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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 216 bits (551), Expect = 8e-55
Identities = 103/177 (58%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Frame = +3
Query: 54 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 233
IQ+ +TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343
Query: 234 FGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 410
FGWFM+ P + T E +PSR+ N+ +K C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403
Query: 411 WAWKHNIEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFGSFAGPV 575
W+W N EA K +S + H R +YDN+YSIPFEFGSFAGPV
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFGSFAGPV 460
[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 214 bits (544), Expect = 5e-54
Identities = 104/195 (53%), Positives = 134/195 (68%), Gaps = 5/195 (2%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I G
Sbjct: 270 QMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILG 329
Query: 186 IDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 356
ID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+VNAFA
Sbjct: 330 IDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFA 389
Query: 357 IMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDN 530
IMCATTGMH GKCI+HF+W ++G++SF +GMG + HHGE + +
Sbjct: 390 IMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSS 449
Query: 531 SYSIPFEFGSFAGPV 575
S ++PFEFGSFAGPV
Sbjct: 450 SLAVPFEFGSFAGPV 464
[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 214 bits (544), Expect = 5e-54
Identities = 104/195 (53%), Positives = 134/195 (68%), Gaps = 5/195 (2%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I G
Sbjct: 1080 QMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILG 1139
Query: 186 IDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 356
ID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+VNAFA
Sbjct: 1140 IDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFA 1199
Query: 357 IMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDN 530
IMCATTGMH GKCI+HF+W ++G++SF +GMG + HHGE + +
Sbjct: 1200 IMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSS 1259
Query: 531 SYSIPFEFGSFAGPV 575
S ++PFEFGSFAGPV
Sbjct: 1260 SLAVPFEFGSFAGPV 1274
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 205 bits (521), Expect = 2e-51
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I G
Sbjct: 269 QMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKG 328
Query: 186 IDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
I++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TNFVNA AI
Sbjct: 329 IEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAI 388
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
+CATTGMH G C +HF+W W H E K G L F GMG + H G+T ++ N++S
Sbjct: 389 LCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHS 447
Query: 540 IPFEFGSFAGPV 575
+PF+FGSFAGP+
Sbjct: 448 VPFQFGSFAGPI 459
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 205 bits (521), Expect = 2e-51
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I G
Sbjct: 1106 QMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKG 1165
Query: 186 IDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
I++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TNFVNA AI
Sbjct: 1166 IEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAI 1225
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
+CATTGMH G C +HF+W W H E K G L F GMG + H G+T ++ N++S
Sbjct: 1226 LCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHS 1284
Query: 540 IPFEFGSFAGPV 575
+PF+FGSFAGP+
Sbjct: 1285 VPFQFGSFAGPI 1296
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 192 bits (487), Expect = 2e-47
Identities = 91/194 (46%), Positives = 128/194 (65%), Gaps = 4/194 (2%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHG
Sbjct: 1102 QIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHG 1161
Query: 186 IDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
I+++ LC++INY Q F WFM++ T + +P+R++NL K V TNFVNA AI
Sbjct: 1162 INAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNALAI 1221
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNS 533
MCATTGMH+GKC +HF+W W + + + G +S TGMG V H G F S
Sbjct: 1222 MCATTGMHFGKCTLHFSWGW-YRGKLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYPATS 1280
Query: 534 YSIPFEFGSFAGPV 575
+S+PF+FGSFAGP+
Sbjct: 1281 FSLPFQFGSFAGPI 1294
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 188 bits (477), Expect = 3e-46
Identities = 90/194 (46%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHG
Sbjct: 269 QIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHG 328
Query: 186 IDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
I + +LC++INY Q F WFM++ T + +P+R++NL K V TNFVNA AI
Sbjct: 329 IKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAI 388
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNS 533
MCATTGMH+GKC +HF+W W + + G S TGMG V H G F+ +
Sbjct: 389 MCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATN 447
Query: 534 YSIPFEFGSFAGPV 575
+S+PF+FGSFAGP+
Sbjct: 448 FSLPFQFGSFAGPI 461
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 188 bits (477), Expect = 3e-46
Identities = 90/194 (46%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHG
Sbjct: 1101 QIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHG 1160
Query: 186 IDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
I + +LC++INY Q F WFM++ T + +P+R++NL K V TNFVNA AI
Sbjct: 1161 IKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAI 1220
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNS 533
MCATTGMH+GKC +HF+W W + + G S TGMG V H G F+ +
Sbjct: 1221 MCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATN 1279
Query: 534 YSIPFEFGSFAGPV 575
+S+PF+FGSFAGP+
Sbjct: 1280 FSLPFQFGSFAGPI 1293
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 178 bits (452), Expect = 2e-43
Identities = 93/192 (48%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I G
Sbjct: 94 QMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILG 153
Query: 186 IDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 362
I++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K + N VNAF+IM
Sbjct: 154 IEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIM 213
Query: 363 CATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
CATTGM WG +H H +A K S G+ T+ H G+ ++ + S
Sbjct: 214 CATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQV 268
Query: 540 IPFEFGSFAGPV 575
IPFE GSFAGPV
Sbjct: 269 IPFEIGSFAGPV 280
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 178 bits (452), Expect = 2e-43
Identities = 93/192 (48%), Positives = 122/192 (63%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 QMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHG 185
QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I G
Sbjct: 1114 QMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILG 1173
Query: 186 IDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 362
I++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K + N VNAF+IM
Sbjct: 1174 IEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIM 1233
Query: 363 CATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYS 539
CATTGM WG +H H +A K S G+ T+ H G+ ++ + S
Sbjct: 1234 CATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQV 1288
Query: 540 IPFEFGSFAGPV 575
IPFE GSFAGPV
Sbjct: 1289 IPFEIGSFAGPV 1300
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 121 bits (303), Expect = 4e-26
Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +3
Query: 15 HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 194
H D G + +L I+ FY+++ +G GA + L SPM+P +++ F+ +I G
Sbjct: 284 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTP 343
Query: 195 QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 374
+C+ IN+ QRFGWF V+P + ++ + ++L + + T + NAF MC T+
Sbjct: 344 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 403
Query: 375 GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 548
MH+G I+HF+W + A+ G ++ G G ++ + G R FSIY+ ++P
Sbjct: 404 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPL 463
Query: 549 EFGSFAGP 572
E G+FAGP
Sbjct: 464 ELGTFAGP 471
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 119 bits (298), Expect = 2e-25
Identities = 61/188 (32%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Frame = +3
Query: 15 HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 194
H D G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G
Sbjct: 272 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 331
Query: 195 QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 374
+C+ IN+ QRFGWF V+P + ++ + ++L + + T + NAF MC T+
Sbjct: 332 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 391
Query: 375 GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 548
MH+G I+HF+W + A+ G ++ G G ++ + G R SIY+ ++P
Sbjct: 392 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 451
Query: 549 EFGSFAGP 572
E G+FAGP
Sbjct: 452 ELGTFAGP 459
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 119 bits (298), Expect = 2e-25
Identities = 61/188 (32%), Positives = 102/188 (54%), Gaps = 2/188 (1%)
Frame = +3
Query: 15 HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 194
H D G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G
Sbjct: 955 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 1014
Query: 195 QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 374
+C+ IN+ QRFGWF V+P + ++ + ++L + + T + NAF MC T+
Sbjct: 1015 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 1074
Query: 375 GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPF 548
MH+G I+HF+W + A+ G ++ G G ++ + G R SIY+ ++P
Sbjct: 1075 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 1134
Query: 549 EFGSFAGP 572
E G+FAGP
Sbjct: 1135 ELGTFAGP 1142
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 64.3 bits (155), Expect = 6e-09
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 5/191 (2%)
Frame = +3
Query: 12 PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
PH + G E+ I++ F+S A + ++PLS P+AP+ +EF + I+
Sbjct: 282 PHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWR 341
Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
DSQ P + F +KP+ +P + + K T N +
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
+ A TG H+G+ V +W + +A +G++S T + G+ R++ +
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459
Query: 537 SIPFEFGSFAG 569
IP GS+AG
Sbjct: 460 EIPIFLGSYAG 470
[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 62.4 bits (150), Expect = 2e-08
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Frame = +3
Query: 12 PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
PH + G E+ I++ +S A + ++PLS P+AP+ +EF + I+
Sbjct: 282 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWR 341
Query: 186 IDSQPDLCKQINYKQRFGWFM---VKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 356
DSQ + + + WF +KP+ +P + + K T N +
Sbjct: 342 PDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLS 400
Query: 357 IMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNS 533
+ A TG H+G+ V +W + +A +G++S T + G+ R++ +
Sbjct: 401 WLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTE 458
Query: 534 YSIPFEFGSFAG 569
IP GS+AG
Sbjct: 459 AEIPIFLGSYAG 470
[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 61.2 bits (147), Expect = 5e-08
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
Frame = +3
Query: 12 PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
PH + G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 282 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 341
Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
DSQ P + F +KP+ +P + + K T N +
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
+ A TG H+G+ V +W + +A +G++S T + G+ R++ +
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459
Query: 537 SIPFEFGSFAG 569
IP GS+AG
Sbjct: 460 EIPIFLGSYAG 470
[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 60.8 bits (146), Expect = 7e-08
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
Frame = +3
Query: 12 PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
PH + G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 280 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 339
Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
DSQ P + F +KP+ +P + + K T N +
Sbjct: 340 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 399
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
+ A TG H+G+ V +W + +A +G++S T + G+ R++ +
Sbjct: 400 LVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 457
Query: 537 SIPFEFGSFAG 569
IP GS+AG
Sbjct: 458 EIPIFLGSYAG 468
[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 60.8 bits (146), Expect = 7e-08
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
Frame = +3
Query: 12 PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
PH + G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 868 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 927
Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
DSQ P + F +KP+ +P + + K T N +
Sbjct: 928 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 987
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
+ A TG H+G+ V +W + +A +G++S T + G+ R++ +
Sbjct: 988 LVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 1045
Query: 537 SIPFEFGSFAG 569
IP GS+AG
Sbjct: 1046 EIPIFLGSYAG 1056
[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 58.5 bits (140), Expect = 3e-07
Identities = 44/191 (23%), Positives = 80/191 (41%), Gaps = 5/191 (2%)
Frame = +3
Query: 12 PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 185
PH + G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 282 PHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 341
Query: 186 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 359
DSQ P + F +KP+ +P + + K T N +
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401
Query: 360 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSY 536
+ A TG H+G+ V +W + +A +G++S T + G+ R++ +
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459
Query: 537 SIPFEFGSFAG 569
IP GS+AG
Sbjct: 460 EIPIFLGSYAG 470
[20][TOP]
>UniRef100_Q9QRA5 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA5_9SECO
Length = 562
Score = 54.7 bits (130), Expect = 5e-06
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Frame = +3
Query: 6 QMPHCDIVEG-GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 182
Q PH + +G G+ L I +PF + A+F + + + ++ P +P ++KF F
Sbjct: 278 QRPHFILKDGQGAFSLPISTPF-AAASFLEDMLRLEIFAIAGPFSPRDNKAKFHFMCYFD 336
Query: 183 GIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 362
I+ + + I +Q F W + + D +++ P+R+ +++ D + +++
Sbjct: 337 HIELDEQVPRTIAGEQLFNWCVFQNFKID-DWRYEWPARLPDILDDKSDVLLRQHPLSLL 395
Query: 363 CATTGMHWGKCIVHFTWAWKHNIEASKMKGNLS--FGTGMGTKDVHHGETRVFSIYDNSY 536
++TG G+ F + W N A MKG+ S G G +++ T +
Sbjct: 396 ISSTGFFTGR--ASFVFQWGLNANAGNMKGSFSARLAFGKGVEEIEQTSTVHPLVGACEA 453
Query: 537 SIPFEFGSFAG 569
IP EF +F G
Sbjct: 454 RIPVEFKTFTG 464