BB910080 ( RCE08983 )

[UP]


[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=UPI0000163E03
          Length = 824

 Score =  269 bits (688), Expect = 1e-70
 Identities = 128/193 (66%), Positives = 152/193 (78%)
 Frame = +3

Query: 3    KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
            KMG+ GEHVPI+YG G+G LPTK WV+ FG+ S+LKN  GYLI+P+LR Q+EAGKR++FM
Sbjct: 607  KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 666

Query: 183  SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
            SPAPYVANNAALIAFG+  ++L Q+DALVHYRN IPEST+GLEQYFDAP+P A IG FYF
Sbjct: 667  SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 726

Query: 363  ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
            A+G+TYA L E+KE KVL YE   PTL+LN AAKD  VPCMVA     +  V LACD+ M
Sbjct: 727  ANGETYAALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKVSLACDSTM 785

Query: 543  CPHHHTTASNYEE 581
            CPHH      YE+
Sbjct: 786  CPHHTAVCETYEK 798

[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  269 bits (688), Expect = 1e-70
 Identities = 128/193 (66%), Positives = 152/193 (78%)
 Frame = +3

Query: 3    KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
            KMG+ GEHVPI+YG G+G LPTK WV+ FG+ S+LKN  GYLI+P+LR Q+EAGKR++FM
Sbjct: 2047 KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 2106

Query: 183  SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
            SPAPYVANNAALIAFG+  ++L Q+DALVHYRN IPEST+GLEQYFDAP+P A IG FYF
Sbjct: 2107 SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 2166

Query: 363  ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
            A+G+TYA L E+KE KVL YE   PTL+LN AAKD  VPCMVA     +  V LACD+ M
Sbjct: 2167 ANGETYAALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKVSLACDSTM 2225

Query: 543  CPHHHTTASNYEE 581
            CPHH      YE+
Sbjct: 2226 CPHHTAVCETYEK 2238

[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  264 bits (674), Expect = 4e-69
 Identities = 128/192 (66%), Positives = 153/192 (79%)
 Frame = +3

Query: 3    KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
            K G+ GE+VPI +G GIG LPTK WV  FGK S+LKN+KGYLI  LLREQ+EAGKR+IFM
Sbjct: 607  KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 666

Query: 183  SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
             PAPYVANNAALI+FGSA ++L Q+DAL HYRN IPEST+GLEQYFDAPIPQA++G FYF
Sbjct: 667  GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 726

Query: 363  ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
             DG+TY  L E+K+ KVL YE  LPT +LN+AAKD  VPCMVA+    +  V +ACD+ M
Sbjct: 727  GDGETYTALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTVRMACDSNM 785

Query: 543  CPHHHTTASNYE 578
            CPHH  T +N+E
Sbjct: 786  CPHHSATCANFE 797

[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  264 bits (674), Expect = 4e-69
 Identities = 128/192 (66%), Positives = 153/192 (79%)
 Frame = +3

Query: 3    KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
            K G+ GE+VPI +G GIG LPTK WV  FGK S+LKN+KGYLI  LLREQ+EAGKR+IFM
Sbjct: 2049 KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 2108

Query: 183  SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
             PAPYVANNAALI+FGSA ++L Q+DAL HYRN IPEST+GLEQYFDAPIPQA++G FYF
Sbjct: 2109 GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 2168

Query: 363  ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
             DG+TY  L E+K+ KVL YE  LPT +LN+AAKD  VPCMVA+    +  V +ACD+ M
Sbjct: 2169 GDGETYTALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTVRMACDSNM 2227

Query: 543  CPHHHTTASNYE 578
            CPHH  T +N+E
Sbjct: 2228 CPHHSATCANFE 2239

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=UPI00017F0C90
          Length = 826

 Score =  212 bits (540), Expect = 1e-53
 Identities = 101/188 (53%), Positives = 127/188 (67%)
 Frame = +3

Query: 18   GEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPY 197
            G H+PIK GGG+G LPT  WV +FG+ S+LKN  GY  Y LL EQ+E GKR++FMS APY
Sbjct: 610  GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPY 669

Query: 198  VANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYFADGDT 377
            VA NAALI+FGS+ ++L ++  L HYRN IPES  GL  YFDAP+P A IG+ YFA+G+T
Sbjct: 670  VAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGET 729

Query: 378  YAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKMCPHHH 557
            YA L EFK  +VL         +LN A + G VPC+ A   G +  V L C+  MCPHHH
Sbjct: 730  YAALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKVSLVCNKTMCPHHH 789

Query: 558  TTASNYEE 581
             T   +E+
Sbjct: 790  HTGPTFEQ 797

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  212 bits (540), Expect = 1e-53
 Identities = 101/188 (53%), Positives = 127/188 (67%)
 Frame = +3

Query: 18   GEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPY 197
            G H+PIK GGG+G LPT  WV +FG+ S+LKN  GY  Y LL EQ+E GKR++FMS APY
Sbjct: 2036 GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPY 2095

Query: 198  VANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYFADGDT 377
            VA NAALI+FGS+ ++L ++  L HYRN IPES  GL  YFDAP+P A IG+ YFA+G+T
Sbjct: 2096 VAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGET 2155

Query: 378  YAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKMCPHHH 557
            YA L EFK  +VL         +LN A + G VPC+ A   G +  V L C+  MCPHHH
Sbjct: 2156 YAALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKVSLVCNKTMCPHHH 2215

Query: 558  TTASNYEE 581
             T   +E+
Sbjct: 2216 HTGPTFEQ 2223

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=UPI00003FE52F
          Length = 846

 Score =  153 bits (387), Expect = 8e-36
 Identities = 86/196 (43%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
 Frame = +3

Query: 3    KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
            K G  G  VP++ G GIG LPT +WV  F + ++L +A GY I+  +R  +E+GK ++F 
Sbjct: 614  KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 673

Query: 183  SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANI-GQFY 359
            S APYVA NAAL+AFG A +LL  + AL  YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 674  SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 733

Query: 360  FADGDTYAVLNEFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKGKRCAVYL 524
             A+ ++ ++L E K   V+G   E   L     ++ +  K G +P M A     +  V L
Sbjct: 734  LANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAPNKFYVGL 793

Query: 525  ACDNKMCPHHHTTASN 572
             C    CP H T++ +
Sbjct: 794  CCQKNFCPGHATSSDS 809

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  153 bits (387), Expect = 8e-36
 Identities = 86/196 (43%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
 Frame = +3

Query: 3    KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
            K G  G  VP++ G GIG LPT +WV  F + ++L +A GY I+  +R  +E+GK ++F 
Sbjct: 2104 KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 2163

Query: 183  SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANI-GQFY 359
            S APYVA NAAL+AFG A +LL  + AL  YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 2164 SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 2223

Query: 360  FADGDTYAVLNEFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKGKRCAVYL 524
             A+ ++ ++L E K   V+G   E   L     ++ +  K G +P M A     +  V L
Sbjct: 2224 LANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAPNKFYVGL 2283

Query: 525  ACDNKMCPHHHTTASN 572
             C    CP H T++ +
Sbjct: 2284 CCQKNFCPGHATSSDS 2299

[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score = 68.2 bits (165), Expect = 5e-10
 Identities = 37/101 (36%), Positives = 59/101 (58%)
 Frame = +3

Query: 18   GEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPY 197
            G H+P++ G G+GR+P++ WV  F    ++++ +  +IY    +   AGK IIF   APY
Sbjct: 1797 GIHIPVECGDGLGRMPSQDWVRRF---RRIRHVQIRVIY----DAYAAGKTIIFKDVAPY 1849

Query: 198  VANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYF 320
            +A   A I+F  A +  + RD L  Y N    +++G+EQYF
Sbjct: 1850 IAGWTAAISFACAQQ-YSYRDMLNRYNNVCTPNSSGIEQYF 1889