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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 269 bits (688), Expect = 1e-70
Identities = 128/193 (66%), Positives = 152/193 (78%)
Frame = +3
Query: 3 KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
KMG+ GEHVPI+YG G+G LPTK WV+ FG+ S+LKN GYLI+P+LR Q+EAGKR++FM
Sbjct: 607 KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 666
Query: 183 SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
SPAPYVANNAALIAFG+ ++L Q+DALVHYRN IPEST+GLEQYFDAP+P A IG FYF
Sbjct: 667 SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 726
Query: 363 ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
A+G+TYA L E+KE KVL YE PTL+LN AAKD VPCMVA + V LACD+ M
Sbjct: 727 ANGETYAALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKVSLACDSTM 785
Query: 543 CPHHHTTASNYEE 581
CPHH YE+
Sbjct: 786 CPHHTAVCETYEK 798
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 269 bits (688), Expect = 1e-70
Identities = 128/193 (66%), Positives = 152/193 (78%)
Frame = +3
Query: 3 KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
KMG+ GEHVPI+YG G+G LPTK WV+ FG+ S+LKN GYLI+P+LR Q+EAGKR++FM
Sbjct: 2047 KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 2106
Query: 183 SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
SPAPYVANNAALIAFG+ ++L Q+DALVHYRN IPEST+GLEQYFDAP+P A IG FYF
Sbjct: 2107 SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 2166
Query: 363 ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
A+G+TYA L E+KE KVL YE PTL+LN AAKD VPCMVA + V LACD+ M
Sbjct: 2167 ANGETYAALCEYKEGKVLNYE-GFPTLILNEAAKDRKVPCMVATQAKTKFKVSLACDSTM 2225
Query: 543 CPHHHTTASNYEE 581
CPHH YE+
Sbjct: 2226 CPHHTAVCETYEK 2238
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 264 bits (674), Expect = 4e-69
Identities = 128/192 (66%), Positives = 153/192 (79%)
Frame = +3
Query: 3 KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
K G+ GE+VPI +G GIG LPTK WV FGK S+LKN+KGYLI LLREQ+EAGKR+IFM
Sbjct: 607 KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 666
Query: 183 SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
PAPYVANNAALI+FGSA ++L Q+DAL HYRN IPEST+GLEQYFDAPIPQA++G FYF
Sbjct: 667 GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 726
Query: 363 ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
DG+TY L E+K+ KVL YE LPT +LN+AAKD VPCMVA+ + V +ACD+ M
Sbjct: 727 GDGETYTALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTVRMACDSNM 785
Query: 543 CPHHHTTASNYE 578
CPHH T +N+E
Sbjct: 786 CPHHSATCANFE 797
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 264 bits (674), Expect = 4e-69
Identities = 128/192 (66%), Positives = 153/192 (79%)
Frame = +3
Query: 3 KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
K G+ GE+VPI +G GIG LPTK WV FGK S+LKN+KGYLI LLREQ+EAGKR+IFM
Sbjct: 2049 KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 2108
Query: 183 SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYF 362
PAPYVANNAALI+FGSA ++L Q+DAL HYRN IPEST+GLEQYFDAPIPQA++G FYF
Sbjct: 2109 GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 2168
Query: 363 ADGDTYAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKM 542
DG+TY L E+K+ KVL YE LPT +LN+AAKD VPCMVA+ + V +ACD+ M
Sbjct: 2169 GDGETYTALCEYKDGKVLQYE-GLPTAILNQAAKDRKVPCMVARQWKSKFTVRMACDSNM 2227
Query: 543 CPHHHTTASNYE 578
CPHH T +N+E
Sbjct: 2228 CPHHSATCANFE 2239
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 212 bits (540), Expect = 1e-53
Identities = 101/188 (53%), Positives = 127/188 (67%)
Frame = +3
Query: 18 GEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPY 197
G H+PIK GGG+G LPT WV +FG+ S+LKN GY Y LL EQ+E GKR++FMS APY
Sbjct: 610 GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPY 669
Query: 198 VANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYFADGDT 377
VA NAALI+FGS+ ++L ++ L HYRN IPES GL YFDAP+P A IG+ YFA+G+T
Sbjct: 670 VAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGET 729
Query: 378 YAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKMCPHHH 557
YA L EFK +VL +LN A + G VPC+ A G + V L C+ MCPHHH
Sbjct: 730 YAALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKVSLVCNKTMCPHHH 789
Query: 558 TTASNYEE 581
T +E+
Sbjct: 790 HTGPTFEQ 797
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 212 bits (540), Expect = 1e-53
Identities = 101/188 (53%), Positives = 127/188 (67%)
Frame = +3
Query: 18 GEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPY 197
G H+PIK GGG+G LPT WV +FG+ S+LKN GY Y LL EQ+E GKR++FMS APY
Sbjct: 2036 GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPY 2095
Query: 198 VANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANIGQFYFADGDT 377
VA NAALI+FGS+ ++L ++ L HYRN IPES GL YFDAP+P A IG+ YFA+G+T
Sbjct: 2096 VAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGET 2155
Query: 378 YAVLNEFKEAKVLGYEKELPTLMLNRAAKDGNVPCMVAQMKGKRCAVYLACDNKMCPHHH 557
YA L EFK +VL +LN A + G VPC+ A G + V L C+ MCPHHH
Sbjct: 2156 YAALCEFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKVSLVCNKTMCPHHH 2215
Query: 558 TTASNYEE 581
T +E+
Sbjct: 2216 HTGPTFEQ 2223
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 153 bits (387), Expect = 8e-36
Identities = 86/196 (43%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Frame = +3
Query: 3 KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
K G G VP++ G GIG LPT +WV F + ++L +A GY I+ +R +E+GK ++F
Sbjct: 614 KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 673
Query: 183 SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANI-GQFY 359
S APYVA NAAL+AFG A +LL + AL YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 674 SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 733
Query: 360 FADGDTYAVLNEFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKGKRCAVYL 524
A+ ++ ++L E K V+G E L ++ + K G +P M A + V L
Sbjct: 734 LANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAPNKFYVGL 793
Query: 525 ACDNKMCPHHHTTASN 572
C CP H T++ +
Sbjct: 794 CCQKNFCPGHATSSDS 809
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 153 bits (387), Expect = 8e-36
Identities = 86/196 (43%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Frame = +3
Query: 3 KMGILGEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFM 182
K G G VP++ G GIG LPT +WV F + ++L +A GY I+ +R +E+GK ++F
Sbjct: 2104 KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 2163
Query: 183 SPAPYVANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANI-GQFY 359
S APYVA NAAL+AFG A +LL + AL YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 2164 SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 2223
Query: 360 FADGDTYAVLNEFKEAKVLGYEKELPTL-----MLNRAAKDGNVPCMVAQMKGKRCAVYL 524
A+ ++ ++L E K V+G E L ++ + K G +P M A + V L
Sbjct: 2224 LANAESESLLQEHKTGTVIGLTTEKFNLNGARDLIMQGQKLGKLPVMAATQAPNKFYVGL 2283
Query: 525 ACDNKMCPHHHTTASN 572
C CP H T++ +
Sbjct: 2284 CCQKNFCPGHATSSDS 2299
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 68.2 bits (165), Expect = 5e-10
Identities = 37/101 (36%), Positives = 59/101 (58%)
Frame = +3
Query: 18 GEHVPIKYGGGIGRLPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPY 197
G H+P++ G G+GR+P++ WV F ++++ + +IY + AGK IIF APY
Sbjct: 1797 GIHIPVECGDGLGRMPSQDWVRRF---RRIRHVQIRVIY----DAYAAGKTIIFKDVAPY 1849
Query: 198 VANNAALIAFGSATELLNQRDALVHYRNCIPESTTGLEQYF 320
+A A I+F A + + RD L Y N +++G+EQYF
Sbjct: 1850 IAGWTAAISFACAQQ-YSYRDMLNRYNNVCTPNSSGIEQYF 1889