BB910042 ( RCE08943 )

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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
           RepID=UPI0000163E03
          Length = 824

 Score =  355 bits (911), Expect = 1e-96
 Identities = 173/191 (90%), Positives = 180/191 (94%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRH LPCQVG
Sbjct: 193 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHVLPCQVG 252

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
           TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLNAQVIECIA MIN+LYALSGESEVQ
Sbjct: 253 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNAQVIECIAKMINRLYALSGESEVQ 312

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
           QAQRYNMLMALVGRYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE
Sbjct: 313 QAQRYNMLMALVGRYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPE 372

Query: 541 KCRFQQTVCLI 573
           + RF Q VCL+
Sbjct: 373 RNRFNQVVCLL 383

[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  355 bits (911), Expect = 1e-96
 Identities = 173/191 (90%), Positives = 180/191 (94%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRH LPCQVG
Sbjct: 1633 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHVLPCQVG 1692

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLNAQVIECIA MIN+LYALSGESEVQ
Sbjct: 1693 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNAQVIECIAKMINRLYALSGESEVQ 1752

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
            QAQRYNMLMALVGRYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE
Sbjct: 1753 QAQRYNMLMALVGRYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPE 1812

Query: 541  KCRFQQTVCLI 573
            + RF Q VCL+
Sbjct: 1813 RNRFNQVVCLL 1823

[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  353 bits (906), Expect = 5e-96
 Identities = 171/191 (89%), Positives = 180/191 (94%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRHRLPCQVG
Sbjct: 193 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHRLPCQVG 252

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
           TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLN Q+IECIA MIN+LYALSGES+VQ
Sbjct: 253 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGESDVQ 312

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
           QAQRYNMLMALVGRYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE
Sbjct: 313 QAQRYNMLMALVGRYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPE 372

Query: 541 KCRFQQTVCLI 573
           + RF  TVCL+
Sbjct: 373 RNRFGSTVCLL 383

[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  353 bits (906), Expect = 5e-96
 Identities = 171/191 (89%), Positives = 180/191 (94%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ELVVIEC KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQ NRHRLPCQVG
Sbjct: 1635 ELVVIECTKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHRLPCQVG 1694

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSREWGH+L RLMRP TNEAINCDYS FDGLLN Q+IECIA MIN+LYALSGES+VQ
Sbjct: 1695 TNPYSREWGHMLNRLMRPKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGESDVQ 1754

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
            QAQRYNMLMALVGRYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE
Sbjct: 1755 QAQRYNMLMALVGRYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPE 1814

Query: 541  KCRFQQTVCLI 573
            + RF  TVCL+
Sbjct: 1815 RNRFGSTVCLL 1825

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI00017F0C90
          Length = 826

 Score =  308 bits (789), Expect = 2e-82
 Identities = 150/191 (78%), Positives = 162/191 (84%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           ELVVIECPKDELLP RKIKVG CRLFEIMPLHYNL LR KTCAFT FLQ NRHRLPCQVG
Sbjct: 191 ELVVIECPKDELLPARKIKVGPCRLFEIMPLHYNLLLRVKTCAFTAFLQHNRHRLPCQVG 250

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
           TNPYSREWGH+L RL R  TNEAINCDYS FDGLL  Q++E +A MIN+LY  SGESEV 
Sbjct: 251 TNPYSREWGHLLNRLRRVKTNEAINCDYSGFDGLLTPQLVEMMAKMINRLYLRSGESEVM 310

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
           QAQR NM+MAL GRYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PE
Sbjct: 311 QAQRLNMIMALCGRYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPE 370

Query: 541 KCRFQQTVCLI 573
           K  F   VCL+
Sbjct: 371 KNSFGINVCLL 381

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  308 bits (789), Expect = 2e-82
 Identities = 150/191 (78%), Positives = 162/191 (84%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ELVVIECPKDELLP RKIKVG CRLFEIMPLHYNL LR KTCAFT FLQ NRHRLPCQVG
Sbjct: 1617 ELVVIECPKDELLPARKIKVGPCRLFEIMPLHYNLLLRVKTCAFTAFLQHNRHRLPCQVG 1676

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSREWGH+L RL R  TNEAINCDYS FDGLL  Q++E +A MIN+LY  SGESEV 
Sbjct: 1677 TNPYSREWGHLLNRLRRVKTNEAINCDYSGFDGLLTPQLVEMMAKMINRLYLRSGESEVM 1736

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
            QAQR NM+MAL GRYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PE
Sbjct: 1737 QAQRLNMIMALCGRYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPE 1796

Query: 541  KCRFQQTVCLI 573
            K  F   VCL+
Sbjct: 1797 KNSFGINVCLL 1807

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI00003FE52F
          Length = 846

 Score =  230 bits (586), Expect = 7e-59
 Identities = 116/191 (60%), Positives = 141/191 (73%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           ELVVIECPKDELL   K+   ACR FEIMPLHYNLFLR+KT AF+ F Q NRH+L CQVG
Sbjct: 203 ELVVIECPKDELLKTEKVNK-ACRPFEIMPLHYNLFLREKTLAFSLFQQRNRHKLACQVG 261

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
           T  YS +W H+  RL+   ++ AINCDYS+FDGLLN+QV+ CIANMIN +Y    E+ V 
Sbjct: 262 TKAYSHDWTHMYQRLVAK-SDRAINCDYSSFDGLLNSQVVSCIANMINSMYHSPEETVVS 320

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
           + QRYNM+ AL GR A  GQ+V +V  GLPSGFALTVV+NSVFNEIL+RY ++ L   P+
Sbjct: 321 KRQRYNMINALFGRLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQ 380

Query: 541 KCRFQQTVCLI 573
           +  F   V L+
Sbjct: 381 RNSFSTYVTLL 391

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  230 bits (586), Expect = 7e-59
 Identities = 116/191 (60%), Positives = 141/191 (73%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ELVVIECPKDELL   K+   ACR FEIMPLHYNLFLR+KT AF+ F Q NRH+L CQVG
Sbjct: 1693 ELVVIECPKDELLKTEKVNK-ACRPFEIMPLHYNLFLREKTLAFSLFQQRNRHKLACQVG 1751

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            T  YS +W H+  RL+   ++ AINCDYS+FDGLLN+QV+ CIANMIN +Y    E+ V 
Sbjct: 1752 TKAYSHDWTHMYQRLVAK-SDRAINCDYSSFDGLLNSQVVSCIANMINSMYHSPEETVVS 1810

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
            + QRYNM+ AL GR A  GQ+V +V  GLPSGFALTVV+NSVFNEIL+RY ++ L   P+
Sbjct: 1811 KRQRYNMINALFGRLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQ 1870

Query: 541  KCRFQQTVCLI 573
            +  F   V L+
Sbjct: 1871 RNSFSTYVTLL 1881

[9][TOP]
>UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus
           RepID=UPI0000163D14
          Length = 711

 Score =  182 bits (462), Expect = 2e-44
 Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IECPKDE LP RK+      R F I+P+ YNL +R+K   F +F+  NRHRL CQVG
Sbjct: 195 LVGIECPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRHRLSCQVG 254

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPYS EW  + AR+   G N+ + CDYS+FDGLL+ QV++ IA+MIN+L    GE +++
Sbjct: 255 INPYSMEWSRLAARMKEKG-NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLK 311

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            A+R N+LMA   R A     V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL
Sbjct: 312 NARR-NLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKL 365

[10][TOP]
>UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus
            RepID=POL1_CPMV
          Length = 1866

 Score =  182 bits (462), Expect = 2e-44
 Identities = 94/175 (53%), Positives = 123/175 (70%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RK+      R F I+P+ YNL +R+K   F +F+  NRHRL CQVG
Sbjct: 1350 LVGIECPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRHRLSCQVG 1409

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  + AR+   G N+ + CDYS+FDGLL+ QV++ IA+MIN+L    GE +++
Sbjct: 1410 INPYSMEWSRLAARMKEKG-NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLK 1466

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
             A+R N+LMA   R A     V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL
Sbjct: 1467 NARR-NLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKL 1520

[11][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score =  181 bits (459), Expect = 4e-44
 Identities = 98/192 (51%), Positives = 129/192 (67%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           E+V IE PKDE LP RKI +    RLF I+PL +NL LR+K   F+  LQ +R  LP QV
Sbjct: 188 EMVCIETPKDECLPLRKICIKPKTRLFSILPLEFNLLLRKKFLHFSSSLQMHRDTLPTQV 247

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G NPYSREWG +L RL R  ++ AINCDY++FDGLL  Q++E I  MINK+Y     SE 
Sbjct: 248 GVNPYSREWGELLQRL-RAQSSVAINCDYASFDGLLTGQILEKIGTMINKMYI---GSEA 303

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
            + QR N+LM++V R +  G +V++V  G+PSG ALTV++NS+FNE LIR+ +R      
Sbjct: 304 SKIQRLNLLMSIVNRKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGV 363

Query: 538 EKCRFQQTVCLI 573
            + RF Q V L+
Sbjct: 364 PRERFSQYVTLL 375

[12][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score =  181 bits (459), Expect = 4e-44
 Identities = 98/192 (51%), Positives = 129/192 (67%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            E+V IE PKDE LP RKI +    RLF I+PL +NL LR+K   F+  LQ +R  LP QV
Sbjct: 1575 EMVCIETPKDECLPLRKICIKPKTRLFSILPLEFNLLLRKKFLHFSSSLQMHRDTLPTQV 1634

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREWG +L RL R  ++ AINCDY++FDGLL  Q++E I  MINK+Y     SE 
Sbjct: 1635 GVNPYSREWGELLQRL-RAQSSVAINCDYASFDGLLTGQILEKIGTMINKMYI---GSEA 1690

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
             + QR N+LM++V R +  G +V++V  G+PSG ALTV++NS+FNE LIR+ +R      
Sbjct: 1691 SKIQRLNLLMSIVNRKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGV 1750

Query: 538  EKCRFQQTVCLI 573
             + RF Q V L+
Sbjct: 1751 PRERFSQYVTLL 1762

[13][TOP]
>UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA9_9SECO
          Length = 985

 Score =  181 bits (458), Expect = 5e-44
 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4    LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ ++ PKDE L P + ++    R F ++P+HYNL LR+       F+Q NRHRL C VG
Sbjct: 474  LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSFMQVNRHRLSCAVG 533

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSR+W  I  RL    +  A+NCDYS FDGLLN Q    I N IN+LY     ++  
Sbjct: 534  TNPYSRDWTDIYQRLAEKNS-VAMNCDYSRFDGLLNYQAYVHIVNFINRLY-----NDEH 587

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
               R N+LMA+ GR++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P 
Sbjct: 588  TIVRGNLLMAMYGRWSICGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRVTVPRPL 647

Query: 541  KCRFQQTVCLI 573
               F Q VCLI
Sbjct: 648  VNNFNQEVCLI 658

[14][TOP]
>UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus
           RepID=UPI00003FE53F
          Length = 711

 Score =  179 bits (454), Expect = 1e-43
 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ ++ PKDE L P + ++    R F ++P+HYNL LR+        +Q NRHRL C VG
Sbjct: 200 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 259

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
           TNPYSR+W  I  RL    +  A+NCDYS FDGLLN Q    I N INKLY     ++  
Sbjct: 260 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 313

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
              R N+LMA+ GR++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P 
Sbjct: 314 SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 373

Query: 541 KCRFQQTVCLI 573
              F+Q VCLI
Sbjct: 374 VNNFKQEVCLI 384

[15][TOP]
>UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA8_9SECO
          Length = 985

 Score =  179 bits (454), Expect = 1e-43
 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4    LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ ++ PKDE L P + ++    R F ++P+HYNL LR+        +Q NRHRL C VG
Sbjct: 474  LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 533

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSR+W  I  RL    +  A+NCDYS FDGLLN Q    I N INKLY     ++  
Sbjct: 534  TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 587

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
               R N+LMA+ GR++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P 
Sbjct: 588  SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 647

Query: 541  KCRFQQTVCLI 573
               F+Q VCLI
Sbjct: 648  VNNFKQEVCLI 658

[16][TOP]
>UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA7_9SECO
          Length = 985

 Score =  179 bits (454), Expect = 1e-43
 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4    LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ ++ PKDE L P + ++    R F ++P+HYNL LR+        +Q NRHRL C VG
Sbjct: 474  LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 533

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSR+W  I  RL    +  A+NCDYS FDGLLN Q    I N INKLY     ++  
Sbjct: 534  TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 587

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
               R N+LMA+ GR++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P 
Sbjct: 588  SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 647

Query: 541  KCRFQQTVCLI 573
               F+Q VCLI
Sbjct: 648  VNNFKQEVCLI 658

[17][TOP]
>UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA6_9SECO
          Length = 985

 Score =  179 bits (454), Expect = 1e-43
 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4    LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ ++ PKDE L P + ++    R F ++P+HYNL LR+        +Q NRHRL C VG
Sbjct: 474  LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 533

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSR+W  I  RL    +  A+NCDYS FDGLLN Q    I N INKLY     ++  
Sbjct: 534  TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 587

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
               R N+LMA+ GR++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P 
Sbjct: 588  SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 647

Query: 541  KCRFQQTVCLI 573
               F+Q VCLI
Sbjct: 648  VNNFKQEVCLI 658

[18][TOP]
>UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE
            RASPBERRY) RepID=POL1_TORVR
          Length = 2197

 Score =  179 bits (454), Expect = 1e-43
 Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4    LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ ++ PKDE L P + ++    R F ++P+HYNL LR+        +Q NRHRL C VG
Sbjct: 1686 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 1745

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            TNPYSR+W  I  RL    +  A+NCDYS FDGLLN Q    I N INKLY     ++  
Sbjct: 1746 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINKLY-----NDEH 1799

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
               R N+LMA+ GR++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P 
Sbjct: 1800 SIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPL 1859

Query: 541  KCRFQQTVCLI 573
               F+Q VCLI
Sbjct: 1860 VNNFKQEVCLI 1870

[19][TOP]
>UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus
           RepID=UPI0000163D09
          Length = 711

 Score =  178 bits (451), Expect = 3e-43
 Identities = 95/196 (48%), Positives = 122/196 (62%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IECPKDE LP RKI      R F I+P+ YNL +R K   F +F+  NR +L CQVG
Sbjct: 196 LIGIECPKDEKLPLRKIYDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 255

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPYS EW  +   L+  G N  + CDY +FDGLL+ QV+  IA MIN+L    G S+  
Sbjct: 256 INPYSMEWTRLAGSLLSVGQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 311

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525
           Q  R N+LMA   RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+     
Sbjct: 312 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 371

Query: 526 APKPEKCRFQQTVCLI 573
            P+P    F + V L+
Sbjct: 372 VPRPLHVNFPRMVKLV 387

[20][TOP]
>UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO
          Length = 1858

 Score =  178 bits (451), Expect = 3e-43
 Identities = 95/196 (48%), Positives = 122/196 (62%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RKI      R F I+P+ YNL +R K   F +F+  NR +L CQVG
Sbjct: 1343 LIGIECPKDEKLPLRKIYDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 1402

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  +   L+  G N  + CDY +FDGLL+ QV+  IA MIN+L    G S+  
Sbjct: 1403 INPYSMEWTRLAGSLLSVGQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 1458

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525
            Q  R N+LMA   RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+     
Sbjct: 1459 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 1518

Query: 526  APKPEKCRFQQTVCLI 573
             P+P    F + V L+
Sbjct: 1519 VPRPLHVNFPRMVKLV 1534

[21][TOP]
>UniRef100_Q6A1M4 Polyprotein (Fragment) n=1 Tax=Squash mosaic virus
           RepID=Q6A1M4_9SECO
          Length = 243

 Score =  177 bits (450), Expect = 4e-43
 Identities = 94/196 (47%), Positives = 122/196 (62%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IECPKDE LP RK+      R F I+P+ YNL +R K   F +F+  NR +L CQVG
Sbjct: 51  LIGIECPKDEKLPLRKVYDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 110

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPYS EW  +   L+  G N  + CDY +FDGLL+ QV+  IA MIN+L    G S+  
Sbjct: 111 INPYSMEWTRLAGSLLSVGQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 166

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525
           Q  R N+LMA   RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+     
Sbjct: 167 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 226

Query: 526 APKPEKCRFQQTVCLI 573
            P+P    F + V L+
Sbjct: 227 VPRPLHVNFPRMVKLV 242

[22][TOP]
>UniRef100_Q1XEN9 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEN9_9SECO
          Length = 239

 Score =  176 bits (447), Expect = 9e-43
 Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           E++ +E PKDE LP RK+      RLF ++PL YN  LR+K   F  FLQ NR RLPCQV
Sbjct: 51  EIICVETPKDERLPARKVTGKPKTRLFSVLPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 110

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G N YSREW  +  RL     N A+NCDYS+FDGL+  Q++ CI +MIN +Y   G+S+ 
Sbjct: 111 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 166

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
            +  R N+LMA+  R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P  
Sbjct: 167 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 226

Query: 538 EKCRFQQTVCLI 573
            +  F + V L+
Sbjct: 227 PRNHFSEYVTLL 238

[23][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score =  176 bits (447), Expect = 9e-43
 Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            E++ +E PKDE LP RK+      RLF ++PL YN  LR+K   F  FLQ NR RLPCQV
Sbjct: 1392 EIICVETPKDERLPARKVTGKPKTRLFSVLPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 1451

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G N YSREW  +  RL     N A+NCDYS+FDGL+  Q++ CI +MIN +Y   G+S+ 
Sbjct: 1452 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 1507

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
             +  R N+LMA+  R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P  
Sbjct: 1508 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 1567

Query: 538  EKCRFQQTVCLI 573
             +  F + V L+
Sbjct: 1568 PRNHFNEYVTLL 1579

[24][TOP]
>UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO
          Length = 1858

 Score =  175 bits (444), Expect = 2e-42
 Identities = 93/196 (47%), Positives = 121/196 (61%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RK+      R F I+P+ YNL +R K   F +F+  NR +L CQVG
Sbjct: 1343 LIGIECPKDEKLPLRKVFDTPKTRCFTILPMEYNLLVRMKFLKFVRFIMRNREKLACQVG 1402

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  +   L+    N  + CDY +FDGLL+ QV+  IA MIN+L    G S+  
Sbjct: 1403 INPYSMEWTRLAGSLLSVSQN-ILCCDYKSFDGLLSKQVMTVIATMINRL---CGGSQES 1458

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL----- 525
            Q  R N+LMA   RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+     
Sbjct: 1459 QTMRMNLLMACCSRYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNN 1518

Query: 526  APKPEKCRFQQTVCLI 573
             P+P    F + V L+
Sbjct: 1519 VPRPLHVNFPRMVKLV 1534

[25][TOP]
>UniRef100_Q1XEN8 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEN8_9SECO
          Length = 239

 Score =  175 bits (443), Expect = 3e-42
 Identities = 90/192 (46%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           E++ +E PKDE LP RK+      RLF  +PL YN  LR+K   F  FLQ NR RLPCQV
Sbjct: 51  EIICVETPKDERLPARKVTGKPKTRLFSALPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 110

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G N YSREW  +  RL     N A+NCDYS+FDGL+  Q++ CI +MIN +Y   G+S+ 
Sbjct: 111 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 166

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
            +  R N+LMA+  R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P  
Sbjct: 167 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 226

Query: 538 EKCRFQQTVCLI 573
            +  F + V L+
Sbjct: 227 PRNHFSEYVTLL 238

[26][TOP]
>UniRef100_Q1XEP0 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEP0_9SECO
          Length = 239

 Score =  174 bits (442), Expect = 3e-42
 Identities = 90/192 (46%), Positives = 122/192 (63%), Gaps = 1/192 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           E++ +E PKDE LP RK+      RLF  +PL YN  LR+K   F  FLQ NR RLPCQV
Sbjct: 51  EIICVETPKDERLPVRKVTGKPKTRLFSALPLSYNFMLRKKFLYFVAFLQKNRGRLPCQV 110

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G N YSREW  +  RL     N A+NCDYS+FDGL+  Q++ CI +MIN +Y   G+S+ 
Sbjct: 111 GINAYSREWQTLYNRLAERSEN-ALNCDYSSFDGLMTGQMLSCIGDMINTMY---GDSQK 166

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
            +  R N+LMA+  R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P  
Sbjct: 167 SKNGRKNLLMAICNRKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGV 226

Query: 538 EKCRFQQTVCLI 573
            +  F + V L+
Sbjct: 227 PRNHFSEYVTLL 238

[27][TOP]
>UniRef100_A5A4Z3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cowpea mosaic virus
           RepID=A5A4Z3_CPMV
          Length = 203

 Score =  174 bits (442), Expect = 3e-42
 Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
 Frame = +1

Query: 13  IECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189
           ++ PKDE LP RK+      R F I+P+ YNL +R+K   F +F+  NRHRL CQVG NP
Sbjct: 7   VDFPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMANRHRLSCQVGINP 66

Query: 190 YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ 369
           YS EW  + AR+   G N+ + CDYS+FDGLL+ QV++ IA+MIN+L    GE +++ A+
Sbjct: 67  YSMEWSRLAARMKEKG-NDVLCCDYSSFDGLLSKQVMDVIASMINEL--CGGEDQLKNAR 123

Query: 370 RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           R N+LMA   R A     V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL
Sbjct: 124 R-NLLMACCSRLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKL 174

[28][TOP]
>UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus
           RepID=Q2TCK2_9SECO
          Length = 709

 Score =  172 bits (437), Expect = 1e-41
 Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+  NR+ LPCQVG
Sbjct: 198 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 257

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPY  EW  +  RL R G N  + CDYS+FDGLL+ QV++ +++MIN   +  G SE  
Sbjct: 258 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMIN---SFCGGSESS 313

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           + +R ++LMA   RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +
Sbjct: 314 KRKREHLLMACCSRYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 368

[29][TOP]
>UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO
          Length = 1853

 Score =  172 bits (437), Expect = 1e-41
 Identities = 87/175 (49%), Positives = 119/175 (68%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+  NR+ LPCQVG
Sbjct: 1342 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 1401

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPY  EW  +  RL R G N  + CDYS+FDGLL+ QV++ +++MIN   +  G SE  
Sbjct: 1402 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMIN---SFCGGSESS 1457

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +R ++LMA   RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +
Sbjct: 1458 KRKREHLLMACCSRYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1512

[30][TOP]
>UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot
           virus RepID=Q155U1_9SECO
          Length = 711

 Score =  172 bits (436), Expect = 2e-41
 Identities = 90/191 (47%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
 Frame = +1

Query: 4   LVVIECPKDELL-PERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ ++ PKDE L P + ++    R F ++P+HYNL LR+        +Q NRHRL C VG
Sbjct: 200 LIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVG 259

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
           TNPYSR+W  I  RL    +  A+NCDYS FDGLLN Q    I N IN+LY     ++  
Sbjct: 260 TNPYSRDWTDIYQRLAEKNS-VALNCDYSRFDGLLNYQAYVHIVNFINRLY-----NDEH 313

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
              R N+LMA+ GR++  GQ+V++V  G+PSG ALTV++NS+FNE+LI Y YR   P+  
Sbjct: 314 STVRGNLLMAMYGRWSVCGQRVYEVRAGMPSGCALTVIINSLFNELLIGYVYRVTVPRSL 373

Query: 541 KCRFQQTVCLI 573
              F+Q VCLI
Sbjct: 374 VNNFKQEVCLI 384

[31][TOP]
>UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus
           RepID=UPI0000163CFC
          Length = 712

 Score =  172 bits (435), Expect = 2e-41
 Identities = 89/175 (50%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IECPKDE LP RKI +    R F ++P+ YNL +R+K   F  F+  NRHRL CQVG
Sbjct: 194 LVGIECPKDEKLPLRKIYEKPKTRCFTVLPMEYNLVVRRKFLKFVVFIMKNRHRLSCQVG 253

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPY  EW  +   L+  G N  + CDYS+FDGLL  QV+  ++ MIN+L    G S ++
Sbjct: 254 INPYGMEWSRLAMSLLEKGNN-ILCCDYSSFDGLLTKQVMHLMSEMINEL--CGGSSRLK 310

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           Q QR N+LMA   RYA    +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+
Sbjct: 311 Q-QRTNLLMACCSRYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKI 364

[32][TOP]
>UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO
          Length = 1853

 Score =  172 bits (435), Expect = 2e-41
 Identities = 87/175 (49%), Positives = 118/175 (67%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+  NR+ LPCQVG
Sbjct: 1342 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 1401

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPY  EW  +  RL R G N  + CDYS+FDGLL+ QV++ +++MIN      G SE  
Sbjct: 1402 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMINNF---CGGSESS 1457

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +R ++LMA   RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +
Sbjct: 1458 KRKREHLLMACCSRYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1512

[33][TOP]
>UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus
            (strain DG) RepID=POL1_CPSMV
          Length = 1858

 Score =  172 bits (435), Expect = 2e-41
 Identities = 89/175 (50%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RKI +    R F ++P+ YNL +R+K   F  F+  NRHRL CQVG
Sbjct: 1340 LVGIECPKDEKLPLRKIYEKPKTRCFTVLPMEYNLVVRRKFLKFVVFIMKNRHRLSCQVG 1399

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPY  EW  +   L+  G N  + CDYS+FDGLL  QV+  ++ MIN+L    G S ++
Sbjct: 1400 INPYGMEWSRLAMSLLEKGNN-ILCCDYSSFDGLLTKQVMHLMSEMINEL--CGGSSRLK 1456

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            Q QR N+LMA   RYA    +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+
Sbjct: 1457 Q-QRTNLLMACCSRYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKI 1510

[34][TOP]
>UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO
          Length = 1853

 Score =  171 bits (432), Expect = 5e-41
 Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+  NR+ LPCQVG
Sbjct: 1342 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLTFVRFIMRNRNVLPCQVG 1401

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPY  EW  +  RL R G N  + CDYS+FDGLL+ QV++ +++MIN      G +E  
Sbjct: 1402 INPYGMEWTDLAMRLKRKGNN-ILCCDYSSFDGLLSKQVMKAMSDMINNF---CGGNESS 1457

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +R ++LMA   RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +
Sbjct: 1458 KRKREHLLMACCSRYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1512

[35][TOP]
>UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus
           RepID=UPI00003FE537
          Length = 825

 Score =  170 bits (430), Expect = 8e-41
 Identities = 88/190 (46%), Positives = 118/190 (62%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           LV IE PKDE L   KI+    RLF ++PL YNL LR K  +F++ L   R  LPCQVG 
Sbjct: 190 LVSIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 249

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
           NPYSREW  +  RL    ++   NCDY  FDGL+  Q++  +A MIN  +     + V  
Sbjct: 250 NPYSREWTDLYHRLAEK-SDVGYNCDYKGFDGLITEQILAVVATMINAGF----RNPVSN 304

Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
            QR N+LMA+ GR +  G +V++   G+PSG ALTVV+NS+FNE+L+RY Y+K+ P   +
Sbjct: 305 QQRSNLLMAISGRLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYR 364

Query: 544 CRFQQTVCLI 573
             F + V LI
Sbjct: 365 ECFDRCVVLI 374

[36][TOP]
>UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW
            RepID=POL1_ARMVN
          Length = 2284

 Score =  170 bits (430), Expect = 8e-41
 Identities = 88/190 (46%), Positives = 118/190 (62%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            LV IE PKDE L   KI+    RLF ++PL YNL LR K  +F++ L   R  LPCQVG 
Sbjct: 1649 LVSIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 1708

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
            NPYSREW  +  RL    ++   NCDY  FDGL+  Q++  +A MIN  +     + V  
Sbjct: 1709 NPYSREWTDLYHRLAEK-SDVGYNCDYKGFDGLITEQILAVVATMINAGF----RNPVSN 1763

Query: 364  AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
             QR N+LMA+ GR +  G +V++   G+PSG ALTVV+NS+FNE+L+RY Y+K+ P   +
Sbjct: 1764 QQRSNLLMAISGRLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYR 1823

Query: 544  CRFQQTVCLI 573
              F + V LI
Sbjct: 1824 ECFDRCVVLI 1833

[37][TOP]
>UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV
          Length = 2285

 Score =  169 bits (427), Expect = 2e-40
 Identities = 86/190 (45%), Positives = 118/190 (62%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            L+ IE PKDE L   KI+    RLF ++PL YNL LR K  +F++ L   R  LPCQVG 
Sbjct: 1651 LISIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 1710

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
            NPYSREW  +  RL    ++   NCDY  FDGL+  Q++  +A MIN  Y     + V  
Sbjct: 1711 NPYSREWTDLYHRLAEQ-SDIGYNCDYKGFDGLITEQILAVVATMINTGY----RNPVSN 1765

Query: 364  AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
             QR N+L+A+ GR +  G +V++   G+PSG ALTVV+NS+FNE+L+RY ++K+ P   +
Sbjct: 1766 QQRSNLLLAICGRLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYR 1825

Query: 544  CRFQQTVCLI 573
              F + V LI
Sbjct: 1826 ECFDRCVVLI 1835

[38][TOP]
>UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO
          Length = 1860

 Score =  167 bits (423), Expect = 5e-40
 Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+   R  LPCQVG
Sbjct: 1344 LIGIECPKDEKLPHRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMRRRDILPCQVG 1403

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPY  EW  + ARL   G N  + CDYS+FDGLL+ QV+  +A+MIN      G+S ++
Sbjct: 1404 INPYGMEWTDLAARLKSKGNN-ILCCDYSSFDGLLSKQVMAAMASMINSF--CGGDSSIK 1460

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +R N+LMA   RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +
Sbjct: 1461 K-KRENLLMACCSRYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAI 1514

[39][TOP]
>UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO
          Length = 1857

 Score =  166 bits (421), Expect = 9e-40
 Identities = 86/178 (48%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+   R  LPCQVG
Sbjct: 1341 LIGIECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMKRRDILPCQVG 1400

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPY  EW  + ARL   G N  + CDYS+FDGLL+ QV+  +A+MIN      G++ ++
Sbjct: 1401 INPYGMEWTDLAARLKSKGNN-VLCCDYSSFDGLLSKQVMTAMASMINSF--CGGDTSIK 1457

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            + +R N+LMA   RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K
Sbjct: 1458 R-KRENLLMACCSRYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRK 1514

[40][TOP]
>UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO
          Length = 1860

 Score =  166 bits (421), Expect = 9e-40
 Identities = 86/178 (48%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+   R  LPCQVG
Sbjct: 1344 LIGIECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMKRRDILPCQVG 1403

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPY  EW  + ARL   G N  + CDYS+FDGLL+ QV+  +A+MIN      G++ ++
Sbjct: 1404 INPYGMEWTDLAARLKSKGNN-VLCCDYSSFDGLLSKQVMAAMASMINSF--CGGDTSIK 1460

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            + +R N+LMA   RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K
Sbjct: 1461 R-KRENLLMACCSRYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRK 1517

[41][TOP]
>UniRef100_Q6A2S6 Polyprotein (Fragment) n=1 Tax=Cherry leaf roll virus
           RepID=Q6A2S6_9SECO
          Length = 240

 Score =  166 bits (420), Expect = 1e-39
 Identities = 89/190 (46%), Positives = 120/190 (63%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           LV +E PKDE L E KI   A R F ++P+ YNL LR+    FT FLQ NRHRLPC VG 
Sbjct: 55  LVGMEIPKDERLKESKILTPATRTFTVLPMPYNLLLRKFFGRFTAFLQGNRHRLPCAVGV 114

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
           NPYS EW  I   L +  + +A+N DY +FDG LN Q+ + IA ++ +++      E   
Sbjct: 115 NPYSNEWTRIFDGLAQM-SPKALNGDYKSFDGKLNFQMYDAIARLLGRVH----RDESTS 169

Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
             RYN++MA+  RY+  G +V++V  GLPSG A+TV+++S+FNEILIRYAYR       +
Sbjct: 170 QARYNLIMAMYARYSLCGSQVYEVRAGLPSGCAITVIMDSIFNEILIRYAYRVSVGPILR 229

Query: 544 CRFQQTVCLI 573
            RF   V L+
Sbjct: 230 NRFNHFVKLV 239

[42][TOP]
>UniRef100_Q6A2S5 Polyprotein (Fragment) n=1 Tax=Potato black ringspot virus
           RepID=Q6A2S5_9SECO
          Length = 252

 Score =  166 bits (420), Expect = 1e-39
 Identities = 97/201 (48%), Positives = 125/201 (62%), Gaps = 11/201 (5%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174
           E+V IECPKDELL  RK+  K+G  R FEI+ L  N+  R+K  ++  FL   R  LPCQ
Sbjct: 52  EMVCIECPKDELLVPRKVLEKLGT-RNFEILELPKNMLFRKKFLSWASFLSEMRWCLPCQ 110

Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALS---- 342
           VG     REWG +L RL    +  A NCDYS FDGL++ QV++ I  M+NK YA +    
Sbjct: 111 VGIVVQGREWGLLLDRLSEKNS-VAYNCDYSKFDGLMSCQVLDAIGKMVNKCYANTNPNK 169

Query: 343 -GESEVQ----QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIR 507
            G  EV     Q  R+N+LM++ GR      +VF+V  G+PSG ALTV++NSVFNEILIR
Sbjct: 170 KGRGEVPGSPPQLARHNLLMSIFGRKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIR 229

Query: 508 YAYRKLAPKPEKCRFQQTVCL 570
           Y Y+ + P PE  RF+  V L
Sbjct: 230 YVYKTVVPSPEFNRFETFVTL 250

[43][TOP]
>UniRef100_Q6A1Z2 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus
           RepID=Q6A1Z2_ARMV
          Length = 236

 Score =  166 bits (420), Expect = 1e-39
 Identities = 85/190 (44%), Positives = 117/190 (61%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           L+ IE PKDE L   KI+    RLF ++PL YNL LR K  +F++ L   R  LPCQVG 
Sbjct: 51  LISIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVGI 110

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
           NPYSREW  +  RL    ++   NCDY  FDGL+  Q++   A MIN  Y     + V  
Sbjct: 111 NPYSREWTDLYHRLAEQ-SDIGYNCDYKGFDGLITEQILAVAATMINTGY----RNPVGN 165

Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
            QR N+L+A+ GR +  G +V++   G+PSG ALTVV+NS+FNE+L+RY ++K+ P   +
Sbjct: 166 QQRSNLLLAICGRLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYR 225

Query: 544 CRFQQTVCLI 573
             F + V L+
Sbjct: 226 ECFDRCVVLV 235

[44][TOP]
>UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus
            RepID=POL1_GFLV
          Length = 2284

 Score =  166 bits (419), Expect = 2e-39
 Identities = 89/190 (46%), Positives = 116/190 (61%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            LV IE PKDE L   KI     RLF ++PL YNL LR K  +F++ L   R  LPCQVG 
Sbjct: 1650 LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVGI 1709

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
            NPYSREW  +  RL    ++   NCDY AFDGL+  Q++  IA+MIN  Y       V  
Sbjct: 1710 NPYSREWTDLYHRLGEL-SDVGYNCDYKAFDGLITEQILSTIADMINAGY----RDPVGN 1764

Query: 364  AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
             QR N+L+A+ GR +  G +V+    G+PSG ALTVV+NS+F E+L+RY ++K+ P   K
Sbjct: 1765 RQRKNLLLAICGRLSICGNQVYATEAGIPSGCALTVVLNSIFKELLMRYCFKKIVPPVYK 1824

Query: 544  CRFQQTVCLI 573
              F + V LI
Sbjct: 1825 ECFDRCVVLI 1834

[45][TOP]
>UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot
           virus RepID=B2KL92_9SECO
          Length = 712

 Score =  165 bits (418), Expect = 2e-39
 Identities = 85/175 (48%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+   R  LPCQVG
Sbjct: 196 LIGIECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMRRRDILPCQVG 255

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPY  EW  + ARL   G N  + CDYS+FDGLL+ QV+  +A+MIN      G++ ++
Sbjct: 256 INPYGMEWTDLAARLKSKGNN-ILCCDYSSFDGLLSKQVMAAMASMINSF--CGGDTSIK 312

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           + +R N+LMA   RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +
Sbjct: 313 K-KRENLLMACCSRYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAI 366

[46][TOP]
>UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle
           virus RepID=POL1_APMV
          Length = 729

 Score =  165 bits (417), Expect = 3e-39
 Identities = 86/175 (49%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IECPKDE LP RKI      R F I+P+ YNL +RQK   F +F+   R  LP QVG
Sbjct: 220 LVAIECPKDEKLPLRKIYTSPKTRCFSILPMEYNLLVRQKFLHFVRFMMKRRDVLPSQVG 279

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPYS EWG I  RL   G N  + CDYS+FDGL+++QV+ CIA+ +N    + G+  ++
Sbjct: 280 VNPYSLEWGAIARRLQEVG-NSILCCDYSSFDGLMSSQVMSCIADTMNDF--MGGDVSLK 336

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           + QR N+LMA   R++ V   V++V  G+PSGF LTVV+N +FNE+L+RY ++K+
Sbjct: 337 R-QRKNLLMACCSRFSVVKGNVWRVEGGIPSGFPLTVVMNGIFNELLVRYCFKKI 390

[47][TOP]
>UniRef100_Q6A1M5 Polyprotein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q6A1M5_TRSV
          Length = 254

 Score =  163 bits (413), Expect = 8e-39
 Identities = 95/204 (46%), Positives = 127/204 (62%), Gaps = 13/204 (6%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174
           E+V IECPKDELL ERK+  K+G  R FEI+ L  N+  R+K   +  FL   R  LPCQ
Sbjct: 52  EMVCIECPKDELLVERKVLQKLGT-RNFEILELPKNMLFRKKFLHWALFLSDMRWCLPCQ 110

Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALS---- 342
           VG     REWG ++ RL    +  A NCDYS FDGL++ QV++ I  M+NK Y+ +    
Sbjct: 111 VGIVVQGREWGLLMDRLAAKNS-VAYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNL 169

Query: 343 ---GESEVQ----QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEIL 501
              G+ E+     Q  R+N+LM++ GR      +VF+V  G+PSG ALTV++NSVFNEIL
Sbjct: 170 KKKGKGELPGSPPQLARHNLLMSIFGRKCLARSQVFEVRGGIPSGCALTVLLNSVFNEIL 229

Query: 502 IRYAYRKLAPKPEKCRFQQTVCLI 573
           IRY Y+ + P PE  RF+  V L+
Sbjct: 230 IRYVYKTVIPSPEFNRFETFVTLV 253

[48][TOP]
>UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus
           RepID=Q06RG7_9SECO
          Length = 396

 Score =  163 bits (413), Expect = 8e-39
 Identities = 84/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
 Frame = +1

Query: 16  ECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
           ECPKDE LP RKI +    R F I+P+ YNL +R++   F +F+   R  LPCQVG NPY
Sbjct: 1   ECPKDEKLPYRKIFEKPKTRCFSILPMEYNLLVRRRFLKFVRFIMKRRDILPCQVGINPY 60

Query: 193 SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
             EW  + ARL   G N  + CDYS+FDGLL+ QV+  +A+MIN      G++ +++ +R
Sbjct: 61  GMEWTDLAARLKSKGNN-VLCCDYSSFDGLLSKQVMTAMASMINSF--CGGDTSIKR-KR 116

Query: 373 YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            N+LMA   RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K
Sbjct: 117 ENLLMACCSRYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRK 170

[49][TOP]
>UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus
           RepID=UPI0000163D04
          Length = 713

 Score =  162 bits (410), Expect = 2e-38
 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IECPKDE LP RK+      R F I+P+ YN+ +RQ    F +F+   R  LPCQVG
Sbjct: 196 LVGIECPKDEKLPFRKVFTKPKTRNFTILPMEYNILVRQYFLNFVRFIMKKRDVLPCQVG 255

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPYS EW  + +RL   G N+ + CDYS+FDGLL+ Q++E +A+MIN+     G   + 
Sbjct: 256 INPYSMEWSIVASRLKSQG-NDILCCDYSSFDGLLSKQIMEMMADMINRF---CGGGTLI 311

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            A+R N+LMA   R A     V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L
Sbjct: 312 CAKRKNLLMACCSRLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLL 366

[50][TOP]
>UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus
            RepID=POL1_RCMV
          Length = 1864

 Score =  162 bits (410), Expect = 2e-38
 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RK+      R F I+P+ YN+ +RQ    F +F+   R  LPCQVG
Sbjct: 1347 LVGIECPKDEKLPFRKVFTKPKTRNFTILPMEYNILVRQYFLNFVRFIMKKRDVLPCQVG 1406

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  + +RL   G N+ + CDYS+FDGLL+ Q++E +A+MIN+     G   + 
Sbjct: 1407 INPYSMEWSIVASRLKSQG-NDILCCDYSSFDGLLSKQIMEMMADMINRF---CGGGTLI 1462

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
             A+R N+LMA   R A     V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L
Sbjct: 1463 CAKRKNLLMACCSRLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLL 1517

[51][TOP]
>UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO
          Length = 1851

 Score =  161 bits (408), Expect = 3e-38
 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RKI      R F I+P+ +NL +RQK   F +F+   R +L CQVG
Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  +  RL+  G N+ + CDY++FDGL+  QV+  +A MIN   +L G  E  
Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
              +R ++L+A   R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL
Sbjct: 1452 MRERTHLLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506

[52][TOP]
>UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO
          Length = 1851

 Score =  161 bits (408), Expect = 3e-38
 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RKI      R F I+P+ +NL +RQK   F +F+   R +L CQVG
Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  +  RL+  G N+ + CDY++FDGL+  QV+  +A MIN   +L G  E  
Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
              +R ++L+A   R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL
Sbjct: 1452 MRERTHLLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506

[53][TOP]
>UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO
          Length = 1851

 Score =  161 bits (408), Expect = 3e-38
 Identities = 85/175 (48%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RKI      R F I+P+ +NL +RQK   F +F+   R +L CQVG
Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  +  RL+  G N+ + CDY++FDGL+  QV+  +A MIN   +L G  E  
Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
              +R ++L+A   R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL
Sbjct: 1452 MRERTHLLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506

[54][TOP]
>UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1
           RepID=UPI0000231CC7
          Length = 699

 Score =  159 bits (402), Expect = 1e-37
 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERK-IKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           +L  IEC KDE LP RK IK    RLF ++P+ YNL +R+K   F +F+   R  LPCQV
Sbjct: 194 DLYCIECVKDERLPVRKVIKEPKSRLFTVLPMSYNLAIRKKFLNFVRFIMKRRDVLPCQV 253

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G NPYSR+WG +  RL+  G N  + CDYS FDG L   ++  IA M + +    GE+  
Sbjct: 254 GINPYSRQWGKVADRLLEKG-NSILCCDYSRFDGFLPKCIMVKIAEMFSNIV---GETGA 309

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
           ++ Q  N+++A   RYA  G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K
Sbjct: 310 EREQTKNLMLACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWK 364

[55][TOP]
>UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1
          Length = 1842

 Score =  159 bits (402), Expect = 1e-37
 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERK-IKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK IK    RLF ++P+ YNL +R+K   F +F+   R  LPCQV
Sbjct: 1337 DLYCIECVKDERLPVRKVIKEPKSRLFTVLPMSYNLAIRKKFLNFVRFIMKRRDVLPCQV 1396

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSR+WG +  RL+  G N  + CDYS FDG L   ++  IA M + +    GE+  
Sbjct: 1397 GINPYSRQWGKVADRLLEKG-NSILCCDYSRFDGFLPKCIMVKIAEMFSNIV---GETGA 1452

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
            ++ Q  N+++A   RYA  G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K
Sbjct: 1453 EREQTKNLMLACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWK 1507

[56][TOP]
>UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus
           RepID=UPI0000163CF4
          Length = 710

 Score =  159 bits (401), Expect = 2e-37
 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IECPKDE LP RKI      R F I+P+ +NL +RQK   F +F+   R +L CQVG
Sbjct: 195 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 254

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NPYS EW  +  RL+  G N+ + CDY++F GL+  QV+  +A MIN   +L G  E  
Sbjct: 255 INPYSMEWTGLANRLLSKG-NDILCCDYASFSGLITKQVMSKMAEMIN---SLCGGDEKL 310

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
             +R ++L+A   R A   + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL
Sbjct: 311 MRERTHLLLACCSRMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 365

[57][TOP]
>UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO
          Length = 1851

 Score =  159 bits (401), Expect = 2e-37
 Identities = 84/175 (48%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RKI      R F I+ + +NL +RQK   F +F+   R +L CQVG
Sbjct: 1336 LVGIECPKDEKLPRRKIFDKPKTRCFTILSMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1395

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  +  RL+  G N+ + CDY++FDGL+  QV+  +A MIN   +L G  E  
Sbjct: 1396 INPYSMEWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKL 1451

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
              +R ++L+A   R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL
Sbjct: 1452 MRERTHLLLACCSRMAICKKNVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1506

[58][TOP]
>UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain
            Kentucky G7) RepID=POL1_BPMV
          Length = 1850

 Score =  159 bits (401), Expect = 2e-37
 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            LV IECPKDE LP RKI      R F I+P+ +NL +RQK   F +F+   R +L CQVG
Sbjct: 1335 LVGIECPKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVG 1394

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NPYS EW  +  RL+  G N+ + CDY++F GL+  QV+  +A MIN   +L G  E  
Sbjct: 1395 INPYSMEWTGLANRLLSKG-NDILCCDYASFSGLITKQVMSKMAEMIN---SLCGGDEKL 1450

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
              +R ++L+A   R A   + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL
Sbjct: 1451 MRERTHLLLACCSRMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 1505

[59][TOP]
>UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1
          Length = 1842

 Score =  158 bits (399), Expect = 3e-37
 Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+ K    RLF ++P+ YNL +R+K   F +F+   R  LPCQV
Sbjct: 1337 DLYCIECVKDERLPIRKVLKEPKSRLFTVLPMSYNLAVRKKFLNFVRFIMKRRDVLPCQV 1396

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSR+WG +  RL+  G N  + CDYS FDG L   ++  IA M + +   +GES  
Sbjct: 1397 GINPYSRQWGKVADRLLEKG-NSILCCDYSRFDGFLPKCIMVKIAEMFSNVVGETGES-- 1453

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
             + Q  N+++A   RYA  G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K
Sbjct: 1454 -REQTKNLMLACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWK 1507

[60][TOP]
>UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus
           RepID=UPI000180D482
          Length = 474

 Score =  156 bits (395), Expect = 9e-37
 Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           +L  IEC KDE LP+RK+ +    RLF ++P+ YNL +R+K   F +F  T R  LPCQV
Sbjct: 158 DLYCIECVKDERLPKRKVLEKPKSRLFTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQV 217

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G NPYSREW  I  +L+  G N  + CDYS FDG L   ++  I  +I    +  G+++ 
Sbjct: 218 GVNPYSREWSRIACKLLEKG-NNILCCDYSRFDGFLPKCIMLKIGQLIG---SFMGKNDE 273

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519
           +  Q  N+L+A  GRYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAYR
Sbjct: 274 EVTQICNLLLACTGRYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYR 327

[61][TOP]
>UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO
          Length = 1853

 Score =  156 bits (395), Expect = 9e-37
 Identities = 80/174 (45%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP+RK+ +    RLF ++P+ YNL +R+K   F +F  T R  LPCQV
Sbjct: 1343 DLYCIECVKDERLPKRKVLEKPKSRLFTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQV 1402

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  I  +L+  G N  + CDYS FDG L   ++  I  +I    +  G+++ 
Sbjct: 1403 GVNPYSREWSRIACKLLEKG-NNILCCDYSRFDGFLPKCIMLKIGQLIG---SFMGKNDE 1458

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519
            +  Q  N+L+A  GRYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAYR
Sbjct: 1459 EVTQICNLLLACTGRYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYR 1512

[62][TOP]
>UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud
            Blight RepID=POL1_TRSVB
          Length = 2304

 Score =  156 bits (394), Expect = 1e-36
 Identities = 94/204 (46%), Positives = 125/204 (61%), Gaps = 13/204 (6%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174
            E+V IECPKDELL ERK+  K+G  R FEI+ L  N+  R+K   +  FL   R  LPCQ
Sbjct: 1682 EMVCIECPKDELLVERKVLQKLGT-RNFEILELPKNMLFRKKFLHWALFLSDMRWCLPCQ 1740

Query: 175  VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALS---- 342
            VG     REWG ++ RL    +  A NCDYS FDGL++ QV++ I  M+NK Y+ +    
Sbjct: 1741 VGIVVQGREWGLLMDRLAAKNS-VAYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNL 1799

Query: 343  ---GESEVQ----QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEIL 501
               G+ E+     Q  RYN+LM++ GR      +VF+V  G+  G ALTV++NSVFNEIL
Sbjct: 1800 KKKGKGELPGSPPQLARYNLLMSIFGRKCLARSQVFEVRGGIRRG-ALTVLLNSVFNEIL 1858

Query: 502  IRYAYRKLAPKPEKCRFQQTVCLI 573
            IRY Y+ + P PE  RF+  V L+
Sbjct: 1859 IRYVYKTVIPSPEFNRFETFVTLV 1882

[63][TOP]
>UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO
          Length = 1853

 Score =  155 bits (393), Expect = 2e-36
 Identities = 81/174 (46%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP+RK+ +    RLF ++P+ YNL +R+K   F +F  T R  LPCQV
Sbjct: 1343 DLYCIECVKDERLPKRKVLETPKSRLFTVLPMSYNLVIRKKFLNFVRFFMTRRDVLPCQV 1402

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  I  +L+  G N  + CDYS FDG L   ++  I ++I   +    E+EV
Sbjct: 1403 GVNPYSREWSRIACKLLEKG-NNILCCDYSRFDGFLPKCIMSQIGHLIG-TFMKKDEAEV 1460

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519
            +Q    N+L+A  GRYA   + +++V  G+PSGF LTV+VNS+ NEIL++YA+R
Sbjct: 1461 EQI--CNLLLACSGRYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAFR 1512

[64][TOP]
>UniRef100_A5A4Z4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Bean pod mottle
           virus RepID=A5A4Z4_9SECO
          Length = 197

 Score =  152 bits (385), Expect = 1e-35
 Identities = 80/169 (47%), Positives = 109/169 (64%), Gaps = 1/169 (0%)
 Frame = +1

Query: 22  PKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198
           PKDE LP RKI      R F I+P+ +NL +RQK   F +F+   R +L CQVG NPYS 
Sbjct: 4   PKDEKLPRRKIFDKPKTRCFTILPMEFNLVVRQKFLNFVRFIMKKRDKLSCQVGINPYSM 63

Query: 199 EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378
           EW  +  RL+  G N+ + CDY++FDGL+  QV+  +A MIN   +L G  E    +R +
Sbjct: 64  EWTGLANRLLSKG-NDILCCDYASFDGLITKQVMSKMAEMIN---SLCGGDEKLMRERTH 119

Query: 379 MLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           +L+A   R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL
Sbjct: 120 LLLACCSRMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKL 168

[65][TOP]
>UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO
          Length = 1870

 Score =  147 bits (372), Expect = 4e-34
 Identities = 78/173 (45%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1424

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  +  +L+  G N  + CDYS FDG L   ++  I NMI +L  +    EV
Sbjct: 1425 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMKVD---EV 1480

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
             +AQ  N+++A   RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY
Sbjct: 1481 SRAQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1533

[66][TOP]
>UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus
           RepID=UPI0000163DD4
          Length = 699

 Score =  146 bits (368), Expect = 1e-33
 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 194 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 253

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G NPYSREW  +  +L+  G N  + CDYS FDG L   ++  I NMI +L  +    EV
Sbjct: 254 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMRVD---EV 309

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            + Q  N+++A   RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY
Sbjct: 310 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 362

[67][TOP]
>UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO
          Length = 1870

 Score =  146 bits (368), Expect = 1e-33
 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1424

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  +  +L+  G N  + CDYS FDG L   ++  I NMI +L  +    EV
Sbjct: 1425 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMRVD---EV 1480

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
             + Q  N+++A   RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY
Sbjct: 1481 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1533

[68][TOP]
>UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt
           virus 2 RepID=B8Y619_9SECO
          Length = 594

 Score =  146 bits (368), Expect = 1e-33
 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 89  DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 148

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G NPYSREW  +  +L+  G N  + CDYS FDG L   ++  I NMI +L  +    EV
Sbjct: 149 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLLKVD---EV 204

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            + Q  N+++A   RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY
Sbjct: 205 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 257

[69][TOP]
>UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO
          Length = 1870

 Score =  145 bits (366), Expect = 2e-33
 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1424

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  +  +L+  G N  + CDYS FDG L   ++  I NMI +L  +    EV
Sbjct: 1425 GVNPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMKVD---EV 1480

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
             +AQ  N+++A   RYA   + +++V  G+PSGF LTV+ NS+ NEIL++YAY
Sbjct: 1481 SKAQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIGNSILNEILVKYAY 1533

[70][TOP]
>UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2
           RepID=UPI0000163DDB
          Length = 697

 Score =  145 bits (365), Expect = 3e-33
 Identities = 79/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 192 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIAIRKKFLNFVRFFMKRRDVLPAQV 251

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G NPYSREW  I  +L+  G N  + CDYS FDG L   V+  I  MI ++   S ES  
Sbjct: 252 GVNPYSREWTRIANKLLSKG-NNVLCCDYSRFDGFLPKCVMNEIGEMIARVMRASDES-- 308

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            + Q  N+++A   RYA   + +++V  G+PSGF LTVVVNS+ NEIL++YAY
Sbjct: 309 -RTQIKNLMLACTSRYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAY 360

[71][TOP]
>UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO
          Length = 1869

 Score =  145 bits (365), Expect = 3e-33
 Identities = 79/173 (45%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 1364 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIAIRKKFLNFVRFFMKRRDVLPAQV 1423

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  I  +L+  G N  + CDYS FDG L   V+  I  MI ++   S ES  
Sbjct: 1424 GVNPYSREWTRIANKLLSKG-NNVLCCDYSRFDGFLPKCVMNEIGEMIARVMRASDES-- 1480

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
             + Q  N+++A   RYA   + +++V  G+PSGF LTVVVNS+ NEIL++YAY
Sbjct: 1481 -RTQIKNLMLACTSRYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAY 1532

[72][TOP]
>UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO
          Length = 1769

 Score =  144 bits (364), Expect = 4e-33
 Identities = 77/173 (44%), Positives = 106/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 1264 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLPAQV 1323

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  +  +L+  G N  + CDYS FDG L   ++  I +MI KL       EV
Sbjct: 1324 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGDMIAKLMKAD---EV 1379

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
             + Q  N+++A   RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY
Sbjct: 1380 SKTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1432

[73][TOP]
>UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO
          Length = 1869

 Score =  144 bits (362), Expect = 6e-33
 Identities = 77/173 (44%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  LP QV
Sbjct: 1364 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIAIRKKFLNFVRFFMKRRDVLPAQV 1423

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  I  +L+  G N  + CDYS FDG L   V+  I +MI ++   + ES+ 
Sbjct: 1424 GVNPYSREWTRIANKLLSKG-NNILCCDYSRFDGFLPKCVMNEIGDMIARVMRANDESKT 1482

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            Q     N+++A   RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY
Sbjct: 1483 QIK---NLMLACTSRYAMCNRILYRVENGIPSGFPLTVIVNSILNEILVKYAY 1532

[74][TOP]
>UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO
          Length = 1870

 Score =  142 bits (358), Expect = 2e-32
 Identities = 76/173 (43%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L  IEC KDE LP RK+      RLF ++P+ YN+ +R+K   F +F    R  L  QV
Sbjct: 1365 DLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNIVIRKKFLNFVRFFMKRRDVLTAQV 1424

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NPYSREW  +  +L+  G N  + CDYS FDG L   ++  I NMI +L       EV
Sbjct: 1425 GINPYSREWTRMANKLLSKGNN-ILCCDYSRFDGFLPKCIMNEIGNMIARLMKTD---EV 1480

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
             + Q  N+++A   RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY
Sbjct: 1481 SRTQIKNLMLACTSRYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAY 1533

[75][TOP]
>UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus
            RepID=O37086_9SECO
          Length = 2150

 Score =  141 bits (356), Expect = 3e-32
 Identities = 79/180 (43%), Positives = 108/180 (60%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            +EC KDE L +RK  V   RLF++MP  +N+ LR+    F+ F+Q NR  L   VGTNPY
Sbjct: 1633 VECLKDECLKKRK--VATPRLFDVMPFEHNILLREYFLNFSAFIQANRIYLSACVGTNPY 1690

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            SREW  +  RL    ++  +NCDYS FDGL++ Q+       +            Q  + 
Sbjct: 1691 SREWTTLYDRLAEY-SDTGLNCDYSKFDGLISHQISR---GWLQPSTVFLETVRKQILRV 1746

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRF 552
             N+L+  +GR +  G++V+ V  G+PSG ALTVV+NS+FNEILIRY YRK+ P P  C F
Sbjct: 1747 GNLLLMFIGRRSICGRQVYMVRGGMPSGCALTVVINSIFNEILIRYVYRKVTPAP-ACNF 1805

[76][TOP]
>UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus
           RepID=Q20LA1_9SECO
          Length = 533

 Score =  141 bits (355), Expect = 4e-32
 Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 4/195 (2%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIK----VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLP 168
           +L+V EC KDELL E K+     +   RLF I P  YN+ +RQ      + ++  R  L 
Sbjct: 327 QLIVKECAKDELLKEGKVLPSEGMPGTRLFSICPAWYNMVVRQHFVYLAESVRKRRRTLS 386

Query: 169 CQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGE 348
            QVG    SREW  + ARL     ++   CDYS FDGL+  Q++  I  +  +++  SG+
Sbjct: 387 SQVGIVVGSREWDDLAARLRSKKNDKMYCCDYSKFDGLMTPQIVHAITGIYERMF--SGK 444

Query: 349 SEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
             + Q  R N++M +  R +  G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L 
Sbjct: 445 DGMSQF-RQNLMMGICNRISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLV 503

Query: 529 PKPEKCRFQQTVCLI 573
           P+ E+  F   V LI
Sbjct: 504 PEIERPFFSNNVALI 518

[77][TOP]
>UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain
            cherry RepID=POL1_RRVC
          Length = 2367

 Score =  139 bits (350), Expect = 2e-31
 Identities = 79/195 (40%), Positives = 111/195 (56%), Gaps = 4/195 (2%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIK----VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLP 168
            +L++ E  KDELL E K+     +   RLF I P  YN+ +RQ      + ++  R  L 
Sbjct: 1748 QLIIKESAKDELLKEGKVLPSEGMPGTRLFSICPAWYNIVVRQHFVYIAESVRKRRRTLS 1807

Query: 169  CQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGE 348
             QVG    SREW  + ARL     ++   CDYS FDGL+  Q++  I N+  +++  SG 
Sbjct: 1808 SQVGIVVGSREWDDLAARLRSKKNDKMYCCDYSKFDGLMTPQIVHAITNIYERMF--SGN 1865

Query: 349  SEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
              + Q  R N+LM +  R +  G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L 
Sbjct: 1866 DGMSQF-RQNLLMGICNRISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLV 1924

Query: 529  PKPEKCRFQQTVCLI 573
            P+ E+  F   V LI
Sbjct: 1925 PEIERPFFSNNVVLI 1939

[78][TOP]
>UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO
          Length = 2366

 Score =  136 bits (343), Expect = 1e-30
 Identities = 79/195 (40%), Positives = 110/195 (56%), Gaps = 4/195 (2%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIK----VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLP 168
            +L+V E  KDELL E K+     +   RLF I P  YN+ +RQ      + ++  R  L 
Sbjct: 1747 QLIVKESAKDELLKEGKVLPSEGMPGTRLFSICPAWYNIVVRQHFVYVAESVRKRRRTLS 1806

Query: 169  CQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGE 348
             QVG    SREW  + ARL     ++   CDYS FDGL+  Q++  I  +  +++  SG+
Sbjct: 1807 SQVGIVVGSREWDDLAARLRSKKNDKMYCCDYSKFDGLMTPQIVHAITGIYERMF--SGK 1864

Query: 349  SEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
              + Q  R N+LM +  R +  G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L 
Sbjct: 1865 DGMSQF-RQNLLMGICNRISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLV 1923

Query: 529  PKPEKCRFQQTVCLI 573
            P  E+  F   V LI
Sbjct: 1924 PDIERPFFSNNVVLI 1938

[79][TOP]
>UniRef100_UPI0000164A2C RNA-dependent RNA polymerase n=1 Tax=Grapevine fanleaf virus
           RepID=UPI0000164A2C
          Length = 335

 Score =  130 bits (327), Expect = 7e-29
 Identities = 70/151 (46%), Positives = 89/151 (58%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           LV IE PKDE L   KI     RLF ++PL YNL LR K  +F++ L   R  LPCQVG 
Sbjct: 190 LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVGI 249

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
           NPYSREW  +  RL    ++   NCDY AFDGL+  Q++  IA+MIN  Y       V  
Sbjct: 250 NPYSREWTDLYHRLGEL-SDVGYNCDYKAFDGLITEQILSTIADMINAGY----RDPVGN 304

Query: 364 AQRYNMLMALVGRYAFVGQKVFKVNCGLPSG 456
            QR N+L+A+ GR +  G +V+    G+PSG
Sbjct: 305 RQRKNLLLAICGRLSICGNQVYATEAGIPSG 335

[80][TOP]
>UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO
          Length = 280

 Score =  124 bits (310), Expect = 7e-27
 Identities = 63/142 (44%), Positives = 89/142 (62%)
 Frame = +1

Query: 91  LHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSA 270
           + YN+ +R+K   F +F    R  LP QVG NPYSREW  +  +L+  G N  + CDYS 
Sbjct: 1   MSYNIVIRKKFLNFVRFFMKRRDVLPAQVGINPYSREWTRMANKLLSKGNN-ILCCDYSR 59

Query: 271 FDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLP 450
           FDG L   ++  I NMI +L  +    EV +AQ  N+++A   RYA   + +++V  G+P
Sbjct: 60  FDGFLPKCIMNEIGNMIARLMKVD---EVSKAQIKNLMLACTSRYAMCNRVLYRVENGIP 116

Query: 451 SGFALTVVVNSVFNEILIRYAY 516
           SGF LTV+VNS+ NEIL++YAY
Sbjct: 117 SGFPLTVIVNSILNEILVKYAY 138

[81][TOP]
>UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus
           RepID=Q3YC01_9SECO
          Length = 795

 Score =  123 bits (309), Expect = 9e-27
 Identities = 66/177 (37%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ +ECPKDE +  +K+      RLF ++P  YNL +R+    F        +  P +VG
Sbjct: 294 LIGVECPKDERVARKKVTTKPKTRLFTVLPFEYNLLVREYFMDFVSKYMQRHNECPGKVG 353

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NP S EW ++   L   GTN   N D+  FDG+    V+  +   INKLY   G+++  
Sbjct: 354 INPQSIEWTNLYENLRSKGTNW-FNGDFERFDGITPRDVMVQLVIRINKLYK-RGDADRP 411

Query: 361 QAQRYNMLMALVG--RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            A +   L+ L+   RYA  G+ ++KV+CG+PSGF+LTV+VNS+ NE  +R+A++++
Sbjct: 412 LANKVRSLLMLMASDRYAIAGRNLYKVSCGIPSGFSLTVIVNSLVNEFFLRFAWKRI 468

[82][TOP]
>UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU
          Length = 2155

 Score =  119 bits (298), Expect = 2e-25
 Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 1/180 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +L   +C KDE LP  KI      RLFEI+P HYN+ +R+    F+  L ++ + +PC+V
Sbjct: 1299 DLFTTQCAKDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMSSHNAIPCKV 1358

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P S EW  +LA   R  +N   + DYS+FDG     + +   ++++  Y  +  S  
Sbjct: 1359 GIDPTSSEWS-LLANGFRAVSNIGFSADYSSFDGRAPVFIFQWFCDLVDDYYGSATGSPE 1417

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
              A R+ +LM     Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P
Sbjct: 1418 SNA-RHALLMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1476

[83][TOP]
>UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO
          Length = 2158

 Score =  116 bits (291), Expect = 1e-24
 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            ELV  +C KDE LP  K+      RLFEI+P HYN+ +R+    F+  L  + + LPC+V
Sbjct: 1296 ELVTTQCAKDERLPLEKVFGKRKTRLFEILPFHYNMLVRKYFLDFSASLMASHNALPCKV 1355

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NP   EW  +LA   R  ++   + DYS+FDG       +   ++++  Y     S  
Sbjct: 1356 GINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPD 1414

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
              A R+ +LM     Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P
Sbjct: 1415 SNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1473

[84][TOP]
>UniRef100_B1PM64 Polyprotein (Fragment) n=1 Tax=Tomato torrado virus
           RepID=B1PM64_9SECO
          Length = 910

 Score =  116 bits (291), Expect = 1e-24
 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
           ELV  +C KDE LP  K+      RLFEI+P HYN+ +R+    F+  L  + + LPC+V
Sbjct: 48  ELVATQCAKDERLPLEKVFGKRKTRLFEILPFHYNMLVRKYFLDFSASLMASHNALPCKV 107

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G NP   EW  +LA   R  ++   + DYS+FDG       +   ++++  Y     S  
Sbjct: 108 GINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPD 166

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
             A R+ +LM     Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P
Sbjct: 167 SNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 225

[85][TOP]
>UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO
          Length = 2158

 Score =  116 bits (291), Expect = 1e-24
 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            ELV  +C KDE LP  K+      RLFEI+P HYN+ +R+    F+  L  + + LPC+V
Sbjct: 1296 ELVTTQCAKDERLPLEKVFGKRKTRLFEILPFHYNMLVRKYFLDFSASLMASHNALPCKV 1355

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NP   EW  +LA   R  ++   + DYS+FDG       +   ++++  Y     S  
Sbjct: 1356 GINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWFCDLVDDYYGSPPGSPD 1414

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
              A R+ +LM     Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P
Sbjct: 1415 SNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1473

[86][TOP]
>UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO
          Length = 2151

 Score =  115 bits (289), Expect = 2e-24
 Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +LV  +C KDE LP  KI      RLFEI+P HYN+ +R+    F+  L    + +PC+V
Sbjct: 1297 DLVTTQCAKDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMALHNAIPCKV 1356

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P S EW  +LA   R  ++   + DYS+FDG       +   +++++ Y     S  
Sbjct: 1357 GIDPTSSEWT-LLANGFRAVSDVGFSADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPD 1415

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
              A R+ +LM     Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P
Sbjct: 1416 SNA-RHALLMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1474

[87][TOP]
>UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus
            RepID=A0N0G3_9VIRU
          Length = 1943

 Score =  115 bits (289), Expect = 2e-24
 Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +LV  +C KDE LP  KI      RLFEI+P HYN+ +R+    F+  L    + +PC+V
Sbjct: 1089 DLVTTQCAKDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMALHNAIPCKV 1148

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P S EW  +LA   R  ++   + DYS+FDG       +   +++++ Y     S  
Sbjct: 1149 GIDPTSSEWT-LLANGFRAVSDVGFSADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPD 1207

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
              A R+ +LM     Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P
Sbjct: 1208 SNA-RHALLMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 1266

[88][TOP]
>UniRef100_Q6A2S7 Polyprotein (Fragment) n=1 Tax=Arracacha virus B RepID=Q6A2S7_9SECO
          Length = 251

 Score =  114 bits (285), Expect = 5e-24
 Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 8/188 (4%)
 Frame = +1

Query: 13  IECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189
           I+ PKDE +   K++V    RLF I+P HYNL +R+    F   L    +  P +VG N 
Sbjct: 55  IDFPKDEKVMRAKVEVKPKVRLFTILPFHYNLVVRRFYLDFVARLMQKHNETPVKVGLNT 114

Query: 190 YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY------ALSGES 351
            S EW H+  +L   G N   N DYS FDG+    V++ +A  I+K Y       L  + 
Sbjct: 115 SSLEWQHLYDQLSAVGFNW-FNGDYSRFDGITPRCVLQGLAIRISKFYRQDEAQGLVPKK 173

Query: 352 EVQQAQRYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
           +++ +  +++L+ +   RY   G  V+KV+ G+PSGF LTV+VNS+ N   + +AYRKL 
Sbjct: 174 KIRTSVAHSLLLDMANSRYGIAGLGVYKVSSGIPSGFPLTVIVNSLVNSFFLHFAYRKLM 233

Query: 529 PKPEKCRF 552
            +  K  F
Sbjct: 234 SQSLKSHF 241

[89][TOP]
>UniRef100_UPI0001765C94 RNA-dependent RNA polymerase n=1 Tax=Tomato marchitez virus
           RepID=UPI0001765C94
          Length = 249

 Score =  108 bits (270), Expect = 3e-22
 Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
 Frame = +1

Query: 25  KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201
           KDE LP  KI      RLFEI+P HYN+ +R+    F+  L    + +PC+VG +P S E
Sbjct: 1   KDERLPLEKIYGKRKTRLFEILPFHYNMLVRKYFLDFSATLMALHNAIPCKVGIDPTSSE 60

Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
           W  +LA   R  ++   + DYS+FDG       +   +++++ Y     S    A R+ +
Sbjct: 61  WT-LLANGFRAVSDVGFSADYSSFDGRAPVFAFQWFCDLVDEYYGSKPGSPDSNA-RHAL 118

Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
           LM     Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P
Sbjct: 119 LMMASCHYTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRP 170

[90][TOP]
>UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus
           RepID=UPI0000164A61
          Length = 694

 Score =  107 bits (268), Expect = 5e-22
 Identities = 61/175 (34%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           ++ I C KDE    ++++ V   R+FEI+P HYN+ +R+    F QF+ +    LPC+VG
Sbjct: 199 IITIACAKDEKTKMKRVREVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVG 258

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            N YS+ W  + A   R   +   N DY+ FD      ++  IA+M++    L+G+    
Sbjct: 259 LNVYSKSWDTMHAEHNRFAYH--FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGREN 313

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
              R N++   V R   V + +++V  G PSGFALTV++NSV N+  + +A+RK+
Sbjct: 314 AIVRRNLMKMAVERRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 368

[91][TOP]
>UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO
          Length = 1915

 Score =  107 bits (268), Expect = 5e-22
 Identities = 61/175 (34%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ I C KDE    ++++ V   R+FEI+P HYN+ +R+    F QF+ +    LPC+VG
Sbjct: 1420 IITIACAKDEKTKMKRVREVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVG 1479

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             N YS+ W  + A   R   +   N DY+ FD      ++  IA+M++    L+G+    
Sbjct: 1480 LNVYSKSWDTMHAEHNRFAYH--FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGREN 1534

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
               R N++   V R   V + +++V  G PSGFALTV++NSV N+  + +A+RK+
Sbjct: 1535 AIVRRNLMKMAVERRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 1589

[92][TOP]
>UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO
          Length = 2163

 Score =  107 bits (266), Expect = 9e-22
 Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 5/194 (2%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +++ I C KDE     K+ +    R+FEI+P HYN+ +R+    F QF+    + LPC+V
Sbjct: 1480 KIITIACAKDEKTKLIKVYEKPKTRIFEILPYHYNILVRKYYLFFMQFIMRMHNVLPCKV 1539

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NP+S++W  + A   R       N DYS FD     Q++   A++I++L A   +   
Sbjct: 1540 GLNPFSQDWDEMHAEHTR--FEHHFNGDYSGFDTGTPRQLLLKFADLISELAA---DGRR 1594

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----L 525
             +  R N++   V R   V  +++ V  G PSGFALTV++NS+ N+  + +A+RK    +
Sbjct: 1595 NKVIRRNLMQLAVDRRILVLAELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMSRI 1654

Query: 526  APKPEKCRFQQTVC 567
            +P     R  +T C
Sbjct: 1655 SPSMVTYRVMRTHC 1668

[93][TOP]
>UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV
          Length = 2235

 Score =  102 bits (255), Expect = 2e-20
 Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 9/188 (4%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ I+ PKDE +   K+ +    RLF I+P+ YN+ +R+   +F   + T  + +P +VG
Sbjct: 1720 LIGIDFPKDEKVDSSKVYIKPKTRLFTILPVDYNILVRKYFLSFVSHIMTQHNTIPVKVG 1779

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY-------AL 339
             +  S EW  +  +L   GTN   N DYS FDG+    V++ I   INK Y         
Sbjct: 1780 IDCLSNEWSILYHQLRSKGTN-WFNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAIT 1838

Query: 340  SGESEVQQAQRYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
                 +      ++LM +   RY      ++ V  G+PSGF LTV+VNS+ N   I ++Y
Sbjct: 1839 DSNLSINSDLARSLLMDMASTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSY 1898

Query: 517  RKLAPKPE 540
             KL  + E
Sbjct: 1899 IKLMKREE 1906

[94][TOP]
>UniRef100_UPI0000163DC1 RNA-dependent RNA polymerase n=1 Tax=Maize chlorotic dwarf virus
           RepID=UPI0000163DC1
          Length = 612

 Score =  102 bits (254), Expect = 2e-20
 Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           +V +ECPKDE     KI +  A R F I+P   N+  RQ    F   + TNR +L CQVG
Sbjct: 213 VVTVECPKDERRKLSKIYEQPATRTFTILPPEINILFRQYFGDFAAMIMTNRSKLFCQVG 272

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NP + EW  ++   +   T+     DYS FDG+ + Q+   I  ++N  Y    + E  
Sbjct: 273 INPENMEWSDLMHEFLHKSTH-GFAGDYSKFDGIGDPQIYHSITQVVNNWY---DDGEEN 328

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
              R+ ++ +++ R   V + +F+   G+PSGFA+TV+ NS  N   +  A+  L
Sbjct: 329 ARTRHALISSIIHREGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNL 383

[95][TOP]
>UniRef100_O11979 Polyprotein n=2 Tax=Maize chlorotic dwarf virus RepID=O11979_9SECO
          Length = 3443

 Score =  102 bits (254), Expect = 2e-20
 Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            +V +ECPKDE     KI +  A R F I+P   N+  RQ    F   + TNR +L CQVG
Sbjct: 3044 VVTVECPKDERRKLSKIYEQPATRTFTILPPEINILFRQYFGDFAAMIMTNRSKLFCQVG 3103

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP + EW  ++   +   T+     DYS FDG+ + Q+   I  ++N  Y    + E  
Sbjct: 3104 INPENMEWSDLMHEFLHKSTH-GFAGDYSKFDGIGDPQIYHSITQVVNNWY---DDGEEN 3159

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
               R+ ++ +++ R   V + +F+   G+PSGFA+TV+ NS  N   +  A+  L
Sbjct: 3160 ARTRHALISSIIHREGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNL 3214

[96][TOP]
>UniRef100_B1A455 Replication-associated polyprotein (Fragment) n=1 Tax=Black raspberry
            necrosis virus RepID=B1A455_9SECO
          Length = 983

 Score =  102 bits (253), Expect = 3e-20
 Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQV 177
            +++ I C KDE     K+ +    R+FEI+P HYN+ +R+    F QF+    + LPC+V
Sbjct: 739  KIITIACAKDEKTKLVKVYEKPKTRIFEILPYHYNILVRKYYLFFMQFIMRMHNVLPCKV 798

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G NP+S++W  + A   +       N DYS FD     Q+    +++I+ L A   +   
Sbjct: 799  GLNPFSQDWDEMHAEHSK--FEHHFNGDYSGFDTGTPRQLSLKFSDLISDLAA---DGRR 853

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
             +  R N++   V R   V  +++ V  G PSGFALTV++NS+ N+  + +A+RK+
Sbjct: 854  NKVIRRNLMQLAVDRRILVLSELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKI 909

[97][TOP]
>UniRef100_Q80G77 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle
           virus RepID=Q80G77_9SECO
          Length = 182

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 56/157 (35%), Positives = 89/157 (56%)
 Frame = +1

Query: 55  KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234
           +V   R+FEI+P HYN+ +R+    F QF+ +    LPC+VG N YS+ W  + A   R 
Sbjct: 8   EVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRF 67

Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414
             +   N DY+ FD      ++  IA+M++    L+G+       R N++   V R   V
Sbjct: 68  AYH--FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGRENAIVRRNLMKMAVERRILV 122

Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +++V  G PSGFALTV++NSV N+  + +A+RK+
Sbjct: 123 LRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159

[98][TOP]
>UniRef100_Q6EEL1 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q6EEL1_9SECO
          Length = 3457

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ IEC KDE     KI +  A R F I+P   N+  RQ    F   + T R +L CQVG
Sbjct: 3058 VITIECAKDERRKLNKIYEKPATRTFTILPPEINILFRQYFGDFAAMVMTCRAKLFCQVG 3117

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP S EWG ++  L    T +    DYS FDG+ + Q+   I  ++N  Y    + E  
Sbjct: 3118 INPESMEWGDLMLGLKEKST-KGFAGDYSKFDGIGDPQIYHSITQVVNNWY---NDGEEN 3173

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
               R+ ++ +++ R   V + +F+   G+PSGFA+TV+ NS  N   +  A+  L
Sbjct: 3174 ATIRHALISSIIHRRGIVKEYLFQYCQGMPSGFAMTVIFNSFMNYYYLSLAWMNL 3228

[99][TOP]
>UniRef100_Q5MH31 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q5MH31_9SECO
          Length = 3481

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVG-ACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            +V +ECPKDE     KI    A R F I+P   N+  RQ    F   + TNR +L CQVG
Sbjct: 3082 VVTVECPKDERRKLNKIYDNPATRTFTILPPEINILFRQYFGDFAAMVMTNRAKLFCQVG 3141

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP + EW  ++   +   +++    DYS FDG+ + Q+   I  ++N  Y    + E  
Sbjct: 3142 INPENMEWSDLMHGFLSK-SSKGFAGDYSKFDGIGDPQIYHSITQVVNNWY---NDGEEN 3197

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
               R+ ++ +++ R   V + +F+   G+PSGFA+TV+ NS  N   +  A+  L
Sbjct: 3198 ARTRHALISSIIHREGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNL 3252

[100][TOP]
>UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus
           RepID=UPI000043F357
          Length = 707

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ I+ PKDE +   K+ +    RLF I+P+ YN+ +R+   +    + T  + +P +VG
Sbjct: 192 LIGIDFPKDEKVDSSKVYIKPKTRLFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVG 251

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYA-------- 336
            +  S EW  +  +L   GTN   N DYS FDG+    V++ I   INK Y         
Sbjct: 252 IDCLSNEWSILYHQLRSKGTNW-FNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAIT 310

Query: 337 ---LSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIR 507
              LS  S++ ++   +M      RY      ++ V  G+PSGF LTV+VNS+ N   I 
Sbjct: 311 DSNLSINSDLARSLLTDMAST---RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIH 367

Query: 508 YAYRKLAPKPE 540
           ++Y KL  + E
Sbjct: 368 FSYIKLMKREE 378

[101][TOP]
>UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling
           virus RepID=Q9YZ97_SDV
          Length = 872

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 57/170 (33%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
 Frame = +1

Query: 19  CPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195
           C KDE     K++V    R+FEI+P   N+ +R+    + Q L     +LP +VG N YS
Sbjct: 396 CAKDEKTTSHKVRVEPKTRIFEILPFQINIIIRRYFMFWMQLLMAAHDQLPSKVGLNVYS 455

Query: 196 REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375
             W  +L R  R   +     DYS FD      ++  I + IN+L   +G+SE+ Q  R 
Sbjct: 456 ESWDILLGRHTRLANH--FTGDYSGFDTSTPRILVYAIVDKINEL---AGDSEMNQRTRR 510

Query: 376 NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           N++  ++ RY      V++++ G PSGFA TV++NS+ NE  +++++  L
Sbjct: 511 NIIRFVLNRYLISDGYVYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGL 560

[102][TOP]
>UniRef100_Q80G75 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle
           virus RepID=Q80G75_9SECO
          Length = 182

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 55/152 (36%), Positives = 87/152 (57%)
 Frame = +1

Query: 70  RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249
           R+FEI+P HYN+ +R+    F QF+ +    LPC+VG N YS+ W  + A   R   +  
Sbjct: 13  RIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRFAYH-- 70

Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429
            N DY+ FD      ++  IA+M++    L+G+       R N++   V R   V + ++
Sbjct: 71  FNGDYTGFDTATPRVLMMKIADMVSN---LAGDGRENAIVRRNLMKMAVKRRILVLRDLY 127

Query: 430 KVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           +V  G PSGFALTV++NSV N+  + +A+RK+
Sbjct: 128 QVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159

[103][TOP]
>UniRef100_Q80G71 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle
           virus RepID=Q80G71_9SECO
          Length = 182

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 56/160 (35%), Positives = 91/160 (56%)
 Frame = +1

Query: 55  KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234
           +V   R+FEI+P HYN+ +R+    F QF+ +    LPC+VG N YS+ W  + A   R 
Sbjct: 8   EVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDSLPCKVGLNVYSKSWDTMHAEHNRF 67

Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414
             +   N DY+ FD      ++  IA+M+++L     E+ +    R N++   V R   V
Sbjct: 68  AYH--FNGDYTGFDTATPRVLMMRIADMVSELACDGRENAI---VRRNLMRMAVERRILV 122

Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            + +++V  G PSGFALTV++NSV N+  + +A+RK+  +
Sbjct: 123 LRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKITSR 162

[104][TOP]
>UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV
          Length = 2250

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ I+ PKDE +   K+ +    RLF I+P+ YN+ +R+   +    + T  + +P +VG
Sbjct: 1735 LIGIDFPKDEKVDSSKVYIKPKTRLFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVG 1794

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYA-------- 336
             +  S EW  +  +L   GTN   N DYS FDG+    V++ I   INK Y         
Sbjct: 1795 IDCLSNEWSILYHQLRSKGTNW-FNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSLAIT 1853

Query: 337  ---LSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIR 507
               LS  S++ ++   +M      RY      ++ V  G+PSGF LTV+VNS+ N   I 
Sbjct: 1854 DSNLSINSDLARSLLTDMAST---RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIH 1910

Query: 508  YAYRKLAPKPE 540
            ++Y KL  + E
Sbjct: 1911 FSYIKLMKREE 1921

[105][TOP]
>UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus
           RepID=UPI00004FF342
          Length = 675

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           +V ++  KDE LP  KI      RLF I+P+ YN  +R+   +F   L    + +P +VG
Sbjct: 195 IVGLDTAKDERLPLSKIYQDVKTRLFTILPMEYNYLVRKYFGSFVAELMKLHNCIPTKVG 254

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NP   +W  +  ++   GTN   N DYS FDG+    ++  I+N I KLY      +  
Sbjct: 255 INPLGYDWTILGKKMHAKGTNW-FNGDYSRFDGVTPRCLLIEISNRITKLYG-----DEH 308

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           + +R ++++A   R    G  +++V+ G+P GFALTV+VNS+ N  L+R+++  +
Sbjct: 309 RERRLHLMLAATTRLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHM 363

[106][TOP]
>UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus
            RepID=Q5G2U4_9SECO
          Length = 2227

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            +V ++  KDE LP  KI      RLF I+P+ YN  +R+   +F   L    + +P +VG
Sbjct: 1747 IVGLDTAKDERLPLSKIYQDVKTRLFTILPMEYNYLVRKYFGSFVAELMKLHNCIPTKVG 1806

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP   +W  +  ++   GTN   N DYS FDG+    ++  I+N I KLY      +  
Sbjct: 1807 INPLGYDWTILGKKMHAKGTNW-FNGDYSRFDGVTPRCLLIEISNRITKLYG-----DEH 1860

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +R ++++A   R    G  +++V+ G+P GFALTV+VNS+ N  L+R+++  +
Sbjct: 1861 RERRLHLMLAATTRLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHM 1915

[107][TOP]
>UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus
           RepID=UPI0000164A53
          Length = 709

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           ++ I+ PKDE +   K+ +    RLF I+P+ YN+ +R+   +F   L    + +P +VG
Sbjct: 192 VIGIDFPKDEKVDSSKVYIKQKTRLFTILPVDYNILVRKYFLSFVSQLMALHNEVPTKVG 251

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            +P S EW  +   L   GTN   N DYS FDG+    V++ I   I++ YA      + 
Sbjct: 252 IDPISNEWSILCHSLHSKGTN-WFNGDYSRFDGITPRNVLQGIVKRISRRYANKSSFAIT 310

Query: 361 QAQ-------RYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
                       ++LM +   RY      ++ V  G+PSGF LTV+VNS+ N   + +AY
Sbjct: 311 DPTLSINGDLARSLLMDMCSTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAY 370

Query: 517 RKL 525
            KL
Sbjct: 371 MKL 373

[108][TOP]
>UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus
            RepID=Q9JGP2_9SECO
          Length = 2079

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 9/183 (4%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ I+ PKDE +   K+ +    RLF I+P+ YN+ +R+   +F   L    + +P +VG
Sbjct: 1562 VIGIDFPKDEKVDSSKVYIKQKTRLFTILPVDYNILVRKYFLSFVSQLMALHNEVPTKVG 1621

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             +P S EW  +   L   GTN   N DYS FDG+    V++ I   I++ YA      + 
Sbjct: 1622 IDPISNEWSILCHSLHSKGTN-WFNGDYSRFDGITPRNVLQGIVKRISRRYANKSSFAIT 1680

Query: 361  QAQ-------RYNMLMALVG-RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
                        ++LM +   RY      ++ V  G+PSGF LTV+VNS+ N   + +AY
Sbjct: 1681 DPTLSINGDLARSLLMDMCSTRYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAY 1740

Query: 517  RKL 525
             KL
Sbjct: 1741 MKL 1743

[109][TOP]
>UniRef100_Q80G72 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle
           virus RepID=Q80G72_9SECO
          Length = 182

 Score = 98.2 bits (243), Expect = 4e-19
 Identities = 55/157 (35%), Positives = 90/157 (57%)
 Frame = +1

Query: 55  KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234
           +V   R+FEI+P HYN+ +R+    F QF+ +    LPC+VG N YS+ W  + A   R 
Sbjct: 8   EVPKTRIFEILPFHYNILVRKYYLFFMQFVMSLHDFLPCKVGLNVYSKSWDTMHAEHNRF 67

Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414
             +   N DY+ FD      ++  IA+M+++   L+G+       R N++   V R   V
Sbjct: 68  AYH--FNGDYTGFDTATPRVLMMRIADMVSE---LAGDGRENAIVRRNLMKMAVERRILV 122

Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +++V  G PSGFALTV++NSV N+  + +A+R++
Sbjct: 123 LRDLYQVRGGTPSGFALTVIINSVVNQFYLMWAWRRI 159

[110][TOP]
>UniRef100_B6UIR8 Polyprotein n=1 Tax=Carrot necrotic dieback virus RepID=B6UIR8_9SECO
          Length = 3015

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE     KI      RLF I+P+ +N+  R+    F  F+  NRH+    VG
Sbjct: 2428 LISIECPKDERRALDKIYDKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKRGIMVG 2487

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP+SREW   LA  +   +    N D++ FDG+ +    + +A + N  Y        Q
Sbjct: 2488 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPTSFDMVAELANIFY-----GGFQ 2541

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
              +R ++  AL  R++ V   V +++ G PSGF +TV+ NS  N   ++ A+  LA
Sbjct: 2542 SDERTSLTKALTNRFSLVKGGVLRISGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 2597

[111][TOP]
>UniRef100_Q80G70 RNA dependent RNA polymerase (Fragment) n=1 Tax=Strawberry mottle
           virus RepID=Q80G70_9SECO
          Length = 182

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 56/157 (35%), Positives = 89/157 (56%)
 Frame = +1

Query: 55  KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRP 234
           +V   R+FEI+P HYN+ +R+    F QF+ +    LPC+VG N YS+ W  + A   R 
Sbjct: 8   EVPKTRIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRF 67

Query: 235 GTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFV 414
             +   N DY+ FD      ++  IA+M++ L     E+ +    R N++   V R   V
Sbjct: 68  AYH--FNGDYTGFDTATPRVLMMRIADMVSDLACDGRENAI---VRRNLMRMAVERRILV 122

Query: 415 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
            + +++V  G PSGFALTV++NSV N+  + +A+RK+
Sbjct: 123 LRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159

[112][TOP]
>UniRef100_Q80G73 RNA dependent RNA polymerase (Fragment) n=3 Tax=Strawberry mottle
           virus RepID=Q80G73_9SECO
          Length = 182

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 55/152 (36%), Positives = 87/152 (57%)
 Frame = +1

Query: 70  RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249
           R+FEI+P HYN+ +R+    F QF+ +    LPC+VG N YS+ W  + A   R   +  
Sbjct: 13  RIFEILPFHYNILVRKYYLFFMQFIMSLHDFLPCKVGLNVYSKSWDTMHAEHNRFAYH-- 70

Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429
            N DY+ FD      ++  IA+M++ L     E+ +    R N++   V R   V + ++
Sbjct: 71  FNGDYTGFDTATPRVLMMRIADMVSDLACDGRENAI---VRRNLMKMAVERRILVLRDLY 127

Query: 430 KVNCGLPSGFALTVVVNSVFNEILIRYAYRKL 525
           +V  G PSGFALTV++NSV N+  + +A+RK+
Sbjct: 128 QVKGGTPSGFALTVIINSVVNQFYLMWAWRKI 159

[113][TOP]
>UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus
           RepID=UPI0000164A59
          Length = 682

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
 Frame = +1

Query: 19  CPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195
           C KDE    +K++V    R+FEI+P   N+ +R+    + Q L      LP +VG N YS
Sbjct: 207 CAKDEKTAPKKVRVQPKTRIFEILPFQINIIIRRYLMFWMQLLMVAHDELPSKVGINVYS 266

Query: 196 REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375
             W  +L R  R   +     DYS FD      ++  I + IN+L   + + EV Q  R 
Sbjct: 267 ESWDRLLGRHTRLANH--FTGDYSGFDTSTPRVLVYAIIDKINEL---ADDGEVNQRTRR 321

Query: 376 NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
           N++  ++ RY      +++++ G PSGFA TV++NSV NE  +++++
Sbjct: 322 NIIRFVLNRYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSW 368

[114][TOP]
>UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV
          Length = 2081

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
 Frame = +1

Query: 19   CPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195
            C KDE    +K++V    R+FEI+P   N+ +R+    + Q L      LP +VG N YS
Sbjct: 1606 CAKDEKTAPKKVRVQPKTRIFEILPFQINIIIRRYLMFWMQLLMVAHDELPSKVGINVYS 1665

Query: 196  REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375
              W  +L R  R   +     DYS FD      ++  I + IN+L   + + EV Q  R 
Sbjct: 1666 ESWDRLLGRHTRLANH--FTGDYSGFDTSTPRVLVYAIIDKINEL---ADDGEVNQRTRR 1720

Query: 376  NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            N++  ++ RY      +++++ G PSGFA TV++NSV NE  +++++
Sbjct: 1721 NIIRFVLNRYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSW 1767

[115][TOP]
>UniRef100_UPI0000167D17 RNA-dependent RNA polymerase n=1 Tax=Parsnip yellow fleck virus
           RepID=UPI0000167D17
          Length = 813

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IECPKDE     KI +    RLF I+P+ +N+  R+    F  F+  NRH+    VG
Sbjct: 223 LICIECPKDERRALDKIYEKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKHGIMVG 282

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NP+SREW   LA  +   +    N D++ FDG+ +      ++ + N  Y         
Sbjct: 283 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPSSFSMVSELANIFY-----GNFL 336

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
             +R N+   L  R++ +   + +V  G PSGF +TV+ NS  N   ++ A+  LA
Sbjct: 337 STERDNLTRMLTNRFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 392

[116][TOP]
>UniRef100_Q05057 Probable RNA-directed RNA polymerase n=1 Tax=Parsnip yellow fleck
            virus (isolate P-121) RepID=POLG_PYFV1
          Length = 3027

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 1/176 (0%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            L+ IECPKDE     KI +    RLF I+P+ +N+  R+    F  F+  NRH+    VG
Sbjct: 2437 LICIECPKDERRALDKIYEKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKHGIMVG 2496

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP+SREW   LA  +   +    N D++ FDG+ +      ++ + N  Y         
Sbjct: 2497 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPSSFSMVSELANIFY-----GNFL 2550

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
              +R N+   L  R++ +   + +V  G PSGF +TV+ NS  N   ++ A+  LA
Sbjct: 2551 STERDNLTRMLTNRFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 2606

[117][TOP]
>UniRef100_Q0PWW6 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Lettuce mottle
           virus RepID=Q0PWW6_9VIRU
          Length = 292

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 1/176 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGA-CRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IE PKDE    +KI      RLF I+P+ +N+  R+    F      NRH+    VG
Sbjct: 68  LICIESPKDERRALKKIYTEPKTRLFSILPVEFNMHARRLYLDFNVVTMANRHKHGIMVG 127

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NP+SREW   LA  +   +    N D++ FDG+ +    + + ++ NK Y   G+S  +
Sbjct: 128 INPHSREWTE-LALGLASFSPIGFNGDFANFDGMFHPDAFDMVCDLANKFY---GDS--R 181

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
            A+R  +  AL  R + V   V  +  G PSGF +TV+ NS  N   ++ A+ +LA
Sbjct: 182 GAERKCLTEALTNRLSLVKGSVLSIGGGGPSGFPMTVIFNSFINLFYLQAAWIQLA 237

[118][TOP]
>UniRef100_UPI0000163D77 RNA-dependent RNA polymerase n=1 Tax=Rice tungro spherical virus
           RepID=UPI0000163D77
          Length = 621

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           ++ +EC KDE     KI +  A R F I+    N+  RQ    F   + + R     QVG
Sbjct: 224 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 283

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NP S EW  ++  L+R  T +    DYS FDG+ +  +   I N++N  Y    + EV 
Sbjct: 284 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---NDGEVN 339

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525
              R++++ ++V R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L
Sbjct: 340 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 399

Query: 526 APKPEKCRFQQTVCLI 573
                 C+   T C I
Sbjct: 400 LSPQGSCKDFDTYCKI 415

[119][TOP]
>UniRef100_Q83034 Probable RNA-directed RNA polymerase n=2 Tax=Rice tungro spherical
            virus RepID=POLG_RTSVA
          Length = 3473

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ +EC KDE     KI +  A R F I+    N+  RQ    F   + + R     QVG
Sbjct: 3076 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3135

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP S EW  ++  L+R  T +    DYS FDG+ +  +   I N++N  Y    + EV 
Sbjct: 3136 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---NDGEVN 3191

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525
               R++++ ++V R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L
Sbjct: 3192 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3251

Query: 526  APKPEKCRFQQTVCLI 573
                  C+   T C I
Sbjct: 3252 LSPQGSCKDFDTYCKI 3267

[120][TOP]
>UniRef100_Q98645 ORF1 protein (Fragment) n=1 Tax=Rice tungro spherical virus
            RepID=Q98645_9SECO
          Length = 1619

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ +EC KDE     KI +  A R F I+    N+  RQ    F   + + R     QVG
Sbjct: 1221 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 1280

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP S EW  ++  L+R  T +    DYS FDG+ +  +   I N++N  Y    + EV 
Sbjct: 1281 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---DDGEVN 1336

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525
               R++++ ++V R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L
Sbjct: 1337 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 1396

Query: 526  APKPEKCRFQQTVCLI 573
                  C+   T C I
Sbjct: 1397 LSPQGSCKDFDTYCKI 1412

[121][TOP]
>UniRef100_Q91PP5 Probable RNA-directed RNA polymerase n=1 Tax=Rice tungro spherical
            virus (isolate Vt6) RepID=POLG_RTSVT
          Length = 3471

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ +EC KDE     KI +  A R F I+    N+  RQ    F   + + R     QVG
Sbjct: 3073 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3132

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP S EW  ++  L+R  T +    DYS FDG+ +  +   I N++N  Y    + EV 
Sbjct: 3133 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVNAWY---DDGEVN 3188

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525
               R++++ ++V R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L
Sbjct: 3189 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3248

Query: 526  APKPEKCRFQQTVCLI 573
                  C+   T C I
Sbjct: 3249 LSPQGSCKDFDTYCKI 3264

[122][TOP]
>UniRef100_Q1MNG5 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG5_9SECO
          Length = 3471

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ +EC KDE     KI +  A R F I+    N+  RQ    F   + + R     QVG
Sbjct: 3073 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3132

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP S EW  ++  L+R  T +    DYS FDG+ +  +   I N+++  Y    + EV 
Sbjct: 3133 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVDAWY---DDGEVN 3188

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525
               R++++ ++V R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L
Sbjct: 3189 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3248

Query: 526  APKPEKCRFQQTVCLI 573
                  C+   T C I
Sbjct: 3249 LSPQGSCKDFDTYCKI 3264

[123][TOP]
>UniRef100_Q1MNG4 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG4_9SECO
          Length = 3471

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 6/196 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++ +EC KDE     KI +  A R F I+    N+  RQ    F   + + R     QVG
Sbjct: 3073 IMTMECLKDERRKLAKIYEKPATRTFTILSPEVNILFRQYFGDFAAMVMSTRREHFSQVG 3132

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP S EW  ++  L+R  T +    DYS FDG+ +  +   I N+++  Y    + EV 
Sbjct: 3133 INPESMEWSDLINSLLRVNT-KGFAGDYSKFDGIGSPAIYHSIVNVVDAWY---DDGEVN 3188

Query: 361  QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKL 525
               R++++ ++V R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L
Sbjct: 3189 ARARHSLISSIVHRDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSL 3248

Query: 526  APKPEKCRFQQTVCLI 573
                  C+   T C I
Sbjct: 3249 LSPQGSCKDFDTYCKI 3264

[124][TOP]
>UniRef100_Q91NQ2 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q91NQ2_9VIRU
          Length = 2107

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 53/164 (32%), Positives = 84/164 (51%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
            KDE  P +K++    R+F        L LR+   +F   + TNR      +G N YS +W
Sbjct: 1762 KDERRPLKKVQANKTRVFAASNQGLALALRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821

Query: 205  GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
              I+ +L R G ++ I  D+S FDG LN+Q++  ++ ++   Y   G+       R+ +L
Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877

Query: 385  MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
              L      +  KVF++N   PSG  LT ++N V+N I+ RY Y
Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921

[125][TOP]
>UniRef100_Q1LZW4 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q1LZW4_9VIRU
          Length = 2107

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 53/164 (32%), Positives = 83/164 (50%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
            KDE  P  K++    R+F        L LR+   +F   + TNR      +G N YS +W
Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALALRRYYLSFLDHVMTNRIDNEISLGVNVYSYDW 1821

Query: 205  GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
              I+ +L R G ++ I  D+S FDG LN+Q++  ++ ++   Y   G+       R+ +L
Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877

Query: 385  MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
              L      +  KVF++N   PSG  LT ++N V+N I+ RY Y
Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921

[126][TOP]
>UniRef100_Q4JFT3 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q4JFT3_9VIRU
          Length = 2107

 Score = 85.1 bits (209), Expect = 3e-15
 Identities = 53/164 (32%), Positives = 83/164 (50%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
            KDE  P  K++    R+F        L LR+   +F   + TNR      +G N YS +W
Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALALRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821

Query: 205  GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
              I+ +L R G ++ I  D+S FDG LN+Q++  ++ ++   Y   G+       R+ +L
Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877

Query: 385  MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
              L      +  KVF++N   PSG  LT ++N V+N I+ RY Y
Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921

[127][TOP]
>UniRef100_Q5DM98 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q5DM98_9VIRU
          Length = 2107

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 52/164 (31%), Positives = 83/164 (50%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
            KDE  P  K++    R+F        L +R+   +F   + TNR      +G N YS +W
Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALAIRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821

Query: 205  GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
              I+ +L R G ++ I  D+S FDG LN+Q++  ++ ++   Y   G+       R+ +L
Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877

Query: 385  MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
              L      +  KVF++N   PSG  LT ++N V+N I+ RY Y
Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921

[128][TOP]
>UniRef100_Q09X76 Nonstructural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q09X76_9VIRU
          Length = 2107

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 52/164 (31%), Positives = 82/164 (50%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
            KDE  P  K++    R+F        L  R+   +F   + TNR      +G N YS +W
Sbjct: 1762 KDERRPLEKVQANKTRVFAASNQGLALAQRRYYLSFLDHVMTNRIDNEIGLGVNVYSYDW 1821

Query: 205  GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
              I+ +L R G ++ I  D+S FDG LN+Q++  ++ ++   Y   G+       R+ +L
Sbjct: 1822 TRIVNKLKRVG-DKVIAGDFSNFDGSLNSQILSRVSEIVTDWY---GDDAENGLIRHTLL 1877

Query: 385  MALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
              L      +  KVF++N   PSG  LT ++N V+N I+ RY Y
Sbjct: 1878 EYLFNATWLMNGKVFQLNHSQPSGNPLTTLINCVYNMIIFRYVY 1921

[129][TOP]
>UniRef100_A6NA62 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato torrado
           virus RepID=A6NA62_9SECO
          Length = 216

 Score = 82.8 bits (203), Expect = 2e-14
 Identities = 48/136 (35%), Positives = 72/136 (52%)
 Frame = +1

Query: 130 FTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECI 309
           F+  L  + + LPC+VG NP   EW  +LA   R  ++   + DYS+FDG       +  
Sbjct: 1   FSASLMASHNALPCKVGINPGGIEWT-LLANGFRAVSDTGFSADYSSFDGRAPIFAFQWF 59

Query: 310 ANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVF 489
            ++++  Y     S    A R+ +LM     Y     KVF++  G+PSGFALTV+ NS+ 
Sbjct: 60  CDLVDDYYGSPPGSPDSNA-RHVLLMMASCHYTICENKVFRLVGGMPSGFALTVIFNSLL 118

Query: 490 NEILIRYAYRKLAPKP 537
           NE  +RYA+  L  +P
Sbjct: 119 NEFYMRYAFISLLRRP 134

[130][TOP]
>UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus
            RepID=Q9IJX4_CRPV
          Length = 1771

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            ++V ++  KDE  P  K+  G  R+F   P H+ +  R+    F  +L  NR      VG
Sbjct: 1416 DVVFVDTLKDERRPIEKVDAGKTRVFSAGPQHFVVAFRKYFLPFAAYLMNNRIDNEIAVG 1475

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVI-ECIANMINKLYALSGESEV 357
            TN YS +W  I  RL + G N+ I  D+  FDG L AQ   +         +    +   
Sbjct: 1476 TNVYSTDWERIAKRLKKHG-NKVIAGDFGNFDGSLVAQFFGQSCGKSFYPWFKTFNDVNT 1534

Query: 358  QQAQRYNMLMALVGRYAFV-------GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            +  +R   LM  +G +  +       G  V+      PSG   TV++N ++N +++R  +
Sbjct: 1535 EDGKR--NLMICIGLWTHIVHSVHSYGDNVYMWTHSQPSGNPFTVIINCLYNSMIMRIVW 1592

Query: 517  ----RKLAPKPEKC-RFQQTVCLI 573
                RKLAP+ +   +F++ V +I
Sbjct: 1593 ILLARKLAPEMQSMKKFRENVSMI 1616

[131][TOP]
>UniRef100_A5A104 Polyprotein n=1 Tax=Brevicoryne brassicae picorna-like virus
            RepID=A5A104_9VIRU
          Length = 2983

 Score = 77.4 bits (189), Expect = 7e-13
 Identities = 55/168 (32%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
 Frame = +1

Query: 16   ECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            +C KD  LP  KIK+ G  R+F I P+ + +  RQ    F       R      +G N +
Sbjct: 2642 DCLKDARLPLSKIKIPGKVRVFSISPVDFTIQFRQYFLDFIASYTKARFNCEHAIGINVH 2701

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
              EW   LA        + I  DYS F   LN++V+     +I K Y   G S      R
Sbjct: 2702 GYEWSE-LAHFFEG--KKLITGDYSGFGPSLNSEVVTAAFRIICKWYKQYGCSVEDNHIR 2758

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
              M   L+     +   +++V CGLPSG   TV+ NS+ N I IR A+
Sbjct: 2759 MMMSKELINAKHLMRDYLYEVQCGLPSGNPATVIFNSIVNSIYIRCAW 2806

[132][TOP]
>UniRef100_Q9WCE9 Polyprotein n=1 Tax=Sacbrood virus RepID=Q9WCE9_9VIRU
          Length = 2858

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
 Frame = +1

Query: 13   IECPKDEL-LPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189
            I+  KDE  LPE+  K G  R+F   P+ Y + +RQ    F       R +L   VG N 
Sbjct: 2519 IDTLKDERKLPEKVRKYGGTRVFCNPPIDYIVSMRQYYMHFVAAFMEQRFKLMHAVGINV 2578

Query: 190  YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ 369
             S EW  + ++L+  G N     DYS F    NAQ+ +    ++ + + +     V + +
Sbjct: 2579 QSTEWTLLASKLLAKG-NNICTIDYSNFGPGFNAQIAKAAMELMVR-WTMEHVEGVNEIE 2636

Query: 370  RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
             Y +L   +     V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+
Sbjct: 2637 AYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKER 2694

[133][TOP]
>UniRef100_Q8QY61 Polyprotein n=1 Tax=Sacbrood virus RepID=Q8QY61_9VIRU
          Length = 2860

 Score = 76.6 bits (187), Expect = 1e-12
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
 Frame = +1

Query: 13   IECPKDEL-LPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNP 189
            I+  KDE  LPE+  K G  R+F   P+ Y + +RQ    F       R +L   VG N 
Sbjct: 2521 IDTLKDERKLPEKVRKYGGTRVFCNPPIDYIVSMRQYYMHFVAAFMEQRFKLMHAVGINV 2580

Query: 190  YSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQ 369
             S EW  + ++L+  G N     DYS F    NAQ+ +    ++ + + +     V + +
Sbjct: 2581 QSTEWTLLASKLLAKG-NNICTIDYSNFGPGFNAQIAKAAMELMVR-WTMEHVEGVNEIE 2638

Query: 370  RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK 543
             Y +L   +     V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+
Sbjct: 2639 AYTLLHECLNSVHLVSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKER 2696

[134][TOP]
>UniRef100_O56050 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
            RepID=O56050_9VIRU
          Length = 1998

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            E+V  +  KD+ +   K   G  RLF   P+HY + LR+    F   L   R R    VG
Sbjct: 1622 EIVWTDTLKDQKIAIAKANAGKTRLFSAAPMHYAIALRKVCAPFVAHLSRMRIRNTICVG 1681

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP+S EW  +  +L+  G +  I  DYS FDG L AQ++     ++   Y L+   +  
Sbjct: 1682 VNPFSSEWSAVAQKLLVKGPH-VIAGDYSNFDGSLPAQLVYAATEIMADWYDLNW--DYV 1738

Query: 361  QAQRYNML---MALVGRYAFV-------------------GQKVFKVNCGLPSGFALTVV 474
            +A + N++   + L   Y                      G  ++ V  G+PSG  +T  
Sbjct: 1739 EAHKRNVVGGQVLLKDEYLDYLRRLYYECVHHLHIMNFKQGSLMYYVRNGIPSGCPVTAP 1798

Query: 475  VNSVFNEILIRYAYRKLAPKPEK 543
            +NS+ N++ + Y +  +   P K
Sbjct: 1799 LNSIVNQMALVYCWYHIIDDPLK 1821

[135][TOP]
>UniRef100_A9QXE1 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
            RepID=A9QXE1_9VIRU
          Length = 1998

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
            E+V  +  KD+ +   K   G  RLF   P+HY + LR+    F   L   R R    VG
Sbjct: 1622 EIVWTDTLKDQKIAIAKANAGKTRLFSAAPMHYAIALRKVCAPFVAHLSRMRIRNTICVG 1681

Query: 181  TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
             NP+S EW  +  +L+  G +  I  DYS FDG L AQ++     ++   Y L+   +  
Sbjct: 1682 VNPFSSEWSAVAQKLLVKGPH-VIAGDYSNFDGSLPAQLVYAATEIMADWYDLNW--DYV 1738

Query: 361  QAQRYNML---MALVGRYAFV-------------------GQKVFKVNCGLPSGFALTVV 474
            +A + N++   + L   Y                      G  ++ V  G+PSG  +T  
Sbjct: 1739 EAHKRNVVGGQVLLKDEYLDYLRRLYYECVHHLHIMNFKQGSLMYYVRNGIPSGCPVTAP 1798

Query: 475  VNSVFNEILIRYAYRKLAPKPEK 543
            +NS+ N++ + Y +  +   P K
Sbjct: 1799 LNSIVNQMALIYCWYHIIDDPLK 1821

[136][TOP]
>UniRef100_Q5Y975 Nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 1
            RepID=Q5Y975_9VIRU
          Length = 1396

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 48/168 (28%), Positives = 75/168 (44%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +NL  R+    F   L  NR      +GTN Y
Sbjct: 1049 VDTLKDERRPIEKVDALKTRVFSNGPMDFNLAFRKYFLGFIAHLMENRIDNEVAIGTNVY 1108

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            SR+W  +  +L + G N     D+S FDG LNA ++   A M N+ Y      +     R
Sbjct: 1109 SRDWTKLAKKLKQKGKN-VFAGDFSNFDGSLNAMIMYLFARMANEFY-----DDGNDLIR 1162

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            Y ++  ++       Q  + +    PSG   T  +N + N I +R  +
Sbjct: 1163 YVLIEEILNSVHLCEQFFYMMTHSQPSGNPATTPLNCLINSIGLRLCF 1210

[137][TOP]
>UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU
          Length = 1759

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            ++ ++  KDE     K+ VG  R+F   P H+ +  RQ    F  +L  NR      VGT
Sbjct: 1405 VIFVDTLKDERRDIAKVNVGKTRVFSAGPQHFVVAFRQYFLPFAAWLMHNRISNEVAVGT 1464

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
            N YS +W  I  RL   G++  I  D+  FDG L AQ++  I   I  ++ L    +++ 
Sbjct: 1465 NVYSSDWERIAKRLKTKGSH-VIAGDFGNFDGSLVAQILWAIFWEIFVVW-LKQFIDIEN 1522

Query: 364  AQRYNMLMALVGRYAFV-------GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
            ++   +L   +G ++ +          V+      PSG   TV++N ++N I++R ++ +
Sbjct: 1523 SEGKRILCICLGLWSHLVHSVHIYEDNVYMWTHSQPSGNPFTVIINCLYNSIIMRLSWIR 1582

Query: 523  LAPK 534
            +  K
Sbjct: 1583 VMEK 1586

[138][TOP]
>UniRef100_B3TZL6 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees
            RepID=B3TZL6_9VIRU
          Length = 1950

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 46/168 (27%), Positives = 78/168 (46%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1612 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1671

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R
Sbjct: 1672 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGAENSL---IR 1727

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            + +LM +          V+ +    PSG   T  +N   N + +R  +
Sbjct: 1728 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1775

[139][TOP]
>UniRef100_Q80AG3 Non-structural polyprotein n=1 Tax=Kashmir bee virus
            RepID=Q80AG3_9VIRU
          Length = 1933

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 48/174 (27%), Positives = 80/174 (45%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1595 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1654

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R
Sbjct: 1655 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IR 1710

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            + +LM +          V+ +    PSG   T  +N   N + +R  +   A K
Sbjct: 1711 HVLLMDVYNSVHVCNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 1764

[140][TOP]
>UniRef100_Q0PWW7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Dandelion yellow
           mosaic virus RepID=Q0PWW7_9VIRU
          Length = 262

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 45/153 (29%), Positives = 72/153 (47%)
 Frame = +1

Query: 70  RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249
           RLF I+P+ +N+  R+    F      NRH+    VG NP+SREW   +A  +   +   
Sbjct: 14  RLFSILPVEFNMHARRLYLDFNVLTMANRHKHGIMVGINPHSREWTE-MAISLASFSPLG 72

Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429
            N D++ FDG+ +      +  +    Y   G + +   +R  +  +L  R + V   V 
Sbjct: 73  FNGDFANFDGMFHPDSFAMVEELATYFY--RGHNAL---ERKTLTESLTNRLSLVKGAVL 127

Query: 430 KVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
            +  G PSGF +TV+ NS  N   +  A+  LA
Sbjct: 128 SIGGGGPSGFPMTVIFNSYINLFYLMSAWSHLA 160

[141][TOP]
>UniRef100_Q5S8C7 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees
            RepID=Q5S8C7_9VIRU
          Length = 1900

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/168 (26%), Positives = 77/168 (45%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1562 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1621

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    + +     R
Sbjct: 1622 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY---DDGKENNLIR 1677

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            + +LM +          V+ +    PSG   T  +N   N + +R  +
Sbjct: 1678 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1725

[142][TOP]
>UniRef100_B3TZL4 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees
            RepID=B3TZL4_9VIRU
          Length = 1950

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/168 (26%), Positives = 77/168 (45%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1612 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1671

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    + +     R
Sbjct: 1672 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY---DDGKENNLIR 1727

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            + +LM +          V+ +    PSG   T  +N   N + +R  +
Sbjct: 1728 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1775

[143][TOP]
>UniRef100_B3TZF0 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees
            RepID=B3TZF0_9VIRU
          Length = 1950

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 46/168 (27%), Positives = 78/168 (46%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1612 VDTLKDERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVY 1671

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R
Sbjct: 1672 SQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGAENGL---IR 1727

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            + +LM +          V+ +    PSG   T  +N   N + +R  +
Sbjct: 1728 HVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCF 1775

[144][TOP]
>UniRef100_Q9DSN9 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q9DSN9_9VIRU
          Length = 1906

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 47/174 (27%), Positives = 79/174 (45%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1563 VDTLKDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVY 1622

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L   G  + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R
Sbjct: 1623 SQDWNKTVRKLKTMGP-KVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGSENAL---IR 1678

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            + +LM +       G  V+ +    PSG   T  +N   N + +R  +   + K
Sbjct: 1679 HVLLMDVYNSTHICGDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKK 1732

[145][TOP]
>UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B
            RepID=A7KCA2_9VIRU
          Length = 1614

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
            KDE +  +K KVG  R+F    + + L +R+   +F + LQ  R       GT   S EW
Sbjct: 1146 KDEPVSFKKAKVGKTRVFTGATMDWYLIVRKYLLSFARLLQNERFAFEAAPGTIAQSLEW 1205

Query: 205  GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
              +   +++ G +  I  DY AFD  ++ + I    ++I     LSG    +  Q   ++
Sbjct: 1206 HELYDYVVKNGEDRVIAGDYKAFDKRMSPKEILAAFDIIIYFCQLSGNYSEEDIQ---II 1262

Query: 385  MALVGRYAFV----GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRF 552
              +    AF        + ++    PSG  LTV++NS+ N + +RY Y  L P+     F
Sbjct: 1263 RCIAEDTAFALVDYNGDLVQLYGSNPSGNPLTVILNSIVNSLRMRYVYFMLNPEHTVTTF 1322

Query: 553  QQTVCLI 573
            +  V L+
Sbjct: 1323 KDNVNLM 1329

[146][TOP]
>UniRef100_Q0PWW5 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Lettuce mottle
           virus RepID=Q0PWW5_9VIRU
          Length = 187

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 44/133 (33%), Positives = 69/133 (51%)
 Frame = +1

Query: 130 FTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECI 309
           F      NRH+    VG NP+SREW   LA  +   +    N D++ FDG+ + +  + +
Sbjct: 6   FNVVTMANRHKHGIMVGINPHSREWTE-LALGLASFSPIGFNGDFANFDGMFHPEAFDMV 64

Query: 310 ANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVF 489
            ++ NK Y   G+S  + A+R  +  AL  R + V   V  +  G PSGF +TV+ NS  
Sbjct: 65  CDLANKFY---GDS--RGAERKCLTEALTNRLSLVKGSVLSIGGGGPSGFPMTVIFNSFI 119

Query: 490 NEILIRYAYRKLA 528
           N   ++ A+ +LA
Sbjct: 120 NLFYLQAAWIQLA 132

[147][TOP]
>UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring
           virus RepID=B4ZF31_9SECO
          Length = 73

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1

Query: 451 SGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 573
           SGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF  TVCL+
Sbjct: 1   SGFALTVVVNSVFNEILIRYAYKKLAPVPERNRFGSTVCLL 41

[148][TOP]
>UniRef100_Q8BDE1 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q8BDE1_9VIRU
          Length = 1904

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 47/174 (27%), Positives = 79/174 (45%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1561 VDTLKDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVY 1620

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L   G  + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R
Sbjct: 1621 SQDWNKTVRKLKTMGP-KVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IR 1676

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            + +LM +       G  V+ +    PSG   T  +N   N + +R  +   + K
Sbjct: 1677 HVLLMDVYNSTHICGDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKK 1730

[149][TOP]
>UniRef100_Q8B3M2 Polyprotein n=1 Tax=Deformed wing virus RepID=Q8B3M2_9VIRU
          Length = 2893

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7    VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
            +  S EW ++  RL + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 2615 DVNSLEWTNLATRLSKXGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 2673

Query: 352  EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
            E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 2674 EMKRVM-WTMAQEILAPSHLYRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 2732

Query: 532  KPEKCRFQQTVCLI 573
             P    F Q V L+
Sbjct: 2733 LP-LSEFSQNVVLV 2745

[150][TOP]
>UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia
           vitripennis virus RepID=C1K2M4_9VIRU
          Length = 787

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
 Frame = +1

Query: 19  CPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195
           C KD  +P  KI + G  R+FE+ P+ + +  RQ    F    QT R      +G NP  
Sbjct: 435 CLKDARIPIYKIPEPGKTRVFEMSPVDFTISQRQYFLDFYVAYQTARMNAENTIGINPDG 494

Query: 196 REWGHILARLMRPGTNEAINCDYSAFDG-LLNAQVIECIANMIN-------KLYALSGES 351
            EW  +  RL     +  +  DYSA+   LL++ ++      +N       ++     E 
Sbjct: 495 PEWTELANRLQEFSPH-ILTADYSAYGPRLLHSVILRAKMAELNWYEQEEERVCMPEEER 553

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E     RY M+  L+     V   + + N G+PSG A TV+ NS  N I IR AY  LA 
Sbjct: 554 ERNFKIRYTMIEELINPLNIVKDCIVRFNTGMPSGNAGTVITNSECNSIYIRCAYLGLAR 613

Query: 532 K 534
           K
Sbjct: 614 K 614

[151][TOP]
>UniRef100_Q8BDE0 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q8BDE0_9VIRU
          Length = 1904

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/174 (27%), Positives = 79/174 (45%)
 Frame = +1

Query: 13   IECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPY 192
            ++  KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN Y
Sbjct: 1561 VDTLKDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVY 1620

Query: 193  SREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            S++W   + +L   G  + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R
Sbjct: 1621 SQDWNKTVRKLKTMGP-KVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IR 1676

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            + +LM +       G  V+ +    PSG   T  +N   N + +R  +   + K
Sbjct: 1677 HVLLMDVYNSTHVCGDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKK 1730

[152][TOP]
>UniRef100_Q7TG18 Polyprotein n=1 Tax=Deformed wing virus RepID=Q7TG18_9VIRU
          Length = 2893

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7    VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
            +  S EW ++  RL + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 2615 DVNSLEWTNLATRLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 2673

Query: 352  EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
            E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 2674 EMKRVM-WTMAQEILAPSHLYRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 2732

Query: 532  KPEKCRFQQTVCLI 573
             P    F Q V L+
Sbjct: 2733 LP-LSEFSQNVVLV 2745

[153][TOP]
>UniRef100_Q6XMI0 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=Q6XMI0_9VIRU
          Length = 1566

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7    VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 1240 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 1299

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
            +  S EW ++  RL + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 1300 DVNSLEWTNLATRLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 1358

Query: 352  EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
            E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 1359 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 1417

Query: 532  KPEKCRFQQTVCLI 573
             P    F Q V L+
Sbjct: 1418 LP-LSEFSQNVVLV 1430

[154][TOP]
>UniRef100_Q8B594 Nonstructural polyprotein n=1 Tax=Aphid lethal paralysis virus
            RepID=Q8B594_ALPV
          Length = 2035

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 24/187 (12%)
 Frame = +1

Query: 4    LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            ++ I+  KD  +P  K  VG  RLF   PLHY +  RQ    F      NR +    VG 
Sbjct: 1659 IIWIDTLKDAKIPIAKANVGKTRLFTACPLHYTILFRQYFLPFIAHAMRNRVQNSIAVGI 1718

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQ 363
            NP S EW  +  RL R G    I  DYS FDG L  Q +E +A  I   + +    ++  
Sbjct: 1719 NPMSPEWDLLAKRLKRNG-KHVIAGDYSNFDGTLPVQYVE-VAVKIMVDWFMRNWDQIVA 1776

Query: 364  AQRY-------------NMLMAL---------VGRYAFV--GQKVFKVNCGLPSGFALTV 471
            A R+               LM +         +  ++ +     ++ V  G+PSG   T 
Sbjct: 1777 ADRHVINGRELDYDEFEQFLMKIGVECINHLHIANHSDLTGAALIYYVRNGIPSGCPATA 1836

Query: 472  VVNSVFN 492
            ++NS+ N
Sbjct: 1837 ILNSIVN 1843

[155][TOP]
>UniRef100_Q7LZW0 Polyprotein n=1 Tax=Parsnip yellow fleck virus RepID=Q7LZW0_9SECO
          Length = 637

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKI-KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IECPKDE     KI +    RLF I+P+ +N+  R+    F  F+  NRH+    VG
Sbjct: 391 LICIECPKDERRALDKIYEKPKTRLFSILPVEFNMHARRLFLDFNVFVMANRHKHGIMVG 450

Query: 181 TNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQ 360
            NP+SREW   LA  +   +    N D++ FDG+ +                 SG     
Sbjct: 451 INPHSREWSD-LAISLASFSPYGFNGDFANFDGMFHPS---------------SG----- 489

Query: 361 QAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA 528
                                + +V  G PSGF +TV+ NS  N   ++ A+  LA
Sbjct: 490 --------------------AILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLA 525

[156][TOP]
>UniRef100_Q4QZ13 Putative polymerase (Fragment) n=1 Tax=Lettuce mottle virus
           RepID=Q4QZ13_9VIRU
          Length = 187

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 43/133 (32%), Positives = 67/133 (50%)
 Frame = +1

Query: 130 FTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECI 309
           F      NRH+    VG NP+SREW   LA  +   +    N D++ FDG+ +    E +
Sbjct: 6   FNVVTMANRHKHGIMVGINPHSREWTE-LALGLASFSPIGFNGDFANFDGMFHPDAFEMV 64

Query: 310 ANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVF 489
            ++ NK Y   G+S  +  +R  +  AL  R + +   V  +  G PSGF +TV+ NS  
Sbjct: 65  CDLANKFY---GDS--RGPERKCLTEALTNRLSLIKGSVLSIGGGGPSGFPMTVIFNSFI 119

Query: 490 NEILIRYAYRKLA 528
           N   ++ A+ +LA
Sbjct: 120 NLFYLQAAWIQLA 132

[157][TOP]
>UniRef100_Q9DSG1 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q9DSG1_9VIRU
          Length = 228

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 46/169 (27%), Positives = 77/169 (45%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIANEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLM 387
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R+ +L+
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLLV 116

Query: 388 ALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
            +          V+ +    PSG   T  +N   N + +R  +   A K
Sbjct: 117 DVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 165

[158][TOP]
>UniRef100_Q76LW4 Polyprotein n=1 Tax=Kakugo virus RepID=Q76LW4_9VIRU
          Length = 2893

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7    VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
            +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 2615 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 2673

Query: 352  EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
            E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 2674 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 2732

Query: 532  KPEKCRFQQTVCLI 573
             P    F Q V L+
Sbjct: 2733 LP-LSEFSQNVVLV 2745

[159][TOP]
>UniRef100_Q0EDK8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK8_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYXDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[160][TOP]
>UniRef100_Q0EDK3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK3_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[161][TOP]
>UniRef100_Q0EDJ8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ8_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[162][TOP]
>UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLXAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVXSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[163][TOP]
>UniRef100_Q0EDJ6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ6_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLXAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVXSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[164][TOP]
>UniRef100_Q0EDJ5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ5_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[165][TOP]
>UniRef100_Q0EDI6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI6_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGXTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[166][TOP]
>UniRef100_A0ZSF0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF0_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[167][TOP]
>UniRef100_A0ZSE7 Polyprotein (Fragment) n=13 Tax=Kakugo virus RepID=A0ZSE7_9VIRU
          Length = 297

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[168][TOP]
>UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU
          Length = 297

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLXAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[169][TOP]
>UniRef100_Q0EDI5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI5_9VIRU
          Length = 297

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGVTD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[170][TOP]
>UniRef100_Q7TFA5 Polyprotein n=1 Tax=Varroa destructor virus 1 RepID=Q7TFA5_9VIRU
          Length = 2893

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
 Frame = +1

Query: 7    VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
            +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2555 IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 2614

Query: 184  NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
            +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +   Y    + 
Sbjct: 2615 DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLN-YTEEDDK 2672

Query: 352  EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
            +  +   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A++ +  
Sbjct: 2673 DEMKRVMWTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWQGITD 2732

Query: 532  KP 537
             P
Sbjct: 2733 LP 2734

[171][TOP]
>UniRef100_Q0EDK9 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK9_9VIRU
          Length = 297

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+     
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGXTD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[172][TOP]
>UniRef100_Q0EDJ0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ0_9VIRU
          Length = 297

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTHX-VTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDXKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T + N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDIXNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[173][TOP]
>UniRef100_Q0EDK4 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK4_9VIRU
          Length = 297

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +          
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNXX 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAXEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[174][TOP]
>UniRef100_A0ZSF1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF1_9VIRU
          Length = 297

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFXISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDXKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAXXILAPSHXCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 LP-LSEFSQNVVLV 192

[175][TOP]
>UniRef100_Q0EDJ2 Polyprotein (Fragment) n=2 Tax=Kakugo virus RepID=Q0EDJ2_9VIRU
          Length = 297

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVXKCRIPGKTRIFSISPVQFTIPFRQYXLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYXEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V +V CG+PSG   T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVXRVPCGIPSGSPXTDILNTISNCLLIRLAWLGITD 179

Query: 532 KPEKCRFQQTVCLI 573
            P    F Q V L+
Sbjct: 180 XP-LSEFSQNVVLV 192

[176][TOP]
>UniRef100_C1K2M5 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia vitripennis
           virus RepID=C1K2M5_9VIRU
          Length = 386

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
 Frame = +1

Query: 43  ERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILAR 222
           E+ +K G  R+F + P+  ++ LRQ T   T +L+ +R      +G NP   EWG I+  
Sbjct: 1   EKLMKPGGTRVFSMSPVTASIVLRQYTLDLTSYLRKHRISNWIGIGINPDGPEWGKIVTL 60

Query: 223 LMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYA--LSGESEVQQAQRYNMLMALV 396
           L   G N   + D+S F   LN  V+    N++   Y   L+   E     R  ++  L+
Sbjct: 61  LRTKGDN-IFSIDFSNFGPGLNINVVYEFYNLMTSFYGKYLNLTEEDGNVMRC-LIQELM 118

Query: 397 GRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYR 519
                 G  +++   G PSG A+TV +NS  + + I   ++
Sbjct: 119 YSVHLAGGTLYRTKSGSPSGAAITVEINSFVHLMYINICWQ 159

[177][TOP]
>UniRef100_Q0EDK2 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK2_9VIRU
          Length = 297

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KP 537
            P
Sbjct: 180 LP 181

[178][TOP]
>UniRef100_Q0EDK1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK1_9VIRU
          Length = 297

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
 Frame = +1

Query: 7   VVIECPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGT 183
           +  +C KD  LP  K ++ G  R+F I P+ + +  RQ    F    +  R      +G 
Sbjct: 2   IFTDCLKDTCLPVEKCRIPGKTRIFSISPVQFTIPFRQYYLDFMASYRAARLNAEHGIGI 61

Query: 184 NPYSREWGHILARLMRPGTNEAINCDYSAF----DGLLNAQVIECIANMINKLYALSGES 351
           +  S EW ++   L + GT+  +  DY  F    D  + A   E I + +        + 
Sbjct: 62  DVNSLEWTNLATSLSKYGTH-IVTGDYKNFGPGLDSDVAASAFEIIIDWVLHYTEEDNKD 120

Query: 352 EVQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAP 531
           E+++   + M   ++         V++V CG+PSG  +T ++N++ N +LIR A+  +  
Sbjct: 121 EMKRVM-WTMAQEILAPSHLCRDLVYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITD 179

Query: 532 KP 537
            P
Sbjct: 180 LP 181

[179][TOP]
>UniRef100_Q6QLR4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Venturia canescens
           picorna-like virus RepID=Q6QLR4_9PICO
          Length = 514

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
 Frame = +1

Query: 19  CPKDELLPERKIKV-GACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYS 195
           C KD  +P RK+ V G+ R+FE+ P+   +  RQ    FT   +  R +    +G NP  
Sbjct: 188 CLKDARIPNRKVSVPGSTRVFEMSPVDLTIAQRQFFMDFTVAYRVARLQAENSIGINPDG 247

Query: 196 REWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRY 375
           +EW  ++  L        +  DYS +   L+  ++E   +  + ++ +  E   ++    
Sbjct: 248 KEWTQLVEYLTEFSPC-ILTADYSGYGPRLSHALLERSFDA-SIVWLMDNEVCEEEEMND 305

Query: 376 NMLMALVGRYAF------VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
             +  LV ++        V   VF+  CGLPSG   TV  NS  N + IR A+ +LA +
Sbjct: 306 RCVTRLVLKHEVTHGLHVVKDLVFRPTCGLPSGNCETVERNSQTNSLYIRIAFYELAKR 364

[180][TOP]
>UniRef100_Q2HWK3 Polyprotein n=1 Tax=Rhizosolenia setigera RNA virus
            RepID=Q2HWK3_9VIRU
          Length = 1605

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
 Frame = +1

Query: 19   CPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198
            C KDE     K KV   R F+  P+     +R+       FL +      C VG N   R
Sbjct: 1256 CTKDEPTKITKDKV---RCFQASPVSLQFNIRKYFLTLCHFLSSASLVSECAVGINSQGR 1312

Query: 199  EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378
             W  +   +++ G N  +  D+ A+D  ++A++    A +   +  L+G +E +      
Sbjct: 1313 GWHELNQHMIKYGKNRIVAGDFKAYDQHMSARMTLMAAKVFEYIAGLAGYTEEE------ 1366

Query: 379  MLMALVGRYAFVGQKVFKVNCGL-------PSGFALTVVVNSVFNEILIRYAYRKLAP 531
             L  + G    V   V  +N  L       PSG  LTV  NS+ N +  R A+RK+ P
Sbjct: 1367 -LKIMRGASTEVSYPVMSLNGELIQLYGSNPSGQNLTVYTNSIVNSLYHRCAFRKIYP 1423

[181][TOP]
>UniRef100_B4ZF24 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Arabis mosaic virus
           RepID=B4ZF24_ARMV
          Length = 113

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           L+ IE PKDE L   KI+    RLF ++PL YNL LR K  +F++ L   R  LPCQVG
Sbjct: 54  LISIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRSHLPCQVG 112

[182][TOP]
>UniRef100_P08545 RNA-directed RNA polymerase 3D-POL n=1 Tax=Theiler's
            encephalomyelitis virus (STRAIN GDVII) RepID=POLG_TMEVG
          Length = 2303

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNR-HRLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 2001 KDEIRPLEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGFELGSAIGTDP-DVD 2059

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W    A L   G N   + DYS FD   +  + EC   +IN  +      + + A+    
Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155

[183][TOP]
>UniRef100_UPI0000167EF0 protein 3D n=1 Tax=Theilovirus RepID=UPI0000167EF0
          Length = 461

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
           KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 159 KDEIRPLEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 217

Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
           W    A L   G N   + DYS FD   +  + EC   +IN  +      + + A+    
Sbjct: 218 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 272

Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
           L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 273 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 313

[184][TOP]
>UniRef100_Q88595 Theilers murine encephalomyelitis virus (TMEV) complete genome n=1
            Tax=Theiler's encephalomyelitis virus (STRAIN GDVII)
            RepID=Q88595_TMEVG
          Length = 2303

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 2001 KDEIRPLEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W    A L   G N   + DYS FD   +  + EC   +IN  +      + + A+    
Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155

[185][TOP]
>UniRef100_B4ZF26 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Grapevine fanleaf
           virus RepID=B4ZF26_GFLV
          Length = 115

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 31/59 (52%), Positives = 36/59 (61%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IE PKDE L   KI     RLF ++PL YNL LR K  +F++ L   R  LPCQVG
Sbjct: 55  LVCIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVG 113

[186][TOP]
>UniRef100_B4ZF25 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Grapevine fanleaf
           virus RepID=B4ZF25_GFLV
          Length = 115

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 31/59 (52%), Positives = 36/59 (61%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IE PKDE L   KI     RLF ++PL YNL LR K  +F++ L   R  LPCQVG
Sbjct: 55  LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQVG 113

[187][TOP]
>UniRef100_Q0ZKA1 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus
            RepID=Q0ZKA1_9PICO
          Length = 2303

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W      L   G N   + DYS FD   +  + EC   +IN  +      + + A+    
Sbjct: 2060 WTRYAVELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155

[188][TOP]
>UniRef100_O36184 Nonstructural polyprotein n=1 Tax=Plautia stali intestine virus
            RepID=O36184_9VIRU
          Length = 1811

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
 Frame = +1

Query: 28   DELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201
            D L  ERK   K    RLF   PL Y +  R         L   +      VGTNPYS +
Sbjct: 1467 DTLKDERKAIEKAHKTRLFSASPLPYLILCRMYLQGGVSRLIRGKIVNNIAVGTNPYSDD 1526

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVI----ECIANMINKLYALSGESEVQQAQ 369
            W  +   L+R      +  D++++D     +++    E I  +   L     E +  +  
Sbjct: 1527 WTRVAHHLLR--NRHFVAGDFASYDSSQEKEILRAACEVIVELCEDLSLPQSERDKHRRV 1584

Query: 370  RYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY 516
            R+ +L +L+    +   K++  +  LPSG  LT ++NS+F  I + YA+
Sbjct: 1585 RWVLLESLLNSVHYSYGKLYYWSKSLPSGHFLTSIINSIFVNIAMCYAF 1633

[189][TOP]
>UniRef100_B4YYR1 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus
            RepID=B4YYR1_9PICO
          Length = 2303

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI+    R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 2001 KDEIRPLEKIQEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W    A L   G N   + DYS FD   +  + EC   +I   +      + + A+    
Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDAWHSTAMFEC---LIKNFFTEQNGFDRRIAEYLRS 2114

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155

[190][TOP]
>UniRef100_P08544 RNA-directed RNA polymerase 3D-POL n=1 Tax=Theiler's
            encephalomyelitis virus (STRAIN BEAN 8386)
            RepID=POLG_TMEVB
          Length = 2303

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W      L   G N   + DYS FD   +  + EC   +IN  +      + + A+    
Sbjct: 2060 WTRYAVELS--GFNYVYDVDYSNFDASHSTAMFEC---LINNFFTEQNGFDRRIAEYLRS 2114

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155

[191][TOP]
>UniRef100_Q9YXM5 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q9YXM5_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[192][TOP]
>UniRef100_Q9QM80 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q9QM80_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIMNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[193][TOP]
>UniRef100_Q9QM13 RNA polymerase (Fragment) n=2 Tax=Dicistroviridae
           RepID=Q9QM13_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[194][TOP]
>UniRef100_Q9INH0 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q9INH0_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[195][TOP]
>UniRef100_Q9ING5 RNA polymerase (Fragment) n=2 Tax=Dicistroviridae
           RepID=Q9ING5_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[196][TOP]
>UniRef100_Q9ING4 RNA polymerase (Fragment) n=7 Tax=Kashmir bee virus
           RepID=Q9ING4_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[197][TOP]
>UniRef100_Q99HN7 RNA polymerase (Fragment) n=2 Tax=Kashmir bee virus
           RepID=Q99HN7_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIANEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[198][TOP]
>UniRef100_Q99HN5 RNA polymerase (Fragment) n=4 Tax=Viruses RepID=Q99HN5_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRIANEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[199][TOP]
>UniRef100_Q77X60 RNA polymerase (Fragment) n=9 Tax=Kashmir bee virus
           RepID=Q77X60_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[200][TOP]
>UniRef100_C3U5A3 Polyprotein (Fragment) n=1 Tax=Saffold virus RepID=C3U5A3_9PICO
          Length = 2322

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 2025 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2083

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W     +L++       + DYS FD   +  + E    +I   + L    + +    +  
Sbjct: 2084 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTLENGFDKRIGDYFRS 2138

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 2139 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2179

[201][TOP]
>UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU
          Length = 3085

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
 Frame = +1

Query: 25   KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201
            KDEL P  K++  G  R+F + PL   L  R+    F    Q+        +G NP S +
Sbjct: 2623 KDELRPSEKLRRFGGTRVFSVPPLELVLNSRRFLLPFMDAFQSFPIEAHHAIGLNPNSGD 2682

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYAL--SGESEVQQAQRY 375
            W  +   L+  G    +  DY  +   +  + +    ++I   Y        E++ A + 
Sbjct: 2683 WRRLRDTLLEKGPC-LLQMDYKNYSDAIPKECVAKAFHIIVDYYRKWHCSTVEIENALKT 2741

Query: 376  NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQ 555
              L          G  VFKVN G+ +G  +T VVNSV N IL+ Y + K+A +     F+
Sbjct: 2742 LFLDTADAELLVYGD-VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIARRRASEFFK 2800

Query: 556  QTVCLI 573
             T  ++
Sbjct: 2801 LTYIIV 2806

[202][TOP]
>UniRef100_B4YYP1 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus
            RepID=B4YYP1_9PICO
          Length = 2303

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTKPGLELGSAIGTDP-DVD 2059

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W    A L   G N   + DYS FD   +  + EC   +I+  +      + + A+    
Sbjct: 2060 WTRYAAELS--GFNYVYDVDYSNFDASHSTAMFEC---LIDNFFTEQNGFDRRIAEYLRS 2114

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155

[203][TOP]
>UniRef100_B3GTT2 RNA polymerase (Fragment) n=9 Tax=Dicistroviridae
           RepID=B3GTT2_9VIRU
          Length = 138

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[204][TOP]
>UniRef100_Q9E7S9 RNA polymerase (Fragment) n=8 Tax=Dicistroviridae
           RepID=Q9E7S9_9VIRU
          Length = 138

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 33/102 (32%), Positives = 52/102 (50%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVDQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFY 101

[205][TOP]
>UniRef100_B4YYP2 Polyprotein n=1 Tax=Theiler's encephalomyelitis virus
            RepID=B4YYP2_9PICO
          Length = 2303

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P + +
Sbjct: 2001 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASRFQTTPGLELGSAIGTDP-NVD 2059

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W    A L     N   + DYS FD   +  + EC   +I   +      + + A+    
Sbjct: 2060 WTRYAAELSN--FNYVYDVDYSNFDASHSTAMFEC---LIKNFFTEQNGFDKRNAEYLRS 2114

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 2115 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 2155

[206][TOP]
>UniRef100_B4ZF29 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tobacco ringspot
           virus RepID=B4ZF29_TRSV
          Length = 114

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 30/59 (50%), Positives = 35/59 (59%)
 Frame = +1

Query: 4   LVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVG 180
           LV IE PKDE L   KI     RLF ++PL YNL LR K  +F++ L   R  LPCQ G
Sbjct: 55  LVSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRGHLPCQGG 113

[207][TOP]
>UniRef100_A1XLS5 Polyprotein (Fragment) n=4 Tax=Acute bee paralysis virus
           RepID=A1XLS5_9VIRU
          Length = 139

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 39/135 (28%), Positives = 63/135 (46%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
           KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W
Sbjct: 4   KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63

Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
            H   R ++    + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R+ +L
Sbjct: 64  -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGSENAL---IRHVLL 119

Query: 385 MALVGRYAFVGQKVF 429
           M +       G  V+
Sbjct: 120 MDVYNSTHICGDSVY 134

[208][TOP]
>UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU
          Length = 3085

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 3/186 (1%)
 Frame = +1

Query: 25   KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201
            KDEL P  K++  G  R+F + PL   L  R+    F    Q+        +G NP S +
Sbjct: 2623 KDELRPSEKLRRFGGTRVFSVPPLELVLNSRRFLLPFMDAFQSFPIEAHHAIGLNPNSGD 2682

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYAL--SGESEVQQAQRY 375
            W  +   L+  G    +  DY  +   +  + +    ++I   Y        E++ A + 
Sbjct: 2683 WRRLRDTLLEKGPC-LLQMDYKNYSDAIPKECVAKAFHIIVDYYRKWHCSTVEIENALKT 2741

Query: 376  NMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQ 555
              L          G  VFKVN G+ +G  +T VVNSV N IL+ Y + K+  +     F+
Sbjct: 2742 LFLDTADAELLVYGD-VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKITRRRASEFFK 2800

Query: 556  QTVCLI 573
             T  ++
Sbjct: 2801 LTYIIV 2806

[209][TOP]
>UniRef100_UPI000165DAC1 3D n=1 Tax=Bovine rhinovirus 2 RepID=UPI000165DAC1
          Length = 467

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQVGTNPYSRE 201
           KDE+ P  K++ G  R+ +++PL + +F R+    F   +  N    +   VG +P    
Sbjct: 163 KDEIRPSEKVRAGKTRIVDVLPLEHIIFSRKYLGRFCAAMHRNYGPNIGSAVGCDP-DVA 221

Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
           W        +     AI  DY+AFD   + Q++  +A+ +      S      +  RY +
Sbjct: 222 WQEFGTHFSQYRNVWAI--DYTAFDSCHSTQLMSVMADEV-----FSDAYGFDERARYAV 274

Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
                  +A+  +++  ++ GLPSG + T ++N+V N I + +A ++  P  E
Sbjct: 275 KSLCKTVHAYEDKRI-TIDGGLPSGCSATSILNTVLNNIYVMFALKRTYPNTE 326

[210][TOP]
>UniRef100_C3U5A7 Polyprotein (Fragment) n=1 Tax=Saffold virus RepID=C3U5A7_9PICO
          Length = 2228

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 2025 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2083

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W     +L++       + DYS FD   +  + E    +I   + +    + +       
Sbjct: 2084 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTVENGFDERTGDYLRS 2138

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 2139 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2179

[211][TOP]
>UniRef100_B0Z3W9 BRV2 polyprotein n=1 Tax=Bovine rhinovirus 2 RepID=B0Z3W9_9PICO
          Length = 2280

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQVGTNPYSRE 201
            KDE+ P  K++ G  R+ +++PL + +F R+    F   +  N    +   VG +P    
Sbjct: 1976 KDEIRPSEKVRAGKTRIVDVLPLEHIIFSRKYLGRFCAAMHRNYGPNIGSAVGCDP-DVA 2034

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W        +     AI  DY+AFD   + Q++  +A+ +      S      +  RY +
Sbjct: 2035 WQEFGTHFSQYRNVWAI--DYTAFDSCHSTQLMSVMADEV-----FSDAYGFDERARYAV 2087

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
                   +A+  +++  ++ GLPSG + T ++N+V N I + +A ++  P  E
Sbjct: 2088 KSLCKTVHAYEDKRI-TIDGGLPSGCSATSILNTVLNNIYVMFALKRTYPNTE 2139

[212][TOP]
>UniRef100_A9JPF2 Polyprotein n=1 Tax=Saffold virus RepID=A9JPF2_9PICO
          Length = 2293

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 1991 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2049

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W     +L++       + DYS FD   +  +IE +          + E+   +     +
Sbjct: 2050 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMIEILIENF-----FTTENGFDEGIGDYL 2102

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
                V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 2103 RSLAVSRHAFEERRVL-VKGGLPSGCAATSMLNTIINNIVIRAA 2145

[213][TOP]
>UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious
           flacherie virus RepID=A3RKR2_9VIRU
          Length = 639

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
 Frame = +1

Query: 25  KDELLPERKIK-VGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSRE 201
           KDEL P  K++  G  R+F + PL   L  R+    F    Q+        +G NP S +
Sbjct: 177 KDELRPSEKLRRFGGTRVFSVPPLELVLNSRRFLLPFMDAFQSFPIEAHHAIGLNPNSGD 236

Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
           W  +   L+  G    +  DY  +   +     EC+A   + +     +      +  N 
Sbjct: 237 WRRLRDTLLEKGPC-LLQMDYKNYSDAIPK---ECVAKAFHIIVDYYRKWHCTTVEIENA 292

Query: 382 LMALVGRYA----FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR 549
           L  L    A     V   VFKVN G+ +G  +T VVNSV N IL+ Y + K+  +     
Sbjct: 293 LKTLFLDTADAELLVYGDVFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKITRRRASEF 352

Query: 550 FQQTVCLI 573
           F+ T  ++
Sbjct: 353 FKLTYIIV 360

[214][TOP]
>UniRef100_A1XLT7 Polyprotein (Fragment) n=1 Tax=Acute bee paralysis virus
           RepID=A1XLT7_9VIRU
          Length = 139

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 39/135 (28%), Positives = 63/135 (46%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
           KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W
Sbjct: 4   KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63

Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
            H   R ++    + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R+ +L
Sbjct: 64  -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119

Query: 385 MALVGRYAFVGQKVF 429
           M +       G  V+
Sbjct: 120 MDVYNSTHICGDSVY 134

[215][TOP]
>UniRef100_A1XLT6 Polyprotein (Fragment) n=1 Tax=Acute bee paralysis virus
           RepID=A1XLT6_9VIRU
          Length = 139

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 39/135 (28%), Positives = 63/135 (46%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
           KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W
Sbjct: 4   KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63

Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
            H   R ++    + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R+ +L
Sbjct: 64  -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119

Query: 385 MALVGRYAFVGQKVF 429
           M +       G  V+
Sbjct: 120 MNVYNSTHICGDSVY 134

[216][TOP]
>UniRef100_A1XLS0 Polyprotein (Fragment) n=16 Tax=Acute bee paralysis virus
           RepID=A1XLS0_9VIRU
          Length = 139

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 39/135 (28%), Positives = 63/135 (46%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
           KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W
Sbjct: 4   KDERRPIEKVDQLKTRVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63

Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
            H   R ++    + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R+ +L
Sbjct: 64  -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119

Query: 385 MALVGRYAFVGQKVF 429
           M +       G  V+
Sbjct: 120 MDVYNSTHICGDSVY 134

[217][TOP]
>UniRef100_B4YYR0 Polyprotein (Fragment) n=1 Tax=Vilyuisk human encephalomyelitis virus
            RepID=B4YYR0_9PICO
          Length = 1381

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P  + ++ RQ    F    QT     L   +GT+P   +
Sbjct: 1079 KDEIRPIEKIHEAKTRIVDVPPFAHCIWGRQLLGRFASKFQTRPGLELGSAIGTDP-DVD 1137

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W    A L     N   + DYS FD   +  + EC   +I   +      + + A+    
Sbjct: 1138 WTRYAAELSN--FNYVYDVDYSNFDASHSTAMFEC---LIKNFFTEQNGFDKRIAEYLRS 1192

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+A+  ++V  +  GLPSG A T ++N++ N ++IR A
Sbjct: 1193 L--AVSRHAYEDRRVL-IRGGLPSGCAATSMLNTIMNNVIIRAA 1233

[218][TOP]
>UniRef100_A7KCA0 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-A
            RepID=A7KCA0_9VIRU
          Length = 1689

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 45/175 (25%), Positives = 70/175 (40%), Gaps = 1/175 (0%)
 Frame = +1

Query: 19   CPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198
            C KDE     K KV   R+FE     + L +R+      + L        C VG N    
Sbjct: 1351 CVKDEATKIGKEKV---RVFEAADWAFQLIVRKYFLPIARMLSLFPLTSECAVGVNAQGP 1407

Query: 199  EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378
            EW  +   + + G +     DYS +D  + AQ+I      +  +    G+  V   +   
Sbjct: 1408 EWDQLARHMKKFGADRIFAGDYSKYDLRMPAQLILAAFKCLIDIAKTCGQYSVDDIKIMQ 1467

Query: 379  MLMALVGRYAFVGQKVFKVNCGL-PSGFALTVVVNSVFNEILIRYAYRKLAPKPE 540
             +   +            ++CG  PSG  LTV +N + N +L+R AY  + P  E
Sbjct: 1468 GVATEIAYSCVSYNGDLIIHCGSNPSGQNLTVYINCIVNSLLLRCAYYHMYPAAE 1522

[219][TOP]
>UniRef100_Q7T7T5 Polyprotein n=1 Tax=Heterosigma akashiwo RNA virus SOG263
            RepID=Q7T7T5_HARNA
          Length = 2581

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
            KDE L   K+     R F    ++  + +R+  C   Q L+ N       +GTN + ++W
Sbjct: 1364 KDEALRIGKVP----RTFYAASMNVIMAVRKYFCPVLQALKANPIHAEIAIGTNAFGKDW 1419

Query: 205  GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSG-ESEVQQAQRYNM 381
              I + L    T   I  DYS+FD   NA  + C   ++  L   S   S+V +     +
Sbjct: 1420 ADIYSHLASHSTETVIAGDYSSFDMSHNADAVRCAMQVLLDLIDESSLYSDVDKLAARTL 1479

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP 537
            + +L   +        +V   + SG  LT  ++S  N+I +R  ++ +  +P
Sbjct: 1480 VESLGQSFLAFDGTWMQVIGWVMSGVPLTAELSSTLNQIYMRVVWKVVTQRP 1531

[220][TOP]
>UniRef100_Q5S2C9 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q5S2C9_9VIRU
          Length = 138

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 32/102 (31%), Positives = 50/102 (49%)
 Frame = +1

Query: 28  DELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWG 207
           DE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W 
Sbjct: 1   DERRPIEKVNQLKTRVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWS 60

Query: 208 HILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLY 333
             + +L + G N+ I  D+S FDG  N  ++E  A++ N  Y
Sbjct: 61  KTVRKLTKFG-NKVIAGDFSTFDGSXNVCIMEKFADLANDFY 101

[221][TOP]
>UniRef100_C3U5A5 Polyprotein (Fragment) n=1 Tax=Saffold virus RepID=C3U5A5_9PICO
          Length = 2318

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 2025 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASKFQTNPGLDLGSAIGTDP-DTD 2083

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W     +L++       + DYS FD   +  + E    +I   + +    + +       
Sbjct: 2084 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTVENGFDERIGDYLRS 2138

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 2139 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2179

[222][TOP]
>UniRef100_B9A8E0 Non-structural polyprotein n=1 Tax=Chaetoceros socialis f. radians
            RNA virus RepID=B9A8E0_9VIRU
          Length = 1690

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 48/185 (25%), Positives = 79/185 (42%)
 Frame = +1

Query: 19   CPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSR 198
            C KDE     K K    R+F+  P+     LR+       FL ++     C VG N    
Sbjct: 1336 CTKDEPTKMSKTKT---RVFQAAPVSLQYNLRRSCLPVWAFLSSSPIYSECAVGVNSQGC 1392

Query: 199  EWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYN 378
             W  +   L   GTN  +  D+ A+D  ++A+++     ++ ++  L+G S+ +      
Sbjct: 1393 AWNELDRFLTSFGTNRIVAGDFKAYDQHMSARMVLISYYIVEQIAKLAGYSDEECKLIRG 1452

Query: 379  MLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQ 558
            M   +      +  ++ K+    PSG   TV  NS+ N I  R  +  L P+ E   FQ 
Sbjct: 1453 MATDVAYPMMSLNGELIKLFGSNPSGQNGTVYTNSIVNSIYQRCVFFTLYPEYEG-NFQD 1511

Query: 559  TVCLI 573
             V L+
Sbjct: 1512 VVHLL 1516

[223][TOP]
>UniRef100_A9LNM7 Polyprotein n=1 Tax=Hepatitis A virus RepID=A9LNM7_9PICO
          Length = 2225

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1895 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1954

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L A       
Sbjct: 1955 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSATPSHFGT 2012

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                   ++  ++     +    + V   +PSG   T ++NS+ N I + Y + K+  K
Sbjct: 2013 A------LINTIIYSKHLLYNCCYHVYGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2065

[224][TOP]
>UniRef100_A1XLS2 Polyprotein (Fragment) n=1 Tax=Acute bee paralysis virus
           RepID=A1XLS2_9VIRU
          Length = 139

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 39/135 (28%), Positives = 63/135 (46%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREW 204
           KDE  P  K+     R+F   P+ +++  R     F   L  NR      +GTN YS++W
Sbjct: 4   KDERRPIEKVDQLKTRVFFNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDW 63

Query: 205 GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNML 384
            H   R ++    + I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R+ +L
Sbjct: 64  -HKTVRKLKTMGPKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENAL---IRHVLL 119

Query: 385 MALVGRYAFVGQKVF 429
           M +       G  V+
Sbjct: 120 MDVYNSTHICGDSVY 134

[225][TOP]
>UniRef100_UPI000175DA94 protein 3D n=1 Tax=Human TMEV-like cardiovirus RepID=UPI000175DA94
          Length = 461

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
           KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 159 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 217

Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
           W     +L++       + DYS FD   +  + E    +I   +      + +       
Sbjct: 218 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTTENGFDERIGDYLRS 272

Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
           L   V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 273 L--AVSRHAFEERRVL-VKGGLPSGCAATSMLNTIINNIVIRAA 313

[226][TOP]
>UniRef100_UPI000172CDE8 protein 3D n=1 Tax=Saffold virus RepID=UPI000172CDE8
          Length = 461

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25  KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
           KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 159 KDEIRPVEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 217

Query: 202 WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
           W     +L++       + DYS FD   +  + E +          + E+   +     +
Sbjct: 218 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEILIENF-----FTPENGFDERIGDYL 270

Query: 382 LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
               V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 271 RSLAVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 313

[227][TOP]
>UniRef100_Q8JR20 Polypeptide n=1 Tax=Foot-and-mouth disease virus - type O
            RepID=Q8JR20_9PICO
          Length = 2332

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201
            KDE+ P  K++ G  R+ +++P+ + L+ R     F  Q    N  R+   VG NP   +
Sbjct: 2026 KDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPRIGSAVGCNP-DVD 2084

Query: 202  WGHILARLMRPGTNEAI-----NCDYSAFDGLLNAQVIEC-IANMINKLYALSGESEVQQ 363
            W        R GT+ A      + DYSAFD    +  +   +  + N  +     +E   
Sbjct: 2085 W-------QRYGTHFAQYRNVWDVDYSAFDANHCSDAMNIMLEEVFNTEFGFHPNAEW-- 2135

Query: 364  AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
                 +L  LV        K   V  G+PSG + T ++N++ N I + YA R+
Sbjct: 2136 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2183

[228][TOP]
>UniRef100_Q5PXZ5 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q5PXZ5_9VIRU
          Length = 130

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = +1

Query: 70  RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249
           R+F   P+ +++  R     F   L  NR      +GTN YS++W   + +L + G N+ 
Sbjct: 6   RVFSXGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWNKTVRKLTKFG-NKV 64

Query: 250 INCDYSAFDGLLNAQVIECIANMINKLY 333
           I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 65  IAGDFSTFDGSLNVCIMEKFADLANEFY 92

[229][TOP]
>UniRef100_C0MHL9 Polyprotein n=1 Tax=Saffold virus RepID=C0MHL9_9PICO
          Length = 2295

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 1993 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2051

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W     +L++       + DYS FD   +  + E    +I   +      + +       
Sbjct: 2052 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEV---LIENFFTTENGFDERIGDYLRS 2106

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 2107 L--AVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2147

[230][TOP]
>UniRef100_B4ZF27 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Potato black
           ringspot virus RepID=B4ZF27_9SECO
          Length = 117

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 32/62 (51%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKI--KVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQ 174
           E+V IECPKDELL  RK+  K+G  R FEI+ L  N+  R+K  ++  FL   R  LPCQ
Sbjct: 56  EMVCIECPKDELLVPRKVLEKLGT-RNFEILELPKNMLFRKKFLSWASFLSEMRWCLPCQ 114

Query: 175 VG 180
           VG
Sbjct: 115 VG 116

[231][TOP]
>UniRef100_B3FRR2 Polyprotein n=1 Tax=Human TMEV-like cardiovirus RepID=B3FRR2_9PICO
          Length = 2293

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 1991 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2049

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W     +L++       + DYS FD   +  + E    +I   +      + +       
Sbjct: 2050 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEI---LIENFFTTENGFDERIGDYLRS 2104

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
            L   V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 2105 L--AVSRHAFEERRVL-VKGGLPSGCAATSMLNTIINNIVIRAA 2145

[232][TOP]
>UniRef100_A4ZKN2 Viral polyprotein n=1 Tax=Saffold virus RepID=A4ZKN2_9PICO
          Length = 2296

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 1994 KDEIRPVEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DTD 2052

Query: 202  WGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNM 381
            W     +L++       + DYS FD   +  + E +          + E+   +     +
Sbjct: 2053 WTAFAFQLLQ--YKYVYDVDYSNFDASHSTAMFEILIENF-----FTPENGFDERIGDYL 2105

Query: 382  LMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
                V R+AF  ++V  V  GLPSG A T ++N++ N I+IR A
Sbjct: 2106 RSLAVSRHAFEERRVL-VRGGLPSGCAATSMLNTIINNIVIRAA 2148

[233][TOP]
>UniRef100_A6XP83 Polyprotein n=1 Tax=Foot-and-mouth disease virus - type Asia 1
            RepID=A6XP83_9PICO
          Length = 2329

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201
            KDE+LP  K++ G  R+ +++P+ + L+ R     F  Q    N  ++   VG NP   +
Sbjct: 2023 KDEILPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVD 2081

Query: 202  WGHILARLMRPGTNEA-----INCDYSAFDGLLNAQVIECI-ANMINKLYALSGESEVQQ 363
            W        R GT+ A      + DYSAFD    +  +  +   + N  +     +E   
Sbjct: 2082 W-------QRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFNTDFGFHPNAEW-- 2132

Query: 364  AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
                 +L  LV        K   V  G+PSG + T ++N++ N I + YA R+
Sbjct: 2133 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2180

[234][TOP]
>UniRef100_Q9QAG7 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q9QAG7_9VIRU
          Length = 182

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/120 (29%), Positives = 59/120 (49%)
 Frame = +1

Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESE 354
           +GTN YS++W   + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    E+ 
Sbjct: 3   IGTNVYSQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENA 61

Query: 355 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
           +    R+ +LM +          V+ +    PSG   T  +N   N + +R  +   A K
Sbjct: 62  L---IRHVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 118

[235][TOP]
>UniRef100_Q995Q1 RNA polymerase (Fragment) n=3 Tax=Kashmir bee virus
           RepID=Q995Q1_9VIRU
          Length = 182

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/120 (29%), Positives = 59/120 (49%)
 Frame = +1

Query: 175 VGTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESE 354
           +GTN YS++W   + +L + G N+ I  D+S FDG LN  ++E  A++ N+ Y    E+ 
Sbjct: 4   IGTNVYSQDWSKTVRKLTKFG-NKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGPENA 62

Query: 355 VQQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
           +    R+ +LM +          V+ +    PSG   T  +N   N + +R  +   A K
Sbjct: 63  L---IRHVLLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFSICATK 119

[236][TOP]
>UniRef100_Q8BDF5 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=Q8BDF5_9VIRU
          Length = 128

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/127 (27%), Positives = 61/127 (48%)
 Frame = +1

Query: 70  RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249
           R+F   P+ +++  R     F   L  NR      +GTN YS++W   + +L + G ++ 
Sbjct: 5   RVFSNGPMDFSITFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWSKTVRKLKQMG-SKV 63

Query: 250 INCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQRYNMLMALVGRYAFVGQKVF 429
           I  D+S FDG LN  ++E  A++ N+ Y    E+ +    R+ +LM +       G  V+
Sbjct: 64  IAGDFSTFDGSLNVCIMEKFADLANEFYNDGPENAL---IRHVLLMDVYNSVHICGDSVY 120

Query: 430 KVNCGLP 450
            +    P
Sbjct: 121 MMTHSQP 127

[237][TOP]
>UniRef100_Q1KL66 Polyprotein n=1 Tax=Foot-and-mouth disease virus - type O
            RepID=Q1KL66_9PICO
          Length = 2332

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201
            KDE+ P  K++ G  R+ +++P+ + L+ R     F  Q    N  R+   VG NP   +
Sbjct: 2026 KDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPRIGSAVGCNP-DVD 2084

Query: 202  WGHILARLMRPGTNEAI-----NCDYSAFDGLLNAQVIECI-ANMINKLYALSGESEVQQ 363
            W        R GT+ A      + DYSAFD    +  +  +   + N  +     +E   
Sbjct: 2085 W-------QRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFNTEFGFHPNAEW-- 2135

Query: 364  AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
                 +L  LV        K   V  G+PSG + T ++N++ N I + YA R+
Sbjct: 2136 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2183

[238][TOP]
>UniRef100_A5HTW1 RNA polymerase (Fragment) n=1 Tax=Kashmir bee virus
           RepID=A5HTW1_9VIRU
          Length = 124

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = +1

Query: 70  RLFEIMPLHYNLFLRQKTCAFTQFLQTNRHRLPCQVGTNPYSREWGHILARLMRPGTNEA 249
           R+F   P+ +++  R     F   L  NR      +GTN YS++W   + +L + G N+ 
Sbjct: 8   RVFSNGPMDFSIAFRMYYLGFIAHLMENRITNEVSIGTNVYSQDWSKTVRKLTKFG-NKV 66

Query: 250 INCDYSAFDGLLNAQVIECIANMINKLY 333
           I  D+S FDG LN  ++E  A++ N+ Y
Sbjct: 67  IAGDFSTFDGSLNVCIMEKFADLANEFY 94

[239][TOP]
>UniRef100_B5SXL8 Polyprotein n=1 Tax=Rat theilovirus 1 RepID=B5SXL8_9PICO
          Length = 2307

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 2005 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DVD 2063

Query: 202  W---GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            W    H LA           + DYS FD   +  + E    +I + +      + +  + 
Sbjct: 2064 WTVFAHQLAEF-----KYVYDVDYSNFDASHSTAIFEI---LIQEFFTPQNGFDPRIGEY 2115

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
               L   V R+A+  ++V  +  GLPSG A T ++N++ N I+IR A
Sbjct: 2116 LRSL--AVSRHAYEDRRVL-IRGGLPSGCAATSMINTIINNIVIRAA 2159

[240][TOP]
>UniRef100_B3VTU7 Polyprotein n=1 Tax=Rat theilovirus 1 RepID=B3VTU7_9PICO
          Length = 2307

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 2005 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DVD 2063

Query: 202  W---GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            W    H LA           + DYS FD   +  + E    +I + +      + +  + 
Sbjct: 2064 WTVFAHQLAEF-----KYVYDVDYSNFDASHSTAIFEI---LIQEFFTPQNGFDPRIGEY 2115

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
               L   V R+A+  ++V  +  GLPSG A T ++N++ N I+IR A
Sbjct: 2116 LRSL--AVSRHAYEDRRVL-IRGGLPSGCAATSMINTIINNIVIRAA 2159

[241][TOP]
>UniRef100_Q67825 RNA-directed RNA polymerase 3D-POL n=1 Tax=Human hepatitis A virus
            Hu/Germany/GBM/1976 RepID=POLG_HAVGB
          Length = 2227

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L         
Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                   ++  ++     +    + V   +PSG   T ++NS+ N I + Y + K+  K
Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVYGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067

[242][TOP]
>UniRef100_UPI0000163E76 3D mature peptide n=1 Tax=Hepatitis A virus RepID=UPI0000163E76
          Length = 489

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1   ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
           ++V   CPKDEL P  K+     R  +  PL Y++  R        +   N        +
Sbjct: 159 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYSILCRMYWGPAISYFHLNPGFHTGVAI 218

Query: 178 GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
           G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L         
Sbjct: 219 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 276

Query: 358 QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                  ++  ++     +    + V   +PSG   T ++NS+ N + + Y + K+  K
Sbjct: 277 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNVNLYYVFSKIFGK 329

[243][TOP]
>UniRef100_Q9WMA3 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WMA3_9PICO
          Length = 2227

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L         
Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                   ++  ++     +    + V   +PSG   T ++NS+ N I + Y + K+  K
Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067

[244][TOP]
>UniRef100_Q9WMA1 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WMA1_9PICO
          Length = 2227

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L         
Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGGIMSELSGTPSHFGT 2014

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                   ++  ++     +    + V   +PSG   T ++NS+ N I + Y + K+  K
Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067

[245][TOP]
>UniRef100_Q9WMA0 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WMA0_9PICO
          Length = 2227

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L         
Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGGIMSELSGTPSHFGT 2014

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                   ++  ++     +    + V   +PSG   T ++NS+ N I + Y + K+  K
Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067

[246][TOP]
>UniRef100_Q9WM99 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q9WM99_9PICO
          Length = 2227

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L         
Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                   ++  ++     +    + V   +PSG   T ++NS+ N I + Y + K+  K
Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067

[247][TOP]
>UniRef100_Q8QV03 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q8QV03_9PICO
          Length = 2227

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 7/185 (3%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKIRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++   LSG    
Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSE---LSGTPS- 2010

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNC------GLPSGFALTVVVNSVFNEILIRYAYR 519
                  +   AL+     +  K    NC       +PSG   T ++NS+ N I + Y + 
Sbjct: 2011 ------HFGTALIN--TIIYSKHLPYNCCYHVCGSMPSGSPCTALLNSIVNNINLYYVFS 2062

Query: 520  KLAPK 534
            K+  K
Sbjct: 2063 KIFGK 2067

[248][TOP]
>UniRef100_Q80IV2 Polyprotein n=1 Tax=Theiler's-like virus of rats RepID=Q80IV2_9PICO
          Length = 2307

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTNRH-RLPCQVGTNPYSRE 201
            KDE+ P  KI     R+ ++ P H+ ++ RQ    F    QTN    L   +GT+P   +
Sbjct: 2005 KDEIRPIEKIHEAKTRIVDVPPFHHCIWGRQLLGRFASRFQTNPGLDLGSAIGTDP-DVD 2063

Query: 202  W---GHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEVQQAQR 372
            W    H LA           + DYS FD   +  + E    +I + +      + +  + 
Sbjct: 2064 WTVFAHQLAEF-----KYIYDVDYSNFDASHSTAIFEI---LIQEFFTPQNGFDPRIGEY 2115

Query: 373  YNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYA 513
               L   V R+A+  ++V  +  GLPSG A T ++N++ N I+IR A
Sbjct: 2116 LRSL--AVSRHAYEDRRVL-IRGGLPSGCAATSMINTIINNIVIRAA 2159

[249][TOP]
>UniRef100_Q7TD06 Polyprotein n=1 Tax=Foot-and-mouth disease virus - type O
            RepID=Q7TD06_9PICO
          Length = 2332

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
 Frame = +1

Query: 25   KDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAF-TQFLQTNRHRLPCQVGTNPYSRE 201
            KDE+ P  K++ G  R+ +++P+ + L+ R     F  Q    N  ++   VG NP   +
Sbjct: 2026 KDEIRPMEKVRAGKTRIVDVLPVEHTLYTRMMIGRFCAQMHSNNGPQIGSAVGCNP-DVD 2084

Query: 202  WGHILARLMRPGTNEA-----INCDYSAFDGLLNAQVIECI-ANMINKLYALSGESEVQQ 363
            W        R GT+ A      + DYSAFD    +  +  +   + N  +     +E   
Sbjct: 2085 W-------QRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFNTDFGFHPNAEW-- 2135

Query: 364  AQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK 522
                 +L  LV        K   V  G+PSG + T ++N++ N I + YA R+
Sbjct: 2136 -----ILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRR 2183

[250][TOP]
>UniRef100_Q71FG9 Polyprotein n=1 Tax=Hepatitis A virus RepID=Q71FG9_9PICO
          Length = 2227

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 1/179 (0%)
 Frame = +1

Query: 1    ELVVIECPKDELLPERKIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQTN-RHRLPCQV 177
            ++V   CPKDEL P  K+     R  +  PL Y +  R        +   N        +
Sbjct: 1897 DVVFTTCPKDELRPLEKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGFHTGVAI 1956

Query: 178  GTNPYSREWGHILARLMRPGTNEAINCDYSAFDGLLNAQVIECIANMINKLYALSGESEV 357
            G +P  R+W  +   ++R G +  ++ D+SAFD  L+  +I     ++++L         
Sbjct: 1957 GIDP-DRQWDELFKTMIRFG-DVGLDLDFSAFDASLSPFMIREAGRIMSELSGTPSHFGT 2014

Query: 358  QQAQRYNMLMALVGRYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK 534
                   ++  ++     +    + V   +PSG   T ++NS+ N I + Y + K+  K
Sbjct: 2015 A------LINTIIYSKHLLYNCCYHVCGSMPSGSPCTALLNSIINNINLYYVFSKIFGK 2067