BB909788 ( RCE08657 )

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[1][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  318 bits (816), Expect = 1e-85
 Identities = 153/191 (80%), Positives = 167/191 (87%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           SVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF GEAIR+TLAE
Sbjct: 353 SVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRITLAE 412

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
           KKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP K 
Sbjct: 413 KKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPDKS 472

Query: 362 KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
           KFH  QK S + GEVDVIEEL+LNVNVALMELYLHND  EFQRVR F+  RLPL+V Q R
Sbjct: 473 KFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHNDVAEFQRVRGFYAQRLPLMVSQLR 532

Query: 542 TWAFCESFHSS 574
           TWAFCE+FHS+
Sbjct: 533 TWAFCEAFHSA 543

[2][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
           RepID=UPI0000163E03
          Length = 824

 Score =  318 bits (816), Expect = 1e-85
 Identities = 150/191 (78%), Positives = 167/191 (87%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           SVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDDNLISV+PS ASWF GEAIR+TLAE
Sbjct: 353 SVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDDNLISVSPSIASWFTGEAIRITLAE 412

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
           KKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP K 
Sbjct: 413 KKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPDKS 472

Query: 362 KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
           KFH  Q+AS + G VDV+EEL+LNVNVALMELYLHND +EF RVR F++  LPL   QFR
Sbjct: 473 KFHASQRASDFQGTVDVVEELILNVNVALMELYLHNDPREFSRVRDFYIKALPLATGQFR 532

Query: 542 TWAFCESFHSS 574
           TWAFCE+FHS+
Sbjct: 533 TWAFCEAFHSA 543

[3][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  318 bits (816), Expect = 1e-85
 Identities = 153/191 (80%), Positives = 167/191 (87%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            SVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF GEAIR+TLAE
Sbjct: 1795 SVFNEILIRYAYKKLAPAPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRITLAE 1854

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
            KKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP K 
Sbjct: 1855 KKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPDKS 1914

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
            KFH  QK S + GEVDVIEEL+LNVNVALMELYLHND  EFQRVR F+  RLPL+V Q R
Sbjct: 1915 KFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHNDVAEFQRVRGFYAQRLPLMVSQLR 1974

Query: 542  TWAFCESFHSS 574
            TWAFCE+FHS+
Sbjct: 1975 TWAFCEAFHSA 1985

[4][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  318 bits (816), Expect = 1e-85
 Identities = 150/191 (78%), Positives = 167/191 (87%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            SVFNEILIRYAY+KLAPKPE+ RF Q VCL+VYGDDNLISV+PS ASWF GEAIR+TLAE
Sbjct: 1793 SVFNEILIRYAYKKLAPKPERNRFNQVVCLLVYGDDNLISVSPSIASWFTGEAIRITLAE 1852

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
            KKVKITDGSDKDAPTIE K FWELDFLKRKFLKLD G++QAPLD +AIFSSLYWLTP K 
Sbjct: 1853 KKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRSAIFSSLYWLTPDKS 1912

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
            KFH  Q+AS + G VDV+EEL+LNVNVALMELYLHND +EF RVR F++  LPL   QFR
Sbjct: 1913 KFHASQRASDFQGTVDVVEELILNVNVALMELYLHNDPREFSRVRDFYIKALPLATGQFR 1972

Query: 542  TWAFCESFHSS 574
            TWAFCE+FHS+
Sbjct: 1973 TWAFCEAFHSA 1983

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI00017F0C90
          Length = 826

 Score =  285 bits (729), Expect = 2e-75
 Identities = 138/192 (71%), Positives = 162/192 (84%), Gaps = 1/192 (0%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           S+FNEILIRYAY+ LAP PEK  F   VCL+VYGDDNLISV+P+ ASWF GEAIRVTLAE
Sbjct: 351 SIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDNLISVSPAVASWFTGEAIRVTLAE 410

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTPSK 358
           K++KITDGSDKDAPTIE KPF ELDFLKRKF +  + G + APLD +AIFS L+WLTP K
Sbjct: 411 KRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEHGQVWAPLDKSAIFSCLHWLTPQK 470

Query: 359 DKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQF 538
            KF   +KA  Y GEVDV+EEL++NVNV+L+ELYLHND +EF RVRSF++ARLP+ VDQF
Sbjct: 471 SKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHNDKEEFNRVRSFYIARLPMQVDQF 530

Query: 539 RTWAFCESFHSS 574
           RTWAFCE+FHS+
Sbjct: 531 RTWAFCEAFHSA 542

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  285 bits (729), Expect = 2e-75
 Identities = 138/192 (71%), Positives = 162/192 (84%), Gaps = 1/192 (0%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNEILIRYAY+ LAP PEK  F   VCL+VYGDDNLISV+P+ ASWF GEAIRVTLAE
Sbjct: 1777 SIFNEILIRYAYKTLAPTPEKNSFGINVCLLVYGDDNLISVSPAVASWFTGEAIRVTLAE 1836

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTPSK 358
            K++KITDGSDKDAPTIE KPF ELDFLKRKF +  + G + APLD +AIFS L+WLTP K
Sbjct: 1837 KRIKITDGSDKDAPTIEAKPFSELDFLKRKFYVHPEHGQVWAPLDKSAIFSCLHWLTPQK 1896

Query: 359  DKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQF 538
             KF   +KA  Y GEVDV+EEL++NVNV+L+ELYLHND +EF RVRSF++ARLP+ VDQF
Sbjct: 1897 SKFALQEKACDYLGEVDVVEELIINVNVSLVELYLHNDKEEFNRVRSFYIARLPMQVDQF 1956

Query: 539  RTWAFCESFHSS 574
            RTWAFCE+FHS+
Sbjct: 1957 RTWAFCEAFHSA 1968

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI00003FE52F
          Length = 846

 Score =  196 bits (497), Expect = 1e-48
 Identities = 103/191 (53%), Positives = 130/191 (68%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           SVFNEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL +
Sbjct: 361 SVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETLKK 420

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
           K V ITDGSDK AP I+ K   ELDFLKR+FLKL+TGV+QAPLD+TAIFS L+W+TP   
Sbjct: 421 KNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGVVQAPLDLTAIFSCLHWVTPHPQ 480

Query: 362 KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
           K        Q    VD + EL LNV VAL ELYLH + +EFQRVR+F+  ++ +L   + 
Sbjct: 481 KMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNKEEFQRVRNFYTKKMNILPAGYY 539

Query: 542 TWAFCESFHSS 574
           TWA  E+FH S
Sbjct: 540 TWADREAFHMS 550

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  196 bits (497), Expect = 1e-48
 Identities = 103/191 (53%), Positives = 130/191 (68%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            SVFNEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL +
Sbjct: 1851 SVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETLKK 1910

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
            K V ITDGSDK AP I+ K   ELDFLKR+FLKL+TGV+QAPLD+TAIFS L+W+TP   
Sbjct: 1911 KNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGVVQAPLDLTAIFSCLHWVTPHPQ 1970

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
            K        Q    VD + EL LNV VAL ELYLH + +EFQRVR+F+  ++ +L   + 
Sbjct: 1971 KMPKGGAQLQVE-NVDTLYELALNVQVALTELYLHGNKEEFQRVRNFYTKKMNILPAGYY 2029

Query: 542  TWAFCESFHSS 574
            TWA  E+FH S
Sbjct: 2030 TWADREAFHMS 2040

[9][TOP]
>UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA9_9SECO
          Length = 985

 Score =  167 bits (424), Expect = 4e-40
 Identities = 89/189 (47%), Positives = 114/189 (60%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE+LIRY YR   P+P    F Q VCLIVYGDDNLISV P    +FNG+ I+  LA+
Sbjct: 628  SLFNEMLIRYVYRVTVPRPLVNNFNQEVCLIVYGDDNLISVKPDTMKYFNGDRIKEVLAK 687

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AIFSSLY++ P   
Sbjct: 688  FKVTITDGSDKNSPVLRAKPLKQLDFLKRGFKVQSDGRVLAPLDLQAIFSSLYYINP--- 744

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                         + + +  L LN  VAL ELYLHND ++F  VR+F+V ++        
Sbjct: 745  -------------QGNTLNSLFLNAQVALRELYLHNDIEQFTAVRNFYVTQIGGNFLNLP 791

Query: 542  TWAFCESFH 568
             W  C +FH
Sbjct: 792  QWRHCAAFH 800

[10][TOP]
>UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus
           RepID=UPI00003FE53F
          Length = 711

 Score =  167 bits (423), Expect = 5e-40
 Identities = 88/189 (46%), Positives = 116/189 (61%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           S+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  LA+
Sbjct: 354 SLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILAK 413

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
            KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P   
Sbjct: 414 YKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP--- 470

Query: 362 KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                        + ++++ L LN  VAL ELYLH D ++F  VR+F+V ++        
Sbjct: 471 -------------QGNILKSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLSLP 517

Query: 542 TWAFCESFH 568
            W  C SFH
Sbjct: 518 QWRHCASFH 526

[11][TOP]
>UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA7_9SECO
          Length = 985

 Score =  167 bits (423), Expect = 5e-40
 Identities = 88/189 (46%), Positives = 116/189 (61%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  LA+
Sbjct: 628  SLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILAK 687

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P   
Sbjct: 688  YKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP--- 744

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                         + ++++ L LN  VAL ELYLH D ++F  VR+F+V ++        
Sbjct: 745  -------------QGNILKSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLSLP 791

Query: 542  TWAFCESFH 568
             W  C SFH
Sbjct: 792  QWRHCASFH 800

[12][TOP]
>UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE
            RASPBERRY) RepID=POL1_TORVR
          Length = 2197

 Score =  167 bits (423), Expect = 5e-40
 Identities = 88/189 (46%), Positives = 116/189 (61%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  LA+
Sbjct: 1840 SLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILAK 1899

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P   
Sbjct: 1900 YKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP--- 1956

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                         + ++++ L LN  VAL ELYLH D ++F  VR+F+V ++        
Sbjct: 1957 -------------QGNILKSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLSLP 2003

Query: 542  TWAFCESFH 568
             W  C SFH
Sbjct: 2004 QWRHCASFH 2012

[13][TOP]
>UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA8_9SECO
          Length = 985

 Score =  167 bits (422), Expect = 7e-40
 Identities = 88/189 (46%), Positives = 114/189 (60%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  LA 
Sbjct: 628  SLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILAR 687

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P   
Sbjct: 688  YKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP--- 744

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                         + +++  L LN  VAL ELYLH D ++F  VR+F+V ++        
Sbjct: 745  -------------QGNILNSLFLNAQVALRELYLHGDVEQFTAVRNFYVKQIGGNFLSLP 791

Query: 542  TWAFCESFH 568
             W  C SFH
Sbjct: 792  QWRHCASFH 800

[14][TOP]
>UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA6_9SECO
          Length = 985

 Score =  166 bits (420), Expect = 1e-39
 Identities = 88/189 (46%), Positives = 114/189 (60%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE+LIRY YR   P+P    F+Q VCLIVYGDDNLIS+ P    +FNGE I+  LA 
Sbjct: 628  SLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILAN 687

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             KV ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P   
Sbjct: 688  IKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP--- 744

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                         + +++  L LN  VAL ELYLH D ++F  VR+F+V ++        
Sbjct: 745  -------------QGNILNSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLSLP 791

Query: 542  TWAFCESFH 568
             W  C SFH
Sbjct: 792  QWRHCASFH 800

[15][TOP]
>UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot
           virus RepID=Q155U1_9SECO
          Length = 711

 Score =  162 bits (410), Expect = 2e-38
 Identities = 85/189 (44%), Positives = 114/189 (60%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           S+FNE+LI Y YR   P+     F+Q VCLIVYGDDNLIS+ P    +FNGE I+ TLA+
Sbjct: 354 SLFNELLIGYVYRVTVPRSLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKSTLAK 413

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
            ++ ITDGSDK++P +  KP  +LDFLKR F     G + APLD+ AI+SSLY++ P   
Sbjct: 414 YRITITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINP--- 470

Query: 362 KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                        + +++  L LN  VAL ELYLH D ++F  VR+F+V ++        
Sbjct: 471 -------------QGNILNSLFLNAQVALRELYLHGDVEQFTAVRNFYVKQIGGNFLNLP 517

Query: 542 TWAFCESFH 568
            W  C SFH
Sbjct: 518 QWRHCASFH 526

[16][TOP]
>UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud
            Blight RepID=POL1_TRSVB
          Length = 2304

 Score =  155 bits (393), Expect = 2e-36
 Identities = 86/174 (49%), Positives = 107/174 (61%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            SVFNEILIRY Y+ + P PE  RF+  V L+VYGDDNLI+V PS    F GE I+ TLA 
Sbjct: 1852 SVFNEILIRYVYKTVIPSPEFNRFETFVTLVVYGDDNLIAVDPSMQKIFTGEVIKKTLAR 1911

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
            KK+ ITDGSDK +P +E KP  +LDFLKR FL  D+G +   LD T I+SSL +L     
Sbjct: 1912 KKITITDGSDKLSPVLEAKPLAQLDFLKRSFLVSDSGQVMPALDRTCIYSSLLYLR---- 1967

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL 523
                       S + D I  L  NV  AL ELY   D +EF  +R+F++ RLP+
Sbjct: 1968 -----------SADCDPIPLLHQNVQNALQELYYRQDREEFDNLRTFYLERLPM 2010

[17][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score =  150 bits (378), Expect = 9e-35
 Identities = 82/191 (42%), Positives = 111/191 (58%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNEIL+R  Y+ + P   +  F + V L+VYGDDNLI+V PS    FNG+ I+ T+A+
Sbjct: 1549 SIFNEILVRMVYKTVVPGVPRNHFNEYVTLLVYGDDNLIAVDPSILEVFNGDVIKKTMAK 1608

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             +V ITDGSDK +PT+  KP   LDFLKR F   D G + APLD TAI+SSL+W+     
Sbjct: 1609 WRVTITDGSDKLSPTLTEKPLLSLDFLKRGFKLADNGQVYAPLDKTAIYSSLHWVAGRGQ 1668

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQFR 541
                           DV+  L  N   AL+E++ H D  EF  +RSF+V+++P   D   
Sbjct: 1669 ---------------DVMSALKDNARSALIEMWAHQDKAEFVELRSFYVSKIPSWSD-LP 1712

Query: 542  TWAFCESFHSS 574
            TW     FH +
Sbjct: 1713 TWDQARCFHEA 1723

[18][TOP]
>UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus
            RepID=POL1_GFLV
          Length = 2284

 Score =  141 bits (356), Expect = 3e-32
 Identities = 77/190 (40%), Positives = 113/190 (59%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+F E+L+RY ++K+ P   K  F + V LI YGDDN+ +VA S   +F G+A+++ +A+
Sbjct: 1804 SIFKELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNVFTVAQSVMQYFTGDALKMQMAK 1863

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
              V ITDG DK   TI  +P  EL+FLKR F++   G+I APL+  +I SSL ++     
Sbjct: 1864 LGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGGMINAPLEKLSIMSSLVYIR---- 1919

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVDQF 538
                       S   D++++L+ NVN AL+ELYLH D   F+ VR+F+  +LP     + 
Sbjct: 1920 -----------SDGSDMLQKLLDNVNTALVELYLHGDRTYFESVRAFYFEKLPPGAYKEL 1968

Query: 539  RTWAFCESFH 568
             TW   ESFH
Sbjct: 1969 TTWFQAESFH 1978

[19][TOP]
>UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus
           RepID=UPI00003FE537
          Length = 825

 Score =  135 bits (339), Expect = 3e-30
 Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           S+FNE+L+RY Y+K+ P   +  F + V LI YGDDN+ +V+ S  + F G+A++  +A 
Sbjct: 344 SIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQSIMTSFTGDALKAEMAN 403

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             V ITDG DK   TI  +P  EL+FLKR F K + G+I APL+  +I SSL ++     
Sbjct: 404 LGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGLIYAPLEKLSIMSSLVYIR---- 459

Query: 362 KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVDQF 538
                      S   D++++LV NVN AL+ELYLH D +  + VR F++ +LP     + 
Sbjct: 460 -----------SDGSDMLQKLVDNVNTALVELYLHQDREYSESVRDFYLEKLPPGSYKEL 508

Query: 539 RTWAFCESFH 568
            TW   + FH
Sbjct: 509 TTWYEAQIFH 518

[20][TOP]
>UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW
            RepID=POL1_ARMVN
          Length = 2284

 Score =  135 bits (339), Expect = 3e-30
 Identities = 76/190 (40%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE+L+RY Y+K+ P   +  F + V LI YGDDN+ +V+ S  + F G+A++  +A 
Sbjct: 1803 SIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQSIMTSFTGDALKAEMAN 1862

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
              V ITDG DK   TI  +P  EL+FLKR F K + G+I APL+  +I SSL ++     
Sbjct: 1863 LGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGLIYAPLEKLSIMSSLVYIR---- 1918

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVDQF 538
                       S   D++++LV NVN AL+ELYLH D +  + VR F++ +LP     + 
Sbjct: 1919 -----------SDGSDMLQKLVDNVNTALVELYLHQDREYSESVRDFYLEKLPPGSYKEL 1967

Query: 539  RTWAFCESFH 568
             TW   + FH
Sbjct: 1968 TTWYEAQIFH 1977

[21][TOP]
>UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV
          Length = 2285

 Score =  134 bits (336), Expect = 6e-30
 Identities = 74/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE+L+RY ++K+ P   +  F + V LI YGDDN+ +V+ S    F G+A++  +A 
Sbjct: 1805 SIFNELLMRYCFKKIVPPVYRECFDRCVVLITYGDDNVFTVSQSIMESFTGDALKAEMAN 1864

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
              V ITDG DK   TI  +P  EL+FLKR   K + G+I APL+  +I SSL ++     
Sbjct: 1865 VGVTITDGKDKSLATIPARPLLELEFLKRGIKKGNGGMIYAPLEKLSIMSSLVYIR---- 1920

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPL-LVDQF 538
                       S   D++++LV NVN AL+EL+LH D + F  VR+F++ +LP     + 
Sbjct: 1921 -----------SDGSDMLQKLVDNVNTALVELFLHQDKEYFDSVRNFYLEKLPPGSYKEL 1969

Query: 539  RTWAFCESFH 568
             TW   ++FH
Sbjct: 1970 TTWYQAQTFH 1979

[22][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score =  131 bits (330), Expect = 3e-29
 Identities = 74/168 (44%), Positives = 97/168 (57%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           S+FNE LIR+ +R       + RF Q V L++YGDDNLI+V P     FNGE IR  LA+
Sbjct: 345 SIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNLIAVHPDYLPHFNGEIIRTRLAD 404

Query: 182 KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
             V ITDGSDK A  IE KP  +LDFLKR+F KL+ G + APLD+ ++++SL  +T    
Sbjct: 405 VNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGTVYAPLDLASVYTSLQNVTMGAG 464

Query: 362 KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFF 505
             H                 L  NV+ AL+ELYLH +   F  +R F+
Sbjct: 465 SIHI---------------ALQNNVHNALLELYLHGNETWFNHLRDFY 497

[23][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score =  131 bits (330), Expect = 3e-29
 Identities = 74/168 (44%), Positives = 97/168 (57%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNE LIR+ +R       + RF Q V L++YGDDNLI+V P     FNGE IR  LA+
Sbjct: 1732 SIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIYGDDNLIAVHPDYLPHFNGEIIRTRLAD 1791

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
              V ITDGSDK A  IE KP  +LDFLKR+F KL+ G + APLD+ ++++SL  +T    
Sbjct: 1792 VNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRKLNDGTVYAPLDLASVYTSLQNVTMGAG 1851

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFF 505
              H                 L  NV+ AL+ELYLH +   F  +R F+
Sbjct: 1852 SIHI---------------ALQNNVHNALLELYLHGNETWFNHLRDFY 1884

[24][TOP]
>UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus
            RepID=O37086_9SECO
          Length = 2150

 Score =  118 bits (295), Expect = 4e-25
 Identities = 68/174 (39%), Positives = 101/174 (58%), Gaps = 1/174 (0%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNEILIRY YRK+ P P    F + V L+VYGDDNL+++      +F+G  I+  +A 
Sbjct: 1783 SIFNEILIRYVYRKVTPAPACNFFNKYVRLMVYGDDNLLTIKEEVIPFFDGPVIKREMAS 1842

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 361
              + ITDG+DK + T+E KP   L+FLKR F   + G++ APLD T++++ L++L  +  
Sbjct: 1843 VGITITDGTDKSSLTLERKPLASLEFLKRGFRVQENGLVVAPLDKTSMYTRLFYLPLALM 1902

Query: 362  KFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-NDSKEFQRVRSFFVARLP 520
             F     +               NV   L E+ LH N  +EF RVR+F+V++ P
Sbjct: 1903 AFIPGYFSKG-------------NVKSFLEEIVLHPNHRREFYRVRNFYVSKAP 1943

[25][TOP]
>UniRef100_B9UKJ7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cocoa necrosis
           virus RepID=B9UKJ7_9SECO
          Length = 76

 Score =  111 bits (277), Expect = 5e-23
 Identities = 53/68 (77%), Positives = 61/68 (89%)
 Frame = +2

Query: 11  NEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKV 190
           +EILIRYAY+KLAPKP++  F  +VCL+VYGDDNLISV+PS ASWF GEAIRV LAEKK+
Sbjct: 9   HEILIRYAYKKLAPKPQRNLFGVSVCLLVYGDDNLISVSPSIASWFTGEAIRVCLAEKKI 68

Query: 191 KITDGSDK 214
           KITDGSDK
Sbjct: 69  KITDGSDK 76

[26][TOP]
>UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring
           virus RepID=B4ZF31_9SECO
          Length = 73

 Score =  107 bits (266), Expect = 9e-22
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           SVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF GEAIR+TLAE
Sbjct: 11  SVFNEILIRYAYKKLAPVPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRITLAE 70

Query: 182 KK 187
           KK
Sbjct: 71  KK 72

[27][TOP]
>UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO
          Length = 2366

 Score =  103 bits (257), Expect = 9e-21
 Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNEIL+R AYR L P  E+  F   V LIVYGDDN++ + P+  S FNG  I+  + E
Sbjct: 1908 SIFNEILVRCAYRSLVPDIERPFFSNNVVLIVYGDDNVLGIHPNIESVFNGNTIKAYMKE 1967

Query: 182  K-KVKITDGSDKDAPTIEPKPFWELDFLKRKFLK-LDTGVIQAPLDMTAIFSSLYWLTPS 355
            +  +KITDG+DK +P I+ +P  + +FLKR + K    G+ +APL  T+IFS L ++   
Sbjct: 1968 ELGIKITDGADKLSPVIDARPLEQCEFLKRTWRKDRQYGLYRAPLVETSIFSCLRYV--- 2024

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 535
                    +   Y  +  +++    NV  +L E  LH       R+   F    P  V++
Sbjct: 2025 --------RLQNYDWQAPLLQ----NVQGSLYEASLHGPEMH-DRIYKHFAMHFPKWVEE 2071

Query: 536  FRTWAF 553
               + +
Sbjct: 2072 HELYTY 2077

[28][TOP]
>UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO
          Length = 1858

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEIL+RY YRK+      P+P    F + V L+ YGDDNLISV+   A+ FNG  ++
Sbjct: 1499 SIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLISVSHVVANVFNGRTLK 1558

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              +A+  V ITDG DK +PT+E +     DFLKR F KL+  V  +P + +++++ L+++
Sbjct: 1559 AEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLVYDSPEEKSSLWAQLHYV 1617

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 469
              +                +D  E  ++N+N  L ELY+H+
Sbjct: 1618 NTT---------------SLDKQEAYLVNLNNVLKELYMHS 1643

[29][TOP]
>UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain
            cherry RepID=POL1_RRVC
          Length = 2367

 Score =  102 bits (254), Expect = 2e-20
 Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 2/186 (1%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+FNEIL+R AYR L P+ E+  F   V LIVYGDDN++ + P+  S FNG AI+  + E
Sbjct: 1909 SIFNEILVRCAYRSLVPEIERPFFSNNVVLIVYGDDNVLGIHPNIESAFNGNAIKAYMKE 1968

Query: 182  K-KVKITDGSDKDAPTIEPKPFWELDFLKRKFLK-LDTGVIQAPLDMTAIFSSLYWLTPS 355
            +  +KITDG+DK +P I  +P  + +FLKR + K    G+ +APL  T+I+S L ++   
Sbjct: 1969 ELGIKITDGADKLSPVICARPLEQCEFLKRTWRKDRQYGLYRAPLVETSIYSCLRYV--- 2025

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLLVDQ 535
                    +   Y  +  +++    NV  +L E  LH       R+   F    P  V++
Sbjct: 2026 --------RLQNYDWQAPLLQ----NVQGSLYEASLHGPDMH-ARIYKHFATHFPKWVEE 2072

Query: 536  FRTWAF 553
               + +
Sbjct: 2073 HELYTY 2078

[30][TOP]
>UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus
           RepID=UPI0000163D09
          Length = 711

 Score =  101 bits (251), Expect = 5e-20
 Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNEIL+RY YRK+      P+P    F + V L+ YGDDNLISV+   AS FNG  ++
Sbjct: 352 SIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLISVSHVVASVFNGRTLK 411

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
             +A+  V ITDG DK +PT+E +     DFLKR F KL+  +  +P + +++++ L+++
Sbjct: 412 AEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLIYDSPEEKSSLWAQLHYV 470

Query: 347 TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 469
             +                +D  E  ++N+N  L ELY+++
Sbjct: 471 NTT---------------NLDKQEAYLVNLNNVLKELYMYS 496

[31][TOP]
>UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO
          Length = 1858

 Score =  101 bits (251), Expect = 5e-20
 Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 5/161 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEIL+RY YRK+      P+P    F + V L+ YGDDNLISV+   AS FNG  ++
Sbjct: 1499 SIFNEILVRYCYRKILEKNNVPRPLHVNFPRMVKLVTYGDDNLISVSHVVASVFNGRTLK 1558

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              +A+  V ITDG DK +PT+E +     DFLKR F KL+  +  +P + +++++ L+++
Sbjct: 1559 AEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLKRGF-KLNGLIYDSPEEKSSLWAQLHYV 1617

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 469
              +                +D  E  ++N+N  L ELY+++
Sbjct: 1618 NTT---------------NLDKQEAYLVNLNNVLKELYMYS 1643

[32][TOP]
>UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO
          Length = 1851

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  ++
Sbjct: 1492 SIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGDDNLISVHEYVKPYFSGSKLK 1551

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L+++
Sbjct: 1552 SFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHYV 1611

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
            +                  +++ E  ++N+   L ELYLH+  +E +++R   ++R+  L
Sbjct: 1612 S---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARQLRRKALSRIEWL 1655

Query: 527  VD-QFRTWAFCESFHS 571
                  T A  E FHS
Sbjct: 1656 QKADVPTIAQIEEFHS 1671

[33][TOP]
>UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO
          Length = 1851

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  ++
Sbjct: 1492 SIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFISLCVYGDDNLISVHEYVKPYFSGSKLK 1551

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L+++
Sbjct: 1552 SFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHYV 1611

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
            +                  +++ E  ++N+   L ELYLH+  +  Q +R   ++R+  L
Sbjct: 1612 S---------------CNNLEMQEAYLVNLVNVLRELYLHSPEEACQ-LRRRALSRIEWL 1655

Query: 527  VD-QFRTWAFCESFHS 571
                  T A  E FHS
Sbjct: 1656 QKADVPTIAQIEEFHS 1671

[34][TOP]
>UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle
           virus RepID=POL1_APMV
          Length = 729

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 5/179 (2%)
 Frame = +2

Query: 5   VFNEILIRYAYRKLAPK----PEKCR-FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 169
           +FNE+L+RY ++K+  +    P +C  F   +  +VYGDDNLISV+P     FNG+ ++ 
Sbjct: 377 IFNELLVRYCFKKIMREGGATPLECSAFDSYIRFVVYGDDNLISVSPVIHDKFNGKLLKE 436

Query: 170 TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLT 349
            +A   V ITDG DK  PT+E +P  + DFLKR F++    V  AP + +++++ L++++
Sbjct: 437 CMARFGVTITDGKDKTLPTLEFRPLEDCDFLKRGFIQRSELVWDAPEERSSLYTQLHYVS 496

Query: 350 PSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
                         Y+G +         VNV + ELY+H+  KE   +R   +  LP L
Sbjct: 497 TKMQSLE-----DAYTGNL---------VNV-IRELYMHS-PKEASDLRRKALRDLPWL 539

[35][TOP]
>UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus
           RepID=UPI0000163CF4
          Length = 710

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  ++
Sbjct: 351 SIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDDNLISVHEYVKPYFSGSKLK 410

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
             LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L+++
Sbjct: 411 SFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHYV 470

Query: 347 TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
           +                  +++ E  ++N+   L ELYLH+  +E +R+R   ++ +  L
Sbjct: 471 S---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARRLRRKALSCIEWL 514

Query: 527 VD-QFRTWAFCESFHS 571
                 T A  E FHS
Sbjct: 515 QKADVPTIAQIEEFHS 530

[36][TOP]
>UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO
          Length = 1851

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNE+LIRY+Y KL     AP      F+  V L VYGDDNLISV      +F+G  ++
Sbjct: 1492 SIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDDNLISVHEYVKPYFSGSKLK 1551

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              LA   + ITDG DK + T++ +   + DFLKR F ++   +  AP D  +++S L+++
Sbjct: 1552 SFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSNVLWVAPEDKASLWSQLHYV 1611

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
            +                  +++ E  ++N+   L ELYLH+  +E +++R   ++R+  L
Sbjct: 1612 S---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARQLRRKALSRIEWL 1655

Query: 527  VD-QFRTWAFCESFHS 571
                  T A  E FHS
Sbjct: 1656 QKADVPTIAQIEEFHS 1671

[37][TOP]
>UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain
            Kentucky G7) RepID=POL1_BPMV
          Length = 1850

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNE+LIRY+Y KL     AP      F+  + L VYGDDNLISV      +F+G  ++
Sbjct: 1491 SIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFISLCVYGDDNLISVHEYVKPYFSGSKLK 1550

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              LA   + ITDG DK + T++ +   E DFLKR F ++   +  AP D  +++S L+++
Sbjct: 1551 SFLASHNITITDGIDKTSATLQFRKLSECDFLKRNFKQMSNVLWVAPEDKASLWSQLHYV 1610

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
            +                  +++ E  ++N+   L ELYLH+  +E +R+R   ++ +  L
Sbjct: 1611 S---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARRLRRKALSCIEWL 1654

Query: 527  VD-QFRTWAFCESFHS 571
                  T A  E FHS
Sbjct: 1655 QKADVPTIAQIEEFHS 1670

[38][TOP]
>UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO
          Length = 1851

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNE+LIRY+Y KL     AP      F+  V L VYGDDN ISV      +F+G  ++
Sbjct: 1492 SIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFVSLCVYGDDNFISVHEYVKPYFSGSKLK 1551

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              LA   + ITDG DK + T++ +   + DFLKR F ++   +  AP D  +++S L+++
Sbjct: 1552 SFLAGHNITITDGIDKTSATLQFRKLADCDFLKRNFKQMSNVLWVAPEDKASLWSQLHYV 1611

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
            +                  +++ E  ++N+   L ELYLH+  +E +++R   ++R+  L
Sbjct: 1612 S---------------CNNLEMQEAYLVNLVNVLRELYLHS-PEEARQLRRKALSRIEWL 1655

Query: 527  VD-QFRTWAFCESFHS 571
                  T A  E FHS
Sbjct: 1656 QKADVPTIAQIEEFHS 1671

[39][TOP]
>UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus
           RepID=UPI0000163D14
          Length = 711

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNEILIRY Y+KL     AP+     F + + L+ YGDDNLISV      +F+G+ ++
Sbjct: 351 SIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDDNLISVNAVVTPYFDGKKLK 410

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
            +LA+  V ITDG DK +  +  +   E DFLKR F++  + +  AP D  +++S L+++
Sbjct: 411 QSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSSTIWDAPEDKASLWSQLHYV 470

Query: 347 TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQR 490
                  +  +K   Y          + NV   L ELY+H+  ++ EF+R
Sbjct: 471 -----NCNNCEKEVAY----------LTNVVNVLRELYMHSPREATEFRR 505

[40][TOP]
>UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus
            RepID=POL1_CPMV
          Length = 1866

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEILIRY Y+KL     AP+     F + + L+ YGDDNLISV      +F+G+ ++
Sbjct: 1506 SIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDDNLISVNAVVTPYFDGKKLK 1565

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
             +LA+  V ITDG DK +  +  +   E DFLKR F++  + +  AP D  +++S L+++
Sbjct: 1566 QSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRTFVQRSSTIWDAPEDKASLWSQLHYV 1625

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQR 490
                   +  +K   Y          + NV   L ELY+H+  ++ EF+R
Sbjct: 1626 -----NCNNCEKEVAY----------LTNVVNVLRELYMHSPREATEFRR 1660

[41][TOP]
>UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus
           RepID=UPI0000163D04
          Length = 713

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNEIL+RY Y+ L     AP      F+  + ++ YGDDNLISV      +F+G  ++
Sbjct: 352 SIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDDNLISVNAVVKPYFDGTKLK 411

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
             +A   + ITDG DK + T+E +   + DFLKR FLK  + +  AP +  ++++ L+++
Sbjct: 412 QAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSSVLWDAPEEKASLWAQLHYV 471

Query: 347 TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 454
             +    +   + +  +  V+V+ EL ++    ++E
Sbjct: 472 NVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 503

[42][TOP]
>UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO
          Length = 1853

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 59/177 (33%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAYR         R  F   V L+VYGDDNLISV+ + +S FNGE +    
Sbjct: 1500 SILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLISVSDAISSKFNGEFLVDFF 1559

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                + +TDG DK    I  +   + DFLKR F  L  G    P+   +++  L+++   
Sbjct: 1560 LRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEWVGPMSRESLWPQLHFVRAK 1619

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
            K               +++ +  V N+N  L EL+LH  S+E   +R   V  L  L
Sbjct: 1620 K---------------LEMADAYVANLNNILRELWLHG-SEEVTELRRMAVKTLKWL 1660

[43][TOP]
>UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus
            RepID=POL1_RCMV
          Length = 1864

 Score = 85.9 bits (211), Expect = 2e-15
 Identities = 49/156 (31%), Positives = 87/156 (55%), Gaps = 5/156 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEIL+RY Y+ L     AP      F+  + ++ YGDDNLISV      +F+G  ++
Sbjct: 1503 SIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLISMVTYGDDNLISVNAVVKPYFDGTKLK 1562

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              +A   + ITDG DK + T+E +   + DFLKR FLK  + +  AP +  ++++ L+++
Sbjct: 1563 QAMARNGIIITDGKDKTSATLEFRRLEDCDFLKRGFLKRSSVLWDAPEEKASLWAQLHYV 1622

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 454
              +    +   + +  +  V+V+ EL ++    ++E
Sbjct: 1623 NVN----NCEMQVAYMTNLVNVLRELYMHDPTEMVE 1654

[44][TOP]
>UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus
           RepID=UPI000180D482
          Length = 474

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 2/174 (1%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
           S+ NEIL++YAYR         R  F   V L+VYGDDNLISV+ + +S FNGE +    
Sbjct: 315 SILNEILVKYAYRMCFADNPMIRESFDTHVALVVYGDDNLISVSDAISSKFNGEFLVDFF 374

Query: 176 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
               + +TDG DK    I  +   + DFLKR F  L  G    P+   +++  L+++   
Sbjct: 375 LRLSITVTDGVDKTKQGISFRKLTDCDFLKRNFKVLPDGEWVGPMSRESLWPQLHFVRAK 434

Query: 356 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARL 517
           K               +++ +  V N+N  L EL+LH  S+E   +R   V  L
Sbjct: 435 K---------------LEMADAYVANLNNILRELWLHG-SEEVTELRRMAVKTL 472

[45][TOP]
>UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus
           RepID=Q06RG7_9SECO
          Length = 396

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNEILIRY+++ +  K +        F + V ++ YGDDNL+SV+     +F+G+ ++
Sbjct: 153 SIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDDNLLSVSEVVKPYFDGKRLK 212

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLYW 343
             LA+ KV ITDG DK +P +  +   + DFLKR F K   G+   AP +  ++++ L++
Sbjct: 213 EFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKNGIFWNAPEEKESLWAQLHY 272

Query: 344 LTPSKDKFHTHQKASQYSGEVDVIEELVL---NVNVALMELYLHNDSKEFQRVRSFFVAR 514
           +  +  + H   K +     V+V+ EL +   N   AL +       K  QRV     + 
Sbjct: 273 INVTNLEQHEAYKTNL----VNVLRELYMWDVNECSALRK-------KALQRVEWLVPSD 321

Query: 515 LPLLVDQFRTWAFC 556
           LP +      +A C
Sbjct: 322 LPTVAQIEEWYATC 335

[46][TOP]
>UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO
          Length = 1857

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEILIRY+++ +  K +        F + V ++ YGDDNL+SV+     +F+G+ ++
Sbjct: 1497 SIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDDNLLSVSEVVKPYFDGKRLK 1556

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLYW 343
              LA+ KV ITDG DK +P +  +   + DFLKR F K   G+   AP +  ++++ L++
Sbjct: 1557 EFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKNGIFWNAPEEKESLWAQLHY 1616

Query: 344  LTPSKDKFHTHQKASQYSGEVDVIEELVL---NVNVALMELYLHNDSKEFQRVRSFFVAR 514
            +  +  + H   K +     V+V+ EL +   N   AL +       K  QRV     + 
Sbjct: 1617 INVTNLEQHEAYKTNL----VNVLRELYMWDVNECSALRK-------KALQRVEWLVPSD 1665

Query: 515  LPLLVDQFRTWAFC 556
            LP +      +A C
Sbjct: 1666 LPTVAQIEEWYATC 1679

[47][TOP]
>UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO
          Length = 1860

 Score = 84.3 bits (207), Expect = 6e-15
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPE-----KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEILIRY+++ +  K +        F + V ++ YGDDNL+SV+     +F+G+ ++
Sbjct: 1500 SIFNEILIRYSFKAIMRKQKVPGLISISFDKYVGMVTYGDDNLLSVSEVVKPYFDGKRLK 1559

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLYW 343
              LA+ KV ITDG DK +P +  +   + DFLKR F K   G+   AP +  ++++ L++
Sbjct: 1560 EFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFRKDKNGIFWNAPEEKESLWAQLHY 1619

Query: 344  LTPSKDKFHTHQKASQYSGEVDVIEELVL---NVNVALMELYLHNDSKEFQRVRSFFVAR 514
            +  +  + H   K +     V+V+ EL +   N   AL +       K  QRV     + 
Sbjct: 1620 INVTNLEQHEAYKTNL----VNVLRELYMWDVNECSALRK-------KALQRVEWLVPSD 1668

Query: 515  LPLLVDQFRTWAFC 556
            LP +      +A C
Sbjct: 1669 LPTVAQIEEWYATC 1682

[48][TOP]
>UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO
          Length = 1853

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YA+R         R  F   V L+VYGDDNLISV+ + ++ FNGE +    
Sbjct: 1500 SILNEILVKYAFRMCFADNPMVRESFDTHVSLVVYGDDNLISVSDAISAKFNGEFLVDFF 1559

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
             +  + +TDG DK    I  +   + DFLKR F  L  G    P+   +++  L+++   
Sbjct: 1560 LKLSITVTDGVDKTKKGISFRRLADCDFLKRGFKNLPDGEWIGPMSRESLWPQLHFVRAK 1619

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH--NDSKEFQR 490
            K               +++ +  V N+N  L EL+LH  N++ E +R
Sbjct: 1620 K---------------LEMADAYVANLNNILRELWLHSANEATELRR 1651

[49][TOP]
>UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO
          Length = 1860

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEILIRY+++ +      P      F + V ++ YGDDNL+SV+     +F+G+ ++
Sbjct: 1500 SIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDDNLLSVSEVVKPFFDGKRLK 1559

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLYW 343
              LA+ KV ITDG DK +P +  +   + DFLKR F K  +G    +P +  ++++ L++
Sbjct: 1560 EFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRSGFFWNSPEEKESLWAQLHY 1619

Query: 344  LTPSKDKFHTHQKASQYSGEVDVIEELV---LNVNVALMELYLHNDSKEFQRVRSFFVAR 514
            +  +  + H   K +     V+V+ EL    +N   AL +       K  QRV     + 
Sbjct: 1620 INVTNLEQHEAYKTNL----VNVLRELYMWDINECAALRK-------KALQRVSWLLPSD 1668

Query: 515  LPLLVDQFRTWAFC 556
            LP +    + +A C
Sbjct: 1669 LPTVAQIEKWYASC 1682

[50][TOP]
>UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot
           virus RepID=B2KL92_9SECO
          Length = 712

 Score = 81.6 bits (200), Expect = 4e-14
 Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNEILIRY+++ +      P      F + V ++ YGDDNL+SV+     +F+G+ ++
Sbjct: 352 SIFNEILIRYSFKAIMREQKVPDLIPISFDKYVGMVTYGDDNLLSVSEVVKPFFDGKRLK 411

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLYW 343
             LA+ KV ITDG DK +P +  +   + DFLKR F K  +G    +P +  ++++ L++
Sbjct: 412 EFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLKRGFKKDRSGFFWNSPEEKESLWAQLHY 471

Query: 344 LTPSKDKFHTHQKASQYSGEVDVIEELV---LNVNVALMELYLHNDSKEFQRVRSFFVAR 514
           +  +  + H   K +     V+V+ EL    +N   AL +       K  QRV     + 
Sbjct: 472 INVTNLEQHEAYKTNL----VNVLRELYMWDINECAALRK-------KALQRVSWLLPSD 520

Query: 515 LPLLVDQFRTWAFC 556
           LP +    + +A C
Sbjct: 521 LPTVAQIEKWYASC 534

[51][TOP]
>UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus
           RepID=Q2TCK2_9SECO
          Length = 709

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV+     +F+G+ ++
Sbjct: 354 SIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDDNLLSVSEVIKPYFDGKRLK 413

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
             LA  ++ ITDG DK +P ++ +   + DFLKR F                    LYW 
Sbjct: 414 EFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGFKN----------------RGLYWD 457

Query: 347 TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
            P + +    Q     +  ++  E    N+   L EL++  D KE   +R   + R+  L
Sbjct: 458 APEEKESLWAQLHYVNANNLEKHEAYKTNLVTVLRELFMW-DKKECAELRRKALQRISWL 516

Query: 527 V-DQFRTWAFCESFHS 571
           V    +T A  E++++
Sbjct: 517 VPSDLQTVAQIEAWYA 532

[52][TOP]
>UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO
          Length = 1853

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-----APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV+     +F+G+ ++
Sbjct: 1498 SIFNEILIRYSFKAILRSQKVPDMVSVSFDEYVSMVVYGDDNLLSVSEVIKPYFDGKRLK 1557

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              LA  ++ ITDG DK +P ++ +   + DFLKR F                    LYW 
Sbjct: 1558 EFLATLRITITDGKDKTSPFLQFRCLEDCDFLKRGFKN----------------RGLYWD 1601

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVARLPLL 526
             P + +    Q     +  ++  E    N+   L EL++  D KE   +R   + R+  L
Sbjct: 1602 APEEKESLWAQLHYVNANNLEKHEAYKTNLVTVLRELFMW-DKKECAELRRKALQRISWL 1660

Query: 527  V-DQFRTWAFCESFHS 571
            V    +T A  E++++
Sbjct: 1661 VPSDLQTVAQIEAWYA 1676

[53][TOP]
>UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2
           RepID=UPI0000163DDB
          Length = 697

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2   SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
           S+ NEIL++YAY    A  P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 349 SILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGNFLVKFM 408

Query: 176 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
               +K+TDG DK    IE +     DFLKR F     G  + P+   +++  L+++   
Sbjct: 409 EGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTWRCPMSKESLWPQLHYVKAK 468

Query: 356 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
           K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 469 K---------------LEMAEAYINNCNNILRELWLHDVAEAKEFR 499

[54][TOP]
>UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO
          Length = 1869

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAY    A  P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 1521 SILNEILVKYAYWHCFADNPTVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGNFLVKFM 1580

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +     DFLKR F     G  + P+   +++  L+++   
Sbjct: 1581 EGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMNPDGTWRCPMSKESLWPQLHYVKAK 1640

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
            K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1641 K---------------LEMAEAYINNCNNILRELWLHDVAEAKEFR 1671

[55][TOP]
>UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus
           RepID=UPI0000163CFC
          Length = 712

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
           S+FNE+L+RY+Y K+      P      F   V ++ YGDDNL+SV  +    F+G  ++
Sbjct: 350 SIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGDDNLLSVQSAITHVFDGTKLK 409

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
             L    + ITDG DK +P +  +   + DFLKR F K    V   P +  ++++ L+++
Sbjct: 410 EFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKESDVVWVGPEEKESLWAQLHYV 469

Query: 347 TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVR 496
           T +  + H               E  ++NV   + ELYLH D +E   +R
Sbjct: 470 TTNNLEKH---------------EAYLVNVVNVIRELYLH-DPREAAELR 503

[56][TOP]
>UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus
            (strain DG) RepID=POL1_CPSMV
          Length = 1858

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNE+L+RY+Y K+      P      F   V ++ YGDDNL+SV  +    F+G  ++
Sbjct: 1496 SIFNELLVRYSYIKICQQARVPATITYGFSTFVKMVTYGDDNLLSVQSAITHVFDGTKLK 1555

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              L    + ITDG DK +P +  +   + DFLKR F K    V   P +  ++++ L+++
Sbjct: 1556 EFLKLNGITITDGKDKTSPVLNFRNLEDCDFLKRGFKKESDVVWVGPEEKESLWAQLHYV 1615

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVR 496
            T +  + H               E  ++NV   + ELYLH D +E   +R
Sbjct: 1616 TTNNLEKH---------------EAYLVNVVNVIRELYLH-DPREAAELR 1649

[57][TOP]
>UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus
           RepID=UPI0000163DD4
          Length = 699

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2   SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
           S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 351 SILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVSFM 410

Query: 176 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
               +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 411 EGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 470

Query: 356 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
           K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 471 K---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 501

[58][TOP]
>UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO
          Length = 1870

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 1522 SILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVSFM 1581

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 1582 EGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 1641

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
            K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1642 K---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 1672

[59][TOP]
>UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO
          Length = 1769

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 1421 SILNEILVKYAYWHCFEDNPNVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVSFM 1480

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 1481 EGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 1540

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
            K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1541 K---------------LEMAEAYINNCNNILRELWLHDVREAKEFR 1571

[60][TOP]
>UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO
          Length = 1870

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 1522 SILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVSFM 1581

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 1582 EGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 1641

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
            K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1642 K---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 1672

[61][TOP]
>UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt
           virus 2 RepID=B8Y619_9SECO
          Length = 594

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2   SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
           S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 246 SILNEILVKYAYWHCFGDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVSFM 305

Query: 176 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
               +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 306 EGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 365

Query: 356 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
           K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 366 K---------------LEMAEAYINNCNNILCELWLHDVKEAKEFR 396

[62][TOP]
>UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO
          Length = 1870

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
 Frame = +2

Query: 2    SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 1522 SILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSRFDGNFLVSFM 1581

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 1582 EGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 1641

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRS 499
            K               +++ E  + N N  L EL+LH D KE +  R+
Sbjct: 1642 K---------------LEMAEAYINNCNNILRELWLH-DVKEAEEFRN 1673

[63][TOP]
>UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1
           RepID=UPI0000231CC7
          Length = 699

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
           S+ NEILI+YAY K        R  F   V ++VYGDDNLISV+ + +S FNG  +   +
Sbjct: 351 SILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDDNLISVSEAISSKFNGNFLVNFM 410

Query: 176 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
               +K+TDG DK    IE +   + DFLKRKF +   G     +    ++  L+++   
Sbjct: 411 CNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENADGTWSGVMAEEHLWPQLHFVKAK 470

Query: 356 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSK 478
           K               V++ E  + N N  L EL+L +  K
Sbjct: 471 K---------------VEMSEAYISNCNNILRELWLGSPEK 496

[64][TOP]
>UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO
          Length = 1869

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAY-RKLAPKP-EKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 1521 SILNEILVKYAYWHCFVDNPIVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGNFLVKFM 1580

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 1581 EGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKLNPDGTWRSPMSKESLWPQLHYVKAK 1640

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
            K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1641 K---------------LEMAEAYINNCNNILRELWLHDVIEAKEFR 1671

[65][TOP]
>UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1
          Length = 1842

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEILI+YAY K        R  F   V ++VYGDDNLISV+ + +S FNG  +   +
Sbjct: 1494 SILNEILIKYAYWKCFETESLIRDHFDTYVAMVVYGDDNLISVSEAISSKFNGNFLVNFM 1553

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +   + DFLKRKF +   G     +    ++  L+++   
Sbjct: 1554 CNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENADGTWSGVMAEEHLWPQLHFVKAK 1613

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSK 478
            K               V++ E  + N N  L EL+L +  K
Sbjct: 1614 K---------------VEMSEAYISNCNNILRELWLGSPEK 1639

[66][TOP]
>UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO
          Length = 280

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
 Frame = +2

Query: 2   SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
           S+ NEIL++YAY       P  +  F   V ++VYGDDNLISV+ + +S F+G  +   +
Sbjct: 127 SILNEILVKYAYWHCFEDNPSVQSNFDAHVSMVVYGDDNLISVSDAISSKFDGSFLVSFM 186

Query: 176 AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
               +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 187 EGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 246

Query: 356 KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEF 484
           K               +++ E  + N N  L EL+LH+  ++K+F
Sbjct: 247 K---------------LEMAEAYINNCNNILRELWLHDVKEAKDF 276

[67][TOP]
>UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1
          Length = 1842

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCR--FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEILI+YAY K        R  F   V + VYGDDNLISV+ + +S FNG  +   +
Sbjct: 1494 SILNEILIKYAYWKCFETESLIRDHFDTHVAMAVYGDDNLISVSEAISSRFNGNFLVNFM 1553

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
            A   +K+TDG DK    IE +     DFLKR+F +   G     +    ++  L+++   
Sbjct: 1554 ANLGIKVTDGVDKTKIGIEFRTIENCDFLKRRFKENTDGTWSGVMAEEHLWPQLHFVKAK 1613

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSK 478
            K               V++ E  + N N  L EL+L +  K
Sbjct: 1614 K---------------VEMSEAYISNCNNILRELWLEDPGK 1639

[68][TOP]
>UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO
          Length = 1853

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 49/149 (32%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV+     +F+G+ ++
Sbjct: 1498 SIFNEILIRYSFKAILRSQKIPDMIPVSFDEYVSMVVYGDDNLLSVSEVIKPYFDGKRLK 1557

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLYW 343
              LA   + ITDG DK +P ++ +   + DFLKR F   + G+   AP D  ++++ L++
Sbjct: 1558 DFLATLHITITDGKDKTSPFLQFRRLEDCDFLKRGF--KNRGLYWDAPEDKESLWAQLHY 1615

Query: 344  LTPSKDKFHTHQKASQYSGEVDVIEELVL 430
            +  +  + H   K +     V V+ EL +
Sbjct: 1616 VNANNLEKHEAYKTNL----VTVLRELFM 1640

[69][TOP]
>UniRef100_B4ZF30 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cycas necrotic
           stunt virus RepID=B4ZF30_CNSV
          Length = 73

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           SV NEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL +
Sbjct: 3   SVLNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETLKK 62

Query: 182 KKVKITDGSDK 214
           K V ITDGSDK
Sbjct: 63  KNVTITDGSDK 73

[70][TOP]
>UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO
          Length = 1853

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLA-----PKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIR 166
            S+FNEILIRY+++ +      P      F + V ++VYGDDNL+SV      +F+G+ ++
Sbjct: 1498 SIFNEILIRYSFKAILRSQKIPDMISVSFDEYVSMVVYGDDNLLSVNEVIKPYFDGKRLK 1557

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVI-QAPLDMTAIFSSLYW 343
              LA   + ITDG DK +P ++ +   + DFLKR F   + G+   AP +  ++++ L++
Sbjct: 1558 EFLATLHITITDGKDKTSPFLQFRCLEDCDFLKRGF--KNRGLYWDAPEEKESLWAQLHY 1615

Query: 344  LTPSKDKFHTHQKASQYSGEVDVIEELVL 430
            +  +  + H   K +     V V+ EL +
Sbjct: 1616 VNANNLEKHEAYKTNL----VTVLRELFM 1640

[71][TOP]
>UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO
          Length = 1870

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
 Frame = +2

Query: 2    SVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 175
            S+ NEIL++YAY       P  +  F   V +  YGDDNLISV+ + +S F+G  +   +
Sbjct: 1522 SILNEILVKYAYWHCFEDNPSVQSNFDAHVSMEEYGDDNLISVSDAISSKFDGSFLVSFI 1581

Query: 176  AEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS 355
                +K+TDG DK    IE +     DFLKR F     G  ++P+   +++  L+++   
Sbjct: 1582 EGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAK 1641

Query: 356  KDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN--DSKEFQ 487
            K               +++ E  + N N  L EL+LH+  ++KEF+
Sbjct: 1642 K---------------LEMAEAYINNCNNILRELWLHDVKEAKEFR 1672

[72][TOP]
>UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus
           RepID=Q3YC01_9SECO
          Length = 795

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKP------EKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
           S+ NE  +R+A++++           +    + V   VYGDDNL+SV+   +S +N  +I
Sbjct: 454 SLVNEFFLRFAWKRIVRASLGEAFVHRSIMDREVHFAVYGDDNLVSVSDKYSSLYNLVSI 513

Query: 164 RVTLAEKKVKITDG---SDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSS 334
              L E+ V + +G    ++D P   P P    DFLKR+F+   +G + APLD +++   
Sbjct: 514 SSFLRERGVVLKNGQCKDEEDFPPFSPSPS-TCDFLKRRFVLGSSGRVLAPLDKSSLLGC 572

Query: 335 LYWLTPSKD 361
            +W+  S+D
Sbjct: 573 AHWVRKSQD 581

[73][TOP]
>UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus
            RepID=Q9IJX4_CRPV
          Length = 1771

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
 Frame = +2

Query: 5    VFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 169
            ++N +++R  +    RKLAP+ +  + F++ V +I YGDDN ++++     WFN   I  
Sbjct: 1582 LYNSMIMRIVWILLARKLAPEMQSMKKFRENVSMISYGDDNCLNISDRVVEWFNQITISE 1641

Query: 170  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL---KLDTGVIQAPLDMTAIFSSLY 340
             + E K + TD   K    ++     E+ FLK++F+   +L   V  APL    I+  L 
Sbjct: 1642 QMKEIKHEYTD-EGKTGDMVKFPSLSEIHFLKKRFVFSHQLQRTV--APLQKDVIYEMLN 1698

Query: 341  WLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRS 499
            W                    +D  E L++N+N A  E+  H  S E+Q++RS
Sbjct: 1699 WT----------------RNTIDPNEILMMNINTAFREIVYHGKS-EYQKLRS 1734

[74][TOP]
>UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus
           RepID=UPI000043F357
          Length = 707

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
           S+ N   I ++Y KL  + E         F+Q V    YGDDNL+SV       FN   I
Sbjct: 359 SLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVNDVITEKFNLVKI 418

Query: 164 RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 340
              LAE  V + +G+DK+   + P  P  ++DFLKRKF+    G + APL+   I   L+
Sbjct: 419 ADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-GHVVAPLNPVNITERLH 477

Query: 341 WL 346
           W+
Sbjct: 478 WI 479

[75][TOP]
>UniRef100_Q769F2 RNA dependent RNA polymerase (Fragment) n=1 Tax=Satsuma dwarf virus
           RepID=Q769F2_SDV
          Length = 374

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 8/163 (4%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
           SV NE  +++++  +      A +   C F +   + VYGDDN +SVA   AS +N + I
Sbjct: 49  SVVNEFYLKWSWMGIMREAGYAKEASLCAFHEATEISVYGDDNFVSVATPVASLYNLKTI 108

Query: 164 RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFL-KLDTGVIQAPLDMTAIFSSL 337
              L+   VK+ DG+   + TI+P  P  E+DFLKRKF+    +  I  PL+  +I   L
Sbjct: 109 SEFLSRVGVKLGDGA--KSGTIKPFIPLEEVDFLKRKFVADSKSTAILCPLNKRSIEERL 166

Query: 338 YWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 466
           +++                 G  D I  L LN+  AL E + H
Sbjct: 167 FYV----------------RGGQDEIAALELNIATALCEAFFH 193

[76][TOP]
>UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV
          Length = 2250

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
            S+ N   I ++Y KL  + E         F+Q V    YGDDNL+SV       FN   I
Sbjct: 1902 SLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVNDVITEKFNLVKI 1961

Query: 164  RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 340
               LAE  V + +G+DK+   + P  P  ++DFLKRKF+    G + APL+   I   L+
Sbjct: 1962 ADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-GHVVAPLNPVNITERLH 2020

Query: 341  WL 346
            W+
Sbjct: 2021 WI 2022

[77][TOP]
>UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV
          Length = 2235

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 7/122 (5%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCR------FQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
            S+ N   I ++Y KL  + E         F+Q V    YGDDNL+SV       FN   I
Sbjct: 1887 SLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVNDVITERFNLVKI 1946

Query: 164  RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 340
               LAE  V + +G+DK+   + P  P  ++DFLKRKF+    G + APL+   I   L+
Sbjct: 1947 ADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFVHYQ-GHVVAPLNPVNITERLH 2005

Query: 341  WL 346
            W+
Sbjct: 2006 WI 2007

[78][TOP]
>UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO
          Length = 2158

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 157
            S+ NE  +RYA+  L  +P         K      + + VYGDDNL++V P    W+   
Sbjct: 1455 SLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAVYGDDNLVAV-PMELQWYTLP 1513

Query: 158  AIRVTLAEKKVKITDGSDKDAPTIEPK--PFWELDFLKRKFLKLDTGVIQAPLDMTAIFS 331
            AI   L    V I +G DK+      K     EL FL R F +   G +QAPL   +I  
Sbjct: 1514 AIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRGFKRHRLGYVQAPLKWVSIIE 1573

Query: 332  SLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 454
             +YW+ PS          +   T  + + + G   V E+LV +V  AL E
Sbjct: 1574 PMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKLVTDVQNALKE 1622

[79][TOP]
>UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus
           RepID=UPI0000164A53
          Length = 709

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
           S+ N   + +AY KL + +  K       F+  V   VYGDDNLISV  +    FN   I
Sbjct: 359 SLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNLISVHDTIKDTFNLVTI 418

Query: 164 RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 340
              L E  V + +G+DK+   + P  P  ++DFLKR+F  L  G I APL+   I   L+
Sbjct: 419 SNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-GHIVAPLNTVNITERLH 477

Query: 341 WL 346
           W+
Sbjct: 478 WV 479

[80][TOP]
>UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus
            RepID=Q9JGP2_9SECO
          Length = 2079

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL-APKPEKC-----RFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
            S+ N   + +AY KL + +  K       F+  V   VYGDDNLISV  +    FN   I
Sbjct: 1729 SLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTLVSYAVYGDDNLISVHDTIKDTFNLVTI 1788

Query: 164  RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLY 340
               L E  V + +G+DK+   + P  P  ++DFLKR+F  L  G I APL+   I   L+
Sbjct: 1789 SNLLLEHGVTLKNGADKNEEILSPFYPIEKVDFLKRRFTTLQ-GHIVAPLNTVNITERLH 1847

Query: 341  WL 346
            W+
Sbjct: 1848 WV 1849

[81][TOP]
>UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO
          Length = 2158

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 157
            S+ NE  +RYA+  L  +P         K      + + VYGDDNL++V P    W+   
Sbjct: 1455 SLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFNKLFVAVYGDDNLVAV-PMELHWYTLP 1513

Query: 158  AIRVTLAEKKVKITDGSDKDAPTIEPK--PFWELDFLKRKFLKLDTGVIQAPLDMTAIFS 331
            AI   L    V I +G DK+      K     EL FL R F +   G +QAPL   +I  
Sbjct: 1514 AIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSELTFLSRGFKRHRLGYVQAPLKWVSIIE 1573

Query: 332  SLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 454
             +YW+ PS          +   T  + + + G   V E+LV +V  AL E
Sbjct: 1574 PMYWIRPSVGCPDALAMLENIDTGVREAFHHGP-QVFEKLVTDVQNALKE 1622

[82][TOP]
>UniRef100_A4UVR7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR7_SDV
          Length = 319

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
 Frame = +2

Query: 65  CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KP 241
           C F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+   + TI+P  P
Sbjct: 21  CAFHEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIP 78

Query: 242 FWELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVI 415
             E+DFLKR+F+  D+G   I  PL   +I   L+++                 G  D +
Sbjct: 79  LEEVDFLKRQFI-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDEL 121

Query: 416 EELVLNVNVALMELYLH 466
             L LNV  AL E + H
Sbjct: 122 AALELNVATALCEAFFH 138

[83][TOP]
>UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B
            RepID=A7KCA2_9VIRU
          Length = 1614

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
            S+ N + +RY Y  L P+     F+  V L+ YGDDN++SV+  C  WFN  +I  T A 
Sbjct: 1299 SIVNSLRMRYVYFMLNPEHTVTTFKDNVNLMTYGDDNIMSVSREC-DWFNHTSISETFAT 1357

Query: 182  KKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD-TGVIQAPLDMTAIFSSLYWLTPSK 358
              +  T  +DK++ ++      +  FLKR +   D  G   APL+  +I  SL   T SK
Sbjct: 1358 LNIVYT-MADKESASVPFINIKDASFLKRTWRMDDQLGCYVAPLEEESIEKSLMVWTRSK 1416

[84][TOP]
>UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU
          Length = 2155

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPE--------KCRFQQTVCLIVYGDDNLISVAPSCASWFNGE 157
            S+ NE  +RYA+  L  +P         K      + + VYGDDNL++V P    W++  
Sbjct: 1458 SLLNEFYMRYAFISLLRRPHIAARAIGVKPHDFNQLFVAVYGDDNLVAV-PLHLQWYSLP 1516

Query: 158  AIRVTLAEKKVKITDGSDK--DAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFS 331
             I   L    V I +G DK  D   ++ +   EL FL R F +   G   APL   +I  
Sbjct: 1517 NIAQELDMVNVVIKNGLDKSMDVNEVQFQDLSELTFLSRGFKRHALGYHMAPLKWVSIIE 1576

Query: 332  SLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 454
             +YW+ P+          +   T  + + + G+V   E+LV +V  AL E
Sbjct: 1577 PMYWIRPAPGCPDAQAMMENVETGIREAFHHGQV-AYEKLVADVQEALNE 1625

[85][TOP]
>UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO
          Length = 2151

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLIVYGDDNLISVAPSCASWFNG 154
            S+ NE  +RYA+  L  +P         +   F Q + + VYGDDNL++V P    W++ 
Sbjct: 1456 SLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIAVYGDDNLVAV-PLHLQWYSL 1513

Query: 155  EAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIF 328
              I   L    V I +G DK  D   ++ +   EL FL R F +   G   APL   +I 
Sbjct: 1514 PNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSRGFKRHALGYHMAPLKWVSII 1573

Query: 329  SSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 454
              +YW+ P+          +   T  + + + G V   ++LVL+V  AL E
Sbjct: 1574 EPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDKLVLDVQTALDE 1623

[86][TOP]
>UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU
          Length = 1759

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
 Frame = +2

Query: 5    VFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRV 169
            ++N I++R ++     K  P+ +  + F + V LI YGDDN++++      WFN   I  
Sbjct: 1570 LYNSIIMRLSWIRVMEKFQPRLKSMKWFNEYVALITYGDDNVLNIDAKVVEWFNQINISE 1629

Query: 170  TLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL---KLDTGVIQAPLDMTAIFSSLY 340
             + E + + TD + K    ++ +   ++ FLKRKF    +L   V  APL +  I+  L 
Sbjct: 1630 VMTEMRHEYTDEA-KTGDIVKSRKLEDIFFLKRKFRFSPELQRHV--APLKIEVIYEMLN 1686

Query: 341  WLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQRVRSFFVA 511
            W   S                +D  E L+ N+  A  E+  H   +E+ ++RS  +A
Sbjct: 1687 WSRRS----------------IDPDEILMSNIETAFREVVYHG-KEEYDKLRSAVLA 1726

[87][TOP]
>UniRef100_A4UVR5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR5_SDV
          Length = 319

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
 Frame = +2

Query: 71  FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFW 247
           F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+   + TI+P  P  
Sbjct: 23  FYEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIPLE 80

Query: 248 ELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEE 421
           E+DFLKR+F+  D+G   I  PL   +I   L+++                 G  D +  
Sbjct: 81  EVDFLKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELAA 123

Query: 422 LVLNVNVALMELYLH 466
           L LNV  AL E + H
Sbjct: 124 LELNVATALCEAFFH 138

[88][TOP]
>UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus
           RepID=UPI0000164A61
          Length = 694

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEK----CRFQQTVCLI-VYGDDNLISVAPSCASWFNGEAIR 166
           SV N+  + +A+RK+  + +      R  ++ C   VYGDDN++S +      +N   I 
Sbjct: 354 SVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDDNVVSFSLQVKDMYNLVTIA 413

Query: 167 VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
             L    V ++DG  K    ++   F ELDFLKR+++         PL  +AI   L+W+
Sbjct: 414 AELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSGQGFLCPLHKSAIEERLFWV 472

Query: 347 TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-NDSKEFQRVR 496
             S+D                 +E L  N   ALME + H  D   F R R
Sbjct: 473 RSSEDS----------------VETLDDNCYSALMEAFHHGRDYFNFLRAR 507

[89][TOP]
>UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO
          Length = 1915

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 6/171 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKPEK----CRFQQTVCLI-VYGDDNLISVAPSCASWFNGEAIR 166
            SV N+  + +A+RK+  + +      R  ++ C   VYGDDN++S +      +N   I 
Sbjct: 1575 SVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHCTFSVYGDDNVVSFSLQVKDMYNLVTIA 1634

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWL 346
              L    V ++DG  K    ++   F ELDFLKR+++         PL  +AI   L+W+
Sbjct: 1635 AELKTIGVNLSDGK-KTGNLVKWMEFSELDFLKRRWVLYSGQGFLCPLHKSAIEERLFWV 1693

Query: 347  TPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH-NDSKEFQRVR 496
              S+D                 +E L  N   ALME + H  D   F R R
Sbjct: 1694 RSSEDS----------------VETLDDNCYSALMEAFHHGRDYFNFLRAR 1728

[90][TOP]
>UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus
            RepID=A0N0G3_9VIRU
          Length = 1943

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKLAPKP---------EKCRFQQTVCLIVYGDDNLISVAPSCASWFNG 154
            S+ NE  +RYA+  L  +P         +   F Q + + VYGDDNL++V P    W++ 
Sbjct: 1248 SLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFNQ-LFIAVYGDDNLVAV-PLHLQWYSL 1305

Query: 155  EAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIF 328
              I   L    V I +G DK  D   ++ +   EL FL R F +   G   APL   +I 
Sbjct: 1306 PNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSELTFLSRGFKRHALGYHMAPLKWVSII 1365

Query: 329  SSLYWLTPS---------KDKFHTHQKASQYSGEVDVIEELVLNVNVALME 454
              +YW+ P+          +   T  + + + G V   ++LV +V  AL E
Sbjct: 1366 EPMYWIRPAPGCPDTQAMMENVETGIREAFHHGRV-AYDKLVSDVQTALDE 1415

[91][TOP]
>UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling
           virus RepID=Q9YZ97_SDV
          Length = 872

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
           S+ NE  +++++  L      A +     F +   + +YGDDN +SVA   AS +N + I
Sbjct: 546 SIVNEFYLKWSWMGLMKEAGYAKEASLYAFHEATEISLYGDDNFVSVATPVASLYNLKTI 605

Query: 164 RVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTGVIQAPLDMTAIFSSLYW 343
              L    VK+ DG+ K   T    P  E+DFLKR+F+        A    TAI      
Sbjct: 606 SEFLRRIGVKLGDGA-KTGITKPFIPLEEVDFLKRQFV--------ADAGSTAI------ 650

Query: 344 LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEFQR 490
           L P K K    ++     G  D +  L LN+  AL E + H   KE+ R
Sbjct: 651 LCPLK-KISIEERLFYVKGGQDELAALELNMATALCEAFFH--GKEYFR 696

[92][TOP]
>UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO
          Length = 2163

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL----APKPEKCRFQQTVCLI-VYGDDNLISVAPSCASWFNGEAIR 166
            S+ N+  + +A+RK+    +P     R  +T C   VYGDDN++S + +    +N   I 
Sbjct: 1636 SMVNQFYLMWAWRKIMSRISPSMVTYRVMRTHCTFSVYGDDNVVSFSLAVRDMYNLCTIA 1695

Query: 167  VTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDTG-VIQAPLDMTAIFSSLYW 343
              L    V ++DG  K    I+   F +LDFLKR++ +L+ G   + PLD  AI   L+W
Sbjct: 1696 DELKTIGVTLSDGK-KTGVLIKWTGFKDLDFLKRRW-ELEPGHGFKCPLDKMAIEERLFW 1753

Query: 344  LTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 466
            +  S+D                 +E L  N   ALME + H
Sbjct: 1754 VRKSEDN----------------MESLDDNCYSALMEAFHH 1778

[93][TOP]
>UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus
           RepID=UPI0000164A59
          Length = 682

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
           SV NE  +++++  L      A +     F +   + +YGDDN +SVA   AS +N   I
Sbjct: 357 SVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVSVATPVASVYNLTTI 416

Query: 164 RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTG--VIQAPLDMTAIFSS 334
              L    VK+ DG+     TI+P  P  E+DFLKR+F+  D+G   I  PL   +I   
Sbjct: 417 SNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDFLKRQFV-ADSGSTAILCPLKKISIEER 473

Query: 335 LYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 466
           L+++                 G  D I  L LN+  AL E + H
Sbjct: 474 LFYV----------------RGGQDEIAALELNIATALCEAFFH 501

[94][TOP]
>UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV
          Length = 2081

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
 Frame = +2

Query: 2    SVFNEILIRYAYRKL------APKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAI 163
            SV NE  +++++  L      A +     F +   + +YGDDN +SVA   AS +N   I
Sbjct: 1756 SVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVSVATPVASVYNLTTI 1815

Query: 164  RVTLAEKKVKITDGSDKDAPTIEP-KPFWELDFLKRKFLKLDTG--VIQAPLDMTAIFSS 334
               L    VK+ DG+     TI+P  P  E+DFLKR+F+  D+G   I  PL   +I   
Sbjct: 1816 SNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDFLKRQFV-ADSGSTAILCPLKKISIEER 1872

Query: 335  LYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLH 466
            L+++                 G  D I  L LN+  AL E + H
Sbjct: 1873 LFYV----------------RGGQDEIAALELNIATALCEAFFH 1900

[95][TOP]
>UniRef100_B3F388 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F388_9VIRU
          Length = 139

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAE 181
           S+ N + +RYAY  L PK E   F++ V L+ YGDDN++SV+P+ A W+N  AI    A 
Sbjct: 70  SLVNSLYMRYAYCLLNPKHEVSSFKENVSLMTYGDDNIMSVSPT-APWYNHTAIAAAFAT 128

Query: 182 KKVKIT 199
             +  T
Sbjct: 129 MDITYT 134

[96][TOP]
>UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus
           RepID=Q20LA1_9SECO
          Length = 533

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = +2

Query: 2   SVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS 133
           S+FNEIL+R AYR L P+ E+  F   V LIVYGDDN++ + P+
Sbjct: 488 SIFNEILVRCAYRSLVPEIERPFFSNNVALIVYGDDNVMGIHPN 531