identities = 53/157 (33%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY---GENMKREDLVINKAKK 274
+ E RL+R+ +T+ E++RDRGY V D E+++ + F+ +Y G ++ R L
Sbjct: 4 DRETVRLWRVNRTIHELVRDRGYQVADDEISVDLETFKAEYAPTGGSVDRNKLNFFTEHG 63
Query: 275 NKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKF 454
+ +++V + + VG+ +R +I+ M+ ++ R I++ +T+ ++ I M F
Sbjct: 64 EHENQRLFVFYSSDRNVGVKTMRQFISIMEERDIQRGIIIWPEKMTSAARKVIDAMRGTF 123
Query: 455 HLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
HLE F+EA LLVN+ H LVP+H+ L EKK LL+R
Sbjct: 124 HLEDFEEAFLLVNITHHHLVPKHEPLYPEEKKELLQR 160
[98][TOP]
>UniRef100_A2ZBC5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZBC5_ORYSI
Length = 227
Score = 103 bits (258), Expect = 7e-21
Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
Frame = +2
Query: 71 VPEGCATMVFSEN-EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRE 247
VPE A+M+ + E RL+ R+T MEMLRDRGY V + E+ + EFR + E E
Sbjct: 15 VPECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTPPEFRAWWAEKPGIE 74
Query: 248 DLVINKAKKNKPSDQIYVLF--PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQS 421
L + PS ++ ++F PE VK+ +R + K EN+ R +L+ QS + +++
Sbjct: 75 RLAFTTTLVSDPSKKVQLVFCPPEPVKIA--TIREIYLQTKEENLSRLVLILQSKILSRA 132
Query: 422 KNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ I E+ KF ++IFQ +LLVN+ HVL P+H+VL+ +K LL+ Y +
Sbjct: 133 REAIKEI-FKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNV 182
[99][TOP]
>UniRef100_Q2RAP1 Os11g0143400 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q2RAP1_ORYSJ
Length = 227
Score = 103 bits (257), Expect = 9e-21
Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
Frame = +2
Query: 71 VPEGCATMVFSEN-EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRE 247
VPE A+M+ + E RL+ R+T MEMLRDRGY V + E+ + EFR + E E
Sbjct: 15 VPECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIE 74
Query: 248 DLVINKAKKNKPSDQIYVLF--PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQS 421
L + PS ++ ++F PE VK+ +R + K EN+ R +L+ QS + +++
Sbjct: 75 RLAFTTTLVSDPSKKVQLVFCPPEPVKIA--TIREIYLQTKEENLSRLVLILQSKILSRA 132
Query: 422 KNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ I E+ KF ++IFQ +LLVN+ HVL P+H+VL+ +K LL+ Y +
Sbjct: 133 REAIKEI-FKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNV 182
[100][TOP]
>UniRef100_Q2QXY2 RNA polymerase Rpb5, N-terminal domain containing protein,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q2QXY2_ORYSJ
Length = 335
Score = 103 bits (257), Expect = 9e-21
Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
Frame = +2
Query: 71 VPEGCATMVFSEN-EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRE 247
VPE A+M+ + E RL+ R+T MEMLRDRGY V + E+ + EFR + E E
Sbjct: 123 VPECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIE 182
Query: 248 DLVINKAKKNKPSDQIYVLF--PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQS 421
L + PS ++ ++F PE VK+ +R + K EN+ R +L+ QS + +++
Sbjct: 183 RLAFTTTLVSDPSKKVQLVFCPPEPVKIA--TIREIYLQTKEENLSRLVLILQSKILSRA 240
Query: 422 KNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ I E+ KF ++IFQ +LLVN+ HVL P+H+VL+ +K LL+ Y +
Sbjct: 241 REAIKEI-FKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNV 290
[101][TOP]
>UniRef100_Q0IQ77 Os12g0139500 protein n=2 Tax=Oryza sativa RepID=Q0IQ77_ORYSJ
Length = 227
Score = 103 bits (257), Expect = 9e-21
Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 3/171 (1%)
Frame = +2
Query: 71 VPEGCATMVFSEN-EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRE 247
VPE A+M+ + E RL+ R+T MEMLRDRGY V + E+ + EFR + E E
Sbjct: 15 VPECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIE 74
Query: 248 DLVINKAKKNKPSDQIYVLF--PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQS 421
L + PS ++ ++F PE VK+ +R + K EN+ R +L+ QS + +++
Sbjct: 75 RLAFTTTLVSDPSKKVQLVFCPPEPVKIA--TIREIYLQTKEENLSRLVLILQSKILSRA 132
Query: 422 KNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ I E+ KF ++IFQ +LLVN+ HVL P+H+VL+ +K LL+ Y +
Sbjct: 133 REAIKEI-FKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNV 182
[102][TOP]
>UniRef100_C5LN15 DNA-directed RNA polymerases II 24 kDa polypeptide, putative
(Fragment) n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LN15_9ALVE
Length = 168
Score = 103 bits (257), Expect = 9e-21
Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 5/131 (3%)
Frame = +2
Query: 191 VNMSKDEFREKYGENMKRE----DLVINKAKKNKPSDQIYVLFPEEVK-VGIHVLRTYIN 355
+N +K+ F +++ E +R+ DL+I +K++ PSDQ+ V FP+E K VG+ +RT
Sbjct: 2 LNETKESFAQQWNEIQERKGGRHDLIILVSKQDDPSDQLIVFFPDENKRVGVKPIRTLAL 61
Query: 356 RMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLT 535
+M+ + + RAILV Q LT +K I E + + +E+F E+EL+VN+ H LVPEH+ LT
Sbjct: 62 KMEEQRLSRAILVVQQPLTAFAKTAIQEASPQMEIEVFNESELVVNITHHELVPEHKPLT 121
Query: 536 DTEKKTLLERY 568
EK+ LLERY
Sbjct: 122 AEEKRLLLERY 132
[103][TOP]
>UniRef100_A7APR4 RNA polymerase Rpb5, N-terminal domain containing protein n=1
Tax=Babesia bovis RepID=A7APR4_BABBO
Length = 205
Score = 102 bits (255), Expect = 2e-20
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYG--ENMKREDLVINKAKKN 277
++E RL+R R+T EML DRGY + + E + EF+ +Y + ++ + L++ K +
Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPNQERLETFAEFKARYELYDRVRSKMLLVASLKTD 61
Query: 278 KPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
K + + E K G+ +R +M+ +++RAILV Q+ LT +K+ I E A +
Sbjct: 62 KDAKLLVYFADETKKTGVKPIRELTEKMEDHDIHRAILVTQNVLTPFAKDAILEAAPRNI 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E F E ELLVN+ H LVP+H LT EK+TLL+RY
Sbjct: 122 IENFLETELLVNITKHELVPKHIPLTADEKQTLLQRY 158
[104][TOP]
>UniRef100_A9UR01 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR01_MONBE
Length = 210
Score = 102 bits (254), Expect = 2e-20
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
E E RLY++ T+ +M DRG+ V +NM+ D + E YGE R++L K +
Sbjct: 4 EAERYRLYKVWITLKQMCHDRGFRVTQEMMNMTFDTWNEIYGE-YPRKELSFPVQKVDDD 62
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK---F 454
+D ++V FPE V + +++ +R+KS+N+ RAI+V Q + +K+ I + + +
Sbjct: 63 NDGLFVFFPESPDVKVAAIKSLYDRLKSDNLRRAIIVYQRKVAPVAKSHIDILLKEDPPY 122
Query: 455 HLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E F EAEL+ NV H LVP H++L ++EK+ LLERY
Sbjct: 123 IVETFAEAELVYNVTRHHLVPHHEILKESEKQQLLERY 160
[105][TOP]
>UniRef100_Q09191 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Schizosaccharomyces pombe RepID=RPAB1_SCHPO
Length = 210
Score = 102 bits (254), Expect = 2e-20
Identities = 58/166 (34%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
Frame = +2
Query: 92 MVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY---GENMKREDLVIN 262
M E + R++R KT +++ DRGY V E++++ D+F+ + G N+ R L
Sbjct: 1 MSAEEKNIVRVFRAWKTAHQLVHDRGYGVSQAELDLTLDQFKAMHCGMGRNLDRTTLSFY 60
Query: 263 KAKKNKPSDQ--IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
AK + S++ IY+ F +E VGI +RT+++ + N IL+ +S+T + I
Sbjct: 61 -AKPSNDSNKGTIYIEFAKEPSVGIKEMRTFVHTLGDHNHKTGILIYANSMTPSAAKIIA 119
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +F +E FQE++L+VN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 120 TVTGQFTIETFQESDLIVNITHHELVPKHILLSPDEKKELLDRYKL 165
[106][TOP]
>UniRef100_UPI00004E3EE0 RNA polymerase II core subunit n=1 Tax=Dictyostelium discoideum AX4
RepID=UPI00004E3EE0
Length = 181
Score = 101 bits (252), Expect = 4e-20
Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Frame = +2
Query: 152 MLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQIYVLFPEEVKVGI 331
ML DR Y++ +E ++ F + RE+L + KK+ P+D IYV FP+ KVG+
Sbjct: 1 MLSDREYIITAYEQEYPRESF-------VSRENLTMYCVKKDDPTDSIYVFFPDTPKVGV 53
Query: 332 HVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI--FEMASKFHLEIFQEAELLVNVKDH 505
++ Y++ MK RAI+V Q ++T +K + F K LE F EAELLVN+ H
Sbjct: 54 TQIKKYVDIMKDRQANRAIIVVQQNITPFAKQALAEFSQEKKITLEQFNEAELLVNITHH 113
Query: 506 VLVPEHQVLTDTEKKTLLERYTL 574
LVP+H +LT EK LL RY +
Sbjct: 114 QLVPKHILLTKEEKLELLTRYKM 136
[107][TOP]
>UniRef100_Q9ZVB9 Putative DNA-directed RNA polymerase 23kD subunit n=1
Tax=Arabidopsis thaliana RepID=Q9ZVB9_ARATH
Length = 218
Score = 101 bits (252), Expect = 4e-20
Identities = 63/159 (39%), Positives = 97/159 (61%), Gaps = 1/159 (0%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S E + Y R+T MEMLRDRGY V D ++N+S +FR YGE+ + L I+ +
Sbjct: 17 SSVECHKYYLARRTTMEMLRDRGYDVSDEDINLSLQQFRALYGEHPDVDLLRISAKHRFD 76
Query: 281 PSDQIYVLFPEEVKVGIHVLRTY-INRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
S +I V+F V ++ +R + + EN+ ILV QS +T Q+ + E+ S F
Sbjct: 77 SSKKISVVFCGTGIVKVNAMRVIAADVLSRENITGLILVLQSHITNQALKAV-ELFS-FK 134
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E+F+ +LLVNV HVL P+HQVL D EK++LL+++++
Sbjct: 135 VELFEITDLLVNVSKHVLRPKHQVLNDKEKESLLKKFSI 173
[108][TOP]
>UniRef100_A3GI06 DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase
II subunit 5) n=1 Tax=Pichia stipitis RepID=A3GI06_PICST
Length = 213
Score = 101 bits (251), Expect = 5e-20
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
+ ++RL+R KTV EM+RDRGY + EV+MS DEFR K ++M R + + N
Sbjct: 4 DRTVSRLFRSFKTVKEMVRDRGYYITQEEVDMSLDEFRAKICDSMGRPQRKLMCFQANPT 63
Query: 284 SDQI---------YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
++ + +V F +E VGI +R + + +N I + Q+S+T S N +
Sbjct: 64 AESLDKFPDLGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQNSITP-SANKLI 122
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S +E FQE +L+VN+ H LVP+H L+ EKK LL+RY L
Sbjct: 123 PTVSPASIETFQEGDLVVNITHHELVPKHIKLSRDEKKELLDRYRL 168
[109][TOP]
>UniRef100_A7QJL2 Chromosome chr8 scaffold_106, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QJL2_VITVI
Length = 229
Score = 100 bits (250), Expect = 6e-20
Identities = 61/158 (38%), Positives = 98/158 (62%), Gaps = 3/158 (1%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y R+T++EMLRDRGY + ++++S +FR Y + + L I+ A ++ PS
Sbjct: 31 ESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLRISAALRSDPSK 90
Query: 290 QIYVLF--PEEVKV-GIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHL 460
+I V+F P+ VKV I + T I + +++ + ILV Q+ +T+Q+ + + F +
Sbjct: 91 KILVIFCGPDVVKVNAIRSIATQI--VNKDSLSKLILVLQNHITSQALKAVDLFS--FQV 146
Query: 461 EIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
E FQ +LLVN+ HVL P+H+VLTD EK LL++Y+L
Sbjct: 147 EKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSL 184
[110][TOP]
>UniRef100_Q6CJ62 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Kluyveromyces lactis RepID=RPAB1_KLULA
Length = 215
Score = 100 bits (250), Expect = 6e-20
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
E ++RL+R KTV EM+RDRGY + E+++S ++F+ KY ++M + + + N
Sbjct: 6 ERNISRLWRAFKTVKEMVRDRGYFITQEEIDLSLEDFKAKYCDSMGKPQRKMMSFQSNPT 65
Query: 284 SDQI---------YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
+ I +V F +E VG+ ++ ++ + +N I + QS +T S N I
Sbjct: 66 EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITP-SANKIL 124
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
A+ +E F EA L+VN+ H LVP+H L++ EKK LL+RY L
Sbjct: 125 PTAAPAVIETFPEASLVVNITHHELVPKHIRLSEAEKKELLKRYRL 170
[111][TOP]
>UniRef100_A2Q2Z5 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal n=1
Tax=Medicago truncatula RepID=A2Q2Z5_MEDTR
Length = 248
Score = 100 bits (248), Expect = 1e-19
Identities = 57/156 (36%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y R+TV+EML+DRGY + E+ +S D+FR+ +G++ + L + PS
Sbjct: 50 ESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRLRLTATHATNPSK 109
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKS-ENVYRAILVCQSSLTTQSKNFIFEMASKFHLEI 466
+I V+F V ++ +R ++ + E++ IL+ Q+ +T+Q+ + ++ F +EI
Sbjct: 110 RILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKAVNLLS--FKVEI 167
Query: 467 FQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
FQ +LLVN HVL P+HQVLTD +KK LL++Y +
Sbjct: 168 FQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDI 203
[112][TOP]
>UniRef100_Q9P4B9 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Kluyveromyces marxianus RepID=RPAB1_KLUMA
Length = 215
Score = 100 bits (248), Expect = 1e-19
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 9/166 (5%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKP 283
E ++RL+R +TV EM+RDRGY + E+++S ++F+ KY ++M + + + N
Sbjct: 6 ERGISRLWRAFRTVKEMVRDRGYFITQEEIDLSLEDFKVKYCDSMGKPQRKMMSFQSNPT 65
Query: 284 SDQI---------YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
+ I +V F +E VG+ ++ ++ + +N I + QS +T S N I
Sbjct: 66 EESIEKFPEMGSLWVEFCDEASVGVKTMKNFVVHITEKNFQTGIFIYQSGITP-SANKIL 124
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
A+ +E F EA L+VN+ H LVP+H L+D EKK LL+RY L
Sbjct: 125 PTAAPAVIETFPEASLVVNITHHELVPKHIRLSDAEKKELLKRYRL 170
[113][TOP]
>UniRef100_B9ST46 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9ST46_RICCO
Length = 238
Score = 99.8 bits (247), Expect = 1e-19
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +2
Query: 107 NEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPS 286
+E R Y R+TV+EMLRDRGY V E+++S EFR +G N + L + + PS
Sbjct: 39 HETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLKFSATHTSDPS 98
Query: 287 DQIYVLFPEEVKVGIHVLRTYINR-MKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
++ VLF + + +R + + +++ ILV Q+ +T Q+ + KF +E
Sbjct: 99 KRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAV--DLFKFKVE 156
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+FQ +LLVN+ HVL P+HQVLTD EK+ LL+ Y +
Sbjct: 157 MFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCI 193
[114][TOP]
>UniRef100_C5DNB3 KLTH0G15598p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DNB3_LACTC
Length = 215
Score = 99.8 bits (247), Expect = 1e-19
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
+E ++RL+R KTV EM+RDRGY + EV++S ++F+ KY ++M R + + N
Sbjct: 5 NERNVSRLWRAFKTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64
Query: 281 PSD---------QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+ ++V F +E VGI ++ ++ + +N I V Q+ +T + +
Sbjct: 65 VEEALEKFPNMGSLWVEFCDEASVGIKTMKNFVIHISEKNFQTGIFVYQNGVTPSAMKLL 124
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+A +E F EA L+VN+ H LVP+H L+D EKK LL RY L
Sbjct: 125 PSVAPA-TIETFHEASLVVNITHHELVPKHIKLSDEEKKELLRRYRL 170
[115][TOP]
>UniRef100_Q4N141 DNA-directed RNA polymerase II, putative n=1 Tax=Theileria parva
RepID=Q4N141_THEPA
Length = 205
Score = 99.4 bits (246), Expect = 2e-19
Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 2/157 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNK 280
++E RL+R R+T EML DRGY + E + EF+ +Y + K R +++ +++
Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPVQEKLETFAEFKARYEMHEKVRSKMLLVASQRTA 61
Query: 281 PSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+++ V F +E K G+ +R RM+ +++RAILV Q+ LT +K+ I E K
Sbjct: 62 SENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAIMEAYPKNI 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E F E ELLVN+ H LVP+H LT EK+ LL++Y
Sbjct: 122 IENFMETELLVNITKHELVPKHIPLTMEEKQNLLQKY 158
[116][TOP]
>UniRef100_A9BK88 Rpabc5 n=1 Tax=Cryptophyta RepID=A9BK88_9CRYP
Length = 216
Score = 99.4 bits (246), Expect = 2e-19
Identities = 54/164 (32%), Positives = 102/164 (62%), Gaps = 9/164 (5%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLV--GDFEVNMSKDEFREKYGENMK--REDLVINKAKKN 277
E+ L++IR+T+++MLRDR Y+V ++ MS+ F +K+ +N + R +L IN++K
Sbjct: 7 EILNLFKIRRTILQMLRDRSYVVFENQDDLEMSRSSFEQKFVKNFQVIRSELEINRSKWL 66
Query: 278 KPSDQIYVLFPEEVK----VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMA 445
+ + +I V+F E K +G+ +R + R+K + +I+V LT+ +K I +
Sbjct: 67 EENMRILVVFIEGEKEKSAIGVKSIRGFCERIKQDGFQNSIIVLHGKLTSHAKQAINSIN 126
Query: 446 S-KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S +E F E+EL+VN+ +H LVP+H+++++ E + L +RY++
Sbjct: 127 SLDDKIEYFSESELIVNITEHNLVPKHEIISEEEARCLFKRYSI 170
[117][TOP]
>UniRef100_B9IHS9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IHS9_POPTR
Length = 216
Score = 99.0 bits (245), Expect = 2e-19
Identities = 61/157 (38%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y R+TV+EML+DRGY V E+++S +FR YG+N E L + K+ PS
Sbjct: 18 ESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNPDIELLKFSATHKSDPSK 77
Query: 290 QIYVLF--PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
++ V+F VKVG+ L T + +++ ILV Q+++T Q+ + KF +E
Sbjct: 78 RMLVIFCGLGVVKVGMIRLIT-VQITDRDSLTGLILVLQNNITNQAMKAL--DLFKFKIE 134
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
IFQ +LLVN+ H+L P+HQVL++ K+ LL++Y++
Sbjct: 135 IFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSI 171
[118][TOP]
>UniRef100_Q5CNJ4 DNA-directed RNA polymerase 2 n=2 Tax=Cryptosporidium
RepID=Q5CNJ4_CRYHO
Length = 205
Score = 99.0 bits (245), Expect = 2e-19
Identities = 54/154 (35%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNKPSDQI 295
R +R R+T+ EML DRGY+V + F+E++ + + R +++ + + + +I
Sbjct: 7 RFFRARRTLCEMLEDRGYIVSSQDKEEDFSTFKERFESHQRLRSRMLMVASHRQDQTKRI 66
Query: 296 YVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQ 472
F +E K G+ +R + +M + RAIL+ Q+ LT +K I + A K ++E F
Sbjct: 67 ICYFADESKKTGVKPIRDIVEKMDEHAIQRAILISQNVLTAHAKVAILDAAPKHYIESFL 126
Query: 473 EAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
E ELLVN+ H LVP+H +L+D EK LL+RY +
Sbjct: 127 ENELLVNITKHELVPKHILLSDDEKLQLLDRYKI 160
[119][TOP]
>UniRef100_Q9M1J2 Putative uncharacterized protein F24I3.160 n=1 Tax=Arabidopsis
thaliana RepID=Q9M1J2_ARATH
Length = 222
Score = 98.6 bits (244), Expect = 3e-19
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S E R Y R+ ++MLRDRGY V D ++N+S +FR YGE + L I+ ++
Sbjct: 21 SSEESHRYYLARRNGLQMLRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSD 80
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYI-NRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+ ++ ++F V ++ +R+ + + + E + ILV Q+ +T Q+ I E+ S F
Sbjct: 81 STKKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAI-ELFS-FK 138
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+EIFQ +LLVN+ H L P+HQVL D EK TLL+++++
Sbjct: 139 VEIFQITDLLVNITKHSLKPQHQVLNDEEKTTLLKKFSI 177
[120][TOP]
>UniRef100_Q4U8E3 DNA-directed RNA polymerase, subunit (RPB5 homologue), putative n=1
Tax=Theileria annulata RepID=Q4U8E3_THEAN
Length = 205
Score = 97.8 bits (242), Expect = 5e-19
Identities = 59/157 (37%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNK 280
++E RL+R R+T EML DRGY + E + EF+ +Y K R +++ + +
Sbjct: 2 DDEEGRLFRCRRTCCEMLEDRGYFIPSQEKLETFAEFKARYEMYDKVRSKMLLVASLRTA 61
Query: 281 PSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+++ V F +E K G+ +R RM+ +++RAILV Q+ LT +K+ I E K
Sbjct: 62 AENKLLVYFADEKKKTGVKPIRELTERMEDHDIHRAILVTQNVLTPFAKDAIMEAYPKNI 121
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+E F E ELLVN+ H LVP+H LT EK+ LL++Y
Sbjct: 122 IENFMETELLVNITKHELVPKHIPLTMEEKQNLLQKY 158
[121][TOP]
>UniRef100_C5Y4H1 Putative uncharacterized protein Sb05g002600 n=1 Tax=Sorghum
bicolor RepID=C5Y4H1_SORBI
Length = 263
Score = 97.4 bits (241), Expect = 7e-19
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E RL+ R+T +EMLRDRGY V + E+ + EFR + + + E L + + PS
Sbjct: 65 ESKRLFLARRTALEMLRDRGYAVPEDELARTLPEFRAWWEDKPELERLAFSTTLASDPSS 124
Query: 290 QIYVLF--PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
++ V+F PE VK+ +R +K EN+ R IL+ Q + ++++ I E+ + ++
Sbjct: 125 KVKVVFCPPEPVKIA--AIRVVYTGVKDENLSRLILILQGRIMSKAREAIKEI-FPYKVD 181
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
FQ ELLVN+ H L P+HQVLT EK LL+ Y +
Sbjct: 182 TFQITELLVNITKHALKPKHQVLTAEEKAKLLKEYNV 218
[122][TOP]
>UniRef100_C5MBX4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
tropicalis MYA-3404 RepID=C5MBX4_CANTT
Length = 214
Score = 97.4 bits (241), Expect = 7e-19
Identities = 57/167 (34%), Positives = 95/167 (56%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM---KREDLVINKAK 271
++ ++RL+R KTV EM+RDRGY + E++M+ +EFR K ++M +R+ +
Sbjct: 4 TDRSISRLFRTFKTVKEMVRDRGYYISQEEIDMTLEEFRSKICDSMGNPQRKQMCFQAQP 63
Query: 272 KNKPSDQ------IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+ ++ ++V F +E VGI +R + + +N + + Q+S+T S N +
Sbjct: 64 TGETLEKFPELGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGLFIYQNSITP-SANKL 122
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S +EIFQE++L+VN+ H LVP+H L+ EK LLERY L
Sbjct: 123 IPTVSPSVIEIFQESDLIVNITHHELVPKHLKLSKDEKVELLERYRL 169
[123][TOP]
>UniRef100_C4YG42 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Candida
albicans RepID=C4YG42_CANAL
Length = 214
Score = 97.4 bits (241), Expect = 7e-19
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM---KREDLVINKA- 268
++ ++RL+R KTV EM+RDRGY + E++M+ +EFR K ++M +R+ +
Sbjct: 4 TDRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATP 63
Query: 269 -----KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+K + ++V F +E VGI +R + + +N I + Q+S+T S N +
Sbjct: 64 TAETLEKFPETGSLWVEFCDEASVGIKTMRNFCIHITEKNFSTGIFIYQNSMTP-SANKL 122
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S +EIFQE +L+VN+ H LVP+H L EKK LL RY L
Sbjct: 123 IPTVSPATIEIFQENDLIVNITHHELVPKHLKLNREEKKELLTRYRL 169
[124][TOP]
>UniRef100_Q8L947 Putative DNA-directed RNA polymerase 23kD subunit n=1
Tax=Arabidopsis thaliana RepID=Q8L947_ARATH
Length = 222
Score = 97.1 bits (240), Expect = 9e-19
Identities = 57/159 (35%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S E R Y R+ +++LRDRGY V D ++N+S +FR YGE + L I+ ++
Sbjct: 21 SSEESHRYYLARRNGLQILRDRGYEVSDEDINLSLHDFRTVYGERPDVDRLRISALHRSD 80
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYI-NRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
+ ++ ++F V ++ +R+ + + + E + ILV Q+ +T Q+ I E+ S F
Sbjct: 81 STKKVKIVFFGTSMVKVNAIRSVVADILSQETITGLILVLQNHVTNQALKAI-ELFS-FK 138
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+EIFQ +LLVN+ H L P+HQVL D EK TLL+++++
Sbjct: 139 VEIFQITDLLVNITKHSLKPQHQVLNDEEKTTLLKKFSI 177
[125][TOP]
>UniRef100_B9W9S0 DNA-directed RNA polymerases I, II and III subunit, putative n=1
Tax=Candida dubliniensis CD36 RepID=B9W9S0_CANDC
Length = 214
Score = 97.1 bits (240), Expect = 9e-19
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM---KREDLVINKA- 268
++ ++RL+R KTV EM+RDRGY + E++M+ +EFR K ++M +R+ +
Sbjct: 4 TDRAVSRLFRSFKTVKEMVRDRGYYISQEELDMTLEEFRSKICDSMGTPQRKQMCFQATP 63
Query: 269 -----KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+K + ++V F +E VGI +R + + +N I + Q+S+T S N +
Sbjct: 64 TGETLEKFPETGSLWVEFCDESSVGIKTMRNFCIHITEKNFSTGIFIYQNSMTP-SANKL 122
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S +EIFQE +L+VN+ H LVP+H L EKK LL RY L
Sbjct: 123 IPTVSPATIEIFQENDLIVNITHHELVPKHLKLNHEEKKELLTRYRL 169
[126][TOP]
>UniRef100_UPI000194DF40 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194DF40
Length = 119
Score = 96.7 bits (239), Expect = 1e-18
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 5/112 (4%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSK 424
+ P+DQ++V FPEE KVGI ++ Y RM+ EN+ RA++V Q +T +K
Sbjct: 64 HNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAK 115
[127][TOP]
>UniRef100_Q2HW77 RNA polymerase subunit, RPB5; RNA polymerase Rpb5, N-terminal n=1
Tax=Medicago truncatula RepID=Q2HW77_MEDTR
Length = 224
Score = 96.7 bits (239), Expect = 1e-18
Identities = 59/159 (37%), Positives = 95/159 (59%), Gaps = 3/159 (1%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S E R + RKT+M+ML DRGY V + ++ +S EFR ++GE K L ++ + ++
Sbjct: 23 SNIETIRYFECRKTLMDMLHDRGYNVSESDLTLSLSEFRSRFGEFPKPHTLGVSVSLRSN 82
Query: 281 PSDQIYVLFP---EEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK 451
PS ++ V+FP + K + V+++ I + E + R ILV QS +T+ ++ +
Sbjct: 83 PSIKVQVVFPGTDDIRKSNLIVIQSQI--VDKERLSRLILVMQSKMTSYARKELEN--CP 138
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
F +EI Q +LLVNV HVL P+++VLT EK+ LL +Y
Sbjct: 139 FKVEIIQLNDLLVNVTKHVLQPKYEVLTANEKQKLLNKY 177
[128][TOP]
>UniRef100_Q6BIJ0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Debaryomyces hansenii RepID=RPAB1_DEBHA
Length = 214
Score = 96.7 bits (239), Expect = 1e-18
Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK--REDLVINKAKK 274
++ ++RL+R KTV EM+RDRGY + E++MS EFR + ++M + L+ +A
Sbjct: 4 TDRTISRLWRSFKTVKEMVRDRGYYITQEEIDMSLAEFRSRICDSMNVPQRKLMCFQANP 63
Query: 275 NKPS-------DQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
S ++V F +E VGI +R + + +N I + QSS+T S N +
Sbjct: 64 TAESLEKFPDLGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQSSITP-SANKL 122
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S +E FQE +L+VN+ H LVP+H L EKK LLERY L
Sbjct: 123 IPTVSPASIETFQEGDLVVNITHHDLVPKHIKLARDEKKELLERYRL 169
[129][TOP]
>UniRef100_A7TEH4 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TEH4_VANPO
Length = 215
Score = 96.3 bits (238), Expect = 2e-18
Identities = 52/167 (31%), Positives = 94/167 (56%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
SE ++RL+R +TV EM+RDRGY + E+++S ++F+ KY ++M R + + N
Sbjct: 5 SERSISRLWRTFRTVKEMVRDRGYFIAQEEIDLSLEDFKAKYCDSMGRPQRKMMSFQANP 64
Query: 281 PSD---------QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+ ++V F +E VG+ ++ ++ ++ +N I V Q+++T + +
Sbjct: 65 TEETMEKFPTMSSLWVEFCDEPSVGVKTMKNFVIHIQEKNYQTGIFVYQTNVTPSAMKLV 124
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +E F EA L+VN+ H LVP+H L++ EKK LL++Y L
Sbjct: 125 PSIPPA-TIETFHEASLIVNITHHELVPKHIRLSENEKKELLKKYRL 170
[130][TOP]
>UniRef100_Q757H7 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Eremothecium gossypii RepID=RPAB1_ASHGO
Length = 215
Score = 96.3 bits (238), Expect = 2e-18
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVI------- 259
+E ++RL+R +TV EM+RDRGY + EV++S ++F+ KY ++M R +
Sbjct: 5 NERNVSRLWRAFRTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSFQSNP 64
Query: 260 --NKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
KK+ ++V F +E VGI ++ ++ + +N I + Q+ +T + +
Sbjct: 65 TEETLKKSPNMGSVWVEFCDEPSVGIKTMKNFVIHIGEKNFQTGIFIYQNGITPSALKLL 124
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+A +E F E L+VN+ H LVP+H L+D EKK LL+RY L
Sbjct: 125 PSVAPA-TIETFNETALVVNITHHELVPKHIKLSDEEKKELLKRYRL 170
[131][TOP]
>UniRef100_B7T1F2 RNA polymerase II (Fragment) n=1 Tax=Oreochromis niloticus
RepID=B7T1F2_ORENI
Length = 108
Score = 94.7 bits (234), Expect = 4e-18
Identities = 45/107 (42%), Positives = 71/107 (66%), Gaps = 5/107 (4%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKAKKNKP 283
RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A + P
Sbjct: 1 RLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKSQFGDKPSEGRPRRTDLTVLVAHNDDP 60
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSK 424
+DQ++V FPEE KVGI ++ Y RM+ EN+ RAI+V Q +T +K
Sbjct: 61 TDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAK 107
[132][TOP]
>UniRef100_B6TJI5 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
RepID=B6TJI5_MAIZE
Length = 264
Score = 94.7 bits (234), Expect = 4e-18
Identities = 56/155 (36%), Positives = 86/155 (55%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E RL+ R+T +EMLRDRGY V + E+ + EFR + + E L + + PS
Sbjct: 66 ESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLASDPSS 125
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
++ V+F V I +R +K EN+ R IL+ Q + + ++ I E+ +F ++ F
Sbjct: 126 KVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEI-FRFKVDTF 184
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q ELLVN+ HVL P+H+VLT K LL+ Y +
Sbjct: 185 QITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNV 219
[133][TOP]
>UniRef100_B4FYH9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FYH9_MAIZE
Length = 248
Score = 94.7 bits (234), Expect = 4e-18
Identities = 56/155 (36%), Positives = 86/155 (55%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E RL+ R+T +EMLRDRGY V + E+ + EFR + + E L + + PS
Sbjct: 50 ESHRLFLARRTALEMLRDRGYAVPEEELARTLPEFRAWWEYRPELERLAFSTTLTSDPSS 109
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
++ V+F V I +R +K EN+ R IL+ Q + + ++ I E+ +F ++ F
Sbjct: 110 KVKVVFCPPGPVKIAAIRLIYTEVKDENLSRLILILQGKIMSTTRESIKEI-FRFKVDTF 168
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q ELLVN+ HVL P+H+VLT K LL+ Y +
Sbjct: 169 QITELLVNITKHVLKPKHEVLTAEGKAKLLKEYNV 203
[134][TOP]
>UniRef100_B7Q5X9 RNA polymerase, 25-kDa subunit, putative n=1 Tax=Ixodes scapularis
RepID=B7Q5X9_IXOSC
Length = 91
Score = 94.4 bits (233), Expect = 6e-18
Identities = 45/91 (49%), Positives = 63/91 (69%)
Frame = +2
Query: 293 IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQ 472
++V FP+E K+GI ++TY RM+ EN+ RAI+V Q +T +K + +MA K+ LE F
Sbjct: 1 MFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQQGMTPSAKQALGDMAPKYILEHFL 60
Query: 473 EAELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
E+ELL+N+ +H LVPEH VLT EK LL R
Sbjct: 61 ESELLINITEHELVPEHVVLTPEEKAELLAR 91
[135][TOP]
>UniRef100_A2QAL5 Catalytic activity: Nucleoside triphosphate + RNA(n) =
Pyrophosphate + RNA(n+1) n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2QAL5_ASPNC
Length = 235
Score = 94.4 bits (233), Expect = 6e-18
Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 24/187 (12%)
Frame = +2
Query: 86 ATMVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINK 265
A V ++ EMTRL+R +TV EML DRGY V + EV M EF++KY + + D NK
Sbjct: 7 AGSVDADREMTRLWRTWRTVFEMLLDRGYEVTEDEVQMPLHEFKQKYSDPLGYPDR--NK 64
Query: 266 AK------------------KNKPSDQ-----IYVLF-PEEVKVGIHVLRTYINRMKSEN 373
K K+ P+ Q IYV F P+ VG +RT+ + + N
Sbjct: 65 MKISARPTEAMQAKYTPLPSKSNPNPQPDCGTIYVEFCPDSTGVGTKQVRTFNHFVDENN 124
Query: 374 VYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKT 553
+ + + Q+ ++ + + M + E FQE +LLVN+ H LVP+H +L+ EK
Sbjct: 125 FHTGVFITQTPISPSAVRLLSSMPGRI-CEHFQEQDLLVNITRHELVPKHVLLSPDEKAR 183
Query: 554 LLERYTL 574
LLERY L
Sbjct: 184 LLERYRL 190
[136][TOP]
>UniRef100_UPI0001985D3D PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985D3D
Length = 1260
Score = 93.2 bits (230), Expect = 1e-17
Identities = 54/155 (34%), Positives = 85/155 (54%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y R+T+ +ML DRGY V E+ S +FR +G N L I + PS
Sbjct: 24 ESYRYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSK 83
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
+I V+F ++ V+R ++ E ++R ILV QS + + ++ + E K +E F
Sbjct: 84 KILVVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIK--VEFF 141
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q ELL+N+ HV VP+H++L+ EK+ L+ +Y L
Sbjct: 142 QITELLINITKHVSVPKHEILSAQEKRKLVNKYKL 176
[137][TOP]
>UniRef100_A7Q5P2 Chromosome undetermined scaffold_53, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7Q5P2_VITVI
Length = 221
Score = 93.2 bits (230), Expect = 1e-17
Identities = 54/155 (34%), Positives = 85/155 (54%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y R+T+ +ML DRGY V E+ S +FR +G N L I + PS
Sbjct: 24 ESYRYYLSRRTLFQMLSDRGYNVPHSELTRSLSDFRASFGHNPDPSRLRICLPLISSPSK 83
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
+I V+F ++ V+R ++ E ++R ILV QS + + ++ + E K +E F
Sbjct: 84 KILVVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIK--VEFF 141
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q ELL+N+ HV VP+H++L+ EK+ L+ +Y L
Sbjct: 142 QITELLINITKHVSVPKHEILSAQEKRKLVNKYKL 176
[138][TOP]
>UniRef100_C5DR69 ZYRO0B06006p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DR69_ZYGRC
Length = 215
Score = 93.2 bits (230), Expect = 1e-17
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
+E ++RL+R KTV EM++DRGY + E+ + ++F+ KY ++M R + + N
Sbjct: 5 NERNISRLWRTFKTVKEMVKDRGYFIAQEEIELPLEDFKAKYCDSMGRPQRKMMSFQSNP 64
Query: 281 PSDQI---------YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+ I +V F +E VG+ ++T++ ++ +N I V Q+++T + +
Sbjct: 65 TEESIAKFPSMGSLWVEFCDEPTVGVKTMKTFVIHIQEKNFQTGIFVYQNNVTPSAMKLV 124
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +E F EA L+VN+ H LVP+H ++ EK+ LL+RY L
Sbjct: 125 PSIPPA-TIETFHEASLVVNITHHELVPKHIRFSEDEKRELLKRYRL 170
[139][TOP]
>UniRef100_A6R8U3 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Ajellomyces capsulatus NAm1 RepID=A6R8U3_AJECN
Length = 236
Score = 92.4 bits (228), Expect = 2e-17
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 24/182 (13%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK--- 271
++ EMTRL+R +TV EML DRGY V + E+ +S DEFR +Y + + D NK K
Sbjct: 13 ADREMTRLWRTWRTVFEMLADRGYEVTEEEIKISLDEFRTRYSDALGFPDR--NKMKISA 70
Query: 272 ---------------KNKPS-----DQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAI 388
+KP+ IYV F +++ VG +R + + + +N + I
Sbjct: 71 RPSQTMMDKYTPLPTASKPNPVPECGTIYVEFCADMQSVGTKQIRAFNHFIDEQNYHTGI 130
Query: 389 LVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
V Q+ ++ + + + +F E FQE ELLVN+ H LVP+H +L+ EKK LL+RY
Sbjct: 131 FVSQTPISPSAMRVLNSIPGRF-CEHFQEQELLVNITHHELVPKHVLLSAEEKKRLLQRY 189
Query: 569 TL 574
L
Sbjct: 190 RL 191
[140][TOP]
>UniRef100_P20434 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=5
Tax=Saccharomyces cerevisiae RepID=RPAB1_YEAST
Length = 215
Score = 92.4 bits (228), Expect = 2e-17
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
+E ++RL+R +TV EM++DRGY + EV + ++F+ KY ++M R + + N
Sbjct: 5 NERNISRLWRAFRTVKEMVKDRGYFITQEEVELPLEDFKAKYCDSMGRPQRKMMSFQANP 64
Query: 281 PSDQI---------YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+ I +V F +E VG+ ++T++ ++ +N I V Q+++T + +
Sbjct: 65 TEESISKFPDMGSLWVEFCDEPSVGVKTMKTFVIHIQEKNFQTGIFVYQNNITPSAMKLV 124
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +E F EA L+VN+ H LVP+H L+ EK+ LL+RY L
Sbjct: 125 PSIPPA-TIETFNEAALVVNITHHELVPKHIRLSSDEKRELLKRYRL 170
[141][TOP]
>UniRef100_Q9LKX4 RPB5d n=1 Tax=Brassica napus RepID=Q9LKX4_BRANA
Length = 223
Score = 91.7 bits (226), Expect = 4e-17
Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 1/151 (0%)
Frame = +2
Query: 125 YRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQIYVL 304
Y R+T MEMLRDRGY + + ++N++ EFR YG+ + L I+ + S +I V+
Sbjct: 29 YLARRTTMEMLRDRGYDISNEDINLTLQEFRALYGDRPNVDRLRISAQHCSDSSKKIAVV 88
Query: 305 FPEEVKVGIHVLRTY-INRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAE 481
F V + +R + + EN+ ILV QS +T Q+ + E+ S F +E+FQ E
Sbjct: 89 FCGSGIVKVSAIRDIAADVLGRENLTGLILVLQSDITNQALKAV-ELFS-FKVELFQLTE 146
Query: 482 LLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
LLVN+ HVL P+H VL + EK++L +++++
Sbjct: 147 LLVNITKHVLRPKHHVLNEQEKESLFKKFSI 177
[142][TOP]
>UniRef100_B9RGC5 DNA-directed RNA polymerase II, putative n=1 Tax=Ricinus communis
RepID=B9RGC5_RICCO
Length = 239
Score = 91.7 bits (226), Expect = 4e-17
Identities = 56/155 (36%), Positives = 92/155 (59%), Gaps = 1/155 (0%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y RKTVMEMLRDRGY V D E+ S EF ++G+N L I+ + + P
Sbjct: 41 ESQRYYLSRKTVMEMLRDRGYDVADSELTGSFTEFLSEFGDNPDILKLRISASLHSHPDK 100
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKS-ENVYRAILVCQSSLTTQSKNFIFEMASKFHLEI 466
++ V+F ++ + +R + ++K+ E++ IL+ QS + ++ + + SK +EI
Sbjct: 101 KMVVVFMGTEEIKLANIRGLLCQIKNKESLNGLILILQSKMNHYARKELGQFPSK--VEI 158
Query: 467 FQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYT 571
F ++LLVN+ HVL P H+VLT +K+ LL +++
Sbjct: 159 FHISDLLVNITKHVLKPRHEVLTAEQKQQLLNKFS 193
[143][TOP]
>UniRef100_C4R3P8 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and
III n=1 Tax=Pichia pastoris GS115 RepID=C4R3P8_PICPG
Length = 214
Score = 91.3 bits (225), Expect = 5e-17
Identities = 59/163 (36%), Positives = 92/163 (56%), Gaps = 9/163 (5%)
Frame = +2
Query: 113 MTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-----KREDLVINKAKK- 274
++RL+R +TV EM DRGY + E++ S +EFR K ++M K + N +
Sbjct: 8 ISRLWRSFRTVKEMAADRGYFISQEEMDQSLEEFRSKICDSMGNPQRKLMSFLANPTPEA 67
Query: 275 -NKPSD--QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMA 445
K SD ++V F +E VGI +R + R++ +N I + Q+++T S N +
Sbjct: 68 LEKYSDLGTLWVEFCDEPSVGIKTMRNFCLRIQEKNFSTGIFIYQNNITP-SANKMIPTV 126
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S +E FQE++L+VN+ H LVP+H L+D EK LL+RY L
Sbjct: 127 SPAIIETFQESDLVVNITHHELVPKHIRLSDGEKSQLLQRYKL 169
[144][TOP]
>UniRef100_C0NL28 RNA polymerase subunit n=2 Tax=Ajellomyces capsulatus
RepID=C0NL28_AJECG
Length = 236
Score = 90.5 bits (223), Expect = 8e-17
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 24/182 (13%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK--- 271
++ EMTRL+R +TV EML DRGY V + E+ + DEFR +Y + + D NK K
Sbjct: 13 ADREMTRLWRTWRTVFEMLADRGYEVTEEEIKIPLDEFRTRYSDALGFPDR--NKMKISA 70
Query: 272 ---------------KNKPS-----DQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAI 388
+KP+ IYV F +++ VG +R + + + +N + I
Sbjct: 71 RPSQTMMDKYTPLPTASKPNPVPECGTIYVEFCADMQSVGTKQIRAFNHFIDEQNYHTGI 130
Query: 389 LVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
V Q+ ++ + + + +F E FQE ELLVN+ H LVP+H +L+ EKK LL+RY
Sbjct: 131 FVSQTPISPSAMRVLNSIPGRF-CEHFQEQELLVNITHHELVPKHVLLSAEEKKRLLQRY 189
Query: 569 TL 574
L
Sbjct: 190 RL 191
[145][TOP]
>UniRef100_C5G7M7 DNA-directed RNA polymerase II polypeptide n=2 Tax=Ajellomyces
dermatitidis RepID=C5G7M7_AJEDR
Length = 236
Score = 89.7 bits (221), Expect = 1e-16
Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 24/182 (13%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK-KN 277
++ EMTRL+R +TV EML DRGY V + E+ + DEFR +Y + + D NK K
Sbjct: 13 ADREMTRLWRTWRTVFEMLADRGYEVTEEEIKIPLDEFRTRYSDALGFPDR--NKMKISA 70
Query: 278 KPSD----------------------QIYVLF-PEEVKVGIHVLRTYINRMKSENVYRAI 388
+PS IYV F P+ VG +R + + + +N + I
Sbjct: 71 RPSQAMMDRYTPLPTTLKPNPVPECGTIYVEFCPDIHSVGTKQVRAFNHFIDEQNYHTGI 130
Query: 389 LVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+ Q+ ++ + + + +F E FQE ELLVN+ H LVP+H +L+ EKK LL+RY
Sbjct: 131 FISQTPISPSAIRVLNSIPGRF-CEHFQEQELLVNITHHELVPKHVLLSAEEKKRLLQRY 189
Query: 569 TL 574
L
Sbjct: 190 RL 191
[146][TOP]
>UniRef100_C6SXN9 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SXN9_SOYBN
Length = 237
Score = 88.6 bits (218), Expect = 3e-16
Identities = 55/170 (32%), Positives = 96/170 (56%), Gaps = 4/170 (2%)
Frame = +2
Query: 77 EGCATMVFSEN---EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRE 247
+GC + F +N E R Y R+T +EML+DRGY + E+++S +FR+ +G+ +
Sbjct: 26 KGCLSK-FVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPD 84
Query: 248 DLVINKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRA-ILVCQSSLTTQSK 424
L ++ S +I V+F V + +R ++ + + IL+ ++ +T+Q+
Sbjct: 85 RLRLSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQAL 144
Query: 425 NFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ + F +EIFQ +LLVN+ HVL P+HQVLTD +K LL++Y +
Sbjct: 145 KAVNLFS--FKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNI 192
[147][TOP]
>UniRef100_C1GUJ0 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb01 RepID=C1GUJ0_PARBA
Length = 236
Score = 88.6 bits (218), Expect = 3e-16
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDL--------- 253
++ EMT+L+R +TV EML DRGY V + E+ + DEFR +Y + + D
Sbjct: 13 ADREMTKLWRTWRTVFEMLADRGYEVTEEEIKIPLDEFRTRYSDALGFPDRNKMKISARP 72
Query: 254 ------------VINKAKKNKPSDQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILV 394
++K IYV F +++ VG +R + + + +N + I +
Sbjct: 73 SQAMMEKYTPLPTVSKPNPVPECGTIYVEFCADIQSVGTKQVRAFNHFIDEQNYHTGIFI 132
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q+ ++ + + + +F E FQE ELLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 133 SQTPISPSAMRVLNSIPGRF-CEHFQEQELLVNITHHELVPKHILLSAEEKKRLLQRYRL 191
[148][TOP]
>UniRef100_Q6FQA6 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Candida glabrata RepID=RPAB1_CANGA
Length = 215
Score = 88.2 bits (217), Expect = 4e-16
Identities = 48/167 (28%), Positives = 92/167 (55%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
++ ++RL+R +TV EM+RDRGY + E++++ ++F+ KY ++M R + + N
Sbjct: 5 NDRSISRLWRTFRTVKEMVRDRGYFIAQEELDLTLEDFKVKYCDSMGRAQRKMMSFQANP 64
Query: 281 PSDQ---------IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+ ++V F +E VG+ ++T++ ++ + I + Q+++T + +
Sbjct: 65 TEESMTKFPDMGTLWVEFCDEPSVGVKTMKTFVIHIQEKQFQTGIFIYQNNITPSAMKLV 124
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +E F EA L+VN+ H LVP+H L + EK LL+RY L
Sbjct: 125 PSIPPA-TIETFHEAALVVNITHHDLVPKHIRLNEEEKAELLKRYRL 170
[149][TOP]
>UniRef100_C5PAC2 DNA-directed RNA polymerase subunit, putative n=2 Tax=Coccidioides
RepID=C5PAC2_COCP7
Length = 236
Score = 87.8 bits (216), Expect = 5e-16
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 22/180 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGE------------NMKR 244
++ EMTRL+R +TV EML DRGY V + EVN+ EFR KY + + +
Sbjct: 13 ADREMTRLWRTWRTVFEMLLDRGYEVTEEEVNVPLAEFRTKYSDALGFPDRNKMRISARP 72
Query: 245 EDLVINK----AKKNKPS-----DQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILV 394
+I K A KP+ IYV F + + VG +R + + + +N + I +
Sbjct: 73 SQTMIEKYTPLASPAKPNPVPECGTIYVEFCADAQGVGTKQVRAFNHFVDEQNYHTGIFI 132
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
QS ++ + + + +F E F E ELLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 133 TQSPISPSAIRLLTGIPGRF-CEHFLEQELLVNITHHELVPKHVLLSAEEKKRLLQRYRL 191
[150][TOP]
>UniRef100_C4JYC4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JYC4_UNCRE
Length = 239
Score = 87.8 bits (216), Expect = 5e-16
Identities = 63/183 (34%), Positives = 94/183 (51%), Gaps = 25/183 (13%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-------------- 238
+ EMTRL+R KTV EML DRGY V + EV +S ++FR KY + +
Sbjct: 13 ANREMTRLWRTWKTVFEMLLDRGYEVTEEEVKISLNDFRSKYADTLGFPDAPSRNKMRIS 72
Query: 239 -KREDLVINK-------AKKNKPSD--QIYVLFPEEVK-VGIHVLRTYINRMKSENVYRA 385
+ +I K AK N ++ IYV F + + VG +R + + + +N +
Sbjct: 73 ARPSQAMIEKYTPLPSPAKPNPVAECGTIYVEFCADAQGVGTKQVRAFNHFVDEQNYHTG 132
Query: 386 ILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
I + QS ++ + + + +F E F E ELLVN+ H LVP+H +L+ EKK LL R
Sbjct: 133 IFITQSPISPSAVRLLTGIPGRF-CEHFLEQELLVNITHHELVPKHLLLSAEEKKRLLHR 191
Query: 566 YTL 574
Y L
Sbjct: 192 YRL 194
[151][TOP]
>UniRef100_B6HAG0 Pc16g12690 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HAG0_PENCW
Length = 234
Score = 87.8 bits (216), Expect = 5e-16
Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYG----------------- 229
+E EMTRL+R +TV E+L DRGY V D E+ + ++FR KY
Sbjct: 11 AEREMTRLWRTFRTVYELLADRGYEVSDNELLLPLEDFRAKYSDPLGYPDRTKMKIQARP 70
Query: 230 -ENMKREDLVI-NKAKKNKPSD--QIYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILV 394
E MK + + +KA N D IYV F P+ VG +R + + + N + I +
Sbjct: 71 TETMKMKYTALPSKANPNPQPDCGTIYVDFCPDSSGVGTKQVRAFNHLVDENNFHTGIFI 130
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q+ ++ + + + + E FQE +LLVN+ H LVP+H +L+ EK LLERY L
Sbjct: 131 TQTPISPSAVRLLSGVPGRI-CEHFQEQDLLVNITRHELVPKHVLLSPEEKAKLLERYRL 189
[152][TOP]
>UniRef100_A6SPK6 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6SPK6_BOTFB
Length = 242
Score = 87.4 bits (215), Expect = 7e-16
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 24/181 (13%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKRED----------- 250
+ E +L+R +TV EM++DRGYL+ + EVNMS D F+ K+ N D
Sbjct: 16 DREAAKLWRCYRTVHEMVQDRGYLLAEEEVNMSFDTFKSKFTSNDGSVDRRQMNFSATPS 75
Query: 251 -------LVINKAKKNKPSDQ------IYVLFPEEVKVGIHVLRTYINRMKSENVYRAIL 391
V A+ P+ I L +V +GI +RT+ + N IL
Sbjct: 76 EAMIARYAVAPTAENPNPTTSEIGTIWIEFLMVTDVSIGIKQMRTFAQHLSQHNFSAGIL 135
Query: 392 VCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYT 571
+ + + ++ I +AS+ +E F E +LLVN+ H LVP+H +L+ E+ LL RY
Sbjct: 136 IAPVAPSGPAQKIIPAVASETRIETFVEQDLLVNITHHELVPKHVLLSREERAKLLSRYR 195
Query: 572 L 574
L
Sbjct: 196 L 196
[153][TOP]
>UniRef100_Q6CA26 DNA-directed RNA polymerases I, II, and III subunit RPABC1 n=1
Tax=Yarrowia lipolytica RepID=RPAB1_YARLI
Length = 212
Score = 87.4 bits (215), Expect = 7e-16
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 9/167 (5%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY----GENMKREDLVI--- 259
S ++ +L+++ +T E+++DRGY + D EVN+S D+F + G+ +K++ +
Sbjct: 2 SSDDAQKLWKVYRTAKELVKDRGYTITDKEVNLSFDQFVSEMCDPMGKPIKKKMCFMASP 61
Query: 260 --NKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFI 433
+K I+V F EE V + +R + + ILV ++++T + I
Sbjct: 62 SPEAIEKFPEMGNIWVEFCEEASVTVKTMRNFCIHISENKFATGILVYENNMTPSANRLI 121
Query: 434 FEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+A ++ FQE +LLVN+ HVLVP H L+ EKK LLERY L
Sbjct: 122 PSVAPAT-IDTFQETDLLVNITKHVLVPTHIKLSGAEKKFLLERYRL 167
[154][TOP]
>UniRef100_C1FYH2 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb18 RepID=C1FYH2_PARBD
Length = 236
Score = 87.0 bits (214), Expect = 9e-16
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 24/182 (13%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
++ EMT+L+R +TV EML DRGY V + E+ + +EFR +Y + + D NK K +
Sbjct: 13 ADREMTKLWRTWRTVFEMLADRGYEVTEEEIKIPLEEFRTRYSDALGFPDR--NKMKISA 70
Query: 281 PSDQ-----------------------IYVLFPEEVK-VGIHVLRTYINRMKSENVYRAI 388
Q IYV F +++ VG +R + + + +N + I
Sbjct: 71 RPSQAMMEKYTPLPTVSKPNPVPECGTIYVEFCADIQSVGTKQVRAFNHFIDEQNYHTGI 130
Query: 389 LVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+ Q+ ++ + + + +F E FQE ELLVN+ H LVP+H +L+ EKK LL+RY
Sbjct: 131 FISQTPISPSAMRVLNSIPGRF-CEHFQEQELLVNITHHELVPKHILLSAEEKKRLLQRY 189
Query: 569 TL 574
L
Sbjct: 190 RL 191
[155][TOP]
>UniRef100_B9GM22 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GM22_POPTR
Length = 233
Score = 86.3 bits (212), Expect = 2e-15
Identities = 52/157 (33%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y R+TV+EML+DRGY V D E+N S EFR +G + + L + + ++ P
Sbjct: 35 ESYRYYISRRTVLEMLKDRGYDVLDSELNRSLTEFRSVFGNSPDLDSLRFSVSLRSIPHK 94
Query: 290 QIYVLF--PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLE 463
+ V+F +E+K ++ Y + E+++ IL+ QS + +K + + F +E
Sbjct: 95 KTLVMFLGTDEIKTA-NIRTVYGQILNKESLHGLILILQSKMNHFAKKELEKF--PFKVE 151
Query: 464 IFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+FQ +LLVN+ HVL P+ +LT +K+ ++ +Y L
Sbjct: 152 VFQITDLLVNITKHVLQPQMDILTAEQKQQVMNKYKL 188
[156][TOP]
>UniRef100_A7ECH0 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7ECH0_SCLS1
Length = 242
Score = 86.3 bits (212), Expect = 2e-15
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGEN-------------MKR 244
+ E +L+R +TV EM++DRGYL+ + EVNMS D F+ K+ N
Sbjct: 16 DREAAKLWRCYRTVHEMVQDRGYLLAEEEVNMSFDTFKAKFTSNDGSVDRRQMNFSATPS 75
Query: 245 EDLVINKAKKNKPSDQ-----------IYVLFPEEVKVGIHVLRTYINRMKSENVYRAIL 391
E ++ A P + + L +V +GI +RT+ + N IL
Sbjct: 76 EAMIAKYANAPTPQNPNPTTSEIGTIWVEFLMVTDVSIGIKQMRTFAQHLSQHNFSAGIL 135
Query: 392 VCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYT 571
+ + ++ I +AS +E F E +LLVN+ H LVP+H +L+ E+ LL RY
Sbjct: 136 IAPVPPSGPAQKIIPAVASDTRIETFVEQDLLVNITHHELVPKHVLLSKEERAKLLSRYR 195
Query: 572 L 574
L
Sbjct: 196 L 196
[157][TOP]
>UniRef100_A1D205 RNA polymerase subunit n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D205_NEOFI
Length = 234
Score = 85.9 bits (211), Expect = 2e-15
Identities = 58/180 (32%), Positives = 89/180 (49%), Gaps = 22/180 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKN- 277
++ EMTRL+R +TV EML DRGY V + E+ + DEFR+KY + + D K
Sbjct: 11 ADREMTRLWRTWRTVFEMLADRGYEVTEEEIQIPLDEFRQKYADPVGFPDRTKMKISARP 70
Query: 278 ---------------KPSDQ-----IYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILV 394
P Q IYV F + VG +R + + + N + + +
Sbjct: 71 TAAMQAKYTPLPTPANPDPQPDCGTIYVEFCADSTGVGTKQVRAFNHFVDENNFHTGVFI 130
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q+ ++ + + + + E FQE +LLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 131 TQTPISPSAVRLLSGIPGRI-CEHFQEQDLLVNITRHELVPKHVLLSPEEKKNLLQRYRL 189
[158][TOP]
>UniRef100_B2VUN9 DNA-directed RNA polymerases I n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2VUN9_PYRTR
Length = 235
Score = 85.5 bits (210), Expect = 3e-15
Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 30/184 (16%)
Frame = +2
Query: 113 MTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKN---KP 283
+ RL+R+ KT EM+ DRGY+V + ++NMS D+F KY RED ++++ N +P
Sbjct: 11 LMRLWRVWKTTKEMMNDRGYMVLEEDMNMSLDQFARKYA----REDGEPDRSRLNFSCQP 66
Query: 284 SDQ----------------------IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVC 397
S++ I+V F + VG+ LR Y+ + + + + I++
Sbjct: 67 SEEMLAKYTDAPTKKVPNPLPNIGTIWVEFNADENVGMKQLREYMAHLVNGSFHSGIMIT 126
Query: 398 QSSLTTQSKNFIFEMAS-----KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLE 562
+T + + S K +E+F E +LLVN+ H LVP+H +L+D EK+ LL+
Sbjct: 127 VKPMTGMAIRLLRGATSLSDGPKGGVEVFIEQDLLVNITKHELVPKHVLLSDEEKQQLLQ 186
Query: 563 RYTL 574
RY L
Sbjct: 187 RYRL 190
[159][TOP]
>UniRef100_C8VQY1 RNA polymerase subunit (AFU_orthologue; AFUA_1G14110) n=2
Tax=Emericella nidulans RepID=C8VQY1_EMENI
Length = 235
Score = 84.7 bits (208), Expect = 5e-15
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 22/180 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY-GEN--MKREDLVI---- 259
+E E R++R +TV EML+DRGY V + EV + DEF+ KY GE RE L I
Sbjct: 12 AERETIRVWRTWRTVFEMLQDRGYEVTEEEVKIDLDEFKRKYVGEKGYPSREKLKIQARP 71
Query: 260 NKAKKNK------PSDQ--------IYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILV 394
+A K K PS++ IY+ F P++ +G +RT+ + + N + I +
Sbjct: 72 TEAMKAKYTPLPTPSNRDPQPDCGTIYIEFCPDDSGIGTKQVRTFNHTVDEGNFHTGIFI 131
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
++ ++ + + + + E FQE +LLVN+ H LVP+H +L+ EK LL+RY L
Sbjct: 132 TKTPISPSAVRLLSGIPGRI-CEHFQEQDLLVNITRHELVPKHVLLSPEEKSKLLQRYRL 190
[160][TOP]
>UniRef100_B6QBA7 RNA polymerase subunit n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QBA7_PENMQ
Length = 236
Score = 84.7 bits (208), Expect = 5e-15
Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 23/181 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM---KREDLVIN--- 262
+ NEM RL+R +TV EMLRDRGY + + E+ + +F K+ ++ RE + I
Sbjct: 12 ARNEMARLWRTWRTVHEMLRDRGYEISEEELKIDLQDFTNKFSDSNGFPSRERMTIAAIP 71
Query: 263 ----KAK----KNKPSD--------QIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAIL 391
KAK K +P+D QI+V F E+ VG +R + + + N + I
Sbjct: 72 SEAMKAKYTPLKKRPTDPDPVPDCGQIFVQFCEDTTGVGAKQVRQFNHLVDEGNYHSGIF 131
Query: 392 VCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYT 571
+ +++++ + + A E FQE++LLVN+ H LVP+H +L+ EK LLERY
Sbjct: 132 ITRTAISPSAVRLL-NSAIGHICEHFQESDLLVNITHHELVPKHVLLSAEEKARLLERYR 190
Query: 572 L 574
L
Sbjct: 191 L 191
[161][TOP]
>UniRef100_B6SJT2 DNA-directed RNA polymerase II 23 kDa polypeptide n=1 Tax=Zea mays
RepID=B6SJT2_MAIZE
Length = 154
Score = 84.3 bits (207), Expect = 6e-15
Identities = 51/142 (35%), Positives = 77/142 (54%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E RL+ R+T +EML DRGY V + E+ + EFR + E L + PS
Sbjct: 9 ESHRLFLARRTALEMLXDRGYAVPEEELARTLPEFRAWXEYXPELERLAFXTTLTSDPSS 68
Query: 290 QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
++ V+F V I +R +K EN+ R IL+ Q + + ++ I E+ +F ++ F
Sbjct: 69 KVKVVFCPPGPVKIAAIRLIYTEVKDENLARLILILQGKIMSPTRESIKEI-FRFKVDTF 127
Query: 470 QEAELLVNVKDHVLVPEHQVLT 535
Q ELLVN+ HVL P+H+VLT
Sbjct: 128 QITELLVNITKHVLKPKHEVLT 149
[162][TOP]
>UniRef100_C4Y929 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y929_CLAL4
Length = 287
Score = 84.3 bits (207), Expect = 6e-15
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Frame = +2
Query: 122 LYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY---GENMKR-----EDLVINKAKKN 277
L IR + + D GY + D E+NM+ DEF+ K GE ++ A+K
Sbjct: 85 LQTIRTKIWKSSGDIGYYITDEEINMTLDEFKAKICPMGEAQRKLMCFQAQPTPEAAEKF 144
Query: 278 KPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFH 457
++V F +E VGI +R + + +N I + Q+S+T S N + S
Sbjct: 145 PEMGSLWVEFCDEASVGIKTMRNFCIHISEKNFSTGIFIYQTSITP-SANKLIPTVSPAT 203
Query: 458 LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E+FQE++L+VN+ H LVP+H L+ EKK LL+RY L
Sbjct: 204 IEVFQESDLVVNITHHELVPKHIRLSKPEKKELLDRYRL 242
[163][TOP]
>UniRef100_A1CP51 RNA polymerase subunit n=1 Tax=Aspergillus clavatus
RepID=A1CP51_ASPCL
Length = 234
Score = 83.2 bits (204), Expect = 1e-14
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKN- 277
++ EMTRL+R +TV EML DRGY V + E+ + +EFR KY + + D K
Sbjct: 11 ADREMTRLWRTWRTVFEMLADRGYEVTEEEIQIPLEEFRHKYSDAVGYPDRTKMKISARP 70
Query: 278 ---------------KPSDQ-----IYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILV 394
P Q IYV F + VG +R + + + N + + +
Sbjct: 71 TAAMQAKYTPLPTPANPDPQPDCGTIYVEFCADSSGVGTKQVRAFNHFVDENNFHTGVFI 130
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
Q+ ++ + + + + E FQE +LLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 131 TQTPISPSAVRLLSGIPGRI-CEHFQEQDLLVNITRHELVPKHVLLSPEEKKNLLQRYRL 189
[164][TOP]
>UniRef100_B2AZ24 Predicted CDS Pa_3_3870 n=1 Tax=Podospora anserina
RepID=B2AZ24_PODAN
Length = 235
Score = 82.8 bits (203), Expect = 2e-14
Identities = 53/179 (29%), Positives = 93/179 (51%), Gaps = 22/179 (12%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY--GENMKREDLVINKAKKN 277
+ E++RL+R +T+ EM+ DRGY + + E+ M DEF+ K+ G+ ++ A+ +
Sbjct: 12 DKEVSRLWRAWRTIHEMVADRGYELAEEEIKMPLDEFKRKFTNGDGSPNRSIMSFSARPS 71
Query: 278 K----------------PSDQ---IYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILVC 397
P+ + I+V F PE+ +GI V++ ++ + + ILV
Sbjct: 72 ASMIKKFTPPPTASNPDPAPECGTIWVEFCPEKTSIGISVMKKFVEHCANNSYKAGILVT 131
Query: 398 QSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+L+ Q++ + + +E F E +LLVN+ H LVP H +L+ EK LL+RY L
Sbjct: 132 AVALSAQARKVMTVTSQYTLIECFLEEDLLVNITHHELVPTHILLSREEKMALLKRYRL 190
[165][TOP]
>UniRef100_C9S900 DNA-directed RNA polymerases I n=1 Tax=Verticillium albo-atrum
VaMs.102 RepID=C9S900_9PEZI
Length = 231
Score = 81.6 bits (200), Expect = 4e-14
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 22/177 (12%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY-------------------GE 232
E+ R +R +TV EM DRGY + + E+ +S D FR +Y +
Sbjct: 10 EVVRAWRAWRTVHEMCADRGYELAESEIQISLDRFRHEYLAADGSVNRSKLTFSARPSSD 69
Query: 233 NMKREDLVINKAKKNKPSD--QIYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILVCQS 403
+ R + A N D IY+ F E+ +G+ LR ++ + + I+V S
Sbjct: 70 MLSRHTPAPSAANPNPDPDCGPIYIEFIAEQGSLGVQHLRRFVQHVLEGHFKAGIMVTSS 129
Query: 404 SLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
LT+ + + + S +E F E +LLVN+ H LVP+H +L+ EK LL+RY L
Sbjct: 130 PLTSAGRKQLLSLESFARIECFLEEDLLVNITHHELVPKHILLSTDEKAALLKRYRL 186
[166][TOP]
>UniRef100_C5FC74 DNA-directed RNA polymerase II polypeptide n=1 Tax=Microsporum
canis CBS 113480 RepID=C5FC74_NANOT
Length = 236
Score = 81.6 bits (200), Expect = 4e-14
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 24/182 (13%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAK--- 271
++ EM RL+R +TV E+L DRGY V + EV +S EFR +Y + + D NK +
Sbjct: 13 ADREMARLWRTWRTVFELLLDRGYEVTEEEVKISLGEFRRRYSDALGFPDR--NKMRISA 70
Query: 272 ---------------KNKPS-----DQIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAI 388
+KP+ I+V F E + VG +R + + +N + I
Sbjct: 71 RPSQAMMEKYTPLPTTSKPNTAPECGTIHVEFCSETQSVGTKHIRAFNQFIDQQNYHAGI 130
Query: 389 LVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+ QS ++ + + + +F E F E ELLVN+ H LVP+H +L+ EKK LL+RY
Sbjct: 131 FITQSPISPSAIRLLTAIPGRF-CEHFLEQELLVNITHHELVPKHILLSAEEKKKLLQRY 189
Query: 569 TL 574
L
Sbjct: 190 RL 191
[167][TOP]
>UniRef100_B8M3B9 RNA polymerase subunit n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M3B9_TALSN
Length = 236
Score = 81.6 bits (200), Expect = 4e-14
Identities = 61/181 (33%), Positives = 91/181 (50%), Gaps = 23/181 (12%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM---KREDLVIN--- 262
+ NEM RL+R +TV EMLRDRGY + + EV + +F K+G R + I
Sbjct: 12 ARNEMARLWRTWRTVHEMLRDRGYEMSEEEVKIDYQDFANKFGGEHGYPSRAKMTIAAMP 71
Query: 263 ----KAK----KNKPSDQ--------IYVLFPEEVK-VGIHVLRTYINRMKSENVYRAIL 391
KAK K + SD IYV F E+ VG +R + + + N + I
Sbjct: 72 SEAMKAKYTPLKKRVSDPDPVPDCGPIYVQFCEDTTGVGAKQVRAFNHLVDEGNYHSGIF 131
Query: 392 VCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYT 571
+ +++++ + + E FQE++LLVN+ H LVP+H +L+ EK LLERY
Sbjct: 132 ITRTAISPSAMRLLSSAVGHI-CEHFQESDLLVNITHHELVPKHVLLSAEEKARLLERYR 190
Query: 572 L 574
L
Sbjct: 191 L 191
[168][TOP]
>UniRef100_A2DNL3 RNA polymerase Rpb5, N-terminal domain containing protein n=1
Tax=Trichomonas vaginalis G3 RepID=A2DNL3_TRIVA
Length = 202
Score = 80.9 bits (198), Expect = 7e-14
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNK 280
S + + +RI T+ +M+RDRGY V + +S D+F + Y N +N+ N
Sbjct: 2 SSEKESMYFRIYHTINQMMRDRGYNVDPSRLEISHDKFNKVYSGNPHN----LNECYSNM 57
Query: 281 PSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQS--KNFIFEMASKF 454
++I F ++ ++T I M V RAI++ + T + +N +S
Sbjct: 58 EGERILTFFDLIERLDSKTIQTIIKNMDEAGVNRAIVIGPEGILTPTAARNLDNVRSSGK 117
Query: 455 HLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E F E+++N+ +H LVP+H+VLT+ EK+ +L+RY +
Sbjct: 118 TIEFFSFDEVIINITEHELVPKHEVLTEDEKQEVLKRYNV 157
[169][TOP]
>UniRef100_UPI0000163400 DNA binding / DNA-directed RNA polymerase n=1 Tax=Arabidopsis
thaliana RepID=UPI0000163400
Length = 87
Score = 79.7 bits (195), Expect = 1e-13
Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Frame = +2
Query: 338 LRTYINRMKSENVYRAILVCQS--SLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVL 511
++ YI+++KS NV+RAILV Q + + Q+ F+ + FH+E+FQE EL+VNVK+HV
Sbjct: 1 MKKYIDQLKSANVFRAILVVQDIKAFSRQALVFLGAVYPIFHIEVFQEKELIVNVKEHVF 60
Query: 512 VPEHQVLTDTEKKTLLER 565
VPEHQ LT EK+ LER
Sbjct: 61 VPEHQALTTEEKQKFLER 78
[170][TOP]
>UniRef100_Q7S8Z5 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Neurospora crassa RepID=Q7S8Z5_NEUCR
Length = 234
Score = 77.4 bits (189), Expect = 7e-13
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 26/184 (14%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKN- 277
+ E++RL+R +TV EM++DRGY + + EV +S + F+ +Y ED N+AK
Sbjct: 10 ASKEVSRLWRAWRTVHEMVQDRGYELAEDEVKISLERFKAEY----TNEDGTPNRAKLQF 65
Query: 278 --KPSDQIYVLFP-----------------------EEVKVGIHVLRTYINRMKSENVYR 382
+PS+ + F E+ +G+ V++ ++
Sbjct: 66 SARPSEAMIKKFTAPPTPSNPNPVPECGTIWVEFCTEKGSIGVSVMKKFVTHCSDNKFKA 125
Query: 383 AILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLE 562
I + L+ Q++ + + +E F E +LLVN+ H LVP+H +L+ EK LL+
Sbjct: 126 GIFITAVPLSAQARKVMSVTSQYTQVECFLEEDLLVNITHHELVPKHVLLSKEEKAALLK 185
Query: 563 RYTL 574
RY L
Sbjct: 186 RYRL 189
[171][TOP]
>UniRef100_Q9M1H8 RNA polymerase 24kDa subunit-like protein n=1 Tax=Arabidopsis
thaliana RepID=Q9M1H8_ARATH
Length = 233
Score = 77.0 bits (188), Expect = 9e-13
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 1/156 (0%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSD 289
E R Y R T EMLRDRGY V + E++++ EFR +GE + E L I ++ P
Sbjct: 35 ESKRFYLARTTAFEMLRDRGYEVNEAELSLTLSEFRSVFGEKPELERLRICVPLRSDPKK 94
Query: 290 QIYVLFPEEVKVGIHVLRT-YINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEI 466
+I V+F + + +R +I + ++ ILV QS + ++ + F +E
Sbjct: 95 KILVVFMGTEPITVKSVRALHIQISNNVGLHAMILVLQSKMNHFAQKAL--TTFPFTVET 152
Query: 467 FQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
F +LLVN+ H+ P+ ++L EK+ LL ++ L
Sbjct: 153 FPIEDLLVNITKHIQQPKIEILNKEEKEQLLRKHAL 188
[172][TOP]
>UniRef100_Q0UZB4 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UZB4_PHANO
Length = 277
Score = 75.1 bits (183), Expect = 4e-12
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 30/184 (16%)
Frame = +2
Query: 113 MTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKN---KP 283
+ R++R+ +T EM+ +RGY V D E+ MS + F +KY RED ++++ N P
Sbjct: 53 LIRMWRVWRTAKEMMYERGYNVLDEEMTMSLEAFADKYA----REDGEPDRSRLNFSSTP 108
Query: 284 SDQ----------------------IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVC 397
S++ I+ F + VG+ LR ++N + S + Y I+V
Sbjct: 109 SEEMLIKYTPMPTKKEPNPVPAIGTIWCEFNADEAVGLKQLRDFMNHLGSGSFYSGIMVT 168
Query: 398 QSSLTTQSKNFIFEMAS-----KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLE 562
+T + + ++ K +E+F E +LLVN+ H LVP+H +L+ EK LL
Sbjct: 169 VKPITGMAIRLLRGASNLSDGPKGGIEVFVEQDLLVNITKHELVPKHVLLSAEEKAQLLT 228
Query: 563 RYTL 574
RY L
Sbjct: 229 RYRL 232
[173][TOP]
>UniRef100_C4VBP1 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4VBP1_NOSCE
Length = 204
Score = 75.1 bits (183), Expect = 4e-12
Identities = 48/149 (32%), Positives = 83/149 (55%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQIY 298
+ + R T++EM +RGY D +V +S D F ++ + ++ IN KN + +
Sbjct: 7 KFFLCRNTLVEMCTERGYTT-DQKV-LSYDNFIAQF-PSCDKDVNSINFVCKNA-DNLVG 62
Query: 299 VLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEA 478
+ F ++ K+G + I KS N+Y ILV +++ S+N + S +EIF++
Sbjct: 63 IHFIDDEKIGKSSIEKVIETYKSINIYHLILVINQKMSSASQNIV--NVSDLKIEIFKDE 120
Query: 479 ELLVNVKDHVLVPEHQVLTDTEKKTLLER 565
EL+ N+ HV VP H++L DTEK ++LE+
Sbjct: 121 ELMFNITKHVSVPRHRILNDTEKNSILEK 149
[174][TOP]
>UniRef100_C7Z7I7 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7Z7I7_NECH7
Length = 234
Score = 73.9 bits (180), Expect = 8e-12
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKY------------------GEN 235
E+ RL+R +TV EM+ DR Y + + EV +S D FR++Y E+
Sbjct: 14 EVVRLWRAWRTVHEMVADREYELAEEEVKISLDRFRDEYCNPDGSINRAKLQFSARPSES 73
Query: 236 MKREDLVINKAKKNKPSDQ---IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSS 406
M R+ A K P I+V F + G+ +R + + + + I+V
Sbjct: 74 MLRKFTPPATADKPDPVPDCGPIWVEFLADKTFGVSQIRQFATYVITNHYKTGIMVTHVP 133
Query: 407 LTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
L+ ++ + + S +E F E +LLVN+ H LVP+H +L+ EK LL+RY L
Sbjct: 134 LSPAARKSLASVESLAKIECFLEDDLLVNITHHELVPKHVLLSRDEKTALLKRYRL 189
[175][TOP]
>UniRef100_A9USL7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9USL7_MONBE
Length = 176
Score = 73.6 bits (179), Expect = 1e-11
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Frame = +2
Query: 86 ATMVFSENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYG-----ENMKRED 250
A +++ + RL+R+R T+ ++ +DRGY V ++ ++++ F E++G E +R D
Sbjct: 2 AEEALNQSLLYRLWRVRVTLAQLCQDRGYDVKSEDLLLTREGFAERFGSQPLNEQPRRSD 61
Query: 251 LVINKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNF 430
L + + P+DQ+ V F + KVGI V+R
Sbjct: 62 LDFVVQRASDPTDQLGVYFANDPKVGIAVVR----------------------------- 92
Query: 431 IFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ F+E EL+VNV H LVP+H + T EK LLERY L
Sbjct: 93 ----------DFFEEKELVVNVTKHELVPKHFLQTPEEKAALLERYKL 130
[176][TOP]
>UniRef100_UPI000023E584 hypothetical protein FG09748.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E584
Length = 253
Score = 71.6 bits (174), Expect = 4e-11
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 25/180 (13%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGE-------NMKREDLVINK- 265
E+ RL+R +TV EM+ DR Y + + EV +S D FR++Y N R L +
Sbjct: 14 EVVRLWRAWRTVHEMVADREYELAEEEVKISLDRFRDEYCNPDGSININYSRNKLSFSAR 73
Query: 266 ---------------AKKNKPSD--QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILV 394
A + +D I++ F + G+ +R + + + S N I++
Sbjct: 74 PSTAMMRKFTPPATAANPDPVADCGPIWIEFLADKTFGVSQIRAFASYVISNNYKTGIMI 133
Query: 395 CQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
L+ ++ + + S +E F E +LLVN+ H LVP+H +L+ EK LL+RY L
Sbjct: 134 THVPLSPAARRSLASVESLAKIECFLEDDLLVNITHHELVPKHVLLSREEKIALLKRYRL 193
[177][TOP]
>UniRef100_Q0D0C1 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Aspergillus terreus NIH2624 RepID=Q0D0C1_ASPTN
Length = 219
Score = 70.5 bits (171), Expect = 9e-11
Identities = 53/166 (31%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Frame = +2
Query: 95 VFSENEMTRLYRIRKTVMEMLRDRG--YLVGDFEVNMSKDEFREKYGENMKREDLVINKA 268
V ++ EMTRL+R +TV EML+DR + + +K + + + E M+ + + K
Sbjct: 10 VDADREMTRLWRTWRTVFEMLQDRPSPQRILLTLASRAKMKIQARPTEAMQVKYTPLTKQ 69
Query: 269 KKNK-PSD--QIYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
++ P+D IYV F P+ VG +R + + + N + I + Q+ ++ + +
Sbjct: 70 GQSPAPADCGTIYVEFCPDSSGVGTKQVRAFNHTVDEHNFHTGIFITQTPISPSAVRLLS 129
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ + E FQE +LLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 130 GVPGRI-CEHFQEQDLLVNITRHELVPKHVLLSPEEKKRLLDRYRL 174
[178][TOP]
>UniRef100_A4QW70 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4QW70_MAGGR
Length = 259
Score = 70.5 bits (171), Expect = 9e-11
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGE---NMKREDLVINK-------- 265
+L+R +T+ +ML DRGY + + E N+S + F + + N+ + L +
Sbjct: 12 KLWRAWRTIHQMLSDRGYELSEEECNISIERFLADFTDGNGNVDQSKLTFSARPSDAMLK 71
Query: 266 --AKKNKPSD--------QIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTT 415
A+ P+D I+V F E K+G+ + ++ + ILV Q +L++
Sbjct: 72 LHARIPTPTDPDPAPDCGSIWVEFINEEKIGVGRTKQFVEVLLQSGFRDGILVTQGALSS 131
Query: 416 QSKNFIFEMASKFH-LEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
++ + S + +E F +LLVN+ H LVP+H +L+ EKK LLERY L
Sbjct: 132 GARRALSATGSGDNKVEAFMLEDLLVNITHHELVPKHVMLSRVEKKALLERYRL 185
[179][TOP]
>UniRef100_Q4YN15 DNA-directed RNA polymerase 2, putative (Fragment) n=1
Tax=Plasmodium berghei RepID=Q4YN15_PLABE
Length = 107
Score = 69.7 bits (169), Expect = 2e-10
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNK 280
E+ +TR Y+ RKT EML DRGY++ E + F+E + EN K R + I + KN
Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIITAREKLENFAAFKELFEENEKLRSRMTIITSHKND 61
Query: 281 PSDQIYVLFPEEV-KVGIHVLRTYINRMKSENVYRAILVCQSSLT 412
+++I V F +EV K G+ LR +M +++ RAILV Q++LT
Sbjct: 62 ANNKIIVYFVDEVKKTGVKPLRELTEKMDEKSIQRAILVTQNTLT 106
[180][TOP]
>UniRef100_B5LZ31 RNA polymerase II (Fragment) n=1 Tax=Psetta maxima
RepID=B5LZ31_PSEMX
Length = 87
Score = 69.3 bits (168), Expect = 2e-10
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Frame = +2
Query: 188 EVNMSKDEFREKYGENM-----KREDLVINKAKKNKPSDQIYVLFPEEVKVGIHVLRTYI 352
E++ + DEF+ ++G+ +R DL + A + P+DQ++V FPEE KVGI ++ Y
Sbjct: 3 ELDQTLDEFKSQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKMYC 62
Query: 353 NRMKSENVYRAILVCQSSLTTQSK 424
RM+ EN+ RAI+V Q +T +K
Sbjct: 63 QRMQEENITRAIIVVQMGMTPSAK 86
[181][TOP]
>UniRef100_Q2H038 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2H038_CHAGB
Length = 220
Score = 69.3 bits (168), Expect = 2e-10
Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Frame = +2
Query: 110 EMTRL-YRIRKTVMEMLRDR---GYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKN 277
E+TRL Y + + +++ DR Y D N SK +F + E+M ++
Sbjct: 13 EVTRLDYELAEDEVKISLDRFRLEYTNDDGSPNRSKMQFSARPSESMIKKFTPPPTPSNP 72
Query: 278 KPSDQ---IYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMA 445
P+ + I+V F PE+ +GI+V++ ++ + N ILV +L+ Q++ + +
Sbjct: 73 DPAPECGTIWVEFCPEKASIGINVMKKFVEHCGTNNFKAGILVTAVALSAQARKVMTVTS 132
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+E F E +LLVN+ H LVP+H +L+ EK LL+RY L
Sbjct: 133 QYTLIECFLEEDLLVNITHHELVPKHVLLSREEKTALLKRYRL 175
[182][TOP]
>UniRef100_B4DJ89 cDNA FLJ55074, highly similar to DNA-directed RNA polymerase II 23
kDa polypeptide (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DJ89_HUMAN
Length = 117
Score = 68.6 bits (166), Expect = 3e-10
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +2
Query: 359 MKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTD 538
M+ EN+ RA++V Q +T +K + +MA K+ LE F + ELL+N+ +H LVPEH V+T
Sbjct: 1 MQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTK 60
Query: 539 TEKKTLLERYTL 574
E LL RY L
Sbjct: 61 EEVTELLARYKL 72
[183][TOP]
>UniRef100_Q59PF3 Putative uncharacterized protein RPB5 n=1 Tax=Candida albicans
RepID=Q59PF3_CANAL
Length = 179
Score = 68.6 bits (166), Expect = 3e-10
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Frame = +2
Query: 197 MSKDEFREKYGENM---KREDLVINKA------KKNKPSDQIYVLFPEEVKVGIHVLRTY 349
M+ +EFR K ++M +R+ + +K + ++V F +E VGI +R +
Sbjct: 1 MTLEEFRSKICDSMGTPQRKQMCFQATPTAETLEKFPETGSLWVEFCDEASVGIKTMRNF 60
Query: 350 INRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQV 529
+ +N I + Q+S+T S N + S +EIFQE +L+VN+ H LVP+H
Sbjct: 61 CIHITEKNFSTGIFIYQNSMTP-SANKLIPTVSPATIEIFQENDLIVNITHHELVPKHLK 119
Query: 530 LTDTEKKTLLERYTL 574
L EKK LL RY L
Sbjct: 120 LNREEKKELLTRYRL 134
[184][TOP]
>UniRef100_B4GWF6 GL16452 n=1 Tax=Drosophila persimilis RepID=B4GWF6_DROPE
Length = 126
Score = 67.4 bits (163), Expect = 7e-10
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-----REDLVINKA 268
E E+ +L+ IRKTV EM DRGYLV E++ + ++F E +G+ R DL +
Sbjct: 8 EAEIYKLWHIRKTVFEMSHDRGYLVTQGELDQTVEQFTELFGDKPSEQRPMRSDLTMVLT 67
Query: 269 KKNKPSDQIYVLFPEEVKVGIHVLRTYINRMK 364
+ P +++ V FPEE KV + ++ + NRM+
Sbjct: 68 HADDPKNRMLVFFPEEPKVAVRTIKAFANRMR 99
[185][TOP]
>UniRef100_A5DHL4 DNA-directed RNA polymerases II 24 kDa polypeptide n=1 Tax=Pichia
guilliermondii RepID=A5DHL4_PICGU
Length = 179
Score = 66.6 bits (161), Expect = 1e-09
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Frame = +2
Query: 197 MSKDEFREKYGENMKREDLVINKAKKNKPSD---------QIYVLFPEEVKVGIHVLRTY 349
MS DEFR K ++M + + N ++ ++V F +E VGI +R +
Sbjct: 1 MSLDEFRSKICDSMGLPQRKMMCFQANPTAEALEKFPDMGSLWVEFCDEASVGIKTMRNF 60
Query: 350 INRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQV 529
+ +N I + Q+S+T S N + + +E FQE++L+VN+ H LVP+H
Sbjct: 61 CIHISEKNFSTGIFIYQNSITP-SANKLVPTVAPASIETFQESDLIVNITHHDLVPKHIK 119
Query: 530 LTDTEKKTLLERYTL 574
L+ EKK LL RY L
Sbjct: 120 LSIGEKKELLARYRL 134
[186][TOP]
>UniRef100_A5E1U0 DNA-directed RNA polymerases II 24 kDa polypeptide n=1
Tax=Lodderomyces elongisporus RepID=A5E1U0_LODEL
Length = 179
Score = 65.5 bits (158), Expect = 3e-09
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Frame = +2
Query: 197 MSKDEFREKYGENM---KREDLVINKAKKNKPSDQ------IYVLFPEEVKVGIHVLRTY 349
M+ +EFR K ++M +R+ + + D+ ++V F +E VGI +R +
Sbjct: 1 MTLEEFRAKVCDSMGYPQRKLMCFQATPTAEQLDKFPEMGSLWVEFCDEPSVGIKTMRNF 60
Query: 350 INRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQV 529
+ +N I + Q+S+T S N + +E FQE +L+VN+ H LVP+H
Sbjct: 61 CIHISEKNFQVGIFIYQNSITP-SANKLIPTVQPASIETFQETDLIVNITHHELVPKHIK 119
Query: 530 LTDTEKKTLLERYTL 574
L EKK LLERY L
Sbjct: 120 LNREEKKELLERYRL 134
[187][TOP]
>UniRef100_Q388R5 DNA-directed RNA polymerases II subunit, putative n=1
Tax=Trypanosoma brucei RepID=Q388R5_9TRYP
Length = 219
Score = 65.1 bits (157), Expect = 4e-09
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQI- 295
R++R+ +TV EM+RDR Y V + + +F E+Y + RE I + + P +++
Sbjct: 17 RMFRVMRTVGEMMRDRKYQVPSSIIPETVGQFCEQY---VDREGRRIYRERMTVPCERVG 73
Query: 296 -------YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNF---IFEMA 445
V F E+ G+ ++ Y N R I+V + K + I
Sbjct: 74 GTHRSRAMVFFASEL--GMEGMKGYCQTAMDANCERVIIVTHGKVNATVKRYVDCINRSG 131
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +++F E +L+VN+ H LVP+H L D E K +LE ++L
Sbjct: 132 TGQKVQLFDEDDLVVNITHHELVPKHTQLEDEEVKEMLEAHSL 174
[188][TOP]
>UniRef100_C9ZZV1 DNA-directed RNA polymerases II subunit, putative n=2
Tax=Trypanosoma brucei RepID=C9ZZV1_TRYBG
Length = 219
Score = 65.1 bits (157), Expect = 4e-09
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQI- 295
R++R+ +TV EM+RDR Y V + + +F E+Y + RE I + + P +++
Sbjct: 17 RMFRVMRTVGEMMRDRKYQVPSSIIPETVGQFCEQY---VDREGKRIYRERMTVPCERVG 73
Query: 296 -------YVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNF---IFEMA 445
V F E+ G+ ++ Y N R I+V + K + I
Sbjct: 74 GTHRSRAMVFFASEL--GMEGMKGYCQTAMDANCERVIIVTHGKVNATVKRYVDCINRSG 131
Query: 446 SKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ +++F E +L+VN+ H LVP+H L D E K +LE ++L
Sbjct: 132 TGQKVQLFDEDDLVVNITHHELVPKHTQLEDEEVKEMLEAHSL 174
[189][TOP]
>UniRef100_Q6MY78 DNA-directed RNA polymerase, putative n=1 Tax=Aspergillus fumigatus
RepID=Q6MY78_ASPFU
Length = 220
Score = 65.1 bits (157), Expect = 4e-09
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Frame = +2
Query: 101 SENEMTRLYRIRKTVMEMLRDRG------YLVGDFEVNMSKDEFREKYGENMKREDLVIN 262
++ EMTRL+R +TV EML DR + + + K R K L
Sbjct: 11 ADREMTRLWRTWRTVFEMLADRPRSTRLTHFLQPYSRTKMKISARPTAAMQAKYTPLPTP 70
Query: 263 KAKKNKPS-DQIYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIF 436
+P IYV F + VG +R + + + N + + + Q+ ++ + +
Sbjct: 71 ANPDPQPDCGTIYVEFCADSTGVGTKQVRAFNHFVDENNFHTGVFITQTPISPSAVRLLS 130
Query: 437 EMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ + E FQE +LLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 131 GIPGRI-CEHFQEQDLLVNITRHELVPKHVLLSPEEKKNLLQRYRL 175
[190][TOP]
>UniRef100_Q7RKX0 RNA polymerase Rpb5, C-terminal domain, putative n=1 Tax=Plasmodium
yoelii yoelii RepID=Q7RKX0_PLAYO
Length = 112
Score = 64.3 bits (155), Expect = 6e-09
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +2
Query: 356 RMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLT 535
+M +++ RAILV Q++LT +K+ I E A + +E F + ELLVN+ H LVP+H LT
Sbjct: 9 KMDEKSIQRAILVTQNTLTPFAKDAIKEAAPRHIIENFLDTELLVNITKHELVPKHIPLT 68
Query: 536 DTEKKTLLERYTL 574
EK+ LL+RY +
Sbjct: 69 SDEKRNLLQRYKI 81
[191][TOP]
>UniRef100_Q4XTK3 DNA-directed RNA polymerase 2, putative n=1 Tax=Plasmodium chabaudi
RepID=Q4XTK3_PLACH
Length = 126
Score = 64.3 bits (155), Expect = 6e-09
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +2
Query: 356 RMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLT 535
+M +++ RAILV Q++LT +K+ I E A + +E F + ELLVN+ H LVP+H LT
Sbjct: 9 KMDEKSIQRAILVTQNTLTPFAKDAIKEAAPRHIIENFLDTELLVNITKHELVPKHIPLT 68
Query: 536 DTEKKTLLERYTL 574
EK+ LL+RY +
Sbjct: 69 SDEKRNLLQRYKI 81
[192][TOP]
>UniRef100_Q8T1Q5 DNA-directed RNA polymerases II, putative n=1 Tax=Trypanosoma cruzi
RepID=Q8T1Q5_TRYCR
Length = 219
Score = 63.9 bits (154), Expect = 8e-09
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 9/161 (5%)
Frame = +2
Query: 119 RLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQIY 298
+++R+ +TV EM+ DR Y V D + S +EF++ Y + RE VI + + P ++I
Sbjct: 17 KMFRVMRTVGEMMCDRKYQVADKIIPSSVEEFKDWYTD--PREG-VIYRDRMTVPCERIG 73
Query: 299 VLFPEEVKV------GIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASK--- 451
V V + ++ Y + N R I+V Q + K + ++
Sbjct: 74 VSQRSRAMVFFSEGLSMETMKRYHTQASEANCDRVIIVVQGRINAIVKRHVEDINRSSLG 133
Query: 452 FHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+++F E +L+VN+ H LVP+H L D E K +L+ + L
Sbjct: 134 LKIQLFDEDDLVVNITHHELVPKHTQLEDEEVKEMLQAHAL 174
[193][TOP]
>UniRef100_Q8CI23 Polymerase (RNA) II (DNA directed) polypeptide E n=1 Tax=Mus
musculus RepID=Q8CI23_MOUSE
Length = 96
Score = 62.8 bits (151), Expect = 2e-08
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGE-----NMKREDLVINKA 268
E E RL++IRKT+M++ DRGYLV E++ + +EF+ ++G+ +R DL + A
Sbjct: 4 EEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVLVA 63
Query: 269 KKNKPSDQIYVLFPEE 316
+ P+DQ++V FP E
Sbjct: 64 HNDDPTDQMFVFFPGE 79
[194][TOP]
>UniRef100_Q3LW39 RNA polymerase I, II and III n=1 Tax=Bigelowiella natans
RepID=Q3LW39_BIGNA
Length = 204
Score = 62.8 bits (151), Expect = 2e-08
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Frame = +2
Query: 113 MTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK--REDLVINKAKKNKPS 286
+ + Y ++ EML RGY V +N++ +F++K E + + +IN N +
Sbjct: 6 LEKYYLLKNNYYEMLYRRGYYVEKKVLNLNYSQFKKKCIEKKRYFKSFKIINHL--NDTN 63
Query: 287 DQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEI 466
++I + + + ++ L I + K+ N I + + L+ Q+ + F++EI
Sbjct: 64 NKIIGFYNNKGLIDVNYLGLKIEKAKTNNSNSIIFITKRYLSKQTNIALSHFRRNFNIEI 123
Query: 467 FQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
F E E+L+N H LVP+H +L K+ +L+ Y +
Sbjct: 124 FFEYEILINPIKHFLVPKHVLLAPDIKRKILKSYNV 159
[195][TOP]
>UniRef100_UPI0001925DCF PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide E, partial n=1 Tax=Hydra magnipapillata
RepID=UPI0001925DCF
Length = 187
Score = 61.2 bits (147), Expect = 5e-08
Identities = 44/131 (33%), Positives = 61/131 (46%)
Frame = +2
Query: 182 DFEVNMSKDEFREKYGENMKREDLVINKAKKNKPSDQIYVLFPEEVKVGIHVLRTYINRM 361
D E N++KD ++ + K D +I K Q++V FPEE KVGI ++ Y RM
Sbjct: 24 DIEWNIAKDI---EWNIDKKNHDKLIKLFDSTKY--QMFVFFPEEEKVGIKTIKQYCTRM 78
Query: 362 KSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDT 541
+ E + RAI+V Q+ +T +K LVPEH VL+
Sbjct: 79 QEEGINRAIIVVQTGMTPSAKQ---------------------------LVPEHVVLSPE 111
Query: 542 EKKTLLERYTL 574
EK LL RY L
Sbjct: 112 EKAELLTRYKL 122
[196][TOP]
>UniRef100_A5B0H1 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B0H1_VITVI
Length = 162
Score = 60.5 bits (145), Expect = 9e-08
Identities = 32/94 (34%), Positives = 55/94 (58%)
Frame = +2
Query: 293 IYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIFQ 472
I V+F ++ V+R ++ E ++R ILV QS + + ++ + E K +E FQ
Sbjct: 26 ILVVFCGTDEIRKAVIRVIFQQINREGLHRLILVLQSKMNSHARKVVDEYPIK--VEFFQ 83
Query: 473 EAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
ELL+N+ HV VP+H++L+ EK+ L+ +Y L
Sbjct: 84 ITELLINITKHVSVPKHEILSAQEKRKLVNKYKL 117
[197][TOP]
>UniRef100_A0BL34 Chromosome undetermined scaffold_113, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0BL34_PARTE
Length = 224
Score = 59.7 bits (143), Expect = 2e-07
Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 17/165 (10%)
Frame = +2
Query: 125 YRIRKTVMEMLRDRGYLVGDFEVN---MSKDE----FREKYGENMKREDLVINKAKKNKP 283
Y++ +T+ M+R RGY FE N + +DE F KY ++ + +V K K+++
Sbjct: 18 YKVFQTLASMIRQRGY----FEANPPILIEDEPFELFEAKYRTDVLPQRVVCFK-KEDET 72
Query: 284 SDQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSS--------LTTQSKNFIFE 439
+ + ++ + + YI+ + + V R I+V + + +++ FI +
Sbjct: 73 DKMVIQFYTKQTALNYDDAKKYISELSNRQVKRLIMVFPTDPFATKPQVVEKKARFFIDQ 132
Query: 440 MAS--KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERY 568
+ S + E+F E +L+ +V H LVP+H +L D EK+ LL++Y
Sbjct: 133 VNSIQTYSFELFGEDDLVYDVTKHELVPQHIILNDKEKELLLKKY 177
[198][TOP]
>UniRef100_C0S407 DNA-directed RNA polymerases I n=1 Tax=Paracoccidioides
brasiliensis Pb03 RepID=C0S407_PARBP
Length = 171
Score = 59.3 bits (142), Expect = 2e-07
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +2
Query: 293 IYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
IYV F +++ VG +R + + + +N + I + Q+ ++ + + + +F E F
Sbjct: 33 IYVEFCADIQSVGTKQVRAFNHFIDEQNYHTGIFISQTPISPSAMRVLNSIPGRF-CEHF 91
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
QE ELLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 92 QEQELLVNITHHELVPKHILLSAEEKKRLLQRYRL 126
[199][TOP]
>UniRef100_Q7RKX1 Putative uncharacterized protein PY02778 n=1 Tax=Plasmodium yoelii
yoelii RepID=Q7RKX1_PLAYO
Length = 91
Score = 57.4 bits (137), Expect = 8e-07
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENMK-REDLVINKAKKNK 280
E+ +TR Y+ RKT EML DRGY++ E + F+E + EN K R + I + KN
Sbjct: 2 EDPVTRFYKCRKTCCEMLEDRGYIITAREKLENFAAFKELFEENEKLRSRMTIITSHKND 61
Query: 281 PSDQIYVLFPEEV-KVGIHVLRTYINRMK 364
+++I V F +EV K G+ LR Y ++K
Sbjct: 62 ANNKIIVYFVDEVKKTGVKPLREYNKKIK 90
[200][TOP]
>UniRef100_Q8SRJ3 DNA-DIRECTED RNA POLYMERASE I n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SRJ3_ENCCU
Length = 212
Score = 57.4 bits (137), Expect = 8e-07
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Frame = +2
Query: 110 EMTRLYRIRKTVMEMLRDRGYLVGDFEVNMSKDEFREKYGENM-KREDLVINKAKKNKPS 286
E+ L R T +EM+RDRGY EV ++ D F E+Y + KR L ++P
Sbjct: 14 ELRALCLSRNTAIEMVRDRGYTTTQ-EV-LALDGFHERYPLALTKRSTLNFVCVNVDRP- 70
Query: 287 DQIYVLFPEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEI 466
+ V F ++ K+G +++ + +N++ IL+ L + + + + +F +EI
Sbjct: 71 --VAVHFGDDEKMGKKAFEGLLSQYEKDNMFHLILILPQ-LPSPTVMSMIPLTPRFSIEI 127
Query: 467 FQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
F EL+ N H VP H+VL+ E++++ L
Sbjct: 128 FLVEELIFNKTKHSWVPPHRVLSREERESVFRTLKL 163
[201][TOP]
>UniRef100_A0BLZ0 Chromosome undetermined scaffold_115, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0BLZ0_PARTE
Length = 223
Score = 57.0 bits (136), Expect = 1e-06
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Frame = +2
Query: 125 YRIRKTVMEMLRDRGYLVGDFEVNMSKDE----FREKYGENMKREDLVINKAKKNKPSDQ 292
Y+I +T+ M+R RGY + +DE F KY +N+ + + K++ SD+
Sbjct: 18 YKIFQTLASMIRQRGYFEST-PAKLVEDETFEIFESKYRDNLPEKIVCF---KRDDESDK 73
Query: 293 IYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILVCQSS--------LTTQSKNFIFEMA 445
+ ++F ++ + + I + V R I++ + + +++ FI ++
Sbjct: 74 LLIIFYTKQAPLTHEEAKKTIQDFSNRQVKRLIMIFPTDPFATKPQVVDKKARLFIDQVN 133
Query: 446 S--KFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
S + E+F E +L+ +V H LVP+H +L D EK+ LL++Y L
Sbjct: 134 SIQTYSFELFGEDDLVYDVTKHELVPQHIILNDREKELLLKKYGL 178
[202][TOP]
>UniRef100_UPI0001B7AB22 UPI0001B7AB22 related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7AB22
Length = 79
Score = 56.6 bits (135), Expect = 1e-06
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Frame = +2
Query: 104 ENEMTRLYRIRKTVME--MLRDRGYLVGDFEVNMSKDEFREKYGE-----NMKREDLVIN 262
E E RL++IRKT+M+ + DRGYLV E++ + +EF+ ++G+ +R DL +
Sbjct: 4 EEETYRLWKIRKTIMQATLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTVL 63
Query: 263 KAKKNKPSDQIYVLFP 310
A + P+DQ++V FP
Sbjct: 64 VAHNDDPTDQMFVFFP 79
[203][TOP]
>UniRef100_B6QBA8 RNA polymerase subunit n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QBA8_PENMQ
Length = 172
Score = 53.9 bits (128), Expect = 9e-06
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Frame = +2
Query: 272 KNKPSD--------QIYVLFPEEVK-VGIHVLRTYINRMKSENVYRAILVCQSSLTTQSK 424
K +P+D QI+V F E+ VG +R + + + N + I + +++++ +
Sbjct: 19 KKRPTDPDPVPDCGQIFVQFCEDTTGVGAKQVRQFNHLVDEGNYHSGIFITRTAISPSAV 78
Query: 425 NFIFEMASKFHLEIFQEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
+ A E FQE++LLVN+ H LVP+H +L+ EK LLERY L
Sbjct: 79 RLL-NSAIGHICEHFQESDLLVNITHHELVPKHVLLSAEEKARLLERYRL 127
[204][TOP]
>UniRef100_B0XMP1 RNA polymerase subunit n=2 Tax=Aspergillus fumigatus
RepID=B0XMP1_ASPFC
Length = 171
Score = 53.9 bits (128), Expect = 9e-06
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 293 IYVLF-PEEVKVGIHVLRTYINRMKSENVYRAILVCQSSLTTQSKNFIFEMASKFHLEIF 469
IYV F + VG +R + + + N + + + Q+ ++ + + + + E F
Sbjct: 33 IYVEFCADSTGVGTKQVRAFNHFVDENNFHTGVFITQTPISPSAVRLLSGIPGRI-CEHF 91
Query: 470 QEAELLVNVKDHVLVPEHQVLTDTEKKTLLERYTL 574
QE +LLVN+ H LVP+H +L+ EKK LL+RY L
Sbjct: 92 QEQDLLVNITRHELVPKHVLLSPEEKKNLLQRYRL 126