BB909769 ( RCE08634 )

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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  216 bits (551), Expect = 8e-55
 Identities = 103/177 (58%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
 Frame = +3

Query: 54  IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 233
           IQ+   +TANFG  GA+FW++PLS+P AP+ VE+KFEFYIRI GID  PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343

Query: 234 FGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 410
           FGWFM+ P + T  E    +PSR+ N+ +K   C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403

Query: 411 WAWKHNIEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFGSFAGPV 575
           W+W  N EA K    +S         + H     R   +YDN+YSIPFEFGSFAGPV
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFGSFAGPV 460

[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  214 bits (544), Expect = 5e-54
 Identities = 104/195 (53%), Positives = 134/195 (68%), Gaps = 5/195 (2%)
 Frame = +3

Query: 6   QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
           QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+YI+I G
Sbjct: 270 QMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILG 329

Query: 186 IDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 356
           ID+ P +C+QINY QRF WF +++P      K  ++ +PSRV N+  K    TN+VNAFA
Sbjct: 330 IDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFA 389

Query: 357 IMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDN 530
           IMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  HHGE  +     +
Sbjct: 390 IMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSS 449

Query: 531 SYSIPFEFGSFAGPV 575
           S ++PFEFGSFAGPV
Sbjct: 450 SLAVPFEFGSFAGPV 464

[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  214 bits (544), Expect = 5e-54
 Identities = 104/195 (53%), Positives = 134/195 (68%), Gaps = 5/195 (2%)
 Frame = +3

Query: 6    QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
            QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+YI+I G
Sbjct: 1080 QMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILG 1139

Query: 186  IDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 356
            ID+ P +C+QINY QRF WF +++P      K  ++ +PSRV N+  K    TN+VNAFA
Sbjct: 1140 IDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFA 1199

Query: 357  IMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDN 530
            IMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  HHGE  +     +
Sbjct: 1200 IMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSS 1259

Query: 531  SYSIPFEFGSFAGPV 575
            S ++PFEFGSFAGPV
Sbjct: 1260 SLAVPFEFGSFAGPV 1274

[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  205 bits (521), Expect = 2e-51
 Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6   QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
           QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+YI+I G
Sbjct: 269 QMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKG 328

Query: 186 IDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
           I++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V  TNFVNA AI
Sbjct: 329 IEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAI 388

Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
           +CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T  ++   N++S
Sbjct: 389 LCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHS 447

Query: 540 IPFEFGSFAGPV 575
           +PF+FGSFAGP+
Sbjct: 448 VPFQFGSFAGPI 459

[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  205 bits (521), Expect = 2e-51
 Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6    QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
            QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+YI+I G
Sbjct: 1106 QMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKG 1165

Query: 186  IDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
            I++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V  TNFVNA AI
Sbjct: 1166 IEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAI 1225

Query: 360  MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
            +CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T  ++   N++S
Sbjct: 1226 LCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHS 1284

Query: 540  IPFEFGSFAGPV 575
            +PF+FGSFAGP+
Sbjct: 1285 VPFQFGSFAGPI 1296

[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  192 bits (487), Expect = 2e-47
 Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
 Frame = +3

Query: 6    QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
            Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI IHG
Sbjct: 1102 QIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHG 1161

Query: 186  IDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
            I+++  LC++INY Q F WFM++     T     + +P+R++NL  K V  TNFVNA AI
Sbjct: 1162 INAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNALAI 1221

Query: 360  MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNS 533
            MCATTGMH+GKC +HF+W W +  + +   G +S  TGMG   V  H G    F     S
Sbjct: 1222 MCATTGMHFGKCTLHFSWGW-YRGKLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYPATS 1280

Query: 534  YSIPFEFGSFAGPV 575
            +S+PF+FGSFAGP+
Sbjct: 1281 FSLPFQFGSFAGPI 1294

[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  188 bits (477), Expect = 3e-46
 Identities = 90/194 (46%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
 Frame = +3

Query: 6   QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
           Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI IHG
Sbjct: 269 QIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHG 328

Query: 186 IDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
           I  + +LC++INY Q F WFM++     T     + +P+R++NL  K V  TNFVNA AI
Sbjct: 329 IKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAI 388

Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNS 533
           MCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H G    F+    +
Sbjct: 389 MCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATN 447

Query: 534 YSIPFEFGSFAGPV 575
           +S+PF+FGSFAGP+
Sbjct: 448 FSLPFQFGSFAGPI 461

[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  188 bits (477), Expect = 3e-46
 Identities = 90/194 (46%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
 Frame = +3

Query: 6    QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
            Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI IHG
Sbjct: 1101 QIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHG 1160

Query: 186  IDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
            I  + +LC++INY Q F WFM++     T     + +P+R++NL  K V  TNFVNA AI
Sbjct: 1161 IKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAI 1220

Query: 360  MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNS 533
            MCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H G    F+    +
Sbjct: 1221 MCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATN 1279

Query: 534  YSIPFEFGSFAGPV 575
            +S+PF+FGSFAGP+
Sbjct: 1280 FSLPFQFGSFAGPI 1293

[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  178 bits (452), Expect = 2e-43
 Identities = 93/192 (48%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6   QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
           QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+YI+I G
Sbjct: 94  QMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILG 153

Query: 186 IDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 362
           I++   LC+ INYKQ FGWF +V+   T+KE  + +PSR++N+  K  +  N VNAF+IM
Sbjct: 154 IEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIM 213

Query: 363 CATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
           CATTGM WG    +H      H  +A   K   S   G+ T+  H G+ ++  +   S  
Sbjct: 214 CATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQV 268

Query: 540 IPFEFGSFAGPV 575
           IPFE GSFAGPV
Sbjct: 269 IPFEIGSFAGPV 280

[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  178 bits (452), Expect = 2e-43
 Identities = 93/192 (48%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6    QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
            QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+YI+I G
Sbjct: 1114 QMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILG 1173

Query: 186  IDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 362
            I++   LC+ INYKQ FGWF +V+   T+KE  + +PSR++N+  K  +  N VNAF+IM
Sbjct: 1174 IEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIM 1233

Query: 363  CATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
            CATTGM WG    +H      H  +A   K   S   G+ T+  H G+ ++  +   S  
Sbjct: 1234 CATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQV 1288

Query: 540  IPFEFGSFAGPV 575
            IPFE GSFAGPV
Sbjct: 1289 IPFEIGSFAGPV 1300

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  121 bits (303), Expect = 4e-26
 Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
 Frame = +3

Query: 15  HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 194
           H D   G + +L I+  FY+++ +G  GA   +  L SPM+P  +++ F+   +I G   
Sbjct: 284 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTP 343

Query: 195 QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 374
              +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 344 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 403

Query: 375 GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 548
            MH+G  I+HF+W  +     A+   G ++   G G ++ +  G  R FSIY+   ++P 
Sbjct: 404 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPL 463

Query: 549 EFGSFAGP 572
           E G+FAGP
Sbjct: 464 ELGTFAGP 471

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  119 bits (298), Expect = 2e-25
 Identities = 61/188 (32%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
 Frame = +3

Query: 15  HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 194
           H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G   
Sbjct: 272 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 331

Query: 195 QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 374
              +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 332 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 391

Query: 375 GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 548
            MH+G  I+HF+W  +     A+   G ++   G G ++ +  G  R  SIY+   ++P 
Sbjct: 392 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 451

Query: 549 EFGSFAGP 572
           E G+FAGP
Sbjct: 452 ELGTFAGP 459

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  119 bits (298), Expect = 2e-25
 Identities = 61/188 (32%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
 Frame = +3

Query: 15   HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 194
            H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G   
Sbjct: 955  HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 1014

Query: 195  QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 374
               +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 1015 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 1074

Query: 375  GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 548
             MH+G  I+HF+W  +     A+   G ++   G G ++ +  G  R  SIY+   ++P 
Sbjct: 1075 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 1134

Query: 549  EFGSFAGP 572
            E G+FAGP
Sbjct: 1135 ELGTFAGP 1142

[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 5/191 (2%)
 Frame = +3

Query: 12  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
           PH  +   G  E+ I++ F+S A       +  ++PLS P+AP+     +EF + I+   
Sbjct: 282 PHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWR 341

Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401

Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
           + A TG H+G+  V    +W  + +A   +G++S  T       +  G+ R++ +     
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459

Query: 537 SIPFEFGSFAG 569
            IP   GS+AG
Sbjct: 460 EIPIFLGSYAG 470

[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
 Frame = +3

Query: 12  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
           PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I+   
Sbjct: 282 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWR 341

Query: 186 IDSQPDLCKQINYKQRFGWFM---VKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 356
            DSQ       +  + + WF    +KP+         +P  + +   K    T   N  +
Sbjct: 342 PDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLS 400

Query: 357 IMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNS 533
            + A TG H+G+  V    +W  + +A   +G++S  T       +  G+ R++ +    
Sbjct: 401 WLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTE 458

Query: 534 YSIPFEFGSFAG 569
             IP   GS+AG
Sbjct: 459 AEIPIFLGSYAG 470

[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
 Frame = +3

Query: 12  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
           PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I    
Sbjct: 282 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 341

Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401

Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
           + A TG H+G+  V    +W  + +A   +G++S  T       +  G+ R++ +     
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459

Query: 537 SIPFEFGSFAG 569
            IP   GS+AG
Sbjct: 460 EIPIFLGSYAG 470

[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
 Frame = +3

Query: 12  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
           PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I    
Sbjct: 280 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 339

Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 340 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 399

Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
           + A TG H+G+  V    +W  + +A   +G++S  T       +  G+ R++ +     
Sbjct: 400 LVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 457

Query: 537 SIPFEFGSFAG 569
            IP   GS+AG
Sbjct: 458 EIPIFLGSYAG 468

[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
 Frame = +3

Query: 12   PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
            PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I    
Sbjct: 868  PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 927

Query: 186  IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
             DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 928  PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 987

Query: 360  MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
            + A TG H+G+  V    +W  + +A   +G++S  T       +  G+ R++ +     
Sbjct: 988  LVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 1045

Query: 537  SIPFEFGSFAG 569
             IP   GS+AG
Sbjct: 1046 EIPIFLGSYAG 1056

[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
 Frame = +3

Query: 12  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
           PH  +   G  E+  ++  +S++       +  ++PLS P+AP+     +EF + I    
Sbjct: 282 PHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 341

Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401

Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
           + A TG H+G+  V    +W  + +A   +G++S  T       +  G+ R++ +     
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459

Query: 537 SIPFEFGSFAG 569
            IP   GS+AG
Sbjct: 460 EIPIFLGSYAG 470

[20][TOP]
>UniRef100_Q9QRA5 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
           RepID=Q9QRA5_9SECO
          Length = 562

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
 Frame = +3

Query: 6   QMPHCDIVEG-GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 182
           Q PH  + +G G+  L I +PF + A+F  +  +  +  ++ P +P   ++KF F     
Sbjct: 278 QRPHFILKDGQGAFSLPISTPF-AAASFLEDMLRLEIFAIAGPFSPRDNKAKFHFMCYFD 336

Query: 183 GIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 362
            I+    + + I  +Q F W + +    D +++   P+R+ +++    D     +  +++
Sbjct: 337 HIELDEQVPRTIAGEQLFNWCVFQNFKID-DWRYEWPARLPDILDDKSDVLLRQHPLSLL 395

Query: 363 CATTGMHWGKCIVHFTWAWKHNIEASKMKGNLS--FGTGMGTKDVHHGETRVFSIYDNSY 536
            ++TG   G+    F + W  N  A  MKG+ S     G G +++    T    +     
Sbjct: 396 ISSTGFFTGR--ASFVFQWGLNANAGNMKGSFSARLAFGKGVEEIEQTSTVHPLVGACEA 453

Query: 537 SIPFEFGSFAG 569
            IP EF +F G
Sbjct: 454 RIPVEFKTFTG 464