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[1][TOP] >UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus RepID=UPI0000163E03 Length = 824 Score = 355 bits (911), Expect = 1e-96 Identities = 173/191 (90%), Positives = 180/191 (94%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRH LPCQVG Sbjct: 193 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHVLPCQVG 252 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLNAQVIECIA MIN+LYALSGESEVQ Sbjct: 253 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNAQVIECIAKMINRLYALSGESEVQ 312 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 QAQRYNMLMALVGRYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE Sbjct: 313 QAQRYNMLMALVGRYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPE 372 Query: 541 KCRFQQTVCLI 573 + RF Q VCL+ Sbjct: 373 RNRFNQVVCLL 383 [2][TOP] >UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus RepID=POL1_BRSV Length = 2264 Score = 355 bits (911), Expect = 1e-96 Identities = 173/191 (90%), Positives = 180/191 (94%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRH LPCQVG Sbjct: 1633 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHVLPCQVG 1692 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLNAQVIECIA MIN+LYALSGESEVQ Sbjct: 1693 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNAQVIECIAKMINRLYALSGESEVQ 1752 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 QAQRYNMLMALVGRYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE Sbjct: 1753 QAQRYNMLMALVGRYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPE 1812 Query: 541 KCRFQQTVCLI 573 + RF Q VCL+ Sbjct: 1813 RNRFNQVVCLL 1823 [3][TOP] >UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08 Length = 824 Score = 353 bits (906), Expect = 5e-96 Identities = 171/191 (89%), Positives = 180/191 (94%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRHRLPCQVG Sbjct: 193 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHRLPCQVG 252 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLN Q+IECIA MIN+LYALSGES+VQ Sbjct: 253 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGESDVQ 312 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 QAQRYNMLMALVGRYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE Sbjct: 313 QAQRYNMLMALVGRYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPE 372 Query: 541 KCRFQQTVCLI 573 + RF TVCL+ Sbjct: 373 RNRFGSTVCLL 383 [4][TOP] >UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus RepID=POL1_TBRVM Length = 2266 Score = 353 bits (906), Expect = 5e-96 Identities = 171/191 (89%), Positives = 180/191 (94%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRHRLPCQVG Sbjct: 1635 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHRLPCQVG 1694 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLN Q+IECIA MIN+LYALSGES+VQ Sbjct: 1695 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGESDVQ 1754 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 QAQRYNMLMALVGRYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE Sbjct: 1755 QAQRYNMLMALVGRYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPE 1814 Query: 541 KCRFQQTVCLI 573 + RF TVCL+ Sbjct: 1815 RNRFGSTVCLL 1825 [5][TOP] >UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus RepID=UPI00017F0C90 Length = 826 Score = 308 bits (789), Expect = 2e-82 Identities = 150/191 (78%), Positives = 162/191 (84%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIECPKDELLP RKIKVG CRLFEIMPLHYNL LR KTCAFT FLQ NRHRLPCQVG Sbjct: 191 ELVVIECPKDELLPARKIKVGPCRLFEIMPLHYNLLLRVKTCAFTAFLQHNRHRLPCQVG 250 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSREWGH+L RL R TNEAINCDYS FDGLL Q++E +A MIN+LY SGESEV Sbjct: 251 TNPYSREWGHLLNRLRRVKTNEAINCDYSGFDGLLTPQLVEMMAKMINRLYLRSGESEVM 310 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 QAQR NM+MAL GRYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PE Sbjct: 311 QAQRLNMIMALCGRYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPE 370 Query: 541 KCRFQQTVCLI 573 K F VCL+ Sbjct: 371 KNSFGINVCLL 381 [6][TOP] >UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus RepID=POL1_GCMV Length = 2252 Score = 308 bits (789), Expect = 2e-82 Identities = 150/191 (78%), Positives = 162/191 (84%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIECPKDELLP RKIKVG CRLFEIMPLHYNL LR KTCAFT FLQ NRHRLPCQVG Sbjct: 1617 ELVVIECPKDELLPARKIKVGPCRLFEIMPLHYNLLLRVKTCAFTAFLQHNRHRLPCQVG 1676 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSREWGH+L RL R TNEAINCDYS FDGLL Q++E +A MIN+LY SGESEV Sbjct: 1677 TNPYSREWGHLLNRLRRVKTNEAINCDYSGFDGLLTPQLVEMMAKMINRLYLRSGESEVM 1736 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 QAQR NM+MAL GRYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PE Sbjct: 1737 QAQRLNMIMALCGRYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPE 1796 Query: 541 KCRFQQTVCLI 573 K F VCL+ Sbjct: 1797 KNSFGINVCLL 1807 [7][TOP] >UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus RepID=UPI00003FE52F Length = 846 Score = 230 bits (586), Expect = 7e-59 Identities = 116/191 (60%), Positives = 141/191 (73%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIECPKDELL K+ ACR FEIMPLHYNLFLR+KT AF+ F Q NRH+L CQVG Sbjct: 203 ELVVIECPKDELLKTEKVNK-ACRPFEIMPLHYNLFLREKTLAFSLFQQRNRHKLACQVG 261 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 T YS +W H+ RL+ ++ AINCDYS+FDGLLN+QV+ CIANMIN +Y E+ V Sbjct: 262 TKAYSHDWTHMYQRLVAK-SDRAINCDYSSFDGLLNSQVVSCIANMINSMYHSPEETVVS 320 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 + QRYNM+ AL GR A GQ+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P+ Sbjct: 321 KRQRYNMINALFGRLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQ 380 Query: 541 KCRFQQTVCLI 573 + F V L+ Sbjct: 381 RNSFSTYVTLL 391 [8][TOP] >UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus RepID=POL1_CNSV Length = 2336 Score = 230 bits (586), Expect = 7e-59 Identities = 116/191 (60%), Positives = 141/191 (73%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ELVVIECPKDELL K+ ACR FEIMPLHYNLFLR+KT AF+ F Q NRH+L CQVG Sbjct: 1693 ELVVIECPKDELLKTEKVNK-ACRPFEIMPLHYNLFLREKTLAFSLFQQRNRHKLACQVG 1751 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 T YS +W H+ RL+ ++ AINCDYS+FDGLLN+QV+ CIANMIN +Y E+ V Sbjct: 1752 TKAYSHDWTHMYQRLVAK-SDRAINCDYSSFDGLLNSQVVSCIANMINSMYHSPEETVVS 1810 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 + QRYNM+ AL GR A GQ+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P+ Sbjct: 1811 KRQRYNMINALFGRLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQ 1870 Query: 541 KCRFQQTVCLI 573 + F V L+ Sbjct: 1871 RNSFSTYVTLL 1881 [9][TOP] >UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus RepID=UPI0000163D14 Length = 711 Score = 182 bits (462), Expect = 2e-44 Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RK+ R F I+P+ YNL +R+K F +F+ NRHRL CQVG Sbjct: 195 LVGIECPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRHRLSCQVG 254 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + AR+ G N+ + CDYS+FDGLL+ QV++ IA+MIN+L GE +++ Sbjct: 255 INPYSMEWSRLAARMKEKG-NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLK 311 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 A+R N+LMA R A V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL Sbjct: 312 NARR-NLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKL 365 [10][TOP] >UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus RepID=POL1_CPMV Length = 1866 Score = 182 bits (462), Expect = 2e-44 Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RK+ R F I+P+ YNL +R+K F +F+ NRHRL CQVG Sbjct: 1350 LVGIECPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRHRLSCQVG 1409 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + AR+ G N+ + CDYS+FDGLL+ QV++ IA+MIN+L GE +++ Sbjct: 1410 INPYSMEWSRLAARMKEKG-NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLK 1466 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 A+R N+LMA R A V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL Sbjct: 1467 NARR-NLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKL 1520 [11][TOP] >UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus RepID=UPI0000163DCE Length = 707 Score = 181 bits (459), Expect = 4e-44 Identities = 98/192 (51%), Positives = 129/192 (67%), Gaps = 1/192 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 E+V IE PKDE LP RKI + RLF I+PL +NL LR+K F+ LQ +R LP QV Sbjct: 188 EMVCIETPKDECLPLRKICIKPKTRLFSILPLEFNLLLRKKFLHFSSSLQMHRDTLPTQV 247 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREWG +L RL R ++ AINCDY++FDGLL Q++E I MINK+Y SE Sbjct: 248 GVNPYSREWGELLQRL-RAQSSVAINCDYASFDGLLTGQILEKIGTMINKMYI---GSEA 303 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 + QR N+LM++V R + G +V++V G+PSG ALTV++NS+FNE LIR+ +R Sbjct: 304 SKIQRLNLLMSIVNRKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGV 363 Query: 538 EKCRFQQTVCLI 573 + RF Q V L+ Sbjct: 364 PRERFSQYVTLL 375 [12][TOP] >UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus RepID=POL1_BRAV Length = 2094 Score = 181 bits (459), Expect = 4e-44 Identities = 98/192 (51%), Positives = 129/192 (67%), Gaps = 1/192 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 E+V IE PKDE LP RKI + RLF I+PL +NL LR+K F+ LQ +R LP QV Sbjct: 1575 EMVCIETPKDECLPLRKICIKPKTRLFSILPLEFNLLLRKKFLHFSSSLQMHRDTLPTQV 1634 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREWG +L RL R ++ AINCDY++FDGLL Q++E I MINK+Y SE Sbjct: 1635 GVNPYSREWGELLQRL-RAQSSVAINCDYASFDGLLTGQILEKIGTMINKMYI---GSEA 1690 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 + QR N+LM++V R + G +V++V G+PSG ALTV++NS+FNE LIR+ +R Sbjct: 1691 SKIQRLNLLMSIVNRKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGV 1750 Query: 538 EKCRFQQTVCLI 573 + RF Q V L+ Sbjct: 1751 PRERFSQYVTLL 1762 [13][TOP] >UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA9_9SECO Length = 985 Score = 181 bits (458), Expect = 5e-44 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%) Frame = +1 Query: 4 LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ ++ PKDE L P + ++ R F ++P+HYNL LR+ F+Q NRHRL C VG Sbjct: 474 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSFMQVNRHRLSCAVG 533 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSR+W I RL + A+NCDYS FDGLLN Q I N IN+LY ++ Sbjct: 534 TNPYSRDWTDIYQRLAEKNS-VAMNCDYSRFDGLLNYQAYVHIVNFINRLY-----NDEH 587 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 R N+LMA+ GR++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P Sbjct: 588 TIVRGNLLMAMYGRWSICGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRVTVPRPL 647 Query: 541 KCRFQQTVCLI 573 F Q VCLI Sbjct: 648 VNNFNQEVCLI 658 [14][TOP] >UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus RepID=UPI00003FE53F Length = 711 Score = 179 bits (454), Expect = 1e-43 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%) Frame = +1 Query: 4 LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ ++ PKDE L P + ++ R F ++P+HYNL LR+ +Q NRHRL C VG Sbjct: 200 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 259 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSR+W I RL + A+NCDYS FDGLLN Q I N INKLY ++ Sbjct: 260 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 313 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 R N+LMA+ GR++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P Sbjct: 314 SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 373 Query: 541 KCRFQQTVCLI 573 F+Q VCLI Sbjct: 374 VNNFKQEVCLI 384 [15][TOP] >UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA8_9SECO Length = 985 Score = 179 bits (454), Expect = 1e-43 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%) Frame = +1 Query: 4 LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ ++ PKDE L P + ++ R F ++P+HYNL LR+ +Q NRHRL C VG Sbjct: 474 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 533 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSR+W I RL + A+NCDYS FDGLLN Q I N INKLY ++ Sbjct: 534 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 587 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 R N+LMA+ GR++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P Sbjct: 588 SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 647 Query: 541 KCRFQQTVCLI 573 F+Q VCLI Sbjct: 648 VNNFKQEVCLI 658 [16][TOP] >UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA7_9SECO Length = 985 Score = 179 bits (454), Expect = 1e-43 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%) Frame = +1 Query: 4 LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ ++ PKDE L P + ++ R F ++P+HYNL LR+ +Q NRHRL C VG Sbjct: 474 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 533 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSR+W I RL + A+NCDYS FDGLLN Q I N INKLY ++ Sbjct: 534 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 587 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 R N+LMA+ GR++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P Sbjct: 588 SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 647 Query: 541 KCRFQQTVCLI 573 F+Q VCLI Sbjct: 648 VNNFKQEVCLI 658 [17][TOP] >UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA6_9SECO Length = 985 Score = 179 bits (454), Expect = 1e-43 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%) Frame = +1 Query: 4 LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ ++ PKDE L P + ++ R F ++P+HYNL LR+ +Q NRHRL C VG Sbjct: 474 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 533 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSR+W I RL + A+NCDYS FDGLLN Q I N INKLY ++ Sbjct: 534 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 587 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 R N+LMA+ GR++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P Sbjct: 588 SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 647 Query: 541 KCRFQQTVCLI 573 F+Q VCLI Sbjct: 648 VNNFKQEVCLI 658 [18][TOP] >UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE RASPBERRY) RepID=POL1_TORVR Length = 2197 Score = 179 bits (454), Expect = 1e-43 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%) Frame = +1 Query: 4 LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ ++ PKDE L P + ++ R F ++P+HYNL LR+ +Q NRHRL C VG Sbjct: 1686 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 1745 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSR+W I RL + A+NCDYS FDGLLN Q I N INKLY ++ Sbjct: 1746 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 1799 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 R N+LMA+ GR++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P Sbjct: 1800 SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 1859 Query: 541 KCRFQQTVCLI 573 F+Q VCLI Sbjct: 1860 VNNFKQEVCLI 1870 [19][TOP] >UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus RepID=UPI0000163D09 Length = 711 Score = 178 bits (451), Expect = 3e-43 Identities = 95/196 (48%), Positives = 122/196 (62%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI R F I+P+ YNL +R K F +F+ NR +L CQVG Sbjct: 196 LIGIECPKDEKLPLRKIYDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 255 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + L+ G N + CDY +FDGLL+ QV+ IA MIN+L G S+ Sbjct: 256 INPYSMEWTRLAGSLLSVGQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 311 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525 Q R N+LMA RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ Sbjct: 312 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 371 Query: 526 APKPEKCRFQQTVCLI 573 P+P F + V L+ Sbjct: 372 VPRPLHVNFPRMVKLV 387 [20][TOP] >UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO Length = 1858 Score = 178 bits (451), Expect = 3e-43 Identities = 95/196 (48%), Positives = 122/196 (62%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI R F I+P+ YNL +R K F +F+ NR +L CQVG Sbjct: 1343 LIGIECPKDEKLPLRKIYDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 1402 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + L+ G N + CDY +FDGLL+ QV+ IA MIN+L G S+ Sbjct: 1403 INPYSMEWTRLAGSLLSVGQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 1458 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525 Q R N+LMA RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ Sbjct: 1459 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 1518 Query: 526 APKPEKCRFQQTVCLI 573 P+P F + V L+ Sbjct: 1519 VPRPLHVNFPRMVKLV 1534 [21][TOP] >UniRef100_Q6A1M4 Polyprotein (Fragment) n=1 Tax=Squash mosaic virus RepID=Q6A1M4_9SECO Length = 243 Score = 177 bits (450), Expect = 4e-43 Identities = 94/196 (47%), Positives = 122/196 (62%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RK+ R F I+P+ YNL +R K F +F+ NR +L CQVG Sbjct: 51 LIGIECPKDEKLPLRKVYDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 110 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + L+ G N + CDY +FDGLL+ QV+ IA MIN+L G S+ Sbjct: 111 INPYSMEWTRLAGSLLSVGQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 166 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525 Q R N+LMA RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ Sbjct: 167 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 226 Query: 526 APKPEKCRFQQTVCLI 573 P+P F + V L+ Sbjct: 227 VPRPLHVNFPRMVKLV 242 [22][TOP] >UniRef100_Q1XEN9 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEN9_9SECO Length = 239 Score = 176 bits (447), Expect = 9e-43 Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 E++ +E PKDE LP RK+ RLF ++PL YN LR+K F FLQ NR RLPCQV Sbjct: 51 EIICVETPKDERLPARKVTGKPKTRLFSVLPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 110 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G N YSREW + RL N A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ Sbjct: 111 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 166 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 + R N+LMA+ R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P Sbjct: 167 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 226 Query: 538 EKCRFQQTVCLI 573 + F + V L+ Sbjct: 227 PRNHFSEYVTLL 238 [23][TOP] >UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus RepID=A2ID54_9SECO Length = 1916 Score = 176 bits (447), Expect = 9e-43 Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 E++ +E PKDE LP RK+ RLF ++PL YN LR+K F FLQ NR RLPCQV Sbjct: 1392 EIICVETPKDERLPARKVTGKPKTRLFSVLPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 1451 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G N YSREW + RL N A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ Sbjct: 1452 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 1507 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 + R N+LMA+ R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P Sbjct: 1508 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 1567 Query: 538 EKCRFQQTVCLI 573 + F + V L+ Sbjct: 1568 PRNHFNEYVTLL 1579 [24][TOP] >UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO Length = 1858 Score = 175 bits (444), Expect = 2e-42 Identities = 93/196 (47%), Positives = 121/196 (61%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RK+ R F I+P+ YNL +R K F +F+ NR +L CQVG Sbjct: 1343 LIGIECPKDEKLPLRKVFDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 1402 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + L+ N + CDY +FDGLL+ QV+ IA MIN+L G S+ Sbjct: 1403 INPYSMEWTRLAGSLLSVSQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 1458 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525 Q R N+LMA RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ Sbjct: 1459 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 1518 Query: 526 APKPEKCRFQQTVCLI 573 P+P F + V L+ Sbjct: 1519 VPRPLHVNFPRMVKLV 1534 [25][TOP] >UniRef100_Q1XEN8 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEN8_9SECO Length = 239 Score = 175 bits (443), Expect = 3e-42 Identities = 90/192 (46%), Positives = 122/192 (63%), Gaps = 1/192 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 E++ +E PKDE LP RK+ RLF +PL YN LR+K F FLQ NR RLPCQV Sbjct: 51 EIICVETPKDERLPARKVTGKPKTRLFSALPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 110 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G N YSREW + RL N A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ Sbjct: 111 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 166 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 + R N+LMA+ R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P Sbjct: 167 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 226 Query: 538 EKCRFQQTVCLI 573 + F + V L+ Sbjct: 227 PRNHFSEYVTLL 238 [26][TOP] >UniRef100_Q1XEP0 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEP0_9SECO Length = 239 Score = 174 bits (442), Expect = 3e-42 Identities = 90/192 (46%), Positives = 122/192 (63%), Gaps = 1/192 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 E++ +E PKDE LP RK+ RLF +PL YN LR+K F FLQ NR RLPCQV Sbjct: 51 EIICVETPKDERLPVRKVTGKPKTRLFSALPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 110 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G N YSREW + RL N A+NCDYS+FDGL+ Q++ CI +MIN +Y G+S+ Sbjct: 111 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 166 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 + R N+LMA+ R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P Sbjct: 167 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 226 Query: 538 EKCRFQQTVCLI 573 + F + V L+ Sbjct: 227 PRNHFSEYVTLL 238 [27][TOP] >UniRef100_A5A4Z3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cowpea mosaic virus RepID=A5A4Z3_CPMV Length = 203 Score = 174 bits (442), Expect = 3e-42 Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 1/172 (0%) Frame = +1 Query: 13 IECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189 ++ PKDE LP RK+ R F I+P+ YNL +R+K F +F+ NRHRL CQVG NP Sbjct: 7 VDFPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRHRLSCQVGINP 66 Query: 190 YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ 369 YS EW + AR+ G N+ + CDYS+FDGLL+ QV++ IA+MIN+L GE +++ A+ Sbjct: 67 YSMEWSRLAARMKEKG-NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLKNAR 123 Query: 370 RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 R N+LMA R A V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL Sbjct: 124 R-NLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKL 174 [28][TOP] >UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus RepID=Q2TCK2_9SECO Length = 709 Score = 172 bits (437), Expect = 1e-41 Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ NR+ LPCQVG Sbjct: 198 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 257 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + RL R G N + CDYS+FDGLL+ QV++ +++MIN + G SE Sbjct: 258 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMIN---SFCGGSESS 313 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R ++LMA RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + Sbjct: 314 KRKREHLLMACCSRYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 368 [29][TOP] >UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO Length = 1853 Score = 172 bits (437), Expect = 1e-41 Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ NR+ LPCQVG Sbjct: 1342 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 1401 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + RL R G N + CDYS+FDGLL+ QV++ +++MIN + G SE Sbjct: 1402 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMIN---SFCGGSESS 1457 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R ++LMA RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + Sbjct: 1458 KRKREHLLMACCSRYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1512 [30][TOP] >UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q155U1_9SECO Length = 711 Score = 172 bits (436), Expect = 2e-41 Identities = 90/191 (47%), Positives = 121/191 (63%), Gaps = 1/191 (0%) Frame = +1 Query: 4 LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ ++ PKDE L P + ++ R F ++P+HYNL LR+ +Q NRHRL C VG Sbjct: 200 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 259 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 TNPYSR+W I RL + A+NCDYS FDGLLN Q I N IN+LY ++ Sbjct: 260 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINRLY-----NDEH 313 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 R N+LMA+ GR++ GQ+V++V G+PSG ALTV++NS+FNE+LI Y YR P+ Sbjct: 314 STVRGNLLMAMYGRWSVCGQRVYEVRAGMPSGCALTVIINSLFNELLIGYVYRVTVPRSL 373 Query: 541 KCRFQQTVCLI 573 F+Q VCLI Sbjct: 374 VNNFKQEVCLI 384 [31][TOP] >UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus RepID=UPI0000163CFC Length = 712 Score = 172 bits (435), Expect = 2e-41 Identities = 89/175 (50%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI + R F ++P+ YNL +R+K F F+ NRHRL CQVG Sbjct: 194 LVGIECPKDEKLPLRKIYEKPKTRCFTVLPMEYNLVVRRKFLKFVVFIMKNRHRLSCQVG 253 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + L+ G N + CDYS+FDGLL QV+ ++ MIN+L G S ++ Sbjct: 254 INPYGMEWSRLAMSLLEKGNN-ILCCDYSSFDGLLTKQVMHLMSEMINEL--CGGSSRLK 310 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 Q QR N+LMA RYA +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ Sbjct: 311 Q-QRTNLLMACCSRYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKI 364 [32][TOP] >UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO Length = 1853 Score = 172 bits (435), Expect = 2e-41 Identities = 87/175 (49%), Positives = 118/175 (67%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ NR+ LPCQVG Sbjct: 1342 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 1401 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + RL R G N + CDYS+FDGLL+ QV++ +++MIN G SE Sbjct: 1402 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMINNF---CGGSESS 1457 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R ++LMA RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + Sbjct: 1458 KRKREHLLMACCSRYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1512 [33][TOP] >UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus (strain DG) RepID=POL1_CPSMV Length = 1858 Score = 172 bits (435), Expect = 2e-41 Identities = 89/175 (50%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI + R F ++P+ YNL +R+K F F+ NRHRL CQVG Sbjct: 1340 LVGIECPKDEKLPLRKIYEKPKTRCFTVLPMEYNLVVRRKFLKFVVFIMKNRHRLSCQVG 1399 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + L+ G N + CDYS+FDGLL QV+ ++ MIN+L G S ++ Sbjct: 1400 INPYGMEWSRLAMSLLEKGNN-ILCCDYSSFDGLLTKQVMHLMSEMINEL--CGGSSRLK 1456 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 Q QR N+LMA RYA +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ Sbjct: 1457 Q-QRTNLLMACCSRYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKI 1510 [34][TOP] >UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO Length = 1853 Score = 171 bits (432), Expect = 5e-41 Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ NR+ LPCQVG Sbjct: 1342 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 1401 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + RL R G N + CDYS+FDGLL+ QV++ +++MIN G +E Sbjct: 1402 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMINNF---CGGNESS 1457 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R ++LMA RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + Sbjct: 1458 KRKREHLLMACCSRYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1512 [35][TOP] >UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus RepID=UPI00003FE537 Length = 825 Score = 170 bits (430), Expect = 8e-41 Identities = 88/190 (46%), Positives = 118/190 (62%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 LV IE PKDE L KI+ RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 190 LVSIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 249 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NPYSREW + RL ++ NCDY FDGL+ Q++ +A MIN + + V Sbjct: 250 NPYSREWTDLYHRLAEK-SDVGYNCDYKGFDGLITEQILAVVATMINAGF----RNPVSN 304 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 QR N+LMA+ GR + G +V++ G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + Sbjct: 305 QQRSNLLMAISGRLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYR 364 Query: 544 CRFQQTVCLI 573 F + V LI Sbjct: 365 ECFDRCVVLI 374 [36][TOP] >UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW RepID=POL1_ARMVN Length = 2284 Score = 170 bits (430), Expect = 8e-41 Identities = 88/190 (46%), Positives = 118/190 (62%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 LV IE PKDE L KI+ RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 1649 LVSIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 1708 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NPYSREW + RL ++ NCDY FDGL+ Q++ +A MIN + + V Sbjct: 1709 NPYSREWTDLYHRLAEK-SDVGYNCDYKGFDGLITEQILAVVATMINAGF----RNPVSN 1763 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 QR N+LMA+ GR + G +V++ G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + Sbjct: 1764 QQRSNLLMAISGRLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYR 1823 Query: 544 CRFQQTVCLI 573 F + V LI Sbjct: 1824 ECFDRCVVLI 1833 [37][TOP] >UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV Length = 2285 Score = 169 bits (427), Expect = 2e-40 Identities = 86/190 (45%), Positives = 118/190 (62%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 L+ IE PKDE L KI+ RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 1651 LISIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 1710 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NPYSREW + RL ++ NCDY FDGL+ Q++ +A MIN Y + V Sbjct: 1711 NPYSREWTDLYHRLAEQ-SDIGYNCDYKGFDGLITEQILAVVATMINTGY----RNPVSN 1765 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 QR N+L+A+ GR + G +V++ G+PSG ALTVV+NS+FNE+L+RY ++K+ P + Sbjct: 1766 QQRSNLLLAICGRLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYR 1825 Query: 544 CRFQQTVCLI 573 F + V LI Sbjct: 1826 ECFDRCVVLI 1835 [38][TOP] >UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO Length = 1860 Score = 167 bits (423), Expect = 5e-40 Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ R LPCQVG Sbjct: 1344 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMRRRDILPCQVG 1403 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + ARL G N + CDYS+FDGLL+ QV+ +A+MIN G+S ++ Sbjct: 1404 INPYGMEWTDLAARLKSKGNN-ILCCDYSSFDGLLSKQVMAAMASMINSF--CGGDSSIK 1460 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R N+LMA RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + Sbjct: 1461 K-KRENLLMACCSRYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1514 [39][TOP] >UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO Length = 1857 Score = 166 bits (421), Expect = 9e-40 Identities = 86/178 (48%), Positives = 118/178 (66%), Gaps = 1/178 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ R LPCQVG Sbjct: 1341 LIGIECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMKRRDILPCQVG 1400 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + ARL G N + CDYS+FDGLL+ QV+ +A+MIN G++ ++ Sbjct: 1401 INPYGMEWTDLAARLKSKGNN-VLCCDYSSFDGLLSKQVMTAMASMINSF--CGGDTSIK 1457 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + +R N+LMA RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K Sbjct: 1458 R-KRENLLMACCSRYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRK 1514 [40][TOP] >UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO Length = 1860 Score = 166 bits (421), Expect = 9e-40 Identities = 86/178 (48%), Positives = 118/178 (66%), Gaps = 1/178 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ R LPCQVG Sbjct: 1344 LIGIECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMKRRDILPCQVG 1403 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + ARL G N + CDYS+FDGLL+ QV+ +A+MIN G++ ++ Sbjct: 1404 INPYGMEWTDLAARLKSKGNN-VLCCDYSSFDGLLSKQVMAAMASMINSF--CGGDTSIK 1460 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + +R N+LMA RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K Sbjct: 1461 R-KRENLLMACCSRYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRK 1517 [41][TOP] >UniRef100_Q6A2S6 Polyprotein (Fragment) n=1 Tax=Cherry leaf roll virus RepID=Q6A2S6_9SECO Length = 240 Score = 166 bits (420), Expect = 1e-39 Identities = 89/190 (46%), Positives = 120/190 (63%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 LV +E PKDE L E KI A R F ++P+ YNL LR+ FT FLQ NRHRLPC VG Sbjct: 55 LVGMEIPKDERLKESKILTPATRTFTVLPMPYNLLLRKFFGRFTAFLQGNRHRLPCAVGV 114 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NPYS EW I L + + +A+N DY +FDG LN Q+ + IA ++ +++ E Sbjct: 115 NPYSNEWTRIFDGLAQM-SPKALNGDYKSFDGKLNFQMYDAIARLLGRVH----RDESTS 169 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 RYN++MA+ RY+ G +V++V GLPSG A+TV+++S+FNEILIRYAYR + Sbjct: 170 QARYNLIMAMYARYSLCGSQVYEVRAGLPSGCAITVIMDSIFNEILIRYAYRVSVGPILR 229 Query: 544 CRFQQTVCLI 573 RF V L+ Sbjct: 230 NRFNHFVKLV 239 [42][TOP] >UniRef100_Q6A2S5 Polyprotein (Fragment) n=1 Tax=Potato black ringspot virus RepID=Q6A2S5_9SECO Length = 252 Score = 166 bits (420), Expect = 1e-39 Identities = 97/201 (48%), Positives = 125/201 (62%), Gaps = 11/201 (5%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174 E+V IECPKDELL RK+ K+G R FEI+ L N+ R+K ++ FL R LPCQ Sbjct: 52 EMVCIECPKDELLVPRKVLEKLGT-RNFEILELPKNMLFRKKFLSWASFLSEMRWCLPCQ 110 Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALS---- 342 VG REWG +L RL + A NCDYS FDGL++ QV++ I M+NK YA + Sbjct: 111 VGIVVQGREWGLLLDRLSEKNS-VAYNCDYSKFDGLMSCQVLDAIGKMVNKCYANTNPNK 169 Query: 343 -GESEVQ----QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIR 507 G EV Q R+N+LM++ GR +VF+V G+PSG ALTV++NSVFNEILIR Sbjct: 170 KGRGEVPGSPPQLARHNLLMSIFGRKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIR 229 Query: 508 YAYRKLAPKPEKCRFQQTVCL 570 Y Y+ + P PE RF+ V L Sbjct: 230 YVYKTVVPSPEFNRFETFVTL 250 [43][TOP] >UniRef100_Q6A1Z2 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus RepID=Q6A1Z2_ARMV Length = 236 Score = 166 bits (420), Expect = 1e-39 Identities = 85/190 (44%), Positives = 117/190 (61%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 L+ IE PKDE L KI+ RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 51 LISIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 110 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NPYSREW + RL ++ NCDY FDGL+ Q++ A MIN Y + V Sbjct: 111 NPYSREWTDLYHRLAEQ-SDIGYNCDYKGFDGLITEQILAVAATMINTGY----RNPVGN 165 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 QR N+L+A+ GR + G +V++ G+PSG ALTVV+NS+FNE+L+RY ++K+ P + Sbjct: 166 QQRSNLLLAICGRLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYR 225 Query: 544 CRFQQTVCLI 573 F + V L+ Sbjct: 226 ECFDRCVVLV 235 [44][TOP] >UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus RepID=POL1_GFLV Length = 2284 Score = 166 bits (419), Expect = 2e-39 Identities = 89/190 (46%), Positives = 116/190 (61%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 LV IE PKDE L KI RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 1650 LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVGI 1709 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NPYSREW + RL ++ NCDY AFDGL+ Q++ IA+MIN Y V Sbjct: 1710 NPYSREWTDLYHRLGEL-SDVGYNCDYKAFDGLITEQILSTIADMINAGY----RDPVGN 1764 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 QR N+L+A+ GR + G +V+ G+PSG ALTVV+NS+F E+L+RY ++K+ P K Sbjct: 1765 RQRKNLLLAICGRLSICGNQVYATEAGIPSGCALTVVLNSIFKELLMRYCFKKIVPPVYK 1824 Query: 544 CRFQQTVCLI 573 F + V LI Sbjct: 1825 ECFDRCVVLI 1834 [45][TOP] >UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot virus RepID=B2KL92_9SECO Length = 712 Score = 165 bits (418), Expect = 2e-39 Identities = 85/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ R LPCQVG Sbjct: 196 LIGIECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMRRRDILPCQVG 255 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPY EW + ARL G N + CDYS+FDGLL+ QV+ +A+MIN G++ ++ Sbjct: 256 INPYGMEWTDLAARLKSKGNN-ILCCDYSSFDGLLSKQVMAAMASMINSF--CGGDTSIK 312 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R N+LMA RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + Sbjct: 313 K-KRENLLMACCSRYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAI 366 [46][TOP] >UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle virus RepID=POL1_APMV Length = 729 Score = 165 bits (417), Expect = 3e-39 Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI R F I+P+ YNL +RQK F +F+ R LP QVG Sbjct: 220 LVAIECPKDEKLPLRKIYTSPKTRCFSILPMEYNLLVRQKFLHFVRFMMKRRDVLPSQVG 279 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EWG I RL G N + CDYS+FDGL+++QV+ CIA+ +N + G+ ++ Sbjct: 280 VNPYSLEWGAIARRLQEVG-NSILCCDYSSFDGLMSSQVMSCIADTMNDF--MGGDVSLK 336 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + QR N+LMA R++ V V++V G+PSGF LTVV+N +FNE+L+RY ++K+ Sbjct: 337 R-QRKNLLMACCSRFSVVKGNVWRVEGGIPSGFPLTVVMNGIFNELLVRYCFKKI 390 [47][TOP] >UniRef100_Q6A1M5 Polyprotein (Fragment) n=1 Tax=Tobacco ringspot virus RepID=Q6A1M5_TRSV Length = 254 Score = 163 bits (413), Expect = 8e-39 Identities = 95/204 (46%), Positives = 127/204 (62%), Gaps = 13/204 (6%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174 E+V IECPKDELL ERK+ K+G R FEI+ L N+ R+K + FL R LPCQ Sbjct: 52 EMVCIECPKDELLVERKVLQKLGT-RNFEILELPKNMLFRKKFLHWALFLSDMRWCLPCQ 110 Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALS---- 342 VG REWG ++ RL + A NCDYS FDGL++ QV++ I M+NK Y+ + Sbjct: 111 VGIVVQGREWGLLMDRLAAKNS-VAYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNL 169 Query: 343 ---GESEVQ----QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEIL 501 G+ E+ Q R+N+LM++ GR +VF+V G+PSG ALTV++NSVFNEIL Sbjct: 170 KKKGKGELPGSPPQLARHNLLMSIFGRKCLARSQVFEVRGGIPSGCALTVLLNSVFNEIL 229 Query: 502 IRYAYRKLAPKPEKCRFQQTVCLI 573 IRY Y+ + P PE RF+ V L+ Sbjct: 230 IRYVYKTVIPSPEFNRFETFVTLV 253 [48][TOP] >UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus RepID=Q06RG7_9SECO Length = 396 Score = 163 bits (413), Expect = 8e-39 Identities = 84/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%) Frame = +1 Query: 16 ECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ECPKDE LP RKI + R F I+P+ YNL +R++ F +F+ R LPCQVG NPY Sbjct: 1 ECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMKRRDILPCQVGINPY 60 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 EW + ARL G N + CDYS+FDGLL+ QV+ +A+MIN G++ +++ +R Sbjct: 61 GMEWTDLAARLKSKGNN-VLCCDYSSFDGLLSKQVMTAMASMINSF--CGGDTSIKR-KR 116 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 N+LMA RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K Sbjct: 117 ENLLMACCSRYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRK 170 [49][TOP] >UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus RepID=UPI0000163D04 Length = 713 Score = 162 bits (410), Expect = 2e-38 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RK+ R F I+P+ YN+ +RQ F +F+ R LPCQVG Sbjct: 196 LVGIECPKDEKLPFRKVFTKPKTRNFTILPMEYNILVRQYFLNFVRFIMKKRDVLPCQVG 255 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + +RL G N+ + CDYS+FDGLL+ Q++E +A+MIN+ G + Sbjct: 256 INPYSMEWSIVASRLKSQG-NDILCCDYSSFDGLLSKQIMEMMADMINRF---CGGGTLI 311 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 A+R N+LMA R A V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L Sbjct: 312 CAKRKNLLMACCSRLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLL 366 [50][TOP] >UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus RepID=POL1_RCMV Length = 1864 Score = 162 bits (410), Expect = 2e-38 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RK+ R F I+P+ YN+ +RQ F +F+ R LPCQVG Sbjct: 1347 LVGIECPKDEKLPFRKVFTKPKTRNFTILPMEYNILVRQYFLNFVRFIMKKRDVLPCQVG 1406 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + +RL G N+ + CDYS+FDGLL+ Q++E +A+MIN+ G + Sbjct: 1407 INPYSMEWSIVASRLKSQG-NDILCCDYSSFDGLLSKQIMEMMADMINRF---CGGGTLI 1462 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 A+R N+LMA R A V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L Sbjct: 1463 CAKRKNLLMACCSRLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLL 1517 [51][TOP] >UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO Length = 1851 Score = 161 bits (408), Expect = 3e-38 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI R F I+P+ +NL +RQK F +F+ R +L CQVG Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + RL+ G N+ + CDY++FDGL+ QV+ +A MIN +L G E Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +R ++L+A R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL Sbjct: 1452 MRERTHLLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506 [52][TOP] >UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO Length = 1851 Score = 161 bits (408), Expect = 3e-38 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI R F I+P+ +NL +RQK F +F+ R +L CQVG Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + RL+ G N+ + CDY++FDGL+ QV+ +A MIN +L G E Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +R ++L+A R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL Sbjct: 1452 MRERTHLLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506 [53][TOP] >UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO Length = 1851 Score = 161 bits (408), Expect = 3e-38 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI R F I+P+ +NL +RQK F +F+ R +L CQVG Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + RL+ G N+ + CDY++FDGL+ QV+ +A MIN +L G E Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +R ++L+A R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL Sbjct: 1452 MRERTHLLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506 [54][TOP] >UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1 RepID=UPI0000231CC7 Length = 699 Score = 159 bits (402), Expect = 1e-37 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERK-IKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK IK RLF ++P+ YNL +R+K F +F+ R LPCQV Sbjct: 194 DLYCIECVKDERLPVRKVIKEPKSRLFTVLPMSYNLAIRKKFLNFVRFIMKRRDVLPCQV 253 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSR+WG + RL+ G N + CDYS FDG L ++ IA M + + GE+ Sbjct: 254 GINPYSRQWGKVADRLLEKG-NSILCCDYSRFDGFLPKCIMVKIAEMFSNIV---GETGA 309 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 ++ Q N+++A RYA G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K Sbjct: 310 EREQTKNLMLACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWK 364 [55][TOP] >UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1 Length = 1842 Score = 159 bits (402), Expect = 1e-37 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERK-IKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK IK RLF ++P+ YNL +R+K F +F+ R LPCQV Sbjct: 1337 DLYCIECVKDERLPVRKVIKEPKSRLFTVLPMSYNLAIRKKFLNFVRFIMKRRDVLPCQV 1396 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSR+WG + RL+ G N + CDYS FDG L ++ IA M + + GE+ Sbjct: 1397 GINPYSRQWGKVADRLLEKG-NSILCCDYSRFDGFLPKCIMVKIAEMFSNIV---GETGA 1452 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 ++ Q N+++A RYA G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K Sbjct: 1453 EREQTKNLMLACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWK 1507 [56][TOP] >UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus RepID=UPI0000163CF4 Length = 710 Score = 159 bits (401), Expect = 2e-37 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI R F I+P+ +NL +RQK F +F+ R +L CQVG Sbjct: 195 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 254 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + RL+ G N+ + CDY++F GL+ QV+ +A MIN +L G E Sbjct: 255 INPYSMEWTGLANRLLSKG-NDILCCDYASFSGLITKQVMSKMAEMIN---SLCGGDEKL 310 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +R ++L+A R A + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL Sbjct: 311 MRERTHLLLACCSRMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 365 [57][TOP] >UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO Length = 1851 Score = 159 bits (401), Expect = 2e-37 Identities = 84/175 (48%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI R F I+ + +NL +RQK F +F+ R +L CQVG Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILSMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + RL+ G N+ + CDY++FDGL+ QV+ +A MIN +L G E Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +R ++L+A R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL Sbjct: 1452 MRERTHLLLACCSRMAICKKNVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506 [58][TOP] >UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain Kentucky G7) RepID=POL1_BPMV Length = 1850 Score = 159 bits (401), Expect = 2e-37 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IECPKDE LP RKI R F I+P+ +NL +RQK F +F+ R +L CQVG Sbjct: 1335 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1394 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NPYS EW + RL+ G N+ + CDY++F GL+ QV+ +A MIN +L G E Sbjct: 1395 INPYSMEWTGLANRLLSKG-NDILCCDYASFSGLITKQVMSKMAEMIN---SLCGGDEKL 1450 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +R ++L+A R A + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL Sbjct: 1451 MRERTHLLLACCSRMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1505 [59][TOP] >UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1 Length = 1842 Score = 158 bits (399), Expect = 3e-37 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ K RLF ++P+ YNL +R+K F +F+ R LPCQV Sbjct: 1337 DLYCIECVKDERLPIRKVLKEPKSRLFTVLPMSYNLAVRKKFLNFVRFIMKRRDVLPCQV 1396 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSR+WG + RL+ G N + CDYS FDG L ++ IA M + + +GES Sbjct: 1397 GINPYSRQWGKVADRLLEKG-NSILCCDYSRFDGFLPKCIMVKIAEMFSNVVGETGES-- 1453 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 + Q N+++A RYA G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K Sbjct: 1454 -REQTKNLMLACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWK 1507 [60][TOP] >UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus RepID=UPI000180D482 Length = 474 Score = 156 bits (395), Expect = 9e-37 Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP+RK+ + RLF ++P+ YNL +R+K F +F T R LPCQV Sbjct: 158 DLYCIECVKDERLPKRKVLEKPKSRLFTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQV 217 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW I +L+ G N + CDYS FDG L ++ I +I + G+++ Sbjct: 218 GVNPYSREWSRIACKLLEKG-NNILCCDYSRFDGFLPKCIMLKIGQLIG---SFMGKNDE 273 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519 + Q N+L+A GRYA + +++V G+PSGF LTV+VNS+ NEIL++YAYR Sbjct: 274 EVTQICNLLLACTGRYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYR 327 [61][TOP] >UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO Length = 1853 Score = 156 bits (395), Expect = 9e-37 Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP+RK+ + RLF ++P+ YNL +R+K F +F T R LPCQV Sbjct: 1343 DLYCIECVKDERLPKRKVLEKPKSRLFTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQV 1402 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW I +L+ G N + CDYS FDG L ++ I +I + G+++ Sbjct: 1403 GVNPYSREWSRIACKLLEKG-NNILCCDYSRFDGFLPKCIMLKIGQLIG---SFMGKNDE 1458 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519 + Q N+L+A GRYA + +++V G+PSGF LTV+VNS+ NEIL++YAYR Sbjct: 1459 EVTQICNLLLACTGRYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYR 1512 [62][TOP] >UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud Blight RepID=POL1_TRSVB Length = 2304 Score = 156 bits (394), Expect = 1e-36 Identities = 94/204 (46%), Positives = 125/204 (61%), Gaps = 13/204 (6%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174 E+V IECPKDELL ERK+ K+G R FEI+ L N+ R+K + FL R LPCQ Sbjct: 1682 EMVCIECPKDELLVERKVLQKLGT-RNFEILELPKNMLFRKKFLHWALFLSDMRWCLPCQ 1740 Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALS---- 342 VG REWG ++ RL + A NCDYS FDGL++ QV++ I M+NK Y+ + Sbjct: 1741 VGIVVQGREWGLLMDRLAAKNS-VAYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNL 1799 Query: 343 ---GESEVQ----QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEIL 501 G+ E+ Q RYN+LM++ GR +VF+V G+ G ALTV++NSVFNEIL Sbjct: 1800 KKKGKGELPGSPPQLARYNLLMSIFGRKCLARSQVFEVRGGIRRG-ALTVLLNSVFNEIL 1858 Query: 502 IRYAYRKLAPKPEKCRFQQTVCLI 573 IRY Y+ + P PE RF+ V L+ Sbjct: 1859 IRYVYKTVIPSPEFNRFETFVTLV 1882 [63][TOP] >UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO Length = 1853 Score = 155 bits (393), Expect = 2e-36 Identities = 81/174 (46%), Positives = 113/174 (64%), Gaps = 1/174 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP+RK+ + RLF ++P+ YNL +R+K F +F T R LPCQV Sbjct: 1343 DLYCIECVKDERLPKRKVLETPKSRLFTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQV 1402 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW I +L+ G N + CDYS FDG L ++ I ++I + E+EV Sbjct: 1403 GVNPYSREWSRIACKLLEKG-NNILCCDYSRFDGFLPKCIMSQIGHLIG-TFMKKDEAEV 1460 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519 +Q N+L+A GRYA + +++V G+PSGF LTV+VNS+ NEIL++YA+R Sbjct: 1461 EQI--CNLLLACSGRYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAFR 1512 [64][TOP] >UniRef100_A5A4Z4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Bean pod mottle virus RepID=A5A4Z4_9SECO Length = 197 Score = 152 bits (385), Expect = 1e-35 Identities = 80/169 (47%), Positives = 109/169 (64%), Gaps = 1/169 (0%) Frame = +1 Query: 22 PKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198 PKDE LP RKI R F I+P+ +NL +RQK F +F+ R +L CQVG NPYS Sbjct: 4 PKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVGINPYSM 63 Query: 199 EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378 EW + RL+ G N+ + CDY++FDGL+ QV+ +A MIN +L G E +R + Sbjct: 64 EWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKLMRERTH 119 Query: 379 MLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +L+A R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL Sbjct: 120 LLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 168 [65][TOP] >UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO Length = 1870 Score = 147 bits (372), Expect = 4e-34 Identities = 78/173 (45%), Positives = 108/173 (62%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1424 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW + +L+ G N + CDYS FDG L ++ I NMI +L + EV Sbjct: 1425 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMKVD---EV 1480 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 +AQ N+++A RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY Sbjct: 1481 SRAQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1533 [66][TOP] >UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus RepID=UPI0000163DD4 Length = 699 Score = 146 bits (368), Expect = 1e-33 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 194 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 253 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW + +L+ G N + CDYS FDG L ++ I NMI +L + EV Sbjct: 254 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMRVD---EV 309 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + Q N+++A RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY Sbjct: 310 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 362 [67][TOP] >UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO Length = 1870 Score = 146 bits (368), Expect = 1e-33 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1424 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW + +L+ G N + CDYS FDG L ++ I NMI +L + EV Sbjct: 1425 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMRVD---EV 1480 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + Q N+++A RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY Sbjct: 1481 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1533 [68][TOP] >UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt virus 2 RepID=B8Y619_9SECO Length = 594 Score = 146 bits (368), Expect = 1e-33 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 89 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 148 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW + +L+ G N + CDYS FDG L ++ I NMI +L + EV Sbjct: 149 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLLKVD---EV 204 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + Q N+++A RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY Sbjct: 205 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 257 [69][TOP] >UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO Length = 1870 Score = 145 bits (366), Expect = 2e-33 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1424 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW + +L+ G N + CDYS FDG L ++ I NMI +L + EV Sbjct: 1425 GVNPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMKVD---EV 1480 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 +AQ N+++A RYA + +++V G+PSGF LTV+ NS+ NEIL++YAY Sbjct: 1481 SKAQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIGNSILNEILVKYAY 1533 [70][TOP] >UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=UPI0000163DDB Length = 697 Score = 145 bits (365), Expect = 3e-33 Identities = 79/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 192 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIAIRKKFLNFVRFFMKRRDVLPAQV 251 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW I +L+ G N + CDYS FDG L V+ I MI ++ S ES Sbjct: 252 GVNPYSREWTRIANKLLSKG-NNVLCCDYSRFDGFLPKCVMNEIGEMIARVMRASDES-- 308 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + Q N+++A RYA + +++V G+PSGF LTVVVNS+ NEIL++YAY Sbjct: 309 -RTQIKNLMLACTSRYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAY 360 [71][TOP] >UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO Length = 1869 Score = 145 bits (365), Expect = 3e-33 Identities = 79/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 1364 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIAIRKKFLNFVRFFMKRRDVLPAQV 1423 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW I +L+ G N + CDYS FDG L V+ I MI ++ S ES Sbjct: 1424 GVNPYSREWTRIANKLLSKG-NNVLCCDYSRFDGFLPKCVMNEIGEMIARVMRASDES-- 1480 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + Q N+++A RYA + +++V G+PSGF LTVVVNS+ NEIL++YAY Sbjct: 1481 -RTQIKNLMLACTSRYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAY 1532 [72][TOP] >UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO Length = 1769 Score = 144 bits (364), Expect = 4e-33 Identities = 77/173 (44%), Positives = 106/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 1264 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1323 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW + +L+ G N + CDYS FDG L ++ I +MI KL EV Sbjct: 1324 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGDMIAKLMKAD---EV 1379 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + Q N+++A RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY Sbjct: 1380 SKTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1432 [73][TOP] >UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO Length = 1869 Score = 144 bits (362), Expect = 6e-33 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R LP QV Sbjct: 1364 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIAIRKKFLNFVRFFMKRRDVLPAQV 1423 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW I +L+ G N + CDYS FDG L V+ I +MI ++ + ES+ Sbjct: 1424 GVNPYSREWTRIANKLLSKG-NNILCCDYSRFDGFLPKCVMNEIGDMIARVMRANDESKT 1482 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 Q N+++A RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY Sbjct: 1483 QIK---NLMLACTSRYAMCNRILYRVENGIPSGFPLTVIVNSILNEILVKYAY 1532 [74][TOP] >UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO Length = 1870 Score = 142 bits (358), Expect = 2e-32 Identities = 76/173 (43%), Positives = 105/173 (60%), Gaps = 1/173 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L IEC KDE LP RK+ RLF ++P+ YN+ +R+K F +F R L QV Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLTAQV 1424 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NPYSREW + +L+ G N + CDYS FDG L ++ I NMI +L EV Sbjct: 1425 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMKTD---EV 1480 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + Q N+++A RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY Sbjct: 1481 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1533 [75][TOP] >UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus RepID=O37086_9SECO Length = 2150 Score = 141 bits (356), Expect = 3e-32 Identities = 79/180 (43%), Positives = 108/180 (60%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 +EC KDE L +RK V RLF++MP +N+ LR+ F+ F+Q NR L VGTNPY Sbjct: 1633 VECLKDECLKKRK--VATPRLFDVMPFEHNILLREYFLNFSAFIQANRIYLSACVGTNPY 1690 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 SREW + RL ++ +NCDYS FDGL++ Q+ + Q + Sbjct: 1691 SREWTTLYDRLAEY-SDTGLNCDYSKFDGLISHQISR---GWLQPSTVFLETVRKQILRV 1746 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRF 552 N+L+ +GR + G++V+ V G+PSG ALTVV+NS+FNEILIRY YRK+ P P C F Sbjct: 1747 GNLLLMFIGRRSICGRQVYMVRGGMPSGCALTVVINSIFNEILIRYVYRKVTPAP-ACNF 1805 [76][TOP] >UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus RepID=Q20LA1_9SECO Length = 533 Score = 141 bits (355), Expect = 4e-32 Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 4/195 (2%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK----VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLP 168 +L+V EC KDELL E K+ + RLF I P YN+ +RQ + ++ R L Sbjct: 327 QLIVKECAKDELLKEGKVLPSEGMPGTRLFSICPAWYNMVVRQHFVYLAESVRKRRRTLS 386 Query: 169 CQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGE 348 QVG SREW + ARL ++ CDYS FDGL+ Q++ I + +++ SG+ Sbjct: 387 SQVGIVVGSREWDDLAARLRSKKNDKMYCCDYSKFDGLMTPQIVHAITGIYERMF--SGK 444 Query: 349 SEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 + Q R N++M + R + G +V++V G+PSGFALTV NS+FNEIL+R AYR L Sbjct: 445 DGMSQF-RQNLMMGICNRISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLV 503 Query: 529 PKPEKCRFQQTVCLI 573 P+ E+ F V LI Sbjct: 504 PEIERPFFSNNVALI 518 [77][TOP] >UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain cherry RepID=POL1_RRVC Length = 2367 Score = 139 bits (350), Expect = 2e-31 Identities = 79/195 (40%), Positives = 111/195 (56%), Gaps = 4/195 (2%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK----VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLP 168 +L++ E KDELL E K+ + RLF I P YN+ +RQ + ++ R L Sbjct: 1748 QLIIKESAKDELLKEGKVLPSEGMPGTRLFSICPAWYNIVVRQHFVYIAESVRKRRRTLS 1807 Query: 169 CQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGE 348 QVG SREW + ARL ++ CDYS FDGL+ Q++ I N+ +++ SG Sbjct: 1808 SQVGIVVGSREWDDLAARLRSKKNDKMYCCDYSKFDGLMTPQIVHAITNIYERMF--SGN 1865 Query: 349 SEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 + Q R N+LM + R + G +V++V G+PSGFALTV NS+FNEIL+R AYR L Sbjct: 1866 DGMSQF-RQNLLMGICNRISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLV 1924 Query: 529 PKPEKCRFQQTVCLI 573 P+ E+ F V LI Sbjct: 1925 PEIERPFFSNNVVLI 1939 [78][TOP] >UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO Length = 2366 Score = 136 bits (343), Expect = 1e-30 Identities = 79/195 (40%), Positives = 110/195 (56%), Gaps = 4/195 (2%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK----VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLP 168 +L+V E KDELL E K+ + RLF I P YN+ +RQ + ++ R L Sbjct: 1747 QLIVKESAKDELLKEGKVLPSEGMPGTRLFSICPAWYNIVVRQHFVYVAESVRKRRRTLS 1806 Query: 169 CQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGE 348 QVG SREW + ARL ++ CDYS FDGL+ Q++ I + +++ SG+ Sbjct: 1807 SQVGIVVGSREWDDLAARLRSKKNDKMYCCDYSKFDGLMTPQIVHAITGIYERMF--SGK 1864 Query: 349 SEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 + Q R N+LM + R + G +V++V G+PSGFALTV NS+FNEIL+R AYR L Sbjct: 1865 DGMSQF-RQNLLMGICNRISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLV 1923 Query: 529 PKPEKCRFQQTVCLI 573 P E+ F V LI Sbjct: 1924 PDIERPFFSNNVVLI 1938 [79][TOP] >UniRef100_UPI0000164A2C RNA-dependent RNA polymerase n=1 Tax=Grapevine fanleaf virus RepID=UPI0000164A2C Length = 335 Score = 130 bits (327), Expect = 7e-29 Identities = 70/151 (46%), Positives = 89/151 (58%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 LV IE PKDE L KI RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 190 LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVGI 249 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NPYSREW + RL ++ NCDY AFDGL+ Q++ IA+MIN Y V Sbjct: 250 NPYSREWTDLYHRLGEL-SDVGYNCDYKAFDGLITEQILSTIADMINAGY----RDPVGN 304 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSG 456 QR N+L+A+ GR + G +V+ G+PSG Sbjct: 305 RQRKNLLLAICGRLSICGNQVYATEAGIPSG 335 [80][TOP] >UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO Length = 280 Score = 124 bits (310), Expect = 7e-27 Identities = 63/142 (44%), Positives = 89/142 (62%) Frame = +1 Query: 91 LHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSA 270 + YN+ +R+K F +F R LP QVG NPYSREW + +L+ G N + CDYS Sbjct: 1 MSYNIVIRKKFLNFVRFFMKRRDVLPAQVGINPYSREWTRMANKLLSKGNN-ILCCDYSR 59 Query: 271 FDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLP 450 FDG L ++ I NMI +L + EV +AQ N+++A RYA + +++V G+P Sbjct: 60 FDGFLPKCIMNEIGNMIARLMKVD---EVSKAQIKNLMLACTSRYAMCNRVLYRVENGIP 116 Query: 451 SGFALTVVVNSVFNEILIRYAY 516 SGF LTV+VNS+ NEIL++YAY Sbjct: 117 SGFPLTVIVNSILNEILVKYAY 138 [81][TOP] >UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus RepID=Q3YC01_9SECO Length = 795 Score = 123 bits (309), Expect = 9e-27 Identities = 66/177 (37%), Positives = 103/177 (58%), Gaps = 3/177 (1%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ +ECPKDE + +K+ RLF ++P YNL +R+ F + P +VG Sbjct: 294 LIGVECPKDERVARKKVTTKPKTRLFTVLPFEYNLLVREYFMDFVSKYMQRHNECPGKVG 353 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EW ++ L GTN N D+ FDG+ V+ + INKLY G+++ Sbjct: 354 INPQSIEWTNLYENLRSKGTNW-FNGDFERFDGITPRDVMVQLVIRINKLYK-RGDADRP 411 Query: 361 QAQRYNMLMALVG--RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 A + L+ L+ RYA G+ ++KV+CG+PSGF+LTV+VNS+ NE +R+A++++ Sbjct: 412 LANKVRSLLMLMASDRYAIAGRNLYKVSCGIPSGFSLTVIVNSLVNEFFLRFAWKRI 468 [82][TOP] >UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU Length = 2155 Score = 119 bits (298), Expect = 2e-25 Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 1/180 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +L +C KDE LP KI RLFEI+P HYN+ +R+ F+ L ++ + +PC+V Sbjct: 1299 DLFTTQCAKDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMSSHNAIPCKV 1358 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P S EW +LA R +N + DYS+FDG + + ++++ Y + S Sbjct: 1359 GIDPTSSEWS-LLANGFRAVSNIGFSADYSSFDGRAPVFIFQWFCDLVDDYYGSATGSPE 1417 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 A R+ +LM Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P Sbjct: 1418 SNA-RHALLMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1476 [83][TOP] >UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO Length = 2158 Score = 116 bits (291), Expect = 1e-24 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 1/180 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 ELV +C KDE LP K+ RLFEI+P HYN+ +R+ F+ L + + LPC+V Sbjct: 1296 ELVTTQCAKDERLPLEKVFGKRKTRLFEILPFHYNMLVRKYFLDFSASLMASHNALPCKV 1355 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NP EW +LA R ++ + DYS+FDG + ++++ Y S Sbjct: 1356 GINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPD 1414 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 A R+ +LM Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P Sbjct: 1415 SNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1473 [84][TOP] >UniRef100_B1PM64 Polyprotein (Fragment) n=1 Tax=Tomato torrado virus RepID=B1PM64_9SECO Length = 910 Score = 116 bits (291), Expect = 1e-24 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 1/180 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 ELV +C KDE LP K+ RLFEI+P HYN+ +R+ F+ L + + LPC+V Sbjct: 48 ELVATQCAKDERLPLEKVFGKRKTRLFEILPFHYNMLVRKYFLDFSASLMASHNALPCKV 107 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NP EW +LA R ++ + DYS+FDG + ++++ Y S Sbjct: 108 GINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPD 166 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 A R+ +LM Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P Sbjct: 167 SNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 225 [85][TOP] >UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO Length = 2158 Score = 116 bits (291), Expect = 1e-24 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 1/180 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 ELV +C KDE LP K+ RLFEI+P HYN+ +R+ F+ L + + LPC+V Sbjct: 1296 ELVTTQCAKDERLPLEKVFGKRKTRLFEILPFHYNMLVRKYFLDFSASLMASHNALPCKV 1355 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NP EW +LA R ++ + DYS+FDG + ++++ Y S Sbjct: 1356 GINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPD 1414 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 A R+ +LM Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P Sbjct: 1415 SNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1473 [86][TOP] >UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO Length = 2151 Score = 115 bits (289), Expect = 2e-24 Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 1/180 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +LV +C KDE LP KI RLFEI+P HYN+ +R+ F+ L + +PC+V Sbjct: 1297 DLVTTQCAKDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMALHNAIPCKV 1356 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P S EW +LA R ++ + DYS+FDG + +++++ Y S Sbjct: 1357 GIDPTSSEWT-LLANGFRAVSDVGFSADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPD 1415 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 A R+ +LM Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P Sbjct: 1416 SNA-RHALLMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1474 [87][TOP] >UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus RepID=A0N0G3_9VIRU Length = 1943 Score = 115 bits (289), Expect = 2e-24 Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 1/180 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +LV +C KDE LP KI RLFEI+P HYN+ +R+ F+ L + +PC+V Sbjct: 1089 DLVTTQCAKDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMALHNAIPCKV 1148 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P S EW +LA R ++ + DYS+FDG + +++++ Y S Sbjct: 1149 GIDPTSSEWT-LLANGFRAVSDVGFSADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPD 1207 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 A R+ +LM Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P Sbjct: 1208 SNA-RHALLMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1266 [88][TOP] >UniRef100_Q6A2S7 Polyprotein (Fragment) n=1 Tax=Arracacha virus B RepID=Q6A2S7_9SECO Length = 251 Score = 114 bits (285), Expect = 5e-24 Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 8/188 (4%) Frame = +1 Query: 13 IECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189 I+ PKDE + K++V RLF I+P HYNL +R+ F L + P +VG N Sbjct: 55 IDFPKDEKVMRAKVEVKPKVRLFTILPFHYNLVVRRFYLDFVARLMQKHNETPVKVGLNT 114 Query: 190 YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY------ALSGES 351 S EW H+ +L G N N DYS FDG+ V++ +A I+K Y L + Sbjct: 115 SSLEWQHLYDQLSAVGFNW-FNGDYSRFDGITPRCVLQGLAIRISKFYRQDEAQGLVPKK 173 Query: 352 EVQQAQRYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 +++ + +++L+ + RY G V+KV+ G+PSGF LTV+VNS+ N + +AYRKL Sbjct: 174 KIRTSVAHSLLLDMANSRYGIAGLGVYKVSSGIPSGFPLTVIVNSLVNSFFLHFAYRKLM 233 Query: 529 PKPEKCRF 552 + K F Sbjct: 234 SQSLKSHF 241 [89][TOP] >UniRef100_UPI0001765C94 RNA-dependent RNA polymerase n=1 Tax=Tomato marchitez virus RepID=UPI0001765C94 Length = 249 Score = 108 bits (270), Expect = 3e-22 Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 1/172 (0%) Frame = +1 Query: 25 KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201 KDE LP KI RLFEI+P HYN+ +R+ F+ L + +PC+VG +P S E Sbjct: 1 KDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMALHNAIPCKVGIDPTSSE 60 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +LA R ++ + DYS+FDG + +++++ Y S A R+ + Sbjct: 61 WT-LLANGFRAVSDVGFSADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPDSNA-RHAL 118 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 LM Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P Sbjct: 119 LMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 170 [90][TOP] >UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus RepID=UPI0000164A61 Length = 694 Score = 107 bits (268), Expect = 5e-22 Identities = 61/175 (34%), Positives = 99/175 (56%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ I C KDE ++++ V R+FEI+P HYN+ +R+ F QF+ + LPC+VG Sbjct: 199 IITIACAKDEKTKMKRVREVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVG 258 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 N YS+ W + A R + N DY+ FD ++ IA+M++ L+G+ Sbjct: 259 LNVYSKSWDTMHAEHNRFAYH--FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGREN 313 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 R N++ V R V + +++V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 314 AIVRRNLMKMAVERRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 368 [91][TOP] >UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO Length = 1915 Score = 107 bits (268), Expect = 5e-22 Identities = 61/175 (34%), Positives = 99/175 (56%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ I C KDE ++++ V R+FEI+P HYN+ +R+ F QF+ + LPC+VG Sbjct: 1420 IITIACAKDEKTKMKRVREVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVG 1479 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 N YS+ W + A R + N DY+ FD ++ IA+M++ L+G+ Sbjct: 1480 LNVYSKSWDTMHAEHNRFAYH--FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGREN 1534 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 R N++ V R V + +++V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 1535 AIVRRNLMKMAVERRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 1589 [92][TOP] >UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO Length = 2163 Score = 107 bits (266), Expect = 9e-22 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 5/194 (2%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +++ I C KDE K+ + R+FEI+P HYN+ +R+ F QF+ + LPC+V Sbjct: 1480 KIITIACAKDEKTKLIKVYEKPKTRIFEILPYHYNILVRKYYLFFMQFIMRMHNVLPCKV 1539 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NP+S++W + A R N DYS FD Q++ A++I++L A + Sbjct: 1540 GLNPFSQDWDEMHAEHTR--FEHHFNGDYSGFDTGTPRQLLLKFADLISELAA---DGRR 1594 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----L 525 + R N++ V R V +++ V G PSGFALTV++NS+ N+ + +A+RK + Sbjct: 1595 NKVIRRNLMQLAVDRRILVLAELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMSRI 1654 Query: 526 APKPEKCRFQQTVC 567 +P R +T C Sbjct: 1655 SPSMVTYRVMRTHC 1668 [93][TOP] >UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV Length = 2235 Score = 102 bits (255), Expect = 2e-20 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 9/188 (4%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ I+ PKDE + K+ + RLF I+P+ YN+ +R+ +F + T + +P +VG Sbjct: 1720 LIGIDFPKDEKVDSSKVYIKPKTRLFTILPVDYNILVRKYFLSFVSHIMTQHNTIPVKVG 1779 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY-------AL 339 + S EW + +L GTN N DYS FDG+ V++ I INK Y Sbjct: 1780 IDCLSNEWSILYHQLRSKGTN-WFNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAIT 1838 Query: 340 SGESEVQQAQRYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + ++LM + RY ++ V G+PSGF LTV+VNS+ N I ++Y Sbjct: 1839 DSNLSINSDLARSLLMDMASTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSY 1898 Query: 517 RKLAPKPE 540 KL + E Sbjct: 1899 IKLMKREE 1906 [94][TOP] >UniRef100_UPI0000163DC1 RNA-dependent RNA polymerase n=1 Tax=Maize chlorotic dwarf virus RepID=UPI0000163DC1 Length = 612 Score = 102 bits (254), Expect = 2e-20 Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 +V +ECPKDE KI + A R F I+P N+ RQ F + TNR +L CQVG Sbjct: 213 VVTVECPKDERRKLSKIYEQPATRTFTILPPEINILFRQYFGDFAAMIMTNRSKLFCQVG 272 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP + EW ++ + T+ DYS FDG+ + Q+ I ++N Y + E Sbjct: 273 INPENMEWSDLMHEFLHKSTH-GFAGDYSKFDGIGDPQIYHSITQVVNNWY---DDGEEN 328 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 R+ ++ +++ R V + +F+ G+PSGFA+TV+ NS N + A+ L Sbjct: 329 ARTRHALISSIIHREGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNL 383 [95][TOP] >UniRef100_O11979 Polyprotein n=2 Tax=Maize chlorotic dwarf virus RepID=O11979_9SECO Length = 3443 Score = 102 bits (254), Expect = 2e-20 Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 +V +ECPKDE KI + A R F I+P N+ RQ F + TNR +L CQVG Sbjct: 3044 VVTVECPKDERRKLSKIYEQPATRTFTILPPEINILFRQYFGDFAAMIMTNRSKLFCQVG 3103 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP + EW ++ + T+ DYS FDG+ + Q+ I ++N Y + E Sbjct: 3104 INPENMEWSDLMHEFLHKSTH-GFAGDYSKFDGIGDPQIYHSITQVVNNWY---DDGEEN 3159 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 R+ ++ +++ R V + +F+ G+PSGFA+TV+ NS N + A+ L Sbjct: 3160 ARTRHALISSIIHREGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNL 3214 [96][TOP] >UniRef100_B1A455 Replication-associated polyprotein (Fragment) n=1 Tax=Black raspberry necrosis virus RepID=B1A455_9SECO Length = 983 Score = 102 bits (253), Expect = 3e-20 Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 1/176 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177 +++ I C KDE K+ + R+FEI+P HYN+ +R+ F QF+ + LPC+V Sbjct: 739 KIITIACAKDEKTKLVKVYEKPKTRIFEILPYHYNILVRKYYLFFMQFIMRMHNVLPCKV 798 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G NP+S++W + A + N DYS FD Q+ +++I+ L A + Sbjct: 799 GLNPFSQDWDEMHAEHSK--FEHHFNGDYSGFDTGTPRQLSLKFSDLISDLAA---DGRR 853 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + R N++ V R V +++ V G PSGFALTV++NS+ N+ + +A+RK+ Sbjct: 854 NKVIRRNLMQLAVDRRILVLSELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKI 909 [97][TOP] >UniRef100_Q80G77 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G77_9SECO Length = 182 Score = 99.4 bits (246), Expect = 2e-19 Identities = 56/157 (35%), Positives = 89/157 (56%) Frame = +1 Query: 55 KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234 +V R+FEI+P HYN+ +R+ F QF+ + LPC+VG N YS+ W + A R Sbjct: 8 EVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRF 67 Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414 + N DY+ FD ++ IA+M++ L+G+ R N++ V R V Sbjct: 68 AYH--FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGRENAIVRRNLMKMAVERRILV 122 Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +++V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 123 LRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [98][TOP] >UniRef100_Q6EEL1 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q6EEL1_9SECO Length = 3457 Score = 99.4 bits (246), Expect = 2e-19 Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ IEC KDE KI + A R F I+P N+ RQ F + T R +L CQVG Sbjct: 3058 VITIECAKDERRKLNKIYEKPATRTFTILPPEINILFRQYFGDFAAMVMTCRAKLFCQVG 3117 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EWG ++ L T + DYS FDG+ + Q+ I ++N Y + E Sbjct: 3118 INPESMEWGDLMLGLKEKST-KGFAGDYSKFDGIGDPQIYHSITQVVNNWY---NDGEEN 3173 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 R+ ++ +++ R V + +F+ G+PSGFA+TV+ NS N + A+ L Sbjct: 3174 ATIRHALISSIIHRRGIVKEYLFQYCQGMPSGFAMTVIFNSFMNYYYLSLAWMNL 3228 [99][TOP] >UniRef100_Q5MH31 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q5MH31_9SECO Length = 3481 Score = 99.4 bits (246), Expect = 2e-19 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVG-ACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 +V +ECPKDE KI A R F I+P N+ RQ F + TNR +L CQVG Sbjct: 3082 VVTVECPKDERRKLNKIYDNPATRTFTILPPEINILFRQYFGDFAAMVMTNRAKLFCQVG 3141 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP + EW ++ + +++ DYS FDG+ + Q+ I ++N Y + E Sbjct: 3142 INPENMEWSDLMHGFLSK-SSKGFAGDYSKFDGIGDPQIYHSITQVVNNWY---NDGEEN 3197 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 R+ ++ +++ R V + +F+ G+PSGFA+TV+ NS N + A+ L Sbjct: 3198 ARTRHALISSIIHREGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNL 3252 [100][TOP] >UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus RepID=UPI000043F357 Length = 707 Score = 99.0 bits (245), Expect = 2e-19 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 12/191 (6%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ I+ PKDE + K+ + RLF I+P+ YN+ +R+ + + T + +P +VG Sbjct: 192 LIGIDFPKDEKVDSSKVYIKPKTRLFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVG 251 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYA-------- 336 + S EW + +L GTN N DYS FDG+ V++ I INK Y Sbjct: 252 IDCLSNEWSILYHQLRSKGTNW-FNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAIT 310 Query: 337 ---LSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIR 507 LS S++ ++ +M RY ++ V G+PSGF LTV+VNS+ N I Sbjct: 311 DSNLSINSDLARSLLTDMAST---RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIH 367 Query: 508 YAYRKLAPKPE 540 ++Y KL + E Sbjct: 368 FSYIKLMKREE 378 [101][TOP] >UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling virus RepID=Q9YZ97_SDV Length = 872 Score = 99.0 bits (245), Expect = 2e-19 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 1/170 (0%) Frame = +1 Query: 19 CPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195 C KDE K++V R+FEI+P N+ +R+ + Q L +LP +VG N YS Sbjct: 396 CAKDEKTTSHKVRVEPKTRIFEILPFQINIIIRRYFMFWMQLLMAAHDQLPSKVGLNVYS 455 Query: 196 REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375 W +L R R + DYS FD ++ I + IN+L +G+SE+ Q R Sbjct: 456 ESWDILLGRHTRLANH--FTGDYSGFDTSTPRILVYAIVDKINEL---AGDSEMNQRTRR 510 Query: 376 NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 N++ ++ RY V++++ G PSGFA TV++NS+ NE +++++ L Sbjct: 511 NIIRFVLNRYLISDGYVYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGL 560 [102][TOP] >UniRef100_Q80G75 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G75_9SECO Length = 182 Score = 99.0 bits (245), Expect = 2e-19 Identities = 55/152 (36%), Positives = 87/152 (57%) Frame = +1 Query: 70 RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249 R+FEI+P HYN+ +R+ F QF+ + LPC+VG N YS+ W + A R + Sbjct: 13 RIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRFAYH-- 70 Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429 N DY+ FD ++ IA+M++ L+G+ R N++ V R V + ++ Sbjct: 71 FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGRENAIVRRNLMKMAVKRRILVLRDLY 127 Query: 430 KVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 128 QVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [103][TOP] >UniRef100_Q80G71 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G71_9SECO Length = 182 Score = 99.0 bits (245), Expect = 2e-19 Identities = 56/160 (35%), Positives = 91/160 (56%) Frame = +1 Query: 55 KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234 +V R+FEI+P HYN+ +R+ F QF+ + LPC+VG N YS+ W + A R Sbjct: 8 EVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDSLPCKVGLNVYSKSWDTMHAEHNRF 67 Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414 + N DY+ FD ++ IA+M+++L E+ + R N++ V R V Sbjct: 68 AYH--FNGDYTGFDTATPRVLMMRIADMVSELACDGRENAI---VRRNLMRMAVERRILV 122 Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + +++V G PSGFALTV++NSV N+ + +A+RK+ + Sbjct: 123 LRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKITSR 162 [104][TOP] >UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV Length = 2250 Score = 99.0 bits (245), Expect = 2e-19 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 12/191 (6%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ I+ PKDE + K+ + RLF I+P+ YN+ +R+ + + T + +P +VG Sbjct: 1735 LIGIDFPKDEKVDSSKVYIKPKTRLFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVG 1794 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYA-------- 336 + S EW + +L GTN N DYS FDG+ V++ I INK Y Sbjct: 1795 IDCLSNEWSILYHQLRSKGTNW-FNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAIT 1853 Query: 337 ---LSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIR 507 LS S++ ++ +M RY ++ V G+PSGF LTV+VNS+ N I Sbjct: 1854 DSNLSINSDLARSLLTDMAST---RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIH 1910 Query: 508 YAYRKLAPKPE 540 ++Y KL + E Sbjct: 1911 FSYIKLMKREE 1921 [105][TOP] >UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus RepID=UPI00004FF342 Length = 675 Score = 98.6 bits (244), Expect = 3e-19 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 +V ++ KDE LP KI RLF I+P+ YN +R+ +F L + +P +VG Sbjct: 195 IVGLDTAKDERLPLSKIYQDVKTRLFTILPMEYNYLVRKYFGSFVAELMKLHNCIPTKVG 254 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP +W + ++ GTN N DYS FDG+ ++ I+N I KLY + Sbjct: 255 INPLGYDWTILGKKMHAKGTNW-FNGDYSRFDGVTPRCLLIEISNRITKLYG-----DEH 308 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R ++++A R G +++V+ G+P GFALTV+VNS+ N L+R+++ + Sbjct: 309 RERRLHLMLAATTRLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHM 363 [106][TOP] >UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus RepID=Q5G2U4_9SECO Length = 2227 Score = 98.6 bits (244), Expect = 3e-19 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 1/175 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 +V ++ KDE LP KI RLF I+P+ YN +R+ +F L + +P +VG Sbjct: 1747 IVGLDTAKDERLPLSKIYQDVKTRLFTILPMEYNYLVRKYFGSFVAELMKLHNCIPTKVG 1806 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP +W + ++ GTN N DYS FDG+ ++ I+N I KLY + Sbjct: 1807 INPLGYDWTILGKKMHAKGTNW-FNGDYSRFDGVTPRCLLIEISNRITKLYG-----DEH 1860 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +R ++++A R G +++V+ G+P GFALTV+VNS+ N L+R+++ + Sbjct: 1861 RERRLHLMLAATTRLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHM 1915 [107][TOP] >UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus RepID=UPI0000164A53 Length = 709 Score = 98.2 bits (243), Expect = 4e-19 Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 9/183 (4%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ I+ PKDE + K+ + RLF I+P+ YN+ +R+ +F L + +P +VG Sbjct: 192 VIGIDFPKDEKVDSSKVYIKQKTRLFTILPVDYNILVRKYFLSFVSQLMALHNEVPTKVG 251 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 +P S EW + L GTN N DYS FDG+ V++ I I++ YA + Sbjct: 252 IDPISNEWSILCHSLHSKGTN-WFNGDYSRFDGITPRNVLQGIVKRISRRYANKSSFAIT 310 Query: 361 QAQ-------RYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 ++LM + RY ++ V G+PSGF LTV+VNS+ N + +AY Sbjct: 311 DPTLSINGDLARSLLMDMCSTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAY 370 Query: 517 RKL 525 KL Sbjct: 371 MKL 373 [108][TOP] >UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus RepID=Q9JGP2_9SECO Length = 2079 Score = 98.2 bits (243), Expect = 4e-19 Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 9/183 (4%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ I+ PKDE + K+ + RLF I+P+ YN+ +R+ +F L + +P +VG Sbjct: 1562 VIGIDFPKDEKVDSSKVYIKQKTRLFTILPVDYNILVRKYFLSFVSQLMALHNEVPTKVG 1621 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 +P S EW + L GTN N DYS FDG+ V++ I I++ YA + Sbjct: 1622 IDPISNEWSILCHSLHSKGTN-WFNGDYSRFDGITPRNVLQGIVKRISRRYANKSSFAIT 1680 Query: 361 QAQ-------RYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 ++LM + RY ++ V G+PSGF LTV+VNS+ N + +AY Sbjct: 1681 DPTLSINGDLARSLLMDMCSTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAY 1740 Query: 517 RKL 525 KL Sbjct: 1741 MKL 1743 [109][TOP] >UniRef100_Q80G72 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G72_9SECO Length = 182 Score = 98.2 bits (243), Expect = 4e-19 Identities = 55/157 (35%), Positives = 90/157 (57%) Frame = +1 Query: 55 KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234 +V R+FEI+P HYN+ +R+ F QF+ + LPC+VG N YS+ W + A R Sbjct: 8 EVPKTRIFEILPFHYNILVRKYYLFFMQFVMSLHDFLPCKVGLNVYSKSWDTMHAEHNRF 67 Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414 + N DY+ FD ++ IA+M+++ L+G+ R N++ V R V Sbjct: 68 AYH--FNGDYTGFDTATPRVLMMRIADMVSE---LAGDGRENAIVRRNLMKMAVERRILV 122 Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +++V G PSGFALTV++NSV N+ + +A+R++ Sbjct: 123 LRDLYQVRGGTPSGFALTVIINSVVNQFYLMWAWRRI 159 [110][TOP] >UniRef100_B6UIR8 Polyprotein n=1 Tax=Carrot necrotic dieback virus RepID=B6UIR8_9SECO Length = 3015 Score = 97.4 bits (241), Expect = 7e-19 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 1/176 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE KI RLF I+P+ +N+ R+ F F+ NRH+ VG Sbjct: 2428 LISIECPKDERRALDKIYDKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKRGIMVG 2487 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP+SREW LA + + N D++ FDG+ + + +A + N Y Q Sbjct: 2488 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPTSFDMVAELANIFY-----GGFQ 2541 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 +R ++ AL R++ V V +++ G PSGF +TV+ NS N ++ A+ LA Sbjct: 2542 SDERTSLTKALTNRFSLVKGGVLRISGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 2597 [111][TOP] >UniRef100_Q80G70 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle virus RepID=Q80G70_9SECO Length = 182 Score = 97.1 bits (240), Expect = 9e-19 Identities = 56/157 (35%), Positives = 89/157 (56%) Frame = +1 Query: 55 KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234 +V R+FEI+P HYN+ +R+ F QF+ + LPC+VG N YS+ W + A R Sbjct: 8 EVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRF 67 Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414 + N DY+ FD ++ IA+M++ L E+ + R N++ V R V Sbjct: 68 AYH--FNGDYTGFDTATPRVLMMRIADMVSDLACDGRENAI---VRRNLMRMAVERRILV 122 Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 + +++V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 123 LRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [112][TOP] >UniRef100_Q80G73 RNA dependent RNA polymerase (Fragment) n=3 Tax=Strawberry mottle virus RepID=Q80G73_9SECO Length = 182 Score = 96.7 bits (239), Expect = 1e-18 Identities = 55/152 (36%), Positives = 87/152 (57%) Frame = +1 Query: 70 RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249 R+FEI+P HYN+ +R+ F QF+ + LPC+VG N YS+ W + A R + Sbjct: 13 RIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRFAYH-- 70 Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429 N DY+ FD ++ IA+M++ L E+ + R N++ V R V + ++ Sbjct: 71 FNGDYTGFDTATPRVLMMRIADMVSDLACDGRENAI---VRRNLMKMAVERRILVLRDLY 127 Query: 430 KVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525 +V G PSGFALTV++NSV N+ + +A+RK+ Sbjct: 128 QVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159 [113][TOP] >UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus RepID=UPI0000164A59 Length = 682 Score = 96.3 bits (238), Expect = 2e-18 Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 1/167 (0%) Frame = +1 Query: 19 CPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195 C KDE +K++V R+FEI+P N+ +R+ + Q L LP +VG N YS Sbjct: 207 CAKDEKTAPKKVRVQPKTRIFEILPFQINIIIRRYLMFWMQLLMVAHDELPSKVGINVYS 266 Query: 196 REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375 W +L R R + DYS FD ++ I + IN+L + + EV Q R Sbjct: 267 ESWDRLLGRHTRLANH--FTGDYSGFDTSTPRVLVYAIIDKINEL---ADDGEVNQRTRR 321 Query: 376 NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 N++ ++ RY +++++ G PSGFA TV++NSV NE +++++ Sbjct: 322 NIIRFVLNRYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSW 368 [114][TOP] >UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV Length = 2081 Score = 96.3 bits (238), Expect = 2e-18 Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 1/167 (0%) Frame = +1 Query: 19 CPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195 C KDE +K++V R+FEI+P N+ +R+ + Q L LP +VG N YS Sbjct: 1606 CAKDEKTAPKKVRVQPKTRIFEILPFQINIIIRRYLMFWMQLLMVAHDELPSKVGINVYS 1665 Query: 196 REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375 W +L R R + DYS FD ++ I + IN+L + + EV Q R Sbjct: 1666 ESWDRLLGRHTRLANH--FTGDYSGFDTSTPRVLVYAIIDKINEL---ADDGEVNQRTRR 1720 Query: 376 NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 N++ ++ RY +++++ G PSGFA TV++NSV NE +++++ Sbjct: 1721 NIIRFVLNRYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSW 1767 [115][TOP] >UniRef100_UPI0000167D17 RNA-dependent RNA polymerase n=1 Tax=Parsnip yellow fleck virus RepID=UPI0000167D17 Length = 813 Score = 93.2 bits (230), Expect = 1e-17 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE KI + RLF I+P+ +N+ R+ F F+ NRH+ VG Sbjct: 223 LICIECPKDERRALDKIYEKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKHGIMVG 282 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP+SREW LA + + N D++ FDG+ + ++ + N Y Sbjct: 283 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPSSFSMVSELANIFY-----GNFL 336 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 +R N+ L R++ + + +V G PSGF +TV+ NS N ++ A+ LA Sbjct: 337 STERDNLTRMLTNRFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 392 [116][TOP] >UniRef100_Q05057 Probable RNA-directed RNA polymerase n=1 Tax=Parsnip yellow fleck virus (isolate P-121) RepID=POLG_PYFV1 Length = 3027 Score = 93.2 bits (230), Expect = 1e-17 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE KI + RLF I+P+ +N+ R+ F F+ NRH+ VG Sbjct: 2437 LICIECPKDERRALDKIYEKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKHGIMVG 2496 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP+SREW LA + + N D++ FDG+ + ++ + N Y Sbjct: 2497 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPSSFSMVSELANIFY-----GNFL 2550 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 +R N+ L R++ + + +V G PSGF +TV+ NS N ++ A+ LA Sbjct: 2551 STERDNLTRMLTNRFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 2606 [117][TOP] >UniRef100_Q0PWW6 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Lettuce mottle virus RepID=Q0PWW6_9VIRU Length = 292 Score = 92.4 bits (228), Expect = 2e-17 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 1/176 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IE PKDE +KI RLF I+P+ +N+ R+ F NRH+ VG Sbjct: 68 LICIESPKDERRALKKIYTEPKTRLFSILPVEFNMHARRLYLDFNVVTMANRHKHGIMVG 127 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP+SREW LA + + N D++ FDG+ + + + ++ NK Y G+S + Sbjct: 128 INPHSREWTE-LALGLASFSPIGFNGDFANFDGMFHPDAFDMVCDLANKFY---GDS--R 181 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 A+R + AL R + V V + G PSGF +TV+ NS N ++ A+ +LA Sbjct: 182 GAERKCLTEALTNRLSLVKGSVLSIGGGGPSGFPMTVIFNSFINLFYLQAAWIQLA 237 [118][TOP] >UniRef100_UPI0000163D77 RNA-dependent RNA polymerase n=1 Tax=Rice tungro spherical virus RepID=UPI0000163D77 Length = 621 Score = 90.1 bits (222), Expect = 1e-16 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ +EC KDE KI + A R F I+ N+ RQ F + + R QVG Sbjct: 224 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 283 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EW ++ L+R T + DYS FDG+ + + I N++N Y + EV Sbjct: 284 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---NDGEVN 339 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525 R++++ ++V R G + + + G+PSGFA+TV+ NS N + A+ L Sbjct: 340 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 399 Query: 526 APKPEKCRFQQTVCLI 573 C+ T C I Sbjct: 400 LSPQGSCKDFDTYCKI 415 [119][TOP] >UniRef100_Q83034 Probable RNA-directed RNA polymerase n=2 Tax=Rice tungro spherical virus RepID=POLG_RTSVA Length = 3473 Score = 90.1 bits (222), Expect = 1e-16 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ +EC KDE KI + A R F I+ N+ RQ F + + R QVG Sbjct: 3076 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3135 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EW ++ L+R T + DYS FDG+ + + I N++N Y + EV Sbjct: 3136 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---NDGEVN 3191 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525 R++++ ++V R G + + + G+PSGFA+TV+ NS N + A+ L Sbjct: 3192 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3251 Query: 526 APKPEKCRFQQTVCLI 573 C+ T C I Sbjct: 3252 LSPQGSCKDFDTYCKI 3267 [120][TOP] >UniRef100_Q98645 ORF1 protein (Fragment) n=1 Tax=Rice tungro spherical virus RepID=Q98645_9SECO Length = 1619 Score = 89.7 bits (221), Expect = 1e-16 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ +EC KDE KI + A R F I+ N+ RQ F + + R QVG Sbjct: 1221 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 1280 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EW ++ L+R T + DYS FDG+ + + I N++N Y + EV Sbjct: 1281 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---DDGEVN 1336 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525 R++++ ++V R G + + + G+PSGFA+TV+ NS N + A+ L Sbjct: 1337 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 1396 Query: 526 APKPEKCRFQQTVCLI 573 C+ T C I Sbjct: 1397 LSPQGSCKDFDTYCKI 1412 [121][TOP] >UniRef100_Q91PP5 Probable RNA-directed RNA polymerase n=1 Tax=Rice tungro spherical virus (isolate Vt6) RepID=POLG_RTSVT Length = 3471 Score = 89.7 bits (221), Expect = 1e-16 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ +EC KDE KI + A R F I+ N+ RQ F + + R QVG Sbjct: 3073 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3132 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EW ++ L+R T + DYS FDG+ + + I N++N Y + EV Sbjct: 3133 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---DDGEVN 3188 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525 R++++ ++V R G + + + G+PSGFA+TV+ NS N + A+ L Sbjct: 3189 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3248 Query: 526 APKPEKCRFQQTVCLI 573 C+ T C I Sbjct: 3249 LSPQGSCKDFDTYCKI 3264 [122][TOP] >UniRef100_Q1MNG5 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG5_9SECO Length = 3471 Score = 87.8 bits (216), Expect = 5e-16 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ +EC KDE KI + A R F I+ N+ RQ F + + R QVG Sbjct: 3073 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3132 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EW ++ L+R T + DYS FDG+ + + I N+++ Y + EV Sbjct: 3133 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVDAWY---DDGEVN 3188 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525 R++++ ++V R G + + + G+PSGFA+TV+ NS N + A+ L Sbjct: 3189 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3248 Query: 526 APKPEKCRFQQTVCLI 573 C+ T C I Sbjct: 3249 LSPQGSCKDFDTYCKI 3264 [123][TOP] >UniRef100_Q1MNG4 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG4_9SECO Length = 3471 Score = 87.8 bits (216), Expect = 5e-16 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++ +EC KDE KI + A R F I+ N+ RQ F + + R QVG Sbjct: 3073 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3132 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP S EW ++ L+R T + DYS FDG+ + + I N+++ Y + EV Sbjct: 3133 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVDAWY---DDGEVN 3188 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525 R++++ ++V R G + + + G+PSGFA+TV+ NS N + A+ L Sbjct: 3189 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3248 Query: 526 APKPEKCRFQQTVCLI 573 C+ T C I Sbjct: 3249 LSPQGSCKDFDTYCKI 3264 [124][TOP] >UniRef100_Q91NQ2 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q91NQ2_9VIRU Length = 2107 Score = 85.9 bits (211), Expect = 2e-15 Identities = 53/164 (32%), Positives = 84/164 (51%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P +K++ R+F L LR+ +F + TNR +G N YS +W Sbjct: 1762 KDERRPLKKVQANKTRVFAASNQGLALALRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 I+ +L R G ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877 Query: 385 MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 L + KVF++N PSG LT ++N V+N I+ RY Y Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921 [125][TOP] >UniRef100_Q1LZW4 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q1LZW4_9VIRU Length = 2107 Score = 85.9 bits (211), Expect = 2e-15 Identities = 53/164 (32%), Positives = 83/164 (50%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K++ R+F L LR+ +F + TNR +G N YS +W Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALALRRYYLSFLDHVMTNRIDNEISLGVNVYSYDW 1821 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 I+ +L R G ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877 Query: 385 MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 L + KVF++N PSG LT ++N V+N I+ RY Y Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921 [126][TOP] >UniRef100_Q4JFT3 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q4JFT3_9VIRU Length = 2107 Score = 85.1 bits (209), Expect = 3e-15 Identities = 53/164 (32%), Positives = 83/164 (50%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K++ R+F L LR+ +F + TNR +G N YS +W Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALALRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 I+ +L R G ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877 Query: 385 MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 L + KVF++N PSG LT ++N V+N I+ RY Y Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921 [127][TOP] >UniRef100_Q5DM98 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q5DM98_9VIRU Length = 2107 Score = 84.3 bits (207), Expect = 6e-15 Identities = 52/164 (31%), Positives = 83/164 (50%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K++ R+F L +R+ +F + TNR +G N YS +W Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALAIRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 I+ +L R G ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877 Query: 385 MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 L + KVF++N PSG LT ++N V+N I+ RY Y Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921 [128][TOP] >UniRef100_Q09X76 Nonstructural polyprotein n=1 Tax=Taura syndrome virus RepID=Q09X76_9VIRU Length = 2107 Score = 82.8 bits (203), Expect = 2e-14 Identities = 52/164 (31%), Positives = 82/164 (50%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K++ R+F L R+ +F + TNR +G N YS +W Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALAQRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 I+ +L R G ++ I D+S FDG LN+Q++ ++ ++ Y G+ R+ +L Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877 Query: 385 MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 L + KVF++N PSG LT ++N V+N I+ RY Y Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921 [129][TOP] >UniRef100_A6NA62 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato torrado virus RepID=A6NA62_9SECO Length = 216 Score = 82.8 bits (203), Expect = 2e-14 Identities = 48/136 (35%), Positives = 72/136 (52%) Frame = +1 Query: 130 FTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECI 309 F+ L + + LPC+VG NP EW +LA R ++ + DYS+FDG + Sbjct: 1 FSASLMASHNALPCKVGINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWF 59 Query: 310 ANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVF 489 ++++ Y S A R+ +LM Y KVF++ G+PSGFALTV+ NS+ Sbjct: 60 CDLVDDYYGSPPGSPDSNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLL 118 Query: 490 NEILIRYAYRKLAPKP 537 NE +RYA+ L +P Sbjct: 119 NEFYMRYAFISLLRRP 134 [130][TOP] >UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus RepID=Q9IJX4_CRPV Length = 1771 Score = 80.5 bits (197), Expect = 9e-14 Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 13/204 (6%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 ++V ++ KDE P K+ G R+F P H+ + R+ F +L NR VG Sbjct: 1416 DVVFVDTLKDERRPIEKVDAGKTRVFSAGPQHFVVAFRKYFLPFAAYLMNNRIDNEIAVG 1475 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVI-ECIANMINKLYALSGESEV 357 TN YS +W I RL + G N+ I D+ FDG L AQ + + + Sbjct: 1476 TNVYSTDWERIAKRLKKHG-NKVIAGDFGNFDGSLVAQFFGQSCGKSFYPWFKTFNDVNT 1534 Query: 358 QQAQRYNMLMALVGRYAFV-------GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + +R LM +G + + G V+ PSG TV++N ++N +++R + Sbjct: 1535 EDGKR--NLMICIGLWTHIVHSVHSYGDNVYMWTHSQPSGNPFTVIINCLYNSMIMRIVW 1592 Query: 517 ----RKLAPKPEKC-RFQQTVCLI 573 RKLAP+ + +F++ V +I Sbjct: 1593 ILLARKLAPEMQSMKKFRENVSMI 1616 [131][TOP] >UniRef100_A5A104 Polyprotein n=1 Tax=Brevicoryne brassicae picorna-like virus RepID=A5A104_9VIRU Length = 2983 Score = 77.4 bits (189), Expect = 7e-13 Identities = 55/168 (32%), Positives = 76/168 (45%), Gaps = 1/168 (0%) Frame = +1 Query: 16 ECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 +C KD LP KIK+ G R+F I P+ + + RQ F R +G N + Sbjct: 2642 DCLKDARLPLSKIKIPGKVRVFSISPVDFTIQFRQYFLDFIASYTKARFNCEHAIGINVH 2701 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 EW LA + I DYS F LN++V+ +I K Y G S R Sbjct: 2702 GYEWSE-LAHFFEG--KKLITGDYSGFGPSLNSEVVTAAFRIICKWYKQYGCSVEDNHIR 2758 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 M L+ + +++V CGLPSG TV+ NS+ N I IR A+ Sbjct: 2759 MMMSKELINAKHLMRDYLYEVQCGLPSGNPATVIFNSIVNSIYIRCAW 2806 [132][TOP] >UniRef100_Q9WCE9 Polyprotein n=1 Tax=Sacbrood virus RepID=Q9WCE9_9VIRU Length = 2858 Score = 76.6 bits (187), Expect = 1e-12 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 1/178 (0%) Frame = +1 Query: 13 IECPKDEL-LPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189 I+ KDE LPE+ K G R+F P+ Y + +RQ F R +L VG N Sbjct: 2519 IDTLKDERKLPEKVRKYGGTRVFCNPPIDYIVSMRQYYMHFVAAFMEQRFKLMHAVGINV 2578 Query: 190 YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ 369 S EW + ++L+ G N DYS F NAQ+ + ++ + + + V + + Sbjct: 2579 QSTEWTLLASKLLAKG-NNICTIDYSNFGPGFNAQIAKAAMELMVR-WTMEHVEGVNEIE 2636 Query: 370 RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 Y +L + V +++ CG PSG +TVV+N++ N + I A+ L E+ Sbjct: 2637 AYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKER 2694 [133][TOP] >UniRef100_Q8QY61 Polyprotein n=1 Tax=Sacbrood virus RepID=Q8QY61_9VIRU Length = 2860 Score = 76.6 bits (187), Expect = 1e-12 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 1/178 (0%) Frame = +1 Query: 13 IECPKDEL-LPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189 I+ KDE LPE+ K G R+F P+ Y + +RQ F R +L VG N Sbjct: 2521 IDTLKDERKLPEKVRKYGGTRVFCNPPIDYIVSMRQYYMHFVAAFMEQRFKLMHAVGINV 2580 Query: 190 YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ 369 S EW + ++L+ G N DYS F NAQ+ + ++ + + + V + + Sbjct: 2581 QSTEWTLLASKLLAKG-NNICTIDYSNFGPGFNAQIAKAAMELMVR-WTMEHVEGVNEIE 2638 Query: 370 RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543 Y +L + V +++ CG PSG +TVV+N++ N + I A+ L E+ Sbjct: 2639 AYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKER 2696 [134][TOP] >UniRef100_O56050 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus RepID=O56050_9VIRU Length = 1998 Score = 74.3 bits (181), Expect = 6e-12 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 22/203 (10%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 E+V + KD+ + K G RLF P+HY + LR+ F L R R VG Sbjct: 1622 EIVWTDTLKDQKIAIAKANAGKTRLFSAAPMHYAIALRKVCAPFVAHLSRMRIRNTICVG 1681 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP+S EW + +L+ G + I DYS FDG L AQ++ ++ Y L+ + Sbjct: 1682 VNPFSSEWSAVAQKLLVKGPH-VIAGDYSNFDGSLPAQLVYAATEIMADWYDLNW--DYV 1738 Query: 361 QAQRYNML---MALVGRYAFV-------------------GQKVFKVNCGLPSGFALTVV 474 +A + N++ + L Y G ++ V G+PSG +T Sbjct: 1739 EAHKRNVVGGQVLLKDEYLDYLRRLYYECVHHLHIMNFKQGSLMYYVRNGIPSGCPVTAP 1798 Query: 475 VNSVFNEILIRYAYRKLAPKPEK 543 +NS+ N++ + Y + + P K Sbjct: 1799 LNSIVNQMALVYCWYHIIDDPLK 1821 [135][TOP] >UniRef100_A9QXE1 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus RepID=A9QXE1_9VIRU Length = 1998 Score = 74.3 bits (181), Expect = 6e-12 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 22/203 (10%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 E+V + KD+ + K G RLF P+HY + LR+ F L R R VG Sbjct: 1622 EIVWTDTLKDQKIAIAKANAGKTRLFSAAPMHYAIALRKVCAPFVAHLSRMRIRNTICVG 1681 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP+S EW + +L+ G + I DYS FDG L AQ++ ++ Y L+ + Sbjct: 1682 VNPFSSEWSAVAQKLLVKGPH-VIAGDYSNFDGSLPAQLVYAATEIMADWYDLNW--DYV 1738 Query: 361 QAQRYNML---MALVGRYAFV-------------------GQKVFKVNCGLPSGFALTVV 474 +A + N++ + L Y G ++ V G+PSG +T Sbjct: 1739 EAHKRNVVGGQVLLKDEYLDYLRRLYYECVHHLHIMNFKQGSLMYYVRNGIPSGCPVTAP 1798 Query: 475 VNSVFNEILIRYAYRKLAPKPEK 543 +NS+ N++ + Y + + P K Sbjct: 1799 LNSIVNQMALIYCWYHIIDDPLK 1821 [136][TOP] >UniRef100_Q5Y975 Nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 1 RepID=Q5Y975_9VIRU Length = 1396 Score = 73.2 bits (178), Expect = 1e-11 Identities = 48/168 (28%), Positives = 75/168 (44%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +NL R+ F L NR +GTN Y Sbjct: 1049 VDTLKDERRPIEKVDALKTRVFSNGPMDFNLAFRKYFLGFIAHLMENRIDNEVAIGTNVY 1108 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 SR+W + +L + G N D+S FDG LNA ++ A M N+ Y + R Sbjct: 1109 SRDWTKLAKKLKQKGKN-VFAGDFSNFDGSLNAMIMYLFARMANEFY-----DDGNDLIR 1162 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 Y ++ ++ Q + + PSG T +N + N I +R + Sbjct: 1163 YVLIEEILNSVHLCEQFFYMMTHSQPSGNPATTPLNCLINSIGLRLCF 1210 [137][TOP] >UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU Length = 1759 Score = 72.0 bits (175), Expect = 3e-11 Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 7/184 (3%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 ++ ++ KDE K+ VG R+F P H+ + RQ F +L NR VGT Sbjct: 1405 VIFVDTLKDERRDIAKVNVGKTRVFSAGPQHFVVAFRQYFLPFAAWLMHNRISNEVAVGT 1464 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 N YS +W I RL G++ I D+ FDG L AQ++ I I ++ L +++ Sbjct: 1465 NVYSSDWERIAKRLKTKGSH-VIAGDFGNFDGSLVAQILWAIFWEIFVVW-LKQFIDIEN 1522 Query: 364 AQRYNMLMALVGRYAFV-------GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 ++ +L +G ++ + V+ PSG TV++N ++N I++R ++ + Sbjct: 1523 SEGKRILCICLGLWSHLVHSVHIYEDNVYMWTHSQPSGNPFTVIINCLYNSIIMRLSWIR 1582 Query: 523 LAPK 534 + K Sbjct: 1583 VMEK 1586 [138][TOP] >UniRef100_B3TZL6 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=B3TZL6_9VIRU Length = 1950 Score = 72.0 bits (175), Expect = 3e-11 Identities = 46/168 (27%), Positives = 78/168 (46%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1612 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1671 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L + G N+ I D+S FDG LN ++E A++ N+ Y E+ + R Sbjct: 1672 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGAENSL---IR 1727 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + +LM + V+ + PSG T +N N + +R + Sbjct: 1728 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1775 [139][TOP] >UniRef100_Q80AG3 Non-structural polyprotein n=1 Tax=Kashmir bee virus RepID=Q80AG3_9VIRU Length = 1933 Score = 71.6 bits (174), Expect = 4e-11 Identities = 48/174 (27%), Positives = 80/174 (45%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1595 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1654 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L + G N+ I D+S FDG LN ++E A++ N+ Y E+ + R Sbjct: 1655 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IR 1710 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + +LM + V+ + PSG T +N N + +R + A K Sbjct: 1711 HVLLMDVYNSVHVCNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 1764 [140][TOP] >UniRef100_Q0PWW7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Dandelion yellow mosaic virus RepID=Q0PWW7_9VIRU Length = 262 Score = 71.6 bits (174), Expect = 4e-11 Identities = 45/153 (29%), Positives = 72/153 (47%) Frame = +1 Query: 70 RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249 RLF I+P+ +N+ R+ F NRH+ VG NP+SREW +A + + Sbjct: 14 RLFSILPVEFNMHARRLYLDFNVLTMANRHKHGIMVGINPHSREWTE-MAISLASFSPLG 72 Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429 N D++ FDG+ + + + Y G + + +R + +L R + V V Sbjct: 73 FNGDFANFDGMFHPDSFAMVEELATYFY--RGHNAL---ERKTLTESLTNRLSLVKGAVL 127 Query: 430 KVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 + G PSGF +TV+ NS N + A+ LA Sbjct: 128 SIGGGGPSGFPMTVIFNSYINLFYLMSAWSHLA 160 [141][TOP] >UniRef100_Q5S8C7 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=Q5S8C7_9VIRU Length = 1900 Score = 71.2 bits (173), Expect = 5e-11 Identities = 45/168 (26%), Positives = 77/168 (45%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1562 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1621 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L + G N+ I D+S FDG LN ++E A++ N+ Y + + R Sbjct: 1622 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY---DDGKENNLIR 1677 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + +LM + V+ + PSG T +N N + +R + Sbjct: 1678 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1725 [142][TOP] >UniRef100_B3TZL4 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=B3TZL4_9VIRU Length = 1950 Score = 71.2 bits (173), Expect = 5e-11 Identities = 45/168 (26%), Positives = 77/168 (45%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1612 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1671 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L + G N+ I D+S FDG LN ++E A++ N+ Y + + R Sbjct: 1672 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY---DDGKENNLIR 1727 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + +LM + V+ + PSG T +N N + +R + Sbjct: 1728 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1775 [143][TOP] >UniRef100_B3TZF0 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=B3TZF0_9VIRU Length = 1950 Score = 71.2 bits (173), Expect = 5e-11 Identities = 46/168 (27%), Positives = 78/168 (46%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1612 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1671 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L + G N+ I D+S FDG LN ++E A++ N+ Y E+ + R Sbjct: 1672 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGAENGL---IR 1727 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 + +LM + V+ + PSG T +N N + +R + Sbjct: 1728 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1775 [144][TOP] >UniRef100_Q9DSN9 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q9DSN9_9VIRU Length = 1906 Score = 70.9 bits (172), Expect = 7e-11 Identities = 47/174 (27%), Positives = 79/174 (45%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1563 VDTLKDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVY 1622 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L G + I D+S FDG LN ++E A++ N+ Y E+ + R Sbjct: 1623 SQDWNKTVRKLKTMGP-KVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGSENAL---IR 1678 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + +LM + G V+ + PSG T +N N + +R + + K Sbjct: 1679 HVLLMDVYNSTHICGDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKK 1732 [145][TOP] >UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B RepID=A7KCA2_9VIRU Length = 1614 Score = 70.9 bits (172), Expect = 7e-11 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 4/187 (2%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE + +K KVG R+F + + L +R+ +F + LQ R GT S EW Sbjct: 1146 KDEPVSFKKAKVGKTRVFTGATMDWYLIVRKYLLSFARLLQNERFAFEAAPGTIAQSLEW 1205 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 + +++ G + I DY AFD ++ + I ++I LSG + Q ++ Sbjct: 1206 HELYDYVVKNGEDRVIAGDYKAFDKRMSPKEILAAFDIIIYFCQLSGNYSEEDIQ---II 1262 Query: 385 MALVGRYAFV----GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRF 552 + AF + ++ PSG LTV++NS+ N + +RY Y L P+ F Sbjct: 1263 RCIAEDTAFALVDYNGDLVQLYGSNPSGNPLTVILNSIVNSLRMRYVYFMLNPEHTVTTF 1322 Query: 553 QQTVCLI 573 + V L+ Sbjct: 1323 KDNVNLM 1329 [146][TOP] >UniRef100_Q0PWW5 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Lettuce mottle virus RepID=Q0PWW5_9VIRU Length = 187 Score = 70.5 bits (171), Expect = 9e-11 Identities = 44/133 (33%), Positives = 69/133 (51%) Frame = +1 Query: 130 FTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECI 309 F NRH+ VG NP+SREW LA + + N D++ FDG+ + + + + Sbjct: 6 FNVVTMANRHKHGIMVGINPHSREWTE-LALGLASFSPIGFNGDFANFDGMFHPEAFDMV 64 Query: 310 ANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVF 489 ++ NK Y G+S + A+R + AL R + V V + G PSGF +TV+ NS Sbjct: 65 CDLANKFY---GDS--RGAERKCLTEALTNRLSLVKGSVLSIGGGGPSGFPMTVIFNSFI 119 Query: 490 NEILIRYAYRKLA 528 N ++ A+ +LA Sbjct: 120 NLFYLQAAWIQLA 132 [147][TOP] >UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring virus RepID=B4ZF31_9SECO Length = 73 Score = 70.5 bits (171), Expect = 9e-11 Identities = 34/41 (82%), Positives = 37/41 (90%) Frame = +1 Query: 451 SGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 573 SGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+ Sbjct: 1 SGFALTVVVNSVFNEILIRYAYKKLAPVPERNRFGSTVCLL 41 [148][TOP] >UniRef100_Q8BDE1 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q8BDE1_9VIRU Length = 1904 Score = 70.1 bits (170), Expect = 1e-10 Identities = 47/174 (27%), Positives = 79/174 (45%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1561 VDTLKDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVY 1620 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L G + I D+S FDG LN ++E A++ N+ Y E+ + R Sbjct: 1621 SQDWNKTVRKLKTMGP-KVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IR 1676 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + +LM + G V+ + PSG T +N N + +R + + K Sbjct: 1677 HVLLMDVYNSTHICGDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKK 1730 [149][TOP] >UniRef100_Q8B3M2 Polyprotein n=1 Tax=Deformed wing virus RepID=Q8B3M2_9VIRU Length = 2893 Score = 70.1 bits (170), Expect = 1e-10 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ RL + GT+ + DY F D + A E I + + + Sbjct: 2615 DVNSLEWTNLATRLSKXGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 2673 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 2674 EMKRVM-WTMAQEILAPSHLYRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 2732 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 2733 LP-LSEFSQNVVLV 2745 [150][TOP] >UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia vitripennis virus RepID=C1K2M4_9VIRU Length = 787 Score = 70.1 bits (170), Expect = 1e-10 Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 9/181 (4%) Frame = +1 Query: 19 CPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195 C KD +P KI + G R+FE+ P+ + + RQ F QT R +G NP Sbjct: 435 CLKDARIPIYKIPEPGKTRVFEMSPVDFTISQRQYFLDFYVAYQTARMNAENTIGINPDG 494 Query: 196 REWGHILARLMRPGTNEAINCDYSAFDG-LLNAQVIECIANMIN-------KLYALSGES 351 EW + RL + + DYSA+ LL++ ++ +N ++ E Sbjct: 495 PEWTELANRLQEFSPH-ILTADYSAYGPRLLHSVILRAKMAELNWYEQEEERVCMPEEER 553 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E RY M+ L+ V + + N G+PSG A TV+ NS N I IR AY LA Sbjct: 554 ERNFKIRYTMIEELINPLNIVKDCIVRFNTGMPSGNAGTVITNSECNSIYIRCAYLGLAR 613 Query: 532 K 534 K Sbjct: 614 K 614 [151][TOP] >UniRef100_Q8BDE0 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q8BDE0_9VIRU Length = 1904 Score = 69.7 bits (169), Expect = 2e-10 Identities = 47/174 (27%), Positives = 79/174 (45%) Frame = +1 Query: 13 IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192 ++ KDE P K+ R+F P+ +++ R F L NR +GTN Y Sbjct: 1561 VDTLKDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVY 1620 Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 S++W + +L G + I D+S FDG LN ++E A++ N+ Y E+ + R Sbjct: 1621 SQDWNKTVRKLKTMGP-KVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IR 1676 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + +LM + G V+ + PSG T +N N + +R + + K Sbjct: 1677 HVLLMDVYNSTHVCGDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKK 1730 [152][TOP] >UniRef100_Q7TG18 Polyprotein n=1 Tax=Deformed wing virus RepID=Q7TG18_9VIRU Length = 2893 Score = 69.3 bits (168), Expect = 2e-10 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ RL + GT+ + DY F D + A E I + + + Sbjct: 2615 DVNSLEWTNLATRLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 2673 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 2674 EMKRVM-WTMAQEILAPSHLYRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 2732 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 2733 LP-LSEFSQNVVLV 2745 [153][TOP] >UniRef100_Q6XMI0 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=Q6XMI0_9VIRU Length = 1566 Score = 69.3 bits (168), Expect = 2e-10 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 1240 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 1299 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ RL + GT+ + DY F D + A E I + + + Sbjct: 1300 DVNSLEWTNLATRLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 1358 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 1359 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 1417 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 1418 LP-LSEFSQNVVLV 1430 [154][TOP] >UniRef100_Q8B594 Nonstructural polyprotein n=1 Tax=Aphid lethal paralysis virus RepID=Q8B594_ALPV Length = 2035 Score = 68.9 bits (167), Expect = 3e-10 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 24/187 (12%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 ++ I+ KD +P K VG RLF PLHY + RQ F NR + VG Sbjct: 1659 IIWIDTLKDAKIPIAKANVGKTRLFTACPLHYTILFRQYFLPFIAHAMRNRVQNSIAVGI 1718 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363 NP S EW + RL R G I DYS FDG L Q +E +A I + + ++ Sbjct: 1719 NPMSPEWDLLAKRLKRNG-KHVIAGDYSNFDGTLPVQYVE-VAVKIMVDWFMRNWDQIVA 1776 Query: 364 AQRY-------------NMLMAL---------VGRYAFV--GQKVFKVNCGLPSGFALTV 471 A R+ LM + + ++ + ++ V G+PSG T Sbjct: 1777 ADRHVINGRELDYDEFEQFLMKIGVECINHLHIANHSDLTGAALIYYVRNGIPSGCPATA 1836 Query: 472 VVNSVFN 492 ++NS+ N Sbjct: 1837 ILNSIVN 1843 [155][TOP] >UniRef100_Q7LZW0 Polyprotein n=1 Tax=Parsnip yellow fleck virus RepID=Q7LZW0_9SECO Length = 637 Score = 68.6 bits (166), Expect = 3e-10 Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 1/176 (0%) Frame = +1 Query: 4 LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IECPKDE KI + RLF I+P+ +N+ R+ F F+ NRH+ VG Sbjct: 391 LICIECPKDERRALDKIYEKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKHGIMVG 450 Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360 NP+SREW LA + + N D++ FDG+ + SG Sbjct: 451 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPS---------------SG----- 489 Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528 + +V G PSGF +TV+ NS N ++ A+ LA Sbjct: 490 --------------------AILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 525 [156][TOP] >UniRef100_Q4QZ13 Putative polymerase (Fragment) n=1 Tax=Lettuce mottle virus RepID=Q4QZ13_9VIRU Length = 187 Score = 68.6 bits (166), Expect = 3e-10 Identities = 43/133 (32%), Positives = 67/133 (50%) Frame = +1 Query: 130 FTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECI 309 F NRH+ VG NP+SREW LA + + N D++ FDG+ + E + Sbjct: 6 FNVVTMANRHKHGIMVGINPHSREWTE-LALGLASFSPIGFNGDFANFDGMFHPDAFEMV 64 Query: 310 ANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVF 489 ++ NK Y G+S + +R + AL R + + V + G PSGF +TV+ NS Sbjct: 65 CDLANKFY---GDS--RGPERKCLTEALTNRLSLIKGSVLSIGGGGPSGFPMTVIFNSFI 119 Query: 490 NEILIRYAYRKLA 528 N ++ A+ +LA Sbjct: 120 NLFYLQAAWIQLA 132 [157][TOP] >UniRef100_Q9DSG1 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q9DSG1_9VIRU Length = 228 Score = 68.2 bits (165), Expect = 4e-10 Identities = 46/169 (27%), Positives = 77/169 (45%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIANEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLM 387 + +L + G N+ I D+S FDG LN ++E A++ N+ Y E+ + R+ +L+ Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLLV 116 Query: 388 ALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + V+ + PSG T +N N + +R + A K Sbjct: 117 DVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 165 [158][TOP] >UniRef100_Q76LW4 Polyprotein n=1 Tax=Kakugo virus RepID=Q76LW4_9VIRU Length = 2893 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 2615 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 2673 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 2674 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 2732 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 2733 LP-LSEFSQNVVLV 2745 [159][TOP] >UniRef100_Q0EDK8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK8_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYXDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [160][TOP] >UniRef100_Q0EDK3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK3_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [161][TOP] >UniRef100_Q0EDJ8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ8_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [162][TOP] >UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLXAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVXSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [163][TOP] >UniRef100_Q0EDJ6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ6_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLXAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVXSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [164][TOP] >UniRef100_Q0EDJ5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ5_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [165][TOP] >UniRef100_Q0EDI6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI6_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGXTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [166][TOP] >UniRef100_A0ZSF0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF0_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [167][TOP] >UniRef100_A0ZSE7 Polyprotein (Fragment) n=13 Tax=Kakugo virus RepID=A0ZSE7_9VIRU Length = 297 Score = 67.0 bits (162), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [168][TOP] >UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU Length = 297 Score = 66.6 bits (161), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLXAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [169][TOP] >UniRef100_Q0EDI5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI5_9VIRU Length = 297 Score = 66.6 bits (161), Expect = 1e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGVTD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [170][TOP] >UniRef100_Q7TFA5 Polyprotein n=1 Tax=Varroa destructor virus 1 RepID=Q7TFA5_9VIRU Length = 2893 Score = 66.2 bits (160), Expect = 2e-09 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + Y + Sbjct: 2615 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLN-YTEEDDK 2672 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 + + + M ++ V++V CG+PSG +T ++N++ N +LIR A++ + Sbjct: 2673 DEMKRVMWTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWQGITD 2732 Query: 532 KP 537 P Sbjct: 2733 LP 2734 [171][TOP] >UniRef100_Q0EDK9 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK9_9VIRU Length = 297 Score = 65.9 bits (159), Expect = 2e-09 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGXTD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [172][TOP] >UniRef100_Q0EDJ0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ0_9VIRU Length = 297 Score = 65.9 bits (159), Expect = 2e-09 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTHX-VTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDXKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T + N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDIXNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [173][TOP] >UniRef100_Q0EDK4 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK4_9VIRU Length = 297 Score = 65.5 bits (158), Expect = 3e-09 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNXX 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAXEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [174][TOP] >UniRef100_A0ZSF1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF1_9VIRU Length = 297 Score = 65.5 bits (158), Expect = 3e-09 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFXISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDXKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAXXILAPSHXCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 LP-LSEFSQNVVLV 192 [175][TOP] >UniRef100_Q0EDJ2 Polyprotein (Fragment) n=2 Tax=Kakugo virus RepID=Q0EDJ2_9VIRU Length = 297 Score = 65.1 bits (157), Expect = 4e-09 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVXKCRIPGKTRIFSISPVQFTIPFRQYXLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYXEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V +V CG+PSG T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVXRVPCGIPSGSPXTDILNTISNCLLIRLAWLGITD 179 Query: 532 KPEKCRFQQTVCLI 573 P F Q V L+ Sbjct: 180 XP-LSEFSQNVVLV 192 [176][TOP] >UniRef100_C1K2M5 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia vitripennis virus RepID=C1K2M5_9VIRU Length = 386 Score = 65.1 bits (157), Expect = 4e-09 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 2/161 (1%) Frame = +1 Query: 43 ERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILAR 222 E+ +K G R+F + P+ ++ LRQ T T +L+ +R +G NP EWG I+ Sbjct: 1 EKLMKPGGTRVFSMSPVTASIVLRQYTLDLTSYLRKHRISNWIGIGINPDGPEWGKIVTL 60 Query: 223 LMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYA--LSGESEVQQAQRYNMLMALV 396 L G N + D+S F LN V+ N++ Y L+ E R ++ L+ Sbjct: 61 LRTKGDN-IFSIDFSNFGPGLNINVVYEFYNLMTSFYGKYLNLTEEDGNVMRC-LIQELM 118 Query: 397 GRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519 G +++ G PSG A+TV +NS + + I ++ Sbjct: 119 YSVHLAGGTLYRTKSGSPSGAAITVEINSFVHLMYINICWQ 159 [177][TOP] >UniRef100_Q0EDK2 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK2_9VIRU Length = 297 Score = 64.7 bits (156), Expect = 5e-09 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KP 537 P Sbjct: 180 LP 181 [178][TOP] >UniRef100_Q0EDK1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK1_9VIRU Length = 297 Score = 64.7 bits (156), Expect = 5e-09 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%) Frame = +1 Query: 7 VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183 + +C KD LP K ++ G R+F I P+ + + RQ F + R +G Sbjct: 2 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61 Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351 + S EW ++ L + GT+ + DY F D + A E I + + + Sbjct: 62 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120 Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531 E+++ + M ++ V++V CG+PSG +T ++N++ N +LIR A+ + Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179 Query: 532 KP 537 P Sbjct: 180 LP 181 [179][TOP] >UniRef100_Q6QLR4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Venturia canescens picorna-like virus RepID=Q6QLR4_9PICO Length = 514 Score = 62.4 bits (150), Expect = 2e-08 Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 7/179 (3%) Frame = +1 Query: 19 CPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195 C KD +P RK+ V G+ R+FE+ P+ + RQ FT + R + +G NP Sbjct: 188 CLKDARIPNRKVSVPGSTRVFEMSPVDLTIAQRQFFMDFTVAYRVARLQAENSIGINPDG 247 Query: 196 REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375 +EW ++ L + DYS + L+ ++E + + ++ + E ++ Sbjct: 248 KEWTQLVEYLTEFSPC-ILTADYSGYGPRLSHALLERSFDA-SIVWLMDNEVCEEEEMND 305 Query: 376 NMLMALVGRYAF------VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + LV ++ V VF+ CGLPSG TV NS N + IR A+ +LA + Sbjct: 306 RCVTRLVLKHEVTHGLHVVKDLVFRPTCGLPSGNCETVERNSQTNSLYIRIAFYELAKR 364 [180][TOP] >UniRef100_Q2HWK3 Polyprotein n=1 Tax=Rhizosolenia setigera RNA virus RepID=Q2HWK3_9VIRU Length = 1605 Score = 62.0 bits (149), Expect = 3e-08 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 7/178 (3%) Frame = +1 Query: 19 CPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198 C KDE K KV R F+ P+ +R+ FL + C VG N R Sbjct: 1256 CTKDEPTKITKDKV---RCFQASPVSLQFNIRKYFLTLCHFLSSASLVSECAVGINSQGR 1312 Query: 199 EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378 W + +++ G N + D+ A+D ++A++ A + + L+G +E + Sbjct: 1313 GWHELNQHMIKYGKNRIVAGDFKAYDQHMSARMTLMAAKVFEYIAGLAGYTEEE------ 1366 Query: 379 MLMALVGRYAFVGQKVFKVNCGL-------PSGFALTVVVNSVFNEILIRYAYRKLAP 531 L + G V V +N L PSG LTV NS+ N + R A+RK+ P Sbjct: 1367 -LKIMRGASTEVSYPVMSLNGELIQLYGSNPSGQNLTVYTNSIVNSLYHRCAFRKIYP 1423 [181][TOP] >UniRef100_B4ZF24 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Arabis mosaic virus RepID=B4ZF24_ARMV Length = 113 Score = 62.0 bits (149), Expect = 3e-08 Identities = 30/59 (50%), Positives = 37/59 (62%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 L+ IE PKDE L KI+ RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 54 LISIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVG 112 [182][TOP] >UniRef100_P08545 RNA-directed RNA polymerase 3D-POL n=1 Tax=Theiler's encephalomyelitis virus (STRAIN GDVII) RepID=POLG_TMEVG Length = 2303 Score = 62.0 bits (149), Expect = 3e-08 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNR-HRLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 2001 KDEIRPLEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGFELGSAIGTDP-DVD 2059 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W A L G N + DYS FD + + EC +IN + + + A+ Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155 [183][TOP] >UniRef100_UPI0000167EF0 protein 3D n=1 Tax=Theilovirus RepID=UPI0000167EF0 Length = 461 Score = 61.6 bits (148), Expect = 4e-08 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 159 KDEIRPLEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 217 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W A L G N + DYS FD + + EC +IN + + + A+ Sbjct: 218 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 272 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 273 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 313 [184][TOP] >UniRef100_Q88595 Theilers murine encephalomyelitis virus (TMEV) complete genome n=1 Tax=Theiler's encephalomyelitis virus (STRAIN GDVII) RepID=Q88595_TMEVG Length = 2303 Score = 61.6 bits (148), Expect = 4e-08 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 2001 KDEIRPLEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W A L G N + DYS FD + + EC +IN + + + A+ Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155 [185][TOP] >UniRef100_B4ZF26 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Grapevine fanleaf virus RepID=B4ZF26_GFLV Length = 115 Score = 61.6 bits (148), Expect = 4e-08 Identities = 31/59 (52%), Positives = 36/59 (61%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IE PKDE L KI RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 55 LVCIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVG 113 [186][TOP] >UniRef100_B4ZF25 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Grapevine fanleaf virus RepID=B4ZF25_GFLV Length = 115 Score = 61.2 bits (147), Expect = 5e-08 Identities = 31/59 (52%), Positives = 36/59 (61%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IE PKDE L KI RLF ++PL YNL LR K +F++ L R LPCQVG Sbjct: 55 LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVG 113 [187][TOP] >UniRef100_Q0ZKA1 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus RepID=Q0ZKA1_9PICO Length = 2303 Score = 60.1 bits (144), Expect = 1e-07 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W L G N + DYS FD + + EC +IN + + + A+ Sbjct: 2060 WTRYAVELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155 [188][TOP] >UniRef100_O36184 Nonstructural polyprotein n=1 Tax=Plautia stali intestine virus RepID=O36184_9VIRU Length = 1811 Score = 60.1 bits (144), Expect = 1e-07 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 6/169 (3%) Frame = +1 Query: 28 DELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201 D L ERK K RLF PL Y + R L + VGTNPYS + Sbjct: 1467 DTLKDERKAIEKAHKTRLFSASPLPYLILCRMYLQGGVSRLIRGKIVNNIAVGTNPYSDD 1526 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVI----ECIANMINKLYALSGESEVQQAQ 369 W + L+R + D++++D +++ E I + L E + + Sbjct: 1527 WTRVAHHLLR--NRHFVAGDFASYDSSQEKEILRAACEVIVELCEDLSLPQSERDKHRRV 1584 Query: 370 RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516 R+ +L +L+ + K++ + LPSG LT ++NS+F I + YA+ Sbjct: 1585 RWVLLESLLNSVHYSYGKLYYWSKSLPSGHFLTSIINSIFVNIAMCYAF 1633 [189][TOP] >UniRef100_B4YYR1 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus RepID=B4YYR1_9PICO Length = 2303 Score = 60.1 bits (144), Expect = 1e-07 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI+ R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 2001 KDEIRPLEKIQEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W A L G N + DYS FD + + EC +I + + + A+ Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDAWHSTAMFEC---LIKNFFTEQNGFDRRIAEYLRS 2114 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155 [190][TOP] >UniRef100_P08544 RNA-directed RNA polymerase 3D-POL n=1 Tax=Theiler's encephalomyelitis virus (STRAIN BEAN 8386) RepID=POLG_TMEVB Length = 2303 Score = 60.1 bits (144), Expect = 1e-07 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W L G N + DYS FD + + EC +IN + + + A+ Sbjct: 2060 WTRYAVELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155 [191][TOP] >UniRef100_Q9YXM5 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q9YXM5_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [192][TOP] >UniRef100_Q9QM80 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q9QM80_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIMNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [193][TOP] >UniRef100_Q9QM13 RNA polymerase (Fragment) n=2 Tax=Dicistroviridae RepID=Q9QM13_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [194][TOP] >UniRef100_Q9INH0 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q9INH0_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [195][TOP] >UniRef100_Q9ING5 RNA polymerase (Fragment) n=2 Tax=Dicistroviridae RepID=Q9ING5_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [196][TOP] >UniRef100_Q9ING4 RNA polymerase (Fragment) n=7 Tax=Kashmir bee virus RepID=Q9ING4_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [197][TOP] >UniRef100_Q99HN7 RNA polymerase (Fragment) n=2 Tax=Kashmir bee virus RepID=Q99HN7_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIANEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [198][TOP] >UniRef100_Q99HN5 RNA polymerase (Fragment) n=4 Tax=Viruses RepID=Q99HN5_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIANEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [199][TOP] >UniRef100_Q77X60 RNA polymerase (Fragment) n=9 Tax=Kashmir bee virus RepID=Q77X60_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [200][TOP] >UniRef100_C3U5A3 Polyprotein (Fragment) n=1 Tax=Saffold virus RepID=C3U5A3_9PICO Length = 2322 Score = 59.7 bits (143), Expect = 2e-07 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 2025 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2083 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E +I + L + + + Sbjct: 2084 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTLENGFDKRIGDYFRS 2138 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 2139 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2179 [201][TOP] >UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU Length = 3085 Score = 59.7 bits (143), Expect = 2e-07 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 3/186 (1%) Frame = +1 Query: 25 KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201 KDEL P K++ G R+F + PL L R+ F Q+ +G NP S + Sbjct: 2623 KDELRPSEKLRRFGGTRVFSVPPLELVLNSRRFLLPFMDAFQSFPIEAHHAIGLNPNSGD 2682 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYAL--SGESEVQQAQRY 375 W + L+ G + DY + + + + ++I Y E++ A + Sbjct: 2683 WRRLRDTLLEKGPC-LLQMDYKNYSDAIPKECVAKAFHIIVDYYRKWHCSTVEIENALKT 2741 Query: 376 NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQ 555 L G VFKVN G+ +G +T VVNSV N IL+ Y + K+A + F+ Sbjct: 2742 LFLDTADAELLVYGD-VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIARRRASEFFK 2800 Query: 556 QTVCLI 573 T ++ Sbjct: 2801 LTYIIV 2806 [202][TOP] >UniRef100_B4YYP1 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus RepID=B4YYP1_9PICO Length = 2303 Score = 59.7 bits (143), Expect = 2e-07 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W A L G N + DYS FD + + EC +I+ + + + A+ Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LIDNFFTEQNGFDRRIAEYLRS 2114 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155 [203][TOP] >UniRef100_B3GTT2 RNA polymerase (Fragment) n=9 Tax=Dicistroviridae RepID=B3GTT2_9VIRU Length = 138 Score = 59.7 bits (143), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [204][TOP] >UniRef100_Q9E7S9 RNA polymerase (Fragment) n=8 Tax=Dicistroviridae RepID=Q9E7S9_9VIRU Length = 138 Score = 59.3 bits (142), Expect = 2e-07 Identities = 33/102 (32%), Positives = 52/102 (50%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVDQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG LN ++E A++ N+ Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101 [205][TOP] >UniRef100_B4YYP2 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus RepID=B4YYP2_9PICO Length = 2303 Score = 58.9 bits (141), Expect = 3e-07 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + + Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASRFQTTPGLELGSAIGTDP-NVD 2059 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W A L N + DYS FD + + EC +I + + + A+ Sbjct: 2060 WTRYAAELSN--FNYVYDVDYSNFDASHSTAMFEC---LIKNFFTEQNGFDKRNAEYLRS 2114 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155 [206][TOP] >UniRef100_B4ZF29 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tobacco ringspot virus RepID=B4ZF29_TRSV Length = 114 Score = 58.5 bits (140), Expect = 3e-07 Identities = 30/59 (50%), Positives = 35/59 (59%) Frame = +1 Query: 4 LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180 LV IE PKDE L KI RLF ++PL YNL LR K +F++ L R LPCQ G Sbjct: 55 LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQGG 113 [207][TOP] >UniRef100_A1XLS5 Polyprotein (Fragment) n=4 Tax=Acute bee paralysis virus RepID=A1XLS5_9VIRU Length = 139 Score = 58.5 bits (140), Expect = 3e-07 Identities = 39/135 (28%), Positives = 63/135 (46%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 4 KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 H R ++ + I D+S FDG LN ++E A++ N+ Y E+ + R+ +L Sbjct: 64 -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGSENAL---IRHVLL 119 Query: 385 MALVGRYAFVGQKVF 429 M + G V+ Sbjct: 120 MDVYNSTHICGDSVY 134 [208][TOP] >UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU Length = 3085 Score = 58.2 bits (139), Expect = 5e-07 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 3/186 (1%) Frame = +1 Query: 25 KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201 KDEL P K++ G R+F + PL L R+ F Q+ +G NP S + Sbjct: 2623 KDELRPSEKLRRFGGTRVFSVPPLELVLNSRRFLLPFMDAFQSFPIEAHHAIGLNPNSGD 2682 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYAL--SGESEVQQAQRY 375 W + L+ G + DY + + + + ++I Y E++ A + Sbjct: 2683 WRRLRDTLLEKGPC-LLQMDYKNYSDAIPKECVAKAFHIIVDYYRKWHCSTVEIENALKT 2741 Query: 376 NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQ 555 L G VFKVN G+ +G +T VVNSV N IL+ Y + K+ + F+ Sbjct: 2742 LFLDTADAELLVYGD-VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKITRRRASEFFK 2800 Query: 556 QTVCLI 573 T ++ Sbjct: 2801 LTYIIV 2806 [209][TOP] >UniRef100_UPI000165DAC1 3D n=1 Tax=Bovine rhinovirus 2 RepID=UPI000165DAC1 Length = 467 Score = 57.8 bits (138), Expect = 6e-07 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQVGTNPYSRE 201 KDE+ P K++ G R+ +++PL + +F R+ F + N + VG +P Sbjct: 163 KDEIRPSEKVRAGKTRIVDVLPLEHIIFSRKYLGRFCAAMHRNYGPNIGSAVGCDP-DVA 221 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W + AI DY+AFD + Q++ +A+ + S + RY + Sbjct: 222 WQEFGTHFSQYRNVWAI--DYTAFDSCHSTQLMSVMADEV-----FSDAYGFDERARYAV 274 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 +A+ +++ ++ GLPSG + T ++N+V N I + +A ++ P E Sbjct: 275 KSLCKTVHAYEDKRI-TIDGGLPSGCSATSILNTVLNNIYVMFALKRTYPNTE 326 [210][TOP] >UniRef100_C3U5A7 Polyprotein (Fragment) n=1 Tax=Saffold virus RepID=C3U5A7_9PICO Length = 2228 Score = 57.8 bits (138), Expect = 6e-07 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 2025 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2083 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E +I + + + + Sbjct: 2084 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTVENGFDERTGDYLRS 2138 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 2139 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2179 [211][TOP] >UniRef100_B0Z3W9 BRV2 polyprotein n=1 Tax=Bovine rhinovirus 2 RepID=B0Z3W9_9PICO Length = 2280 Score = 57.8 bits (138), Expect = 6e-07 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 1/173 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQVGTNPYSRE 201 KDE+ P K++ G R+ +++PL + +F R+ F + N + VG +P Sbjct: 1976 KDEIRPSEKVRAGKTRIVDVLPLEHIIFSRKYLGRFCAAMHRNYGPNIGSAVGCDP-DVA 2034 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W + AI DY+AFD + Q++ +A+ + S + RY + Sbjct: 2035 WQEFGTHFSQYRNVWAI--DYTAFDSCHSTQLMSVMADEV-----FSDAYGFDERARYAV 2087 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 +A+ +++ ++ GLPSG + T ++N+V N I + +A ++ P E Sbjct: 2088 KSLCKTVHAYEDKRI-TIDGGLPSGCSATSILNTVLNNIYVMFALKRTYPNTE 2139 [212][TOP] >UniRef100_A9JPF2 Polyprotein n=1 Tax=Saffold virus RepID=A9JPF2_9PICO Length = 2293 Score = 57.8 bits (138), Expect = 6e-07 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 1991 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2049 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + +IE + + E+ + + Sbjct: 2050 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMIEILIENF-----FTTENGFDEGIGDYL 2102 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 2103 RSLAVSRHAFEERRVL-VKGGLPSGCAATSMLNTIINNIVIRAA 2145 [213][TOP] >UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious flacherie virus RepID=A3RKR2_9VIRU Length = 639 Score = 57.8 bits (138), Expect = 6e-07 Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 5/188 (2%) Frame = +1 Query: 25 KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201 KDEL P K++ G R+F + PL L R+ F Q+ +G NP S + Sbjct: 177 KDELRPSEKLRRFGGTRVFSVPPLELVLNSRRFLLPFMDAFQSFPIEAHHAIGLNPNSGD 236 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W + L+ G + DY + + EC+A + + + + N Sbjct: 237 WRRLRDTLLEKGPC-LLQMDYKNYSDAIPK---ECVAKAFHIIVDYYRKWHCTTVEIENA 292 Query: 382 LMALVGRYA----FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR 549 L L A V VFKVN G+ +G +T VVNSV N IL+ Y + K+ + Sbjct: 293 LKTLFLDTADAELLVYGDVFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKITRRRASEF 352 Query: 550 FQQTVCLI 573 F+ T ++ Sbjct: 353 FKLTYIIV 360 [214][TOP] >UniRef100_A1XLT7 Polyprotein (Fragment) n=1 Tax=Acute bee paralysis virus RepID=A1XLT7_9VIRU Length = 139 Score = 57.8 bits (138), Expect = 6e-07 Identities = 39/135 (28%), Positives = 63/135 (46%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 4 KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 H R ++ + I D+S FDG LN ++E A++ N+ Y E+ + R+ +L Sbjct: 64 -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119 Query: 385 MALVGRYAFVGQKVF 429 M + G V+ Sbjct: 120 MDVYNSTHICGDSVY 134 [215][TOP] >UniRef100_A1XLT6 Polyprotein (Fragment) n=1 Tax=Acute bee paralysis virus RepID=A1XLT6_9VIRU Length = 139 Score = 57.8 bits (138), Expect = 6e-07 Identities = 39/135 (28%), Positives = 63/135 (46%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 4 KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 H R ++ + I D+S FDG LN ++E A++ N+ Y E+ + R+ +L Sbjct: 64 -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119 Query: 385 MALVGRYAFVGQKVF 429 M + G V+ Sbjct: 120 MNVYNSTHICGDSVY 134 [216][TOP] >UniRef100_A1XLS0 Polyprotein (Fragment) n=16 Tax=Acute bee paralysis virus RepID=A1XLS0_9VIRU Length = 139 Score = 57.8 bits (138), Expect = 6e-07 Identities = 39/135 (28%), Positives = 63/135 (46%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 4 KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 H R ++ + I D+S FDG LN ++E A++ N+ Y E+ + R+ +L Sbjct: 64 -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119 Query: 385 MALVGRYAFVGQKVF 429 M + G V+ Sbjct: 120 MDVYNSTHICGDSVY 134 [217][TOP] >UniRef100_B4YYR0 Polyprotein (Fragment) n=1 Tax=Vilyuisk human encephalomyelitis virus RepID=B4YYR0_9PICO Length = 1381 Score = 57.4 bits (137), Expect = 8e-07 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P + ++ RQ F QT L +GT+P + Sbjct: 1079 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTRPGLELGSAIGTDP-DVD 1137 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W A L N + DYS FD + + EC +I + + + A+ Sbjct: 1138 WTRYAAELSN--FNYVYDVDYSNFDASHSTAMFEC---LIKNFFTEQNGFDKRIAEYLRS 1192 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N ++IR A Sbjct: 1193 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 1233 [218][TOP] >UniRef100_A7KCA0 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-A RepID=A7KCA0_9VIRU Length = 1689 Score = 57.4 bits (137), Expect = 8e-07 Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 1/175 (0%) Frame = +1 Query: 19 CPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198 C KDE K KV R+FE + L +R+ + L C VG N Sbjct: 1351 CVKDEATKIGKEKV---RVFEAADWAFQLIVRKYFLPIARMLSLFPLTSECAVGVNAQGP 1407 Query: 199 EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378 EW + + + G + DYS +D + AQ+I + + G+ V + Sbjct: 1408 EWDQLARHMKKFGADRIFAGDYSKYDLRMPAQLILAAFKCLIDIAKTCGQYSVDDIKIMQ 1467 Query: 379 MLMALVGRYAFVGQKVFKVNCGL-PSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540 + + ++CG PSG LTV +N + N +L+R AY + P E Sbjct: 1468 GVATEIAYSCVSYNGDLIIHCGSNPSGQNLTVYINCIVNSLLLRCAYYHMYPAAE 1522 [219][TOP] >UniRef100_Q7T7T5 Polyprotein n=1 Tax=Heterosigma akashiwo RNA virus SOG263 RepID=Q7T7T5_HARNA Length = 2581 Score = 57.0 bits (136), Expect = 1e-06 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 1/172 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE L K+ R F ++ + +R+ C Q L+ N +GTN + ++W Sbjct: 1364 KDEALRIGKVP----RTFYAASMNVIMAVRKYFCPVLQALKANPIHAEIAIGTNAFGKDW 1419 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSG-ESEVQQAQRYNM 381 I + L T I DYS+FD NA + C ++ L S S+V + + Sbjct: 1420 ADIYSHLASHSTETVIAGDYSSFDMSHNADAVRCAMQVLLDLIDESSLYSDVDKLAARTL 1479 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537 + +L + +V + SG LT ++S N+I +R ++ + +P Sbjct: 1480 VESLGQSFLAFDGTWMQVIGWVMSGVPLTAELSSTLNQIYMRVVWKVVTQRP 1531 [220][TOP] >UniRef100_Q5S2C9 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q5S2C9_9VIRU Length = 138 Score = 57.0 bits (136), Expect = 1e-06 Identities = 32/102 (31%), Positives = 50/102 (49%) Frame = +1 Query: 28 DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207 DE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 1 DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60 Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333 + +L + G N+ I D+S FDG N ++E A++ N Y Sbjct: 61 KTVRKLTKFG-NKVIAGDFSTFDGSXNVCIMEKFADLANDFY 101 [221][TOP] >UniRef100_C3U5A5 Polyprotein (Fragment) n=1 Tax=Saffold virus RepID=C3U5A5_9PICO Length = 2318 Score = 57.0 bits (136), Expect = 1e-06 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 2025 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASKFQTNPGLDLGSAIGTDP-DTD 2083 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E +I + + + + Sbjct: 2084 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTVENGFDERIGDYLRS 2138 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 2139 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2179 [222][TOP] >UniRef100_B9A8E0 Non-structural polyprotein n=1 Tax=Chaetoceros socialis f. radians RNA virus RepID=B9A8E0_9VIRU Length = 1690 Score = 56.6 bits (135), Expect = 1e-06 Identities = 48/185 (25%), Positives = 79/185 (42%) Frame = +1 Query: 19 CPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198 C KDE K K R+F+ P+ LR+ FL ++ C VG N Sbjct: 1336 CTKDEPTKMSKTKT---RVFQAAPVSLQYNLRRSCLPVWAFLSSSPIYSECAVGVNSQGC 1392 Query: 199 EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378 W + L GTN + D+ A+D ++A+++ ++ ++ L+G S+ + Sbjct: 1393 AWNELDRFLTSFGTNRIVAGDFKAYDQHMSARMVLISYYIVEQIAKLAGYSDEECKLIRG 1452 Query: 379 MLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQ 558 M + + ++ K+ PSG TV NS+ N I R + L P+ E FQ Sbjct: 1453 MATDVAYPMMSLNGELIKLFGSNPSGQNGTVYTNSIVNSIYQRCVFFTLYPEYEG-NFQD 1511 Query: 559 TVCLI 573 V L+ Sbjct: 1512 VVHLL 1516 [223][TOP] >UniRef100_A9LNM7 Polyprotein n=1 Tax=Hepatitis A virus RepID=A9LNM7_9PICO Length = 2225 Score = 56.6 bits (135), Expect = 1e-06 Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1895 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1954 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L A Sbjct: 1955 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSATPSHFGT 2012 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N I + Y + K+ K Sbjct: 2013 A------LINTIIYSKHLLYNCCYHVYGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2065 [224][TOP] >UniRef100_A1XLS2 Polyprotein (Fragment) n=1 Tax=Acute bee paralysis virus RepID=A1XLS2_9VIRU Length = 139 Score = 56.6 bits (135), Expect = 1e-06 Identities = 39/135 (28%), Positives = 63/135 (46%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204 KDE P K+ R+F P+ +++ R F L NR +GTN YS++W Sbjct: 4 KDERRPIEKVDQLKTRVFFNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63 Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384 H R ++ + I D+S FDG LN ++E A++ N+ Y E+ + R+ +L Sbjct: 64 -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119 Query: 385 MALVGRYAFVGQKVF 429 M + G V+ Sbjct: 120 MDVYNSTHICGDSVY 134 [225][TOP] >UniRef100_UPI000175DA94 protein 3D n=1 Tax=Human TMEV-like cardiovirus RepID=UPI000175DA94 Length = 461 Score = 56.2 bits (134), Expect = 2e-06 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 159 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 217 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E +I + + + Sbjct: 218 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTTENGFDERIGDYLRS 272 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 273 L--AVSRHAFEERRVL-VKGGLPSGCAATSMLNTIINNIVIRAA 313 [226][TOP] >UniRef100_UPI000172CDE8 protein 3D n=1 Tax=Saffold virus RepID=UPI000172CDE8 Length = 461 Score = 56.2 bits (134), Expect = 2e-06 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 159 KDEIRPVEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 217 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E + + E+ + + Sbjct: 218 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEILIENF-----FTPENGFDERIGDYL 270 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 271 RSLAVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 313 [227][TOP] >UniRef100_Q8JR20 Polypeptide n=1 Tax=Foot-and-mouth disease virus - type O RepID=Q8JR20_9PICO Length = 2332 Score = 56.2 bits (134), Expect = 2e-06 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201 KDE+ P K++ G R+ +++P+ + L+ R F Q N R+ VG NP + Sbjct: 2026 KDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPRIGSAVGCNP-DVD 2084 Query: 202 WGHILARLMRPGTNEAI-----NCDYSAFDGLLNAQVIEC-IANMINKLYALSGESEVQQ 363 W R GT+ A + DYSAFD + + + + N + +E Sbjct: 2085 W-------QRYGTHFAQYRNVWDVDYSAFDANHCSDAMNIMLEEVFNTEFGFHPNAEW-- 2135 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 +L LV K V G+PSG + T ++N++ N I + YA R+ Sbjct: 2136 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2183 [228][TOP] >UniRef100_Q5PXZ5 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q5PXZ5_9VIRU Length = 130 Score = 56.2 bits (134), Expect = 2e-06 Identities = 29/88 (32%), Positives = 47/88 (53%) Frame = +1 Query: 70 RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249 R+F P+ +++ R F L NR +GTN YS++W + +L + G N+ Sbjct: 6 RVFSXGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWNKTVRKLTKFG-NKV 64 Query: 250 INCDYSAFDGLLNAQVIECIANMINKLY 333 I D+S FDG LN ++E A++ N+ Y Sbjct: 65 IAGDFSTFDGSLNVCIMEKFADLANEFY 92 [229][TOP] >UniRef100_C0MHL9 Polyprotein n=1 Tax=Saffold virus RepID=C0MHL9_9PICO Length = 2295 Score = 56.2 bits (134), Expect = 2e-06 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 1993 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2051 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E +I + + + Sbjct: 2052 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEV---LIENFFTTENGFDERIGDYLRS 2106 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 2107 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2147 [230][TOP] >UniRef100_B4ZF27 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Potato black ringspot virus RepID=B4ZF27_9SECO Length = 117 Score = 56.2 bits (134), Expect = 2e-06 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%) Frame = +1 Query: 1 ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174 E+V IECPKDELL RK+ K+G R FEI+ L N+ R+K ++ FL R LPCQ Sbjct: 56 EMVCIECPKDELLVPRKVLEKLGT-RNFEILELPKNMLFRKKFLSWASFLSEMRWCLPCQ 114 Query: 175 VG 180 VG Sbjct: 115 VG 116 [231][TOP] >UniRef100_B3FRR2 Polyprotein n=1 Tax=Human TMEV-like cardiovirus RepID=B3FRR2_9PICO Length = 2293 Score = 56.2 bits (134), Expect = 2e-06 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 1991 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2049 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E +I + + + Sbjct: 2050 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTTENGFDERIGDYLRS 2104 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 2105 L--AVSRHAFEERRVL-VKGGLPSGCAATSMLNTIINNIVIRAA 2145 [232][TOP] >UniRef100_A4ZKN2 Viral polyprotein n=1 Tax=Saffold virus RepID=A4ZKN2_9PICO Length = 2296 Score = 56.2 bits (134), Expect = 2e-06 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 1/164 (0%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 1994 KDEIRPVEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2052 Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381 W +L++ + DYS FD + + E + + E+ + + Sbjct: 2053 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEILIENF-----FTPENGFDERIGDYL 2105 Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 V R+AF ++V V GLPSG A T ++N++ N I+IR A Sbjct: 2106 RSLAVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2148 [233][TOP] >UniRef100_A6XP83 Polyprotein n=1 Tax=Foot-and-mouth disease virus - type Asia 1 RepID=A6XP83_9PICO Length = 2329 Score = 55.8 bits (133), Expect = 2e-06 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 7/173 (4%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201 KDE+LP K++ G R+ +++P+ + L+ R F Q N ++ VG NP + Sbjct: 2023 KDEILPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVD 2081 Query: 202 WGHILARLMRPGTNEA-----INCDYSAFDGLLNAQVIECI-ANMINKLYALSGESEVQQ 363 W R GT+ A + DYSAFD + + + + N + +E Sbjct: 2082 W-------QRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFNTDFGFHPNAEW-- 2132 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 +L LV K V G+PSG + T ++N++ N I + YA R+ Sbjct: 2133 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2180 [234][TOP] >UniRef100_Q9QAG7 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q9QAG7_9VIRU Length = 182 Score = 55.5 bits (132), Expect = 3e-06 Identities = 35/120 (29%), Positives = 59/120 (49%) Frame = +1 Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESE 354 +GTN YS++W + +L + G N+ I D+S FDG LN ++E A++ N+ Y E+ Sbjct: 3 IGTNVYSQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENA 61 Query: 355 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + R+ +LM + V+ + PSG T +N N + +R + A K Sbjct: 62 L---IRHVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 118 [235][TOP] >UniRef100_Q995Q1 RNA polymerase (Fragment) n=3 Tax=Kashmir bee virus RepID=Q995Q1_9VIRU Length = 182 Score = 55.5 bits (132), Expect = 3e-06 Identities = 35/120 (29%), Positives = 59/120 (49%) Frame = +1 Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESE 354 +GTN YS++W + +L + G N+ I D+S FDG LN ++E A++ N+ Y E+ Sbjct: 4 IGTNVYSQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENA 62 Query: 355 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 + R+ +LM + V+ + PSG T +N N + +R + A K Sbjct: 63 L---IRHVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 119 [236][TOP] >UniRef100_Q8BDF5 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=Q8BDF5_9VIRU Length = 128 Score = 55.5 bits (132), Expect = 3e-06 Identities = 35/127 (27%), Positives = 61/127 (48%) Frame = +1 Query: 70 RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249 R+F P+ +++ R F L NR +GTN YS++W + +L + G ++ Sbjct: 5 RVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWSKTVRKLKQMG-SKV 63 Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429 I D+S FDG LN ++E A++ N+ Y E+ + R+ +LM + G V+ Sbjct: 64 IAGDFSTFDGSLNVCIMEKFADLANEFYNDGPENAL---IRHVLLMDVYNSVHICGDSVY 120 Query: 430 KVNCGLP 450 + P Sbjct: 121 MMTHSQP 127 [237][TOP] >UniRef100_Q1KL66 Polyprotein n=1 Tax=Foot-and-mouth disease virus - type O RepID=Q1KL66_9PICO Length = 2332 Score = 55.5 bits (132), Expect = 3e-06 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201 KDE+ P K++ G R+ +++P+ + L+ R F Q N R+ VG NP + Sbjct: 2026 KDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPRIGSAVGCNP-DVD 2084 Query: 202 WGHILARLMRPGTNEAI-----NCDYSAFDGLLNAQVIECI-ANMINKLYALSGESEVQQ 363 W R GT+ A + DYSAFD + + + + N + +E Sbjct: 2085 W-------QRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFNTEFGFHPNAEW-- 2135 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 +L LV K V G+PSG + T ++N++ N I + YA R+ Sbjct: 2136 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2183 [238][TOP] >UniRef100_A5HTW1 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus RepID=A5HTW1_9VIRU Length = 124 Score = 55.5 bits (132), Expect = 3e-06 Identities = 29/88 (32%), Positives = 47/88 (53%) Frame = +1 Query: 70 RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249 R+F P+ +++ R F L NR +GTN YS++W + +L + G N+ Sbjct: 8 RVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWSKTVRKLTKFG-NKV 66 Query: 250 INCDYSAFDGLLNAQVIECIANMINKLY 333 I D+S FDG LN ++E A++ N+ Y Sbjct: 67 IAGDFSTFDGSLNVCIMEKFADLANEFY 94 [239][TOP] >UniRef100_B5SXL8 Polyprotein n=1 Tax=Rat theilovirus 1 RepID=B5SXL8_9PICO Length = 2307 Score = 55.1 bits (131), Expect = 4e-06 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 2005 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DVD 2063 Query: 202 W---GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 W H LA + DYS FD + + E +I + + + + + Sbjct: 2064 WTVFAHQLAEF-----KYVYDVDYSNFDASHSTAIFEI---LIQEFFTPQNGFDPRIGEY 2115 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N I+IR A Sbjct: 2116 LRSL--AVSRHAYEDRRVL-IRGGLPSGCAATSMINTIINNIVIRAA 2159 [240][TOP] >UniRef100_B3VTU7 Polyprotein n=1 Tax=Rat theilovirus 1 RepID=B3VTU7_9PICO Length = 2307 Score = 55.1 bits (131), Expect = 4e-06 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 2005 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DVD 2063 Query: 202 W---GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 W H LA + DYS FD + + E +I + + + + + Sbjct: 2064 WTVFAHQLAEF-----KYVYDVDYSNFDASHSTAIFEI---LIQEFFTPQNGFDPRIGEY 2115 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N I+IR A Sbjct: 2116 LRSL--AVSRHAYEDRRVL-IRGGLPSGCAATSMINTIINNIVIRAA 2159 [241][TOP] >UniRef100_Q67825 RNA-directed RNA polymerase 3D-POL n=1 Tax=Human hepatitis A virus Hu/Germany/GBM/1976 RepID=POLG_HAVGB Length = 2227 Score = 55.1 bits (131), Expect = 4e-06 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N I + Y + K+ K Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVYGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067 [242][TOP] >UniRef100_UPI0000163E76 3D mature peptide n=1 Tax=Hepatitis A virus RepID=UPI0000163E76 Length = 489 Score = 54.7 bits (130), Expect = 5e-06 Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y++ R + N + Sbjct: 159 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYSILCRMYWGPAISYFHLNPGFHTGVAI 218 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L Sbjct: 219 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 276 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N + + Y + K+ K Sbjct: 277 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNVNLYYVFSKIFGK 329 [243][TOP] >UniRef100_Q9WMA3 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WMA3_9PICO Length = 2227 Score = 54.7 bits (130), Expect = 5e-06 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N I + Y + K+ K Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067 [244][TOP] >UniRef100_Q9WMA1 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WMA1_9PICO Length = 2227 Score = 54.7 bits (130), Expect = 5e-06 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGGIMSELSGTPSHFGT 2014 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N I + Y + K+ K Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067 [245][TOP] >UniRef100_Q9WMA0 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WMA0_9PICO Length = 2227 Score = 54.7 bits (130), Expect = 5e-06 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGGIMSELSGTPSHFGT 2014 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N I + Y + K+ K Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067 [246][TOP] >UniRef100_Q9WM99 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WM99_9PICO Length = 2227 Score = 54.7 bits (130), Expect = 5e-06 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N I + Y + K+ K Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067 [247][TOP] >UniRef100_Q8QV03 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q8QV03_9PICO Length = 2227 Score = 54.7 bits (130), Expect = 5e-06 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 7/185 (3%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKIRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++ LSG Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSE---LSGTPS- 2010 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNC------GLPSGFALTVVVNSVFNEILIRYAYR 519 + AL+ + K NC +PSG T ++NS+ N I + Y + Sbjct: 2011 ------HFGTALIN--TIIYSKHLPYNCCYHVCGSMPSGSPCTALLNSIVNNINLYYVFS 2062 Query: 520 KLAPK 534 K+ K Sbjct: 2063 KIFGK 2067 [248][TOP] >UniRef100_Q80IV2 Polyprotein n=1 Tax=Theiler's-like virus of rats RepID=Q80IV2_9PICO Length = 2307 Score = 54.7 bits (130), Expect = 5e-06 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201 KDE+ P KI R+ ++ P H+ ++ RQ F QTN L +GT+P + Sbjct: 2005 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DVD 2063 Query: 202 W---GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372 W H LA + DYS FD + + E +I + + + + + Sbjct: 2064 WTVFAHQLAEF-----KYIYDVDYSNFDASHSTAIFEI---LIQEFFTPQNGFDPRIGEY 2115 Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513 L V R+A+ ++V + GLPSG A T ++N++ N I+IR A Sbjct: 2116 LRSL--AVSRHAYEDRRVL-IRGGLPSGCAATSMINTIINNIVIRAA 2159 [249][TOP] >UniRef100_Q7TD06 Polyprotein n=1 Tax=Foot-and-mouth disease virus - type O RepID=Q7TD06_9PICO Length = 2332 Score = 54.7 bits (130), Expect = 5e-06 Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 7/173 (4%) Frame = +1 Query: 25 KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201 KDE+ P K++ G R+ +++P+ + L+ R F Q N ++ VG NP + Sbjct: 2026 KDEIRPMEKVRAGKTRIVDVLPVEHTLYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVD 2084 Query: 202 WGHILARLMRPGTNEA-----INCDYSAFDGLLNAQVIECI-ANMINKLYALSGESEVQQ 363 W R GT+ A + DYSAFD + + + + N + +E Sbjct: 2085 W-------QRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFNTDFGFHPNAEW-- 2135 Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522 +L LV K V G+PSG + T ++N++ N I + YA R+ Sbjct: 2136 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2183 [250][TOP] >UniRef100_Q71FG9 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q71FG9_9PICO Length = 2227 Score = 54.7 bits (130), Expect = 5e-06 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%) Frame = +1 Query: 1 ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177 ++V CPKDEL P K+ R + PL Y + R + N + Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956 Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357 G +P R+W + ++R G + ++ D+SAFD L+ +I ++++L Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014 Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534 ++ ++ + + V +PSG T ++NS+ N I + Y + K+ K Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067