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[1][TOP] >UniRef100_UPI0001983099 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983099 Length = 1183 Score = 306 bits (784), Expect = 7e-82 Identities = 150/191 (78%), Positives = 161/191 (84%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FSEVTDYSFTADMETELDNVSAGLT+WKGLL DYWTRF YC R SNVHIHQVEKMLEKK Sbjct: 921 FSEVTDYSFTADMETELDNVSAGLTEWKGLLKDYWTRFSMYCNRVSNVHIHQVEKMLEKK 980 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 F D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CKYIAK L D DD+ Sbjct: 981 FGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKML---DGDDD 1037 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E+ Q+ T EEPK LG + GS+EKILLK+GPYG Y+QLGEDRKGY PKRASV H DV Sbjct: 1038 EEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSH--DVG 1095 Query: 542 SITLEDALVLL 574 SITLEDAL LL Sbjct: 1096 SITLEDALELL 1106 [2][TOP] >UniRef100_B9N6D9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N6D9_POPTR Length = 254 Score = 280 bits (717), Expect = 4e-74 Identities = 135/179 (75%), Positives = 154/179 (86%) Frame = +2 Query: 38 METELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKKFADYLFGSLPDK 217 METELDNVSAGLT WKGLL DYWTRF+ YC RT +VHIHQVEKMLE+ + +LFGSLPDK Sbjct: 1 METELDNVSAGLTDWKGLLKDYWTRFQLYCSRTESVHIHQVEKMLERTYDRFLFGSLPDK 60 Query: 218 SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEE 397 SR CPSC EGTLIFKVSRFGAGYFIGCDQHP CKYIAKTLY DD++E+TP Q+++++E Sbjct: 61 SRTCPSCMEGTLIFKVSRFGAGYFIGCDQHPNCKYIAKTLYG--DDEKEETP-QSSSVDE 117 Query: 398 PKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLL 574 PKLLG + SNEK+LLK+GPYG YVQLGEDRKGY PKR+SV H+KDV +IT E AL LL Sbjct: 118 PKLLGVHPTSNEKVLLKNGPYGYYVQLGEDRKGYAPKRSSVSHIKDVGAITHEVALNLL 176 [3][TOP] >UniRef100_UPI000034F143 DNA topoisomerase family protein n=1 Tax=Arabidopsis thaliana RepID=UPI000034F143 Length = 1280 Score = 275 bits (704), Expect = 1e-72 Identities = 132/191 (69%), Positives = 153/191 (80%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+E+TDYSFTADMETELDNVS G+T+WKGLL DYWTRF +YC+R NV QVEKMLEKK Sbjct: 1010 FTEITDYSFTADMETELDNVSGGVTEWKGLLRDYWTRFSAYCKRVENVQRSQVEKMLEKK 1069 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 + D LF LP SR CPSC EGTL FK S+FGAGYFIGCDQHP CK+IAKTLY D+D Sbjct: 1070 YEDVLFSLLPYPSRTCPSCMEGTLSFKASKFGAGYFIGCDQHPSCKFIAKTLYGEDED-- 1127 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 ED P +N +EEPKLLG + ++EK++LK GPYG YVQLGED+KG+TPKRA+ H DV+ Sbjct: 1128 EDDPPKNNCVEEPKLLGLHPNTSEKVILKCGPYGHYVQLGEDKKGHTPKRANAAH--DVN 1185 Query: 542 SITLEDALVLL 574 SITLE AL LL Sbjct: 1186 SITLESALELL 1196 [4][TOP] >UniRef100_B9SPT5 DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9SPT5_RICCO Length = 1071 Score = 253 bits (646), Expect = 7e-66 Identities = 129/191 (67%), Positives = 146/191 (76%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+EVTDYSFTADMETELDNVSAGLT+WKGLL DYWTRF SYC +VHIHQVEKMLEK Sbjct: 826 FTEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFSSYCSHAESVHIHQVEKMLEKT 885 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 F D+LFGSLPD SR CPSC EGTLIFK Y + +Y DD++ Sbjct: 886 FGDFLFGSLPDDSRTCPSCLEGTLIFK-------YML-------------DIYG--DDED 923 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E+TP QN ++EEPKLLG + S EK+LLK+GPYG Y+QLGEDRKGYTPKRASV H+KDVD Sbjct: 924 EETP-QNNSVEEPKLLGVHPVSTEKVLLKNGPYGFYLQLGEDRKGYTPKRASVSHIKDVD 982 Query: 542 SITLEDALVLL 574 +ITLEDAL LL Sbjct: 983 NITLEDALELL 993 [5][TOP] >UniRef100_B8B0L5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8B0L5_ORYSI Length = 301 Score = 248 bits (633), Expect = 2e-64 Identities = 119/191 (62%), Positives = 145/191 (75%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FSEV D SFTA+METELDNVSAG T+WKGLL D+W RF YC S + + +VE+MLE+K Sbjct: 34 FSEVADLSFTANMETELDNVSAGSTEWKGLLKDFWERFNKYCGDASRLDVRKVERMLEEK 93 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 F LF L + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDDE Sbjct: 94 FGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDDE 151 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 + + P+LLG S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+D Sbjct: 152 TEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDID 211 Query: 542 SITLEDALVLL 574 SITL+DA+ LL Sbjct: 212 SITLKDAIELL 222 [6][TOP] >UniRef100_C5Z4V5 DNA topoisomerase (Fragment) n=1 Tax=Sorghum bicolor RepID=C5Z4V5_SORBI Length = 1094 Score = 242 bits (618), Expect = 1e-62 Identities = 117/193 (60%), Positives = 146/193 (75%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FSEV DYSFTA+METELDNVSAG T+WKGLL DYW RF YC S + +VE+MLE+K Sbjct: 851 FSEVADYSFTANMETELDNVSAGSTEWKGLLKDYWERFNKYCADASKLDGRKVERMLEEK 910 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 F LF + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP+CKYIA++L +D+ E Sbjct: 911 FGPILFPDVDKDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARSLSQQEDETE 970 Query: 362 --EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E++P+ T P+LLG S++K+ LK GPYG YVQ+GED+KG PKRAS+ VKD Sbjct: 971 PTEESPKSFT----PRLLGVMPDSDQKVFLKQGPYGYYVQIGEDKKGLFPKRASLSEVKD 1026 Query: 536 VDSITLEDALVLL 574 +DS+TLEDA+ LL Sbjct: 1027 IDSVTLEDAIELL 1039 [7][TOP] >UniRef100_A3BAP2 DNA topoisomerase n=1 Tax=Oryza sativa Japonica Group RepID=A3BAP2_ORYSJ Length = 1180 Score = 237 bits (605), Expect = 4e-61 Identities = 119/208 (57%), Positives = 145/208 (69%), Gaps = 17/208 (8%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEK----- 166 FSEV D SFTA+METELDNVSAG T+WKGLL D+W RF YC S + + +VE+ Sbjct: 896 FSEVADLSFTANMETELDNVSAGSTEWKGLLKDFWERFNKYCGDASRLDVRKVERKSLLI 955 Query: 167 ------------MLEKKFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHP 310 MLE+KF LF L + SR+CPSC+EGTL FKVSR+G GYFIGCD+HP Sbjct: 956 SHKVQLPLKVERMLEEKFGSILFSDLDNDSRICPSCSEGTLRFKVSRYGEGYFIGCDRHP 1015 Query: 311 RCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR 490 +CKYIA+TL SDDDDE + + P+LLG S+EK+ LK GPYG YVQ+GEDR Sbjct: 1016 KCKYIARTL--SDDDDETEASDETQRTFTPRLLGALPDSDEKVFLKQGPYGHYVQVGEDR 1073 Query: 491 KGYTPKRASVPHVKDVDSITLEDALVLL 574 KG +PKRA + VKD+DSITL+DA+ LL Sbjct: 1074 KGVSPKRAPLSEVKDIDSITLKDAIELL 1101 [8][TOP] >UniRef100_C3SA84 DNA topoisomerase n=1 Tax=Brachypodium distachyon RepID=C3SA84_BRADI Length = 856 Score = 232 bits (592), Expect = 1e-59 Identities = 122/232 (52%), Positives = 146/232 (62%), Gaps = 41/232 (17%) Frame = +2 Query: 2 FSEVTDYSFTADMETE-----------------------------------------LDN 58 FSE+ DYSFTA+METE LDN Sbjct: 563 FSEIADYSFTANMETEYGFRNQLKLAVYCHGISRYEIPGNQQVGKLVPREVRQQWLELDN 622 Query: 59 VSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKKFADYLFGSLPDKSRVCPSC 238 VSAG T+WKGLL DYW RF YC S + +VE+MLE+KF LF L D SR+CPSC Sbjct: 623 VSAGSTEWKGLLKDYWERFSKYCGDASQWDVRKVERMLEEKFRPILFPDLDDASRICPSC 682 Query: 239 TEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFN 418 +EGTL FKVSRFG GYFIGCD+HP+CKYIA+TL SD+DDE + ++ EP+LLG Sbjct: 683 SEGTLRFKVSRFGEGYFIGCDRHPKCKYIARTL--SDEDDENEACEETKWNFEPRLLGVM 740 Query: 419 SGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLL 574 NEK+ LK GPYG Y+Q+GEDRKG + KRAS+ VK+VDSITLEDA+ LL Sbjct: 741 PNLNEKVFLKQGPYGYYIQVGEDRKGISQKRASLSEVKNVDSITLEDAIELL 792 [9][TOP] >UniRef100_B9EZZ0 DNA topoisomerase n=1 Tax=Oryza sativa Japonica Group RepID=B9EZZ0_ORYSJ Length = 962 Score = 229 bits (584), Expect = 1e-58 Identities = 112/191 (58%), Positives = 139/191 (72%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FSEV D SFTA++ETELDNVSAG T+WKGLL D+W RF YC S + + +VE+MLE+K Sbjct: 696 FSEVADLSFTANLETELDNVSAGSTEWKGLLKDFWERFNKYCGNASRLQVRKVERMLEEK 755 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 F LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+ E Sbjct: 756 FGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDETE 815 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+D Sbjct: 816 ASDEIQSTF--TPRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDID 873 Query: 542 SITLEDALVLL 574 SITLEDA+ LL Sbjct: 874 SITLEDAIELL 884 [10][TOP] >UniRef100_B8AHL0 DNA topoisomerase n=1 Tax=Oryza sativa Indica Group RepID=B8AHL0_ORYSI Length = 968 Score = 229 bits (584), Expect = 1e-58 Identities = 112/191 (58%), Positives = 139/191 (72%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FSEV D SFTA++ETELDNVSAG T+WKGLL D+W RF YC S + + +VE+MLE+K Sbjct: 702 FSEVADLSFTANLETELDNVSAGSTEWKGLLKDFWERFNKYCGNASRLQVRKVERMLEEK 761 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 F LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+ E Sbjct: 762 FGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDETE 821 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+D Sbjct: 822 ASDEIQSTF--TPRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDID 879 Query: 542 SITLEDALVLL 574 SITLEDA+ LL Sbjct: 880 SITLEDAIELL 890 [11][TOP] >UniRef100_B7F873 cDNA clone:J033143C09, full insert sequence n=1 Tax=Oryza sativa Japonica Group RepID=B7F873_ORYSJ Length = 286 Score = 229 bits (584), Expect = 1e-58 Identities = 112/191 (58%), Positives = 139/191 (72%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FSEV D SFTA++ETELDNVSAG T+WKGLL D+W RF YC S + + +VE+MLE+K Sbjct: 10 FSEVADLSFTANLETELDNVSAGSTEWKGLLKDFWERFNKYCGNASRLQVRKVERMLEEK 69 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 F LF L + SR+CPSC+EGTL KVS+ G GYFIGCD+HP+CKYIA+TL D+ E Sbjct: 70 FGSILFPDLDNDSRICPSCSEGTLRLKVSKHGEGYFIGCDRHPKCKYIARTLSVEVDETE 129 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 Q+T P+LLG S+EK+ LK GPYG Y+Q+GED KG + KRA + VKD+D Sbjct: 130 ASDEIQSTF--TPRLLGVLPDSDEKVFLKQGPYGHYIQVGEDIKGVSRKRAPLSEVKDID 187 Query: 542 SITLEDALVLL 574 SITLEDA+ LL Sbjct: 188 SITLEDAIELL 198 [12][TOP] >UniRef100_A7P530 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7P530_VITVI Length = 188 Score = 211 bits (538), Expect = 2e-53 Identities = 102/136 (75%), Positives = 113/136 (83%) Frame = +2 Query: 167 MLEKKFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 MLEKKF D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CKYIAK L Sbjct: 1 MLEKKFGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCKYIAKML--- 57 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPH 526 D DD+E+ Q+ T EEPK LG + GS+EKILLK+GPYG Y+QLGEDRKGY PKRASV H Sbjct: 58 DGDDDEEVASQDKTFEEPKALGLSPGSSEKILLKNGPYGFYLQLGEDRKGYLPKRASVSH 117 Query: 527 VKDVDSITLEDALVLL 574 +KDV SITLEDAL LL Sbjct: 118 IKDVGSITLEDALELL 133 [13][TOP] >UniRef100_A5AWM5 DNA topoisomerase n=1 Tax=Vitis vinifera RepID=A5AWM5_VITVI Length = 1039 Score = 202 bits (514), Expect = 1e-50 Identities = 92/106 (86%), Positives = 96/106 (90%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FSEVTDYSFTADMETELDNVSAGLT+WKGLL DYWTRF YC R SNVHIHQVEKMLEKK Sbjct: 934 FSEVTDYSFTADMETELDNVSAGLTEWKGLLKDYWTRFSMYCNRVSNVHIHQVEKMLEKK 993 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCK 319 F D+LF LPDKSR CPSC EGTLIFKVSRFG+GYFIGCDQHP+CK Sbjct: 994 FGDFLFSFLPDKSRTCPSCMEGTLIFKVSRFGSGYFIGCDQHPKCK 1039 [14][TOP] >UniRef100_O49571 DNA topoisomerase like-protein n=1 Tax=Arabidopsis thaliana RepID=O49571_ARATH Length = 1179 Score = 176 bits (447), Expect = 9e-43 Identities = 96/191 (50%), Positives = 120/191 (62%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+E+TDYSFTADMETELDNVS G+T+WKGLL DYWTRF +YC+R NV Q Sbjct: 950 FTEITDYSFTADMETELDNVSGGVTEWKGLLRDYWTRFSAYCKRVENVQRSQ-------- 1001 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 L+G + +F + K+IAKTLY D+D Sbjct: 1002 ----LYG-------------------RHLKF------------QSKFIAKTLYGEDED-- 1024 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 ED P +N +EEPKLLG + ++EK++LK GPYG YVQLGED+KG+TPKRA+ H+KDV+ Sbjct: 1025 EDDPPKNNCVEEPKLLGLHPNTSEKVILKCGPYGHYVQLGEDKKGHTPKRANAAHIKDVN 1084 Query: 542 SITLEDALVLL 574 SITLE AL LL Sbjct: 1085 SITLESALELL 1095 [15][TOP] >UniRef100_C7J3V1 Os06g0281400 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=C7J3V1_ORYSJ Length = 197 Score = 149 bits (376), Expect = 1e-34 Identities = 72/114 (63%), Positives = 88/114 (77%) Frame = +2 Query: 233 SCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLG 412 SC+EGTL FKVSR+G GYFIGCD+HP+CKYIA+TL SDDDDE + + P+LLG Sbjct: 7 SCSEGTLRFKVSRYGEGYFIGCDRHPKCKYIARTL--SDDDDETEASDETQRTFTPRLLG 64 Query: 413 FNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLL 574 S+EK+ LK GPYG YVQ+GEDRKG +PKRA + VKD+DSITL+DA+ LL Sbjct: 65 ALPDSDEKVFLKQGPYGHYVQVGEDRKGVSPKRAPLSEVKDIDSITLKDAIELL 118 [16][TOP] >UniRef100_A8TLB9 DNA topoisomerase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLB9_9PROT Length = 893 Score = 129 bits (323), Expect = 2e-28 Identities = 72/195 (36%), Positives = 109/195 (55%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ Y+FTAD+ET+LD+VSAG W+ +L D+W FK + T ++ I QV + L+++ Sbjct: 529 FTRYVAYNFTADLETQLDDVSAGQLDWRKVLRDFWQAFKGSVDGTKDLSITQVIEALDQE 588 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A + F + PD R CPSC G L ++ +FGA FIGC +P C++ T + Sbjct: 589 LATHFFANGPDGAPDRGCPSCDGGRLSLRLGKFGA--FIGCSNYPNCRF---TRQLGEAA 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPHV 529 + + PK+LG + + +++ L+ GPYG+YVQLGE +G PKRAS+P Sbjct: 644 GGKSNGADGEEMNLPKVLGTDPETGQEVSLRKGPYGVYVQLGEPPEGSKEKPKRASLPRQ 703 Query: 530 KDVDSITLEDALVLL 574 + L L LL Sbjct: 704 LPPADVDLPKGLSLL 718 [17][TOP] >UniRef100_Q68X45 DNA topoisomerase 1 n=1 Tax=Rickettsia typhi RepID=TOP1_RICTY Length = 779 Score = 128 bits (321), Expect = 4e-28 Identities = 74/191 (38%), Positives = 105/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F + E + I ++ L+K Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKTSLNNFWSGFNNNIESVNEQKITEIINYLQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S+VCPSC G L K+ +FGA F+ C +P C + K S +D+ Sbjct: 586 LDYHLFGE-NKESKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTF--KKSIVSGNDNN 640 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 ED +T + + K+LG + E I LK+GPYG Y+QLGE PKR VP Sbjct: 641 EDEGNLSTILNDNKILGTDKDGVE-IYLKTGPYGPYIQLGEQCGKVKPKRTPVPTNLKQS 699 Query: 542 SITLEDALVLL 574 ITLE AL LL Sbjct: 700 EITLEVALKLL 710 [18][TOP] >UniRef100_Q9ZDK2 DNA topoisomerase 1 n=1 Tax=Rickettsia prowazekii RepID=TOP1_RICPR Length = 776 Score = 127 bits (319), Expect = 6e-28 Identities = 74/191 (38%), Positives = 102/191 (53%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W F E + I ++ L+K Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKTALNNFWRGFNHNIESVNEQKITEIINYLQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S+VCPSC G L K+ +FGA F+ C +P C + K S +D+ Sbjct: 586 LDYHLFGE-DKESKVCPSCKTGQLSLKLGKFGA--FLACSNYPECTF--KKSIVSGNDNN 640 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 ED +T + + K+LG + E I LK GPYG Y+QLGE PKR VP Sbjct: 641 EDEGDPSTILNDNKILGTDQDGVE-IYLKKGPYGPYIQLGEQCGKVKPKRTPVPANLKQS 699 Query: 542 SITLEDALVLL 574 ITLE AL LL Sbjct: 700 EITLEIALKLL 710 [19][TOP] >UniRef100_C4YUC4 DNA topoisomerase n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YUC4_9RICK Length = 770 Score = 127 bits (318), Expect = 8e-28 Identities = 71/191 (37%), Positives = 105/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKAALSNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S+VCPSC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKVCPSCKTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P + E K+LG N E I LK GPYG Y+QLGE PKR+ VP + + Sbjct: 643 EGEP--SAIPNENKVLGTNKDGVE-IYLKKGPYGPYIQLGEQEGKVKPKRSPVPANLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [20][TOP] >UniRef100_Q2GG85 DNA topoisomerase n=1 Tax=Ehrlichia chaffeensis str. Arkansas RepID=Q2GG85_EHRCR Length = 820 Score = 126 bits (317), Expect = 1e-27 Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 1/192 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS +Y FTAD+E +LD +S G WK +L +W F + +V K++ + Sbjct: 525 FSRYVEYDFTADLEEKLDLISNGKINWKEVLHQFWFLFIDNVNSVKKLEFTEVLKVISCE 584 Query: 182 FADYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 +Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD Sbjct: 585 MENYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDD 641 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 ++T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D Sbjct: 642 TDNT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDA 691 Query: 539 DSITLEDALVLL 574 + + L+ A +L Sbjct: 692 NLLDLQMAEKIL 703 [21][TOP] >UniRef100_Q40K50 DNA topoisomerase n=1 Tax=Ehrlichia chaffeensis str. Sapulpa RepID=Q40K50_EHRCH Length = 820 Score = 126 bits (317), Expect = 1e-27 Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 1/192 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS +Y FTAD+E +LD +S G WK +L +W F + +V K++ + Sbjct: 525 FSRYVEYDFTADLEEKLDLISNGKINWKEVLHQFWFLFIDNVNSVKKLEFTEVLKVISCE 584 Query: 182 FADYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 +Y+F S + SRVCP C +GTL +S+ G F+GC ++P CKY K + S DD Sbjct: 585 MENYIFSSDKSESSRVCPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDD 641 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 ++T + PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D Sbjct: 642 TDNT-------QYPKILGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDA 691 Query: 539 DSITLEDALVLL 574 + + L+ A +L Sbjct: 692 NLLDLQMAEKIL 703 [22][TOP] >UniRef100_Q4UM42 DNA topoisomerase 1 n=1 Tax=Rickettsia felis RepID=TOP1_RICFE Length = 776 Score = 124 bits (312), Expect = 4e-27 Identities = 74/191 (38%), Positives = 105/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 DY S +S+ CPSC G L K+ +FGA F+ C +P C + K++ S +D++E Sbjct: 586 L-DYHLFSENKESKACPSCKTGELSLKLGKFGA--FLACSNYPECTF-RKSIVSGNDNNE 641 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 D T E K+LG + E I LK GPYG YVQLGE PKR+ VP + + Sbjct: 642 ND-GDLAATPNENKVLGTDKDGIE-IYLKKGPYGPYVQLGEQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITLE AL LL Sbjct: 700 DITLEMALKLL 710 [23][TOP] >UniRef100_C3PN41 DNA topoisomerase n=1 Tax=Rickettsia africae ESF-5 RepID=C3PN41_RICAE Length = 776 Score = 124 bits (311), Expect = 5e-27 Identities = 69/191 (36%), Positives = 105/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S++CPSC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P T E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + + Sbjct: 643 EGEPA--TMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [24][TOP] >UniRef100_A4RYV6 DNA topoisomerase (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RYV6_OSTLU Length = 840 Score = 124 bits (311), Expect = 5e-27 Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 20/208 (9%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F DY FTAD+E +LD++++ +WK LL ++WT F+ S + + +V L++K Sbjct: 602 FETYVDYGFTADLEHKLDDITSEQVQWKPLLEEWWTPFRDKISSLSELRVSEVIDALDEK 661 Query: 182 FADYLFGSLPD------KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYI------ 325 +LFG D ++R CPSC G L K S+ AG FIGC ++P C + Sbjct: 662 LGQHLFGEATDSDDVVSEARRCPSCKIGRLGLKPSK--AGGFIGCSRYPECGFTHPLHPI 719 Query: 326 -AKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYT 502 + +DD D T + + PK+LG + + ++I L+ GPYG Y+QLG+ +K Sbjct: 720 RGAIVSDTDDPDFVATVEDPDAVMYPKVLGVDPATGKEISLRLGPYGPYLQLGDGKKAKK 779 Query: 503 PKRASVPH-------VKDVDSITLEDAL 565 PK+ P KDV+ ITL +A+ Sbjct: 780 PKKPPAPRRVGVANIGKDVNKITLAEAI 807 [25][TOP] >UniRef100_C4K2S3 DNA topoisomerase n=1 Tax=Rickettsia peacockii str. Rustic RepID=C4K2S3_RICPU Length = 776 Score = 122 bits (307), Expect = 1e-26 Identities = 68/191 (35%), Positives = 105/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + +I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDAIAAGTLEWKAALNNFWSGFNHNIESVNEQNITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S++CPSC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKICPSCHTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + + Sbjct: 643 EGEPA--AMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [26][TOP] >UniRef100_Q7PBH0 DNA topoisomerase n=1 Tax=Rickettsia sibirica 246 RepID=Q7PBH0_RICSI Length = 776 Score = 122 bits (306), Expect = 2e-26 Identities = 68/191 (35%), Positives = 104/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S++CPSC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + + Sbjct: 643 EGEPA--AMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [27][TOP] >UniRef100_Q92IH1 DNA topoisomerase 1 n=1 Tax=Rickettsia conorii RepID=TOP1_RICCN Length = 776 Score = 122 bits (306), Expect = 2e-26 Identities = 68/191 (35%), Positives = 104/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S++CPSC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKICPSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + + Sbjct: 643 EGEPA--AMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [28][TOP] >UniRef100_Q2RPE8 DNA topoisomerase n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RPE8_RHORT Length = 915 Score = 122 bits (305), Expect = 3e-26 Identities = 71/199 (35%), Positives = 104/199 (52%), Gaps = 8/199 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS YSFTAD+E +LD +S G WK +L +W FK+ E T+ + + +V L+K+ Sbjct: 533 FSRYVQYSFTADLENQLDEISDGKLGWKTVLERFWMDFKAAIEGTATLRVSEVLDALDKE 592 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D RVCP C+ G L ++ +FGA F+GC +P CK+ + + Sbjct: 593 LGPHLFPQAEDGHDPRVCPVCSAGRLGLRIGKFGA--FVGCSNYPDCKFTRPLVTKEGEG 650 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE------DRKGYTPKRAS 517 + ++ T K LG + S E + L+ GPYG+YVQ GE +K P R S Sbjct: 651 GDGAALAEDGT----KPLGKDPVSGEDVTLRKGPYGLYVQKGEAAPVEKGKKAVKPPRVS 706 Query: 518 VPHVKDVDSITLEDALVLL 574 +P D +I L+ AL LL Sbjct: 707 IPKDMDAATIDLDIALKLL 725 [29][TOP] >UniRef100_A8GN12 DNA topoisomerase n=1 Tax=Rickettsia akari str. Hartford RepID=A8GN12_RICAH Length = 776 Score = 122 bits (305), Expect = 3e-26 Identities = 68/191 (35%), Positives = 108/191 (56%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F + + + I ++ ++K Sbjct: 526 FRKYVEYDFTAGLENELDEIAAGKLEWKAALNNFWSGFNNNIKSVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D++E Sbjct: 586 LDYHLFGE-NKESKVCPSCKTGELSLKLGKFGA--FLACSNYPECTF-RKSIVSGNDNNE 641 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 + + + K+LG + E I LK GPYG Y+Q GE PKR+ +P + + + Sbjct: 642 NEA-ELSAIPNGNKILGTDKDGIE-IYLKKGPYGPYIQHGEQEGKVKPKRSPIPAILNQN 699 Query: 542 SITLEDALVLL 574 ITLE AL LL Sbjct: 700 DITLEIALKLL 710 [30][TOP] >UniRef100_A8F198 DNA topoisomerase n=1 Tax=Rickettsia massiliae MTU5 RepID=A8F198_RICM5 Length = 776 Score = 122 bits (305), Expect = 3e-26 Identities = 69/191 (36%), Positives = 103/191 (53%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S+VC SC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKVCTSCNTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P E K+LG + E I LK GPYG Y+QLGE PKR+ VP + + Sbjct: 643 EGEPA--AMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGEQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [31][TOP] >UniRef100_B0BX36 DNA topoisomerase n=1 Tax=Rickettsia rickettsii str. Iowa RepID=B0BX36_RICRO Length = 776 Score = 121 bits (304), Expect = 3e-26 Identities = 68/191 (35%), Positives = 104/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S++CPSC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKICPSCHTGKLSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + + Sbjct: 643 EGEPA--AMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [32][TOP] >UniRef100_A8GWP3 DNA topoisomerase n=1 Tax=Rickettsia bellii OSU 85-389 RepID=A8GWP3_RICB8 Length = 800 Score = 121 bits (304), Expect = 3e-26 Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK LG++W F E + +I ++ +++ Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKSALGNFWNGFNHNIESVNKQNITEIISYVQQA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 ++FG D S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D++E Sbjct: 586 LDYHIFGENKD-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECNF-RKSIVSGNDNNE 641 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKD 535 D + + E K+LG + E I LK GPYG Y+Q GE D K PKR+ +P + Sbjct: 642 AD-GEAKDIVNENKVLGKDKEGIE-IYLKKGPYGPYIQYGEQVDSK-IKPKRSPLPAGLN 698 Query: 536 VDSITLEDALVLL 574 + ITL+ AL LL Sbjct: 699 QNDITLDMALKLL 711 [33][TOP] >UniRef100_A8GRN0 DNA topoisomerase n=1 Tax=Rickettsia rickettsii str. 'Sheila Smith' RepID=A8GRN0_RICRS Length = 776 Score = 121 bits (304), Expect = 3e-26 Identities = 68/191 (35%), Positives = 104/191 (54%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F E + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDAIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S++CPSC G L K+ +FGA F+ C +P C + + +D+++ Sbjct: 586 LDYHLFGE-NKESKICPSCHTGELSLKLGKFGA--FLACSNYPECTFRKSIVSGNDNNEN 642 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E P E K+LG + E I LK GPYG Y+QLG+ PKR+ VP + + Sbjct: 643 EGEPA--AMPNENKVLGTDKDGVE-IYLKKGPYGPYIQLGKQEGKVKPKRSPVPASLNQN 699 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 700 DITLDIALKLL 710 [34][TOP] >UniRef100_A8EZB7 DNA topoisomerase n=1 Tax=Rickettsia canadensis str. McKiel RepID=A8EZB7_RICCK Length = 777 Score = 121 bits (304), Expect = 3e-26 Identities = 68/191 (35%), Positives = 106/191 (55%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK L ++W+ F + + I ++ ++K Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKSALSNFWSGFNHNIKSVNEQKITEIISYVQKA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +LFG +S+ CPSC G L K+ +FGA F+ C+ +P+C + K++ S ++++E Sbjct: 586 LDYHLFGE-NQESKACPSCKTGELSLKLGKFGA--FLACNNYPKCTF-RKSIVSGNNNNE 641 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 + T EE K+LG + E I LK GPYG Y+Q GE KR+ VP + Sbjct: 642 NEDKLSTTPNEENKVLGTDKDGIE-IYLKKGPYGPYIQRGEHEGTVKLKRSPVPASLNQS 700 Query: 542 SITLEDALVLL 574 ITL+ AL LL Sbjct: 701 DITLDIALKLL 711 [35][TOP] >UniRef100_A4TWS2 DNA topoisomerase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWS2_9PROT Length = 886 Score = 121 bits (304), Expect = 3e-26 Identities = 72/196 (36%), Positives = 101/196 (51%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y+FTAD+E +LD VS G WK +L D+W +F+ E T + + +V + L+ + Sbjct: 531 FGRYVEYNFTADLENQLDEVSDGKINWKKVLEDFWRQFQGAVEGTKELRVSEVIEKLDAE 590 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 + F PD R+CP C G L K+ +FGA FIGC +P C+Y + Sbjct: 591 LGAHFF---PDDGTGHDPRLCPLCNAGRLSLKLGKFGA--FIGCANYPECRYTRPLAVAG 645 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPH 526 + + P + PK LG GS E + L+ GPYG YVQLGE G PKR S+ Sbjct: 646 EGGEGGGEPLP----DGPKELGIEPGSGEPVTLRKGPYGWYVQLGE---GAKPKRVSLYK 698 Query: 527 VKDVDSITLEDALVLL 574 + +I LE L LL Sbjct: 699 GLEPGAIDLEIGLKLL 714 [36][TOP] >UniRef100_Q1RIM1 DNA topoisomerase 1 n=1 Tax=Rickettsia bellii RML369-C RepID=TOP1_RICBR Length = 800 Score = 121 bits (304), Expect = 3e-26 Identities = 72/193 (37%), Positives = 110/193 (56%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E ELD ++AG +WK LG++W F E + +I ++ +++ Sbjct: 526 FKKYVEYDFTAGLENELDEIAAGKLEWKSALGNFWNGFNHNIESVNKQNITEIISYVQQA 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 ++FG D S+VCPSC G L K+ +FGA F+ C +P C + K++ S +D++E Sbjct: 586 LDYHIFGENKD-SKVCPSCKTGELSLKLGKFGA--FLACSNYPECNF-RKSIVSGNDNNE 641 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHVKD 535 D + + E K+LG + E I LK GPYG Y+Q GE D K PKR+ +P + Sbjct: 642 AD-GEAKDIVNENKVLGKDKEGIE-IYLKKGPYGPYIQYGEQVDSK-IKPKRSPLPAGLN 698 Query: 536 VDSITLEDALVLL 574 + ITL+ AL LL Sbjct: 699 QNDITLDMALKLL 711 [37][TOP] >UniRef100_Q3YSD8 DNA topoisomerase n=1 Tax=Ehrlichia canis str. Jake RepID=Q3YSD8_EHRCJ Length = 820 Score = 120 bits (301), Expect = 7e-26 Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS +Y FTAD+E ELD +S G WK +L +W F + ++ K++ + Sbjct: 525 FSRYVEYDFTADLEEELDLISNGKINWKKVLHKFWFLFIDNVNSVKKLEFTEILKVISCE 584 Query: 182 FADYLFGSLPDKS---RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 +Y+F S DKS RVCP+C +GTL +S+ G F+GC +P CKY D Sbjct: 585 MENYIFSS--DKSETGRVCPACNDGTLGLNISK--NGIFLGCSGYPECKYTKNV--GGDL 638 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 D+ D ++ PK+LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P Sbjct: 639 VDDVD------NVQYPKVLGIDTATCQEIYLKKGPYGVYLQIGSDKNG---KRAAIPKNM 689 Query: 533 DVDSITLEDALVLL 574 + + + L+ A +L Sbjct: 690 NANLLDLQMAEKIL 703 [38][TOP] >UniRef100_A9D533 DNA topoisomerase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D533_9RHIZ Length = 919 Score = 120 bits (301), Expect = 7e-26 Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F ++ FTAD+E +LD +SAG WK +L ++W +F ++ + T + + QV L + Sbjct: 572 FERYVEFGFTADLEEKLDRISAGELAWKDVLREFWVQFHAHIDDTKELRVSQVLDALNEA 631 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+CP+C G L K+ ++GA F+GC +P C + + S+D D Sbjct: 632 LAPLVFPVREDGSNPRICPTCGTGNLSLKLGKYGA--FVGCSNYPDCNFTRQ--LSADQD 687 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 D N EPK LG + + E I L++G +G YVQ GE G KR+S+P Sbjct: 688 ASGDAALSN----EPKDLGKDPHTEEPITLRTGRFGPYVQRGE---GKEAKRSSLPKGWA 740 Query: 536 VDSITLEDALVLL 574 VDSI E AL LL Sbjct: 741 VDSIDHEKALALL 753 [39][TOP] >UniRef100_C7JES1 DNA topoisomerase I n=8 Tax=Acetobacter pasteurianus RepID=C7JES1_ACEP3 Length = 897 Score = 120 bits (300), Expect = 1e-25 Identities = 75/196 (38%), Positives = 103/196 (52%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F D FTA +E LD++S G +WK +L +W F T + I V L+K Sbjct: 529 FERYVDTGFTASLEELLDDISGGRAQWKQVLAAFWNDFSKAVSGTKELTITDVLNALDKD 588 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 + F D S RVCPSC G L K+ R+GA FIGC +P C+Y + +SD Sbjct: 589 LGPFFFPERADGSDPRVCPSCGTGRLGLKLGRYGA--FIGCSNYPECQYTRR--LTSDSA 644 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 +E D + +LLG N + E I ++ GP+G+YVQ GE + K PKRAS+P Sbjct: 645 EEGDDAALK---DGMRLLGQNPETGEDITVRQGPWGLYVQQGEPNPEDKKAKPKRASLPK 701 Query: 527 VKDVDSITLEDALVLL 574 + +SITL+ AL LL Sbjct: 702 NINGESITLDQALGLL 717 [40][TOP] >UniRef100_C5Z8K8 Putative uncharacterized protein Sb10g010330 n=1 Tax=Sorghum bicolor RepID=C5Z8K8_SORBI Length = 227 Score = 118 bits (296), Expect = 3e-25 Identities = 74/189 (39%), Positives = 94/189 (49%), Gaps = 24/189 (12%) Frame = +2 Query: 38 METELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVH----------------------I 151 METELDNVSAG T+WKGLL DYW RF YC S + I Sbjct: 1 METELDNVSAGSTEWKGLLKDYWERFSKYCADASKLDGRKMYLVYHIALPRLEIEIEFDI 60 Query: 152 HQVEKMLEKKFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAK 331 QVE+MLE+KF LF + SR+CP +YIA+ Sbjct: 61 VQVERMLEEKFGPILFPDVDKDSRICP----------------------------RYIAR 92 Query: 332 TLYSSDDDDE--EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTP 505 + +D+ E E++P+ T P+LLG S++K+ LK GPYG YVQ GED+KG P Sbjct: 93 SFSQQEDETEPTEESPKSFT----PRLLGVMPDSDQKVFLKQGPYGYYVQNGEDKKGLFP 148 Query: 506 KRASVPHVK 532 KRAS+ K Sbjct: 149 KRASLSEGK 157 [41][TOP] >UniRef100_Q0AQ63 DNA topoisomerase n=1 Tax=Maricaulis maris MCS10 RepID=Q0AQ63_MARMM Length = 867 Score = 118 bits (295), Expect = 4e-25 Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +ET+LD VSAG WK LL D+WT F++ + + I V L + Sbjct: 522 FARYVEYDFTASLETQLDKVSAGELDWKQLLRDFWTDFRAAIDEIGELRITNVLDALNEA 581 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A ++F D + R+CPSC EGTL ++ +FGA F+GC HP C + + +DD Sbjct: 582 LAPHIFPEKEDGTDPRLCPSCKEGTLSLRLGKFGA--FLGCSNHPDCSFTRQMSPPGEDD 639 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQL---GEDRKGYTPKRASVPH 526 + D ++ P+ + + + LK+G +G Y+Q+ GED+ PKR+S+P Sbjct: 640 AQGD----RVIVQHPE-------TGKDVELKNGRFGWYLQMQLDGEDK----PKRSSIPK 684 Query: 527 VKDVDSITLEDALVLL 574 D ++T E A+ L+ Sbjct: 685 GWDAATLTEEQAIKLI 700 [42][TOP] >UniRef100_A5B2R3 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5B2R3_VITVI Length = 672 Score = 118 bits (295), Expect = 4e-25 Identities = 59/86 (68%), Positives = 69/86 (80%) Frame = +2 Query: 317 KYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG 496 +YIAK L D DD+E+ Q+ T EEPK+LG + GS+EKILLK+GPYG Y+QLGEDRKG Sbjct: 50 RYIAKML---DGDDDEEVASQDKTFEEPKVLGLSPGSSEKILLKNGPYGFYLQLGEDRKG 106 Query: 497 YTPKRASVPHVKDVDSITLEDALVLL 574 Y PKRASV H+KDV SITLEDAL LL Sbjct: 107 YLPKRASVSHIKDVGSITLEDALELL 132 [43][TOP] >UniRef100_Q6G3F7 DNA topoisomerase n=1 Tax=Bartonella henselae RepID=Q6G3F7_BARHE Length = 853 Score = 117 bits (293), Expect = 6e-25 Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTAD+E +LD +S G WK +L D+W F + + I V +L Sbjct: 529 FNRYVEYGFTADLEEKLDLISDGKLSWKDVLRDFWDGFNASITNIQELRITNVLDVLNVT 588 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A F D S R CP CT G L K+ R+GA F+GC +P CKY T D Sbjct: 589 LAPLAFPVREDGSDVRSCPLCTNGQLSLKLGRYGA--FVGCSNYPECKY---TRQLGTDP 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 EE+ +N +EP +LG + + + + L++G +G Y+QLGE ++ KRA +P Sbjct: 644 GEENEAIRN---DEPVILGVDPKTGKDVTLRNGRFGPYIQLGESKEA---KRAGLPKEWQ 697 Query: 536 VDSITLEDALVLL 574 + ITLE AL L+ Sbjct: 698 AEKITLEKALSLI 710 [44][TOP] >UniRef100_A9GZQ5 DNA topoisomerase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9GZQ5_GLUDA Length = 924 Score = 117 bits (293), Expect = 6e-25 Identities = 68/196 (34%), Positives = 105/196 (53%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F D FTA +E +LD++S G W+ ++ +W F ++T ++ I V L+ Sbjct: 531 FERYVDTQFTAGLEEQLDDISGGRADWRDVMSAFWQDFSRAVDQTKDLKISDVISALDAD 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A + F + PD S RVC +C G L K+ R+GA FIGC +P C++ + + +D Sbjct: 591 LAPHFFPAHPDGSDPRVCTACGTGRLGLKLGRYGA--FIGCSNYPTCQFTRRLVVDPKED 648 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E DT + +LLG G E + ++ GP+G+YVQ GE + K P+RA++P Sbjct: 649 GEADTLKDGM-----RLLGQTPG-GEDVTVRRGPWGLYVQQGEPDPEDKKAKPRRATIPR 702 Query: 527 VKDVDSITLEDALVLL 574 + D ITL+ AL LL Sbjct: 703 GIEGDKITLDQALGLL 718 [45][TOP] >UniRef100_C6ADW8 DNA topoisomerase n=1 Tax=Bartonella grahamii as4aup RepID=C6ADW8_BARGA Length = 857 Score = 116 bits (290), Expect = 1e-24 Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTAD+E +LD +S G WK +L D+W F + + I V +L Sbjct: 529 FNRYVEYGFTADLEEKLDLISDGKLSWKDVLRDFWDGFNASISNIQELRITNVLDVLNVT 588 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A F D S R CP C G L K+ R+GA F+GC +P CKY T D Sbjct: 589 LAPLAFPEREDGSDVRSCPLCKNGQLSLKLGRYGA--FVGCSNYPECKY---THQLGTDT 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 EE+ +N +EP +LG + + + I L++G +G Y+QLGE ++ KRA +P Sbjct: 644 GEENEAVRN---DEPVILGIDPETGKDISLRNGRFGPYIQLGESKE---VKRAGLPKEWQ 697 Query: 536 VDSITLEDALVLL 574 +++TL+ AL LL Sbjct: 698 AENVTLDKALALL 710 [46][TOP] >UniRef100_A0NTN3 DNA topoisomerase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTN3_9RHOB Length = 887 Score = 115 bits (289), Expect = 2e-24 Identities = 70/193 (36%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F ++ FTA +E +LD +SAG W +L D+WT F + ++ + V L + Sbjct: 534 FHRYVEFDFTASLEEQLDKISAGELSWLDVLRDFWTGFSGAVDEIKDLRVAHVIDALNEL 593 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D S R CPSC G L KVSR+GA FIGC +P C + + S +D Sbjct: 594 LGPHIFPPKEDGSDPRKCPSCDSGQLSLKVSRWGA--FIGCSNYPECGFTRQLGKPSGED 651 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E D + PK+LG + + + L+ G +G YVQLGE+ K PKRAS+P Sbjct: 652 GEGD--------DGPKVLGTDPETGLDVSLRKGRFGPYVQLGEEAK---PKRASLPRGWS 700 Query: 536 VDSITLEDALVLL 574 + LE AL LL Sbjct: 701 APDMDLEKALQLL 713 [47][TOP] >UniRef100_B9JDL6 DNA topoisomerase n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JDL6_AGRRK Length = 889 Score = 115 bits (288), Expect = 2e-24 Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTAD+E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 533 FTKYVEYDFTADLEEKLDRISAGELNWKDVLRDFWRDFFAQIEDTKELRVTNVLDALNEA 592 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C Y + Sbjct: 593 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQL------S 644 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E T + + + EPK LG + +NE++ L+SG +G Y+Q G+ G KRAS+P Sbjct: 645 SEGGTEAEASGLNEPKALGTDPVTNEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWK 701 Query: 536 VDSITLEDALVLL 574 + I E A+ L+ Sbjct: 702 PEDIDYEKAMALI 714 [48][TOP] >UniRef100_A9IU35 DNA topoisomerase n=1 Tax=Bartonella tribocorum CIP 105476 RepID=A9IU35_BART1 Length = 858 Score = 115 bits (288), Expect = 2e-24 Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTAD+E +LD +S G WK +L D+W F + + I V +L Sbjct: 529 FNRYVEYGFTADLEEKLDLISDGKLSWKDVLRDFWDGFNTSISNIQELRIANVLDVLNVT 588 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A F D S R CP C G L K+ R+GA F+GC +P C+Y + L ++D + Sbjct: 589 LAPLAFPEREDGSDVRSCPLCKNGQLSLKLGRYGA--FVGCSNYPECRY-TRQLGTTDTE 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 +E + + +EP +LG + + + I L++G +G Y+Q GE ++ KRA +P Sbjct: 646 EENEAVRN----DEPVMLGIDPETGKDISLRNGRFGPYIQRGESKE---VKRAGLPKEWQ 698 Query: 536 VDSITLEDALVLL 574 ++ITLE AL LL Sbjct: 699 AENITLERALALL 711 [49][TOP] >UniRef100_A7IM95 DNA topoisomerase n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IM95_XANP2 Length = 901 Score = 115 bits (287), Expect = 3e-24 Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD VSA WK +L +W F + E T ++ + QV L++ Sbjct: 528 FKRYVEYDFTADLEEKLDEVSAAELDWKEVLRAFWQDFHTAVEATKDLRVSQVLDALDEM 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D S R+CP+C G L K+ +FGA FIGC +P C++ + D Sbjct: 588 LTAHIFPPTQDGSDPRLCPTCGNGRLSLKMGKFGA--FIGCSNYPECRHTRP--LTGDGA 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E D ++ LG + S E + +++G +G Y+QLGE + G PKR+S+P Sbjct: 644 PEGDGKRE---------LGIDPESGEDVTIRAGRFGTYLQLGEGKDGEKPKRSSLPKGLA 694 Query: 536 VDSITLEDALVLL 574 + LE AL LL Sbjct: 695 PADVDLETALKLL 707 [50][TOP] >UniRef100_B5ZYP8 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZYP8_RHILW Length = 884 Score = 114 bits (286), Expect = 4e-24 Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTAD+E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 531 FTKYVEYDFTADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEA 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C Y + SS++ Sbjct: 591 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQ--LSSENG 646 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E D I EPK LG + + E++ L+SG +G Y+Q G+ G KRAS+P Sbjct: 647 GEAD----GAAINEPKNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWK 699 Query: 536 VDSITLEDALVLL 574 + I E A+ L+ Sbjct: 700 PEDIDYEKAMALI 712 [51][TOP] >UniRef100_A5FWG8 DNA topoisomerase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWG8_ACICJ Length = 891 Score = 114 bits (286), Expect = 4e-24 Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + FTAD+E +LD VS G W+ ++ D+W F E+ ++ I V L+++ Sbjct: 526 FGRYVETGFTADLEEKLDEVSDGRLDWRSVMRDFWADFSGAVEQIKDLKISDVIDALDEE 585 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 + F + D S RVC +C G L ++ RFGA FIGC +P C+Y + +D Sbjct: 586 LGPHFFPAREDGSDPRVCQACGTGRLGLRLGRFGA--FIGCSNYPECQYTRRLAVEGGED 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 + + + KLLG N+ + L+ GPYG+YVQLGE + K P+RA++P Sbjct: 644 EGDQLR------DGMKLLGENA-EGIPVTLRRGPYGLYVQLGEPDPEDKKAKPRRAALPR 696 Query: 527 VKDVDSITLEDALVLL 574 ++ITLE A+ LL Sbjct: 697 GMSGETITLEQAIGLL 712 [52][TOP] >UniRef100_Q0BZX2 DNA topoisomerase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZX2_HYPNA Length = 859 Score = 114 bits (285), Expect = 5e-24 Identities = 68/197 (34%), Positives = 101/197 (51%), Gaps = 6/197 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS +Y FTA +E +LD +S G WK L ++W +F + + T ++ + V L + Sbjct: 518 FSRYVEYDFTAGLEEKLDVISDGKLDWKAFLREFWQQFAADIDGTKDLRVSAVLDALNEA 577 Query: 182 FADYLF------GSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 343 Y+F G+ + R CP C EG L K+ +FGA F+GC +HP CKY + +S Sbjct: 578 LGAYVFPRQDAEGNPIENPRQCPLCKEGELSMKLGKFGA--FVGCSRHPECKYTRQ--FS 633 Query: 344 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 523 S+ D P N +G + + ILLKSG +G YV++ K PKRAS+ Sbjct: 634 SEGGDAAINPDGNE-------IGIHPDTGAMILLKSGRFGPYVEMANGEK---PKRASLA 683 Query: 524 HVKDVDSITLEDALVLL 574 + +TLE A+ LL Sbjct: 684 KADNAAELTLERAVELL 700 [53][TOP] >UniRef100_A4WUZ1 DNA topoisomerase n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WUZ1_RHOS5 Length = 880 Score = 114 bits (285), Expect = 5e-24 Identities = 73/194 (37%), Positives = 104/194 (53%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTAD+E ELD+VSAG +K +L +W F + T+++ I +V L+ Sbjct: 517 FRKYVEYDFTADLEGELDDVSAGERNYKEVLARFWRDFSAAVAETADLRIGEVLDKLDDF 576 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D+D Sbjct: 577 LAPHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPECRYTRPISVTGDED 635 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 N + KLLG + + I L+SG +G YVQ GE + P RAS+P Sbjct: 636 --------NAISPDGKLLGHDE-DGQPITLRSGRFGPYVQRGEATAEVPKPPRASLPKGW 686 Query: 533 DVDSITLEDALVLL 574 DS+ LE A +LL Sbjct: 687 APDSVDLERARMLL 700 [54][TOP] >UniRef100_Q5FRH2 DNA topoisomerase n=1 Tax=Gluconobacter oxydans RepID=Q5FRH2_GLUOX Length = 898 Score = 114 bits (284), Expect = 7e-24 Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F D FTA +E +LD++S G W ++ +W F + +T ++ I V L++ Sbjct: 528 FERYVDTGFTASLEEQLDDISGGRADWHDVMAAFWHDFSAAVAQTKDLKISDVIDALDED 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 + F PD + RVC SC G L ++ +FGA FIGC +P C++ + + Sbjct: 588 LGPHFFPPRPDGADPRVCTSCGTGRLGLRLGKFGA--FIGCSNYPTCQFTRRLV-----A 640 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 +E DT N + PK+LG + + E + ++ GPYG+Y+Q GE + K PKR ++P Sbjct: 641 EEGDTEGLN---DGPKVLGQDPETGEDVTIRRGPYGLYIQRGEPNPEDKKAKPKRTTIPK 697 Query: 527 VKDVDSITLEDALVLL 574 D +++TLE AL LL Sbjct: 698 GLDGNTMTLEQALGLL 713 [55][TOP] >UniRef100_Q0BU00 DNA topoisomerase n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BU00_GRABC Length = 909 Score = 113 bits (283), Expect = 9e-24 Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F D +FTA +ET+LD +S G W+ ++ +W F E+T ++ I V L++ Sbjct: 540 FERYVDTNFTASLETQLDEISDGRADWRQVMQAFWQDFYQAVEQTKDLKISDVIDALDRD 599 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 + F + D + R+CP+C +G L ++ R G+ FIGC +P C Y + + Sbjct: 600 LGPHFFPTREDGTDPRICPACGDGRLGLRLGRHGS--FIGCSNYPGCSYTRRLGIDGAEG 657 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPHV 529 + E T E ++LG + + E I +K GPYG+YVQ GE +G P+RAS+P Sbjct: 658 EAE------TLKEGMRVLGQHPETGEDITVKRGPYGLYVQQGEAEEGSKKKPRRASLPRG 711 Query: 530 KDVDSITLEDALVLL 574 D ++I L+ AL LL Sbjct: 712 VDGETILLDQALGLL 726 [56][TOP] >UniRef100_B5ZK59 DNA topoisomerase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZK59_GLUDA Length = 924 Score = 113 bits (283), Expect = 9e-24 Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F D FTA +E +LD++S G W+ ++ +W F ++T ++ I V L+ Sbjct: 531 FERYVDTQFTAGLEEQLDDISGGRADWRDVMSAFWQDFSRAVDQTKDLKISDVISALDAD 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A + F + D S RVC +C G L K+ R+GA FIGC +P C++ + + +D Sbjct: 591 LAPHFFPAHLDGSDPRVCTACGTGRLGLKLGRYGA--FIGCSNYPTCQFTRRLVVDPKED 648 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E DT + +LLG G E + ++ GP+G+YVQ GE + K P+RA++P Sbjct: 649 GEADTLKDGM-----RLLGQTPG-GEDVTVRRGPWGLYVQQGEPDPEDKKAKPRRATIPR 702 Query: 527 VKDVDSITLEDALVLL 574 + D ITL+ AL LL Sbjct: 703 GIEGDKITLDQALGLL 718 [57][TOP] >UniRef100_Q5HBJ0 DNA topoisomerase n=1 Tax=Ehrlichia ruminantium str. Welgevonden RepID=Q5HBJ0_EHRRW Length = 819 Score = 113 bits (282), Expect = 1e-23 Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 1/192 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTAD+E +LD +S G WK +L +W F + Q+ + + Sbjct: 523 FNRYVEYDFTADLEEKLDLISNGKIGWKEVLHQFWFLFIDNVNSVKKLEFTQILNAISSE 582 Query: 182 FADYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 ++F S + + ++CP C GTL +S+ G F+GC Q+P CKY K + S D+ Sbjct: 583 MESHIFPSDVSEVDKMCPVCNVGTLSLNISK--NGVFLGCSQYPECKY-TKNIGDSTVDN 639 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 E + P++LG ++ S E I LK GPYGIY+Q+G + G KRA++P D+ Sbjct: 640 TE-------VSQYPRVLGSDAASGEDIYLKKGPYGIYLQIGSGKDG---KRATLPKDIDL 689 Query: 539 DSITLEDALVLL 574 + + LE A +L Sbjct: 690 NLLDLEMAKKIL 701 [58][TOP] >UniRef100_Q1MII0 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MII0_RHIL3 Length = 884 Score = 113 bits (282), Expect = 1e-23 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTAD+E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 531 FTKYVEYDFTADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEA 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C Y + SS++ Sbjct: 591 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPDCNYTRQ--LSSENG 646 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E D + EPK LG + + E++ L+SG +G Y+Q G+ G KRAS+P Sbjct: 647 GEAD----GAALNEPKNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWK 699 Query: 536 VDSITLEDALVLL 574 + I E A+ L+ Sbjct: 700 PEDIDYEKAMALI 712 [59][TOP] >UniRef100_B8EMQ0 DNA topoisomerase n=1 Tax=Methylocella silvestris BL2 RepID=B8EMQ0_METSB Length = 977 Score = 113 bits (282), Expect = 1e-23 Identities = 71/193 (36%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ Y FTAD+E +LD VS WK +L D+W F T ++ +V L + Sbjct: 527 FARYVGYDFTADLEEKLDRVSNHEIDWKQVLRDFWLDFSGALAGTKDLRTTEVLDRLNEI 586 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D S R CPSC EG L K+ +FGA FIGC +P CK+ +TL + D Sbjct: 587 LGPHIFPPKEDGSDPRGCPSCGEGKLSLKLGKFGA--FIGCSNYPECKF-TRTLAAPDGA 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + K LG + S E+I L+ G +G+YVQ GE K PKR+S+P Sbjct: 644 EANGGERPGV-----KSLGVDPDSGEEITLRDGRFGVYVQQGEGEK---PKRSSLPPTIA 695 Query: 536 VDSITLEDALVLL 574 +TLE A+ LL Sbjct: 696 PADLTLEQAIALL 708 [60][TOP] >UniRef100_Q5LNX4 DNA topoisomerase n=1 Tax=Ruegeria pomeroyi RepID=Q5LNX4_SILPO Length = 880 Score = 112 bits (281), Expect = 2e-23 Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E +LD+VSAG +K LLG +W F + TS + I +V L++ Sbjct: 550 FRQYVGYEFTANLEEQLDDVSAGSRDYKDLLGRFWRDFSAAISETSELRISEVLDKLDEA 609 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R+CP C G L K SR G F+GC +P C+Y +DD Sbjct: 610 LAPQLYPPREDGSDPRICPKCGTGQLHLKTSRTGG--FVGCGNYPECRYTRPISGDADDS 667 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 E +LLG + G ++I LK+G +G YVQ GE + P RAS+P Sbjct: 668 AE-------------RLLGEDGG--DEIWLKAGRFGPYVQRGEISEENKKPPRASLPRGW 712 Query: 533 DVDSITLEDALVLL 574 + + LE ALVLL Sbjct: 713 SAEDLDLEKALVLL 726 [61][TOP] >UniRef100_B9KIC6 DNA topoisomerase n=2 Tax=Anaplasma marginale RepID=B9KIC6_ANAMF Length = 813 Score = 112 bits (281), Expect = 2e-23 Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS +Y FTA++E ELD +S G WK +L +W +F S + + ++ K + K Sbjct: 524 FSRYVEYDFTANLEEELDLISNGNMAWKEVLRRFWHKFISDVSTVKGIEVSEILKSITKD 583 Query: 182 FADYLFGSLPDK--SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 Y F S + R CP C EG L+ + ++ A F+GC+++P CKY S Sbjct: 584 LEGYAFSSSSGEVVDRSCPGCGEGELMLNIGKYKA--FLGCNRYPECKYTRGIGGESGVC 641 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + E PK+LG + + E+I+LK+GPYG Y+QLG++ +G KR +VP + Sbjct: 642 RD----------EFPKVLGLDDATQEEIVLKNGPYGEYLQLGDNAQG---KRVAVP--QG 686 Query: 536 VDSITLEDALVLL 574 + ITL+ A LL Sbjct: 687 IQEITLDVAKKLL 699 [62][TOP] >UniRef100_UPI00019049A4 DNA topoisomerase I n=1 Tax=Rhizobium etli 8C-3 RepID=UPI00019049A4 Length = 378 Score = 112 bits (280), Expect = 2e-23 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTAD+E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 168 FTKYVEYDFTADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEA 227 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C Y + SS++ Sbjct: 228 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQ--LSSENG 283 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E + + EPK LG + + E++ L+SG +G Y+Q G+ G KRAS+P Sbjct: 284 GE----AEGVALNEPKNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWK 336 Query: 536 VDSITLEDALVLL 574 + I E A+ L+ Sbjct: 337 PEDIDYEKAMALI 349 [63][TOP] >UniRef100_Q5FHL9 DNA topoisomerase n=1 Tax=Ehrlichia ruminantium str. Gardel RepID=Q5FHL9_EHRRG Length = 819 Score = 112 bits (280), Expect = 2e-23 Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 1/192 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTAD+E +LD +S G WK +L +W F + Q+ + + Sbjct: 523 FNRYVEYDFTADLEEKLDLISNGKIGWKEVLHQFWFLFIDNVNSVKKLEFTQILNAISSE 582 Query: 182 FADYLFGS-LPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 ++F S + + ++CP C GTL +S+ G F+GC Q+P CKY K + S D+ Sbjct: 583 MESHIFPSDVSEVDKMCPVCNVGTLSLNISK--NGVFLGCSQYPECKY-TKNIGDSTVDN 639 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 E + P++LG ++ S E I LK GPYGIY+Q+G + G KRA++P D+ Sbjct: 640 TE-------VSQYPRVLGSDAASGEDIYLKKGPYGIYLQIGGGKDG---KRATLPKDIDL 689 Query: 539 DSITLEDALVLL 574 + + LE A +L Sbjct: 690 NLLDLEMAKKIL 701 [64][TOP] >UniRef100_Q2K9P9 DNA topoisomerase n=1 Tax=Rhizobium etli CFN 42 RepID=Q2K9P9_RHIEC Length = 884 Score = 112 bits (280), Expect = 2e-23 Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTAD+E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 531 FTKYVEYDFTADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEA 590 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D R+C C G L K+ R+GA F+GC +P C Y + SS++ Sbjct: 591 LAPLVFPKREDGGDPRICQVCGTGNLSLKLGRYGA--FVGCSNYPECNYTRQ--LSSENG 646 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E + + EPK LG + + E++ L+SG +G Y+Q G+ G KRAS+P Sbjct: 647 GE----AEGVALNEPKSLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWK 699 Query: 536 VDSITLEDALVLL 574 + I E A+ L+ Sbjct: 700 PEDIDYEKAMALI 712 [65][TOP] >UniRef100_B3PW33 DNA topoisomerase n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PW33_RHIE6 Length = 884 Score = 112 bits (280), Expect = 2e-23 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTAD+E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 531 FTKYVEYDFTADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEA 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C Y + SS++ Sbjct: 591 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPECNYTRQ--LSSENG 646 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E + + EPK LG + + E++ L+SG +G Y+Q G+ G KRAS+P Sbjct: 647 GE----AEGVALNEPKNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWK 699 Query: 536 VDSITLEDALVLL 574 + I E A+ L+ Sbjct: 700 PEDIDYEKAMALI 712 [66][TOP] >UniRef100_Q0FZT4 DNA topoisomerase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZT4_9RHIZ Length = 914 Score = 112 bits (280), Expect = 2e-23 Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +SAG WK +L ++W F ++ + T + + V L + Sbjct: 536 FDRYVEYDFTADLEEKLDKISAGELDWKDVLREFWREFSAHVDETKELRVSDVLDALNED 595 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAK--TLYSSD 349 A +F D + R CP C G L K+ R+GA F+GC +P C + + T + D Sbjct: 596 LAPLVFPEREDGTEPRACPRCGNGKLSLKLGRYGA--FVGCSNYPECNFTRQLGTSLAVD 653 Query: 350 DDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHV 529 + D + P+ LG + + E I L++G +G YVQ GE G R SVP Sbjct: 654 SSEAGDD-------DGPRELGNDPETGEPITLRTGRFGPYVQRGE---GKEASRTSVPKG 703 Query: 530 KDVDSITLEDALVLL 574 +V SI LE AL LL Sbjct: 704 WEVGSIDLEKALKLL 718 [67][TOP] >UniRef100_D0B740 DNA topoisomerase I n=4 Tax=Brucella RepID=D0B740_BRUME Length = 877 Score = 112 bits (279), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEILRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [68][TOP] >UniRef100_C9U9S4 DNA topoisomerase I n=4 Tax=Brucella abortus RepID=C9U9S4_BRUAB Length = 877 Score = 112 bits (279), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEILRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEQITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [69][TOP] >UniRef100_Q8FW60 DNA topoisomerase n=2 Tax=Brucella suis RepID=Q8FW60_BRUSU Length = 877 Score = 112 bits (279), Expect = 3e-23 Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + I V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRITNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [70][TOP] >UniRef100_Q8YC66 DNA topoisomerase n=1 Tax=Brucella melitensis RepID=Q8YC66_BRUME Length = 901 Score = 112 bits (279), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 552 FERYVEYDFTADLEEKLDLISDGKLSWKEILRDFWRAFSGSVEDIKELRVTNVLDALNEE 611 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 612 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 662 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 663 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 718 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 719 LDTVDHEKAIALL 731 [71][TOP] >UniRef100_C6AUV4 DNA topoisomerase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AUV4_RHILS Length = 884 Score = 112 bits (279), Expect = 3e-23 Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTAD+E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 531 FTKYVEYDFTADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEA 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C Y + SS++ Sbjct: 591 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPDCNYTRQ--LSSENG 646 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + D + EPK LG + + E++ L+SG +G Y+Q G+ G KRAS+P Sbjct: 647 GDAD----GAALNEPKNLGTDPTTGEELTLRSGRFGPYIQRGD---GKEAKRASLPKGWK 699 Query: 536 VDSITLEDALVLL 574 + I E A+ L+ Sbjct: 700 PEDIDYEKAMALI 712 [72][TOP] >UniRef100_B2IEN4 DNA topoisomerase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IEN4_BEII9 Length = 961 Score = 112 bits (279), Expect = 3e-23 Identities = 68/193 (35%), Positives = 96/193 (49%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTAD+E+ LD +S WK +L D+W F T ++ QV L + Sbjct: 527 FGRYVGYDFTADLESSLDKISNHEIDWKQVLRDFWADFSGAIADTKDLRTTQVLDSLNEV 586 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 Y+F D S R CPSC G L K+ +FG+ FIGC +P CK+ + + Sbjct: 587 LGPYIFPDKGDGSNPRACPSCANGQLSLKLGKFGS--FIGCSNYPECKFTRTLSDTGPEG 644 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 +T + K+LG ++ + E+I L+ G +G YVQ GE K PKRAS+P Sbjct: 645 GNGETDRPGV-----KVLGVDAETGEEISLRDGRFGAYVQRGEGEK---PKRASLPKTIA 696 Query: 536 VDSITLEDALVLL 574 +TL+ AL LL Sbjct: 697 PADLTLDMALGLL 709 [73][TOP] >UniRef100_A9WYS3 DNA topoisomerase n=1 Tax=Brucella suis ATCC 23445 RepID=A9WYS3_BRUSI Length = 877 Score = 112 bits (279), Expect = 3e-23 Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + I V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRITNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [74][TOP] >UniRef100_A8I2E5 DNA topoisomerase n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I2E5_AZOC5 Length = 892 Score = 112 bits (279), Expect = 3e-23 Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTAD+E +LD +SA WK +L D+W F + T + + QV L++ Sbjct: 528 FKKYVEYDFTADLEEKLDEISAAEIDWKQVLRDFWNDFSLAVDATKELRVSQVIDALDEI 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF + D S R+CP+C G L K+ +FGA FIGC +P C+Y + L + + Sbjct: 588 LTAHLFPAKEDGSDPRLCPTCGSGRLSLKMGKFGA--FIGCSNYPECRY-TRPLSGGEGE 644 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 D ++ LG + + ++ L+ G +G Y+QLGE G PKR+S+P Sbjct: 645 AGGDGVRK---------LGTDPETGLEVTLRDGRFGAYLQLGEAVDGEKPKRSSLPKGLA 695 Query: 536 VDSITLEDALVLL 574 + LE AL LL Sbjct: 696 PADVDLETALALL 708 [75][TOP] >UniRef100_A9MBP4 DNA topoisomerase n=2 Tax=Brucella RepID=A9MBP4_BRUC2 Length = 877 Score = 112 bits (279), Expect = 3e-23 Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + I V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRITNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [76][TOP] >UniRef100_C9TAH4 DNA topoisomerase I n=1 Tax=Brucella ceti M13/05/1 RepID=C9TAH4_9RHIZ Length = 877 Score = 112 bits (279), Expect = 3e-23 Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + I V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRITNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [77][TOP] >UniRef100_C9V5N7 DNA topoisomerase I n=2 Tax=Brucella neotomae 5K33 RepID=C9V5N7_BRUNE Length = 877 Score = 111 bits (278), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [78][TOP] >UniRef100_UPI0001B4856F DNA topoisomerase I n=1 Tax=Brucella pinnipedialis M163/99/10 RepID=UPI0001B4856F Length = 828 Score = 111 bits (278), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 537 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 596 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 597 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 647 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 648 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 703 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 704 LDTVDHEKAIALL 716 [79][TOP] >UniRef100_UPI0001B48528 DNA topoisomerase I n=2 Tax=Brucella suis bv. 5 str. 513 RepID=UPI0001B48528 Length = 886 Score = 111 bits (278), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 537 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 596 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 597 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 647 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 648 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 703 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 704 LDTVDHEKAIALL 716 [80][TOP] >UniRef100_C9T181 DNA topoisomerase I n=2 Tax=Brucella ceti M644/93/1 RepID=C9T181_9RHIZ Length = 877 Score = 111 bits (278), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [81][TOP] >UniRef100_C7LI90 DNA topoisomerase I n=4 Tax=Brucella RepID=C7LI90_BRUMC Length = 877 Score = 111 bits (278), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [82][TOP] >UniRef100_A5VUT6 DNA topoisomerase n=1 Tax=Brucella ovis ATCC 25840 RepID=A5VUT6_BRUO2 Length = 877 Score = 111 bits (278), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [83][TOP] >UniRef100_C9TJZ0 DNA topoisomerase I n=1 Tax=Brucella pinnipedialis M163/99/10 RepID=C9TJZ0_9RHIZ Length = 848 Score = 111 bits (278), Expect = 3e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 557 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 616 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 617 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 667 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 668 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 723 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 724 LDTVDHEKAIALL 736 [84][TOP] >UniRef100_C5SMZ1 DNA topoisomerase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMZ1_9CAUL Length = 873 Score = 111 bits (278), Expect = 3e-23 Identities = 71/194 (36%), Positives = 95/194 (48%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS Y FTAD+E +LD VSAG WK LL ++W F + S + +V L Sbjct: 522 FSRYVQYDFTADLEEKLDLVSAGDLNWKALLREFWQDFHAKAGEISEFRVSEVLDRLNDA 581 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A ++F D S R CP+C G L K SRFGA F+GC +P CKY Sbjct: 582 LAPHIFPDKGDGSNPRACPTCGTGQLSLKTSRFGA--FVGCSNYPECKYTRPV------- 632 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + + + LG + + + + LK G +G YVQLGE + K PKR+S+P Sbjct: 633 GNPENASEVAAASGDRELGRDPETGKVVALKIGRFGPYVQLGEAESKDDKPKRSSLPKAW 692 Query: 533 DVDSITLEDALVLL 574 SI L+ AL LL Sbjct: 693 PPASIDLDRALKLL 706 [85][TOP] >UniRef100_C4WLG0 DNA topoisomerase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WLG0_9RHIZ Length = 885 Score = 111 bits (278), Expect = 3e-23 Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F + + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKDVLRDFWRDFSGSVDDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C GTL K+ ++GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGTLSLKLGKYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 D + +EPK LG + + E+I ++G +G YVQ GE G KRAS+P Sbjct: 639 -GGDANGEAAAADEPKSLGKDPFTGEEITARTGRFGPYVQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 VD++ E A+ LL Sbjct: 695 VDALDHEKAVALL 707 [86][TOP] >UniRef100_B9QWJ1 DNA topoisomerase n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QWJ1_9RHOB Length = 913 Score = 111 bits (278), Expect = 3e-23 Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F ++ FTA +E +LD +SAG W +L D+WT F + ++ + +V L + Sbjct: 534 FRRYVEFDFTASLEEQLDKISAGELSWLDVLKDFWTAFSGSVDEIKDLRVAEVIDSLNEL 593 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D + R CP+C G L KVSR+GA FIGC+ +P C Y + S ++ Sbjct: 594 LGPHIFPEKEDGTDPRKCPACDTGKLSLKVSRWGA--FIGCENYPECGYTRQLGKPSGEE 651 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E D + PK+ G + + ++ L++G +G YVQLG + K PKR+S+P Sbjct: 652 GEAD--------DGPKVFGEDPETGMEVSLRTGRFGPYVQLGNEAK---PKRSSLPKGWS 700 Query: 536 VDSITLEDALVLL 574 + LE AL LL Sbjct: 701 AADMDLEKALQLL 713 [87][TOP] >UniRef100_B9KNS1 DNA topoisomerase n=2 Tax=Rhodobacter sphaeroides RepID=B9KNS1_RHOSK Length = 884 Score = 111 bits (277), Expect = 5e-23 Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTAD+E ELD+VSAG +K +L +W F + T+++ I +V L++ Sbjct: 518 FRKYVEYDFTADLEGELDDVSAGERNYKEVLARFWRDFSAAVAETADLRIGEVLDKLDEF 577 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D Sbjct: 578 LAPHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPDCRYTRPISVTGD-- 634 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 ++N + KLLG + I L+SG +G YVQ GE + P RAS+P Sbjct: 635 ------EENAISPDGKLLGHDE-DGAPISLRSGRFGPYVQKGEVTAEVPKPPRASLPKGW 687 Query: 533 DVDSITLEDALVLL 574 D++ L+ AL+LL Sbjct: 688 APDTVDLDRALMLL 701 [88][TOP] >UniRef100_B4R961 DNA topoisomerase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R961_PHEZH Length = 878 Score = 111 bits (277), Expect = 5e-23 Identities = 72/193 (37%), Positives = 100/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTAD+E +LD VSAG WK LL ++W F + + +V L++ Sbjct: 522 FGKYVEYDFTADLEDQLDQVSAGDLDWKVLLKNFWADFNAKVGELGQIGTREVIDALDES 581 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A LF + D S RVCP C G L K SR GA FIGC +P C++ + D + Sbjct: 582 LASTLFPPMADGSDPRVCPRCGSGRLSLKPSRTGA--FIGCSNYPECRF-TRPFGPPDAE 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E + ++ LG + + E + LK+G +G YVQLGE K PKR+S+P Sbjct: 639 GAEASGDRD--------LGTDPQTGETVWLKAGRFGPYVQLGEGEK---PKRSSLPKGWS 687 Query: 536 VDSITLEDALVLL 574 V + LE AL LL Sbjct: 688 VADMDLEKALRLL 700 [89][TOP] >UniRef100_B2SB52 DNA topoisomerase n=1 Tax=Brucella abortus S19 RepID=B2SB52_BRUA1 Length = 828 Score = 110 bits (275), Expect = 8e-23 Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 479 FERYVEYDFTADLEEKLDLISDGKLSWKEILRDFWRAFSGSVEDIKELRVTNVLDALNEE 538 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 539 LAPLVFPAREDGRDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 589 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 590 -GGEANGETAASDEPKPLGKDPFTGEQITARTGRFGPYIQRGE---GKEAKRASLPKGWT 645 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 646 LDTVDHEKAIALL 658 [90][TOP] >UniRef100_A6X573 DNA topoisomerase n=1 Tax=Ochrobactrum anthropi ATCC 49188 RepID=A6X573_OCHA4 Length = 885 Score = 110 bits (275), Expect = 8e-23 Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F + + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKDVLRDFWRDFSGNVDDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C G L K+ ++GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGSDPRSCPTCGTGMLSLKLGKYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 D ++ +EPK LG + + E+I ++G +G YVQ GE G KRAS+P Sbjct: 639 -GGDANGESAAADEPKSLGKDPFTGEEITARTGRFGPYVQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 VD++ E A+ LL Sbjct: 695 VDTLDHEKAVALL 707 [91][TOP] >UniRef100_A3PHZ5 DNA topoisomerase n=1 Tax=Rhodobacter sphaeroides ATCC 17029 RepID=A3PHZ5_RHOS1 Length = 884 Score = 110 bits (275), Expect = 8e-23 Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTAD+E ELD+VSAG +K +L +W F + T+++ I +V L+ Sbjct: 518 FRKYVEYDFTADLEGELDDVSAGERNYKEVLARFWRDFSAAVAETADLRIGEVLDKLDDF 577 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +L+ PD S R+CP+C G L K +R G G FIGC +P C+Y + D Sbjct: 578 LAPHLYPPRPDGSDPRICPTCGSGRLHLKTAR-GGGAFIGCGNYPDCRYTRPISVTGD-- 634 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 ++N + KLLG + I L+SG +G YVQ GE + P RAS+P Sbjct: 635 ------EENAISPDGKLLGHDE-DGAPISLRSGRFGPYVQKGEVTAEVPKPPRASLPKGW 687 Query: 533 DVDSITLEDALVLL 574 D++ L+ AL+LL Sbjct: 688 APDTVDLDRALMLL 701 [92][TOP] >UniRef100_Q2YKM3 DNA topoisomerase n=4 Tax=Brucella abortus RepID=Q2YKM3_BRUA2 Length = 877 Score = 110 bits (275), Expect = 8e-23 Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEILRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGRDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEQITARTGRFGPYIQRGE---GKEAKRASLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [93][TOP] >UniRef100_Q6FZS1 DNA topoisomerase n=1 Tax=Bartonella quintana RepID=Q6FZS1_BARQU Length = 853 Score = 110 bits (274), Expect = 1e-22 Identities = 63/193 (32%), Positives = 100/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTAD+E +LD +S G WK +L ++W F + + I V +L Sbjct: 529 FNRYVEYGFTADLEEKLDLISDGKLSWKDVLRNFWDGFNASITNIQELRITNVLDVLNIT 588 Query: 182 FADYLFGSLPDKSRV--CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D + V CP C+ G L K+ R+GA F+GC +P CKY T D Sbjct: 589 LAPLIFPGREDGNNVRSCPLCSSGQLSLKLGRYGA--FVGCSNYPECKY---TRQLGTDP 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 EE +N +EP +LG + + + + L++G +G Y+Q+GE ++ KR +P Sbjct: 644 GEEKEVMRN---DEPVMLGIDPKTGKDVSLRNGRFGPYIQVGEQKEA---KRVRLPKEWQ 697 Query: 536 VDSITLEDALVLL 574 + +TL+ AL L+ Sbjct: 698 TEKMTLDKALALI 710 [94][TOP] >UniRef100_Q2G7D0 DNA topoisomerase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G7D0_NOVAD Length = 859 Score = 110 bits (274), Expect = 1e-22 Identities = 71/195 (36%), Positives = 99/195 (50%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA ME ELD+VS G +WK +L D+W FK + +V L++ Sbjct: 513 FPRYVAYEFTAGMEEELDDVSGGRAEWKKVLADFWRDFKPKSDEVMEKKPSEVTAELDEF 572 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY--SSD 349 +DYLF D + R+CP C EG L + R+GA F+ C +P CKY K +D Sbjct: 573 LSDYLFPPRADGTDPRLCPKCEEGRLSLRGGRYGA--FVACSNYPECKYTRKFAQPGGAD 630 Query: 350 DDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHV 529 D ED LG + + +++ K+G +G Y+QLG+ G KRAS+P Sbjct: 631 GDGGED-----------GALGKDPETGLEVVRKAGRFGPYIQLGD---GKEAKRASIP-- 674 Query: 530 KDVDSITLEDALVLL 574 KD+ + LE AL LL Sbjct: 675 KDIGELDLEWALKLL 689 [95][TOP] >UniRef100_UPI0001B481FA DNA topoisomerase I n=1 Tax=Brucella sp. 83/13 RepID=UPI0001B481FA Length = 886 Score = 109 bits (273), Expect = 1e-22 Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 537 FERYVEYDFTADLEEKLDLISDGKLSWKEVLRDFWRAFSGSVEDIKELRVTNVLDALNEE 596 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R CP+C G L K+ R+GA F+GC +P CKY + Sbjct: 597 LAPLVFPAREDGSDPRSCPTCGTGVLSLKLGRYGA--FVGCSNYPECKYTRQL------- 647 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KRAS+P Sbjct: 648 -GGEANGETAASDEPKPLGKDPFTGEEITARTGRFGPYIQRGE---GKEAKRASLPKGWT 703 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 704 LDTVDHEKAIALL 716 [96][TOP] >UniRef100_B6RA74 DNA topoisomerase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6RA74_9RHOB Length = 931 Score = 109 bits (273), Expect = 1e-22 Identities = 69/207 (33%), Positives = 99/207 (47%), Gaps = 16/207 (7%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +SAG +WK +L D+W F C+ +V L + Sbjct: 527 FNRYVEYDFTASLEDQLDKISAGDLEWKAVLRDFWNPFHEICDEVIKRSNTEVLDALNET 586 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQH--------------PR 313 ++F D S R CP C G L KVSRFGA F+GC + P Sbjct: 587 LKAHVFPDKEDGSDPRKCPKCDTGRLSLKVSRFGA--FVGCSNYNKDKKDGKEPNENPPH 644 Query: 314 CKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRK 493 C Y + D D + P++LG + + ++ L++G +G YVQLGE+ K Sbjct: 645 CDYTRQLTSGGDSD-------AGAAADGPQVLGIDPETGLEVSLRTGRFGPYVQLGEEAK 697 Query: 494 GYTPKRASVPHVKDVDSITLEDALVLL 574 PKR+S+P V + LE AL LL Sbjct: 698 ---PKRSSLPRGWSVADLDLEKALQLL 721 [97][TOP] >UniRef100_A3VTI0 DNA topoisomerase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTI0_9PROT Length = 876 Score = 109 bits (273), Expect = 1e-22 Identities = 69/196 (35%), Positives = 99/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E LD++S G WK L +W F + E S++ I +V L + Sbjct: 524 FGRYVEYDFTAKLEETLDDISNGEMAWKAFLRRFWDEFHARVEDMSDLRISEVLDALNEA 583 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C EG L KV R+GA FIGC ++P CK+ S Sbjct: 584 LGPHIFPQREDGRPPRECPTCGEGELSLKVGRYGA--FIGCSRYPECKHTRPLGQS---- 637 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 +Q E + LG + +++ + LKSG +G YVQLGE D K PKR+S+P Sbjct: 638 ------EQGNAPAEDRQLGVDPDTSQAVWLKSGRFGPYVQLGEPDPDTK-EKPKRSSIPK 690 Query: 527 VKDVDSITLEDALVLL 574 D S+ + A+ LL Sbjct: 691 SWDAASLDFDKAMKLL 706 [98][TOP] >UniRef100_Q92QL9 DNA topoisomerase n=1 Tax=Sinorhizobium meliloti RepID=Q92QL9_RHIME Length = 900 Score = 109 bits (272), Expect = 2e-22 Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +SAG WK +L D+W F S E T + + V L ++ Sbjct: 537 FTRYVEYDFTASLEEKLDQISAGELNWKDVLRDFWKDFFSQIEDTKELRVTNVLDALNEE 596 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D R+C C G L K+ ++GA F+GC +P C Y + SSD + Sbjct: 597 LAPLVFPKREDGGDPRICQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQ--LSSDSN 652 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + N EP+ LG + + E+I L++G +G YVQ G+ G KRAS+P Sbjct: 653 GDAEAAAAN----EPQSLGKDPHTGEEITLRNGRFGPYVQRGD---GKEAKRASLPKGWT 705 Query: 536 VDSITLEDALVLL 574 +I E AL LL Sbjct: 706 PAAIDHEKALALL 718 [99][TOP] >UniRef100_A6U807 DNA topoisomerase n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6U807_SINMW Length = 914 Score = 109 bits (272), Expect = 2e-22 Identities = 68/193 (35%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +SAG WK +L D+W F S E T + + V L ++ Sbjct: 551 FTRYVEYDFTASLEEKLDRISAGELNWKDVLRDFWKDFFSQIEDTKELRVTNVLDALNEE 610 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D R+C C G L K+ ++GA F+GC +P C Y + SSD Sbjct: 611 LAPLVFPKREDGGDPRICQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQ--LSSDSS 666 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + N EP+ LG + + E+I L++G +G YVQ G+ G KRAS+P Sbjct: 667 GDAEAAASN----EPQSLGKDPHTGEEITLRNGRFGPYVQRGD---GKEAKRASLPKGWT 719 Query: 536 VDSITLEDALVLL 574 +I E AL LL Sbjct: 720 PATIDHEKALALL 732 [100][TOP] >UniRef100_Q578A3 DNA topoisomerase n=1 Tax=Brucella abortus RepID=Q578A3_BRUAB Length = 877 Score = 108 bits (271), Expect = 2e-22 Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F E + + V L ++ Sbjct: 528 FERYVEYDFTADLEEKLDLISDGKLSWKEILRDFWRAFSGSVEDIKELRVTNVLDALNEE 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D R CP+C GTL K+ R+GA F+GC +P CKY + Sbjct: 588 LAPLVFPAREDGRDPRSCPTCGTGTLSLKLGRYGA--FVGCSNYPECKYTRQL------- 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + +EPK LG + + E+I ++G +G Y+Q GE G KR S+P Sbjct: 639 -GGEANGETAASDEPKPLGKDPFTGEQITARTGRFGPYIQRGE---GKEAKRTSLPKGWT 694 Query: 536 VDSITLEDALVLL 574 +D++ E A+ LL Sbjct: 695 LDTVDHEKAIALL 707 [101][TOP] >UniRef100_A9CJ93 DNA topoisomerase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CJ93_AGRT5 Length = 892 Score = 108 bits (270), Expect = 3e-22 Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ +Y FTA +E +LD +SAG WK +L D+W F + E T + + V L + Sbjct: 531 FTKYVEYDFTAALEEKLDRISAGELDWKQVLRDFWKDFFAQIEDTKELRVTNVLDALNEV 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C Y T + D Sbjct: 591 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPECNY---TRQLTSDG 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E D N EPK LG + + E++ L+SG +G Y+Q G+ G KR+S+P Sbjct: 646 AEADAAASN----EPKALGADPMTGEELTLRSGRFGPYIQRGD---GKEAKRSSLPKGWK 698 Query: 536 VDSITLEDALVLL 574 + I E AL L+ Sbjct: 699 PEDIDHEKALALI 711 [102][TOP] >UniRef100_Q017B0 DNA topoisomerase n=1 Tax=Ostreococcus tauri RepID=Q017B0_OSTTA Length = 1006 Score = 108 bits (270), Expect = 3e-22 Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 49/239 (20%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F DY FTA++E +LD ++A +W+ LL ++WT FK+ S + + +V L++K Sbjct: 582 FETYVDYGFTANLEQKLDEITAENVQWRPLLEEWWTPFKNQISSLSTLRVSEVIDALDEK 641 Query: 182 FADYLFGSL---------PDK--------------------SRVCPSCTEGTLIFKVSRF 274 +LFG PD+ +R CPSC G L K S+ Sbjct: 642 LGQHLFGEEKYDGYVHVNPDQVSDVGDGTTTSTNDAQEVSDARKCPSCKTGRLGLKPSKS 701 Query: 275 GAGYFIGCDQHPRCKYI-------AKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNE 433 G FIGC ++P C + + +DD D + + + PK+LG + + Sbjct: 702 GG--FIGCSRYPECGFTHPLHPIRGAIVSDTDDADFMASDASSDVLLYPKILGVDPETGS 759 Query: 434 KILLKSGPYGIYVQLGED------------RKGYTPKRASVPHV-KDVDSITLEDALVL 571 +I L+ GPYG Y+QLGE +K P+R V ++ KDV +TLEDA+ L Sbjct: 760 EISLRLGPYGPYLQLGEKAAPVVSEDGKKAKKPPAPRRVGVANIEKDVSELTLEDAVRL 818 [103][TOP] >UniRef100_Q2GG88 Topoisomerase DNA-binding C4 zinc finger domain protein n=2 Tax=Ehrlichia chaffeensis RepID=Q2GG88_EHRCR Length = 260 Score = 108 bits (269), Expect = 4e-22 Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 1/176 (0%) Frame = +2 Query: 50 LDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKKFADYLFGS-LPDKSRV 226 +D +S G WK +L +W F + +V K++ + +Y+F S + SRV Sbjct: 1 MDLISNGKINWKEVLHQFWFLFIDNVNSVKKLEFTEVLKVISCEMENYIFSSDKSESSRV 60 Query: 227 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 406 CP C +GTL +S+ G F+GC ++P CKY K + S DD ++T + PK+ Sbjct: 61 CPVCNDGTLELNISK--NGIFLGCSKYPECKY-TKNVGSGIVDDTDNT-------QYPKI 110 Query: 407 LGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVDSITLEDALVLL 574 LG ++ + ++I LK GPYG+Y+Q+G D+ G KRA++P D + + L+ A +L Sbjct: 111 LGIDAATGQEIYLKKGPYGLYLQIGNDKSG---KRAAIPKNIDANLLDLQMAEKIL 163 [104][TOP] >UniRef100_C3MA93 DNA topoisomerase n=1 Tax=Rhizobium sp. NGR234 RepID=C3MA93_RHISN Length = 890 Score = 107 bits (268), Expect = 5e-22 Identities = 68/193 (35%), Positives = 99/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +SAG WK +L ++W F S E T + + V L ++ Sbjct: 531 FTRYVEYDFTASLEEKLDQISAGELNWKDVLREFWKDFFSQIEDTKELRVTNVLDALNEE 590 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D R C C G L K+ ++GA F+GC +P C Y + SSD + Sbjct: 591 LAPLVFPKREDGGDPRTCQVCGTGKLSLKLGKYGA--FVGCSNYPECNYTRQ--LSSDSN 646 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + N EP+ LG + + E+I L+SG +G YVQ G+ G KRAS+P Sbjct: 647 GDAEAAVSN----EPQSLGKDPHTGEEITLRSGRFGPYVQRGD---GKDAKRASLPKGWT 699 Query: 536 VDSITLEDALVLL 574 +I E AL LL Sbjct: 700 PATIDHEKALALL 712 [105][TOP] >UniRef100_B0UIR7 DNA topoisomerase n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UIR7_METS4 Length = 913 Score = 107 bits (267), Expect = 7e-22 Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S W+ +L D+W F + T + +V + L + Sbjct: 527 FQRYVEYDFTADLEEQLDRISNAEIDWREVLRDFWRDFSAALAGTKELRTAEVLEALNQL 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C GTL K+ +FGA F+GC +P CKY + + D Sbjct: 587 LGPHIFPPRADGANPRACPNCAGGTLSLKLGKFGA--FVGCSNYPECKYTRQLSAAGLDG 644 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 D E + + ++LG + + + L+ G +G +VQLGE ++ PKR+S+P Sbjct: 645 DGEGSAGEGGQ-PGVRVLGEDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPR 703 Query: 527 VKDVDSITLEDALVLL 574 +TLE AL LL Sbjct: 704 GLTPADVTLETALKLL 719 [106][TOP] >UniRef100_B6B192 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B192_9RHOB Length = 867 Score = 107 bits (267), Expect = 7e-22 Identities = 73/198 (36%), Positives = 99/198 (50%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E++LD+VSAG +K LLG +W F + TS + I +V +L+ Sbjct: 518 FRQYVGYDFTADLESQLDDVSAGEADYKKLLGKFWRDFHAAISETSELRISEVLDVLDAA 577 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D + RVCP C G L K SR G F+GC +P C Y D Sbjct: 578 LAPQLYPPREDGTDPRVCPKCGLGNLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGADG 635 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 +E+ LLG + G ++I LKSG +G YVQ GE + PKR S+P + Sbjct: 636 EEQ-------------LLGTDEG--DEIWLKSGRFGPYVQRGEVTPENKKPKRTSLPQAR 680 Query: 533 ----DVDSITLEDALVLL 574 D TLE A+ LL Sbjct: 681 HGGWDKADTTLEKAIKLL 698 [107][TOP] >UniRef100_B4WD40 DNA topoisomerase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WD40_9CAUL Length = 875 Score = 107 bits (267), Expect = 7e-22 Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +ET LD VSAG WK LL ++W+ F + + + + L + Sbjct: 526 FRKWVEYDFTAALETRLDEVSAGQLDWKVLLREFWSDFHAATQAAGELRTTAILDALNES 585 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F + D S R CP C +G L K SRFGA FIGC+++P CKY S +D Sbjct: 586 LGAHIFPAKEDGSDPRECPLCHQGQLSLKTSRFGA--FIGCERYPDCKYTRPVASPSAED 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 ++ + LG + + + + LK G +G YV++ +G PKR+S+P Sbjct: 644 GSAESGDRE--------LGMDPETGQPVQLKIGRFGPYVEI-TPPEGDKPKRSSLPKGWS 694 Query: 536 VDSITLEDALVLL 574 S+TL+ AL LL Sbjct: 695 PASLTLDQALRLL 707 [108][TOP] >UniRef100_Q6N559 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris RepID=Q6N559_RHOPA Length = 911 Score = 107 bits (266), Expect = 9e-22 Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +S WK +L D+W F + ++ + QV +L++ Sbjct: 528 FTRYVEYDFTAGLEEDLDRISNNEVSWKQVLSDFWRDFIGAVDEIKDLRVAQVLDVLDEM 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ + D R CPSC G L K +FGA F+GC +P C+Y S D Sbjct: 588 LGPHIYPAREDGGDPRQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPLASDSAGD 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 + ++LG + S ++ +KSG +G Y+QLGE + +G PKRA +P Sbjct: 646 AD-------------RVLGTDPDSGLEVAVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPK 692 Query: 527 VKDVDSITLEDALVLL 574 + LE AL LL Sbjct: 693 GTSPSDVDLEMALKLL 708 [109][TOP] >UniRef100_C6XL73 DNA topoisomerase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XL73_HIRBI Length = 865 Score = 107 bits (266), Expect = 9e-22 Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 9/200 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ Y FTA++E +LD VS G +WK L ++W +F + + V +L Sbjct: 517 FNQYVQYDFTAELEEKLDLVSDGKLEWKVFLAEFWKQFSLKIAEVMELRVTNVLDLLNDV 576 Query: 182 FADYLFGSLPDKS---------RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKT 334 +F D+ R+CP C EG L K+ R GA FIGC +P CK+ Sbjct: 577 LGPKIFPPKLDEKTGEPTGEDPRLCPLCKEGQLSMKLGRNGA--FIGCSNYPECKHTRP- 633 Query: 335 LYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRA 514 +++D D ED + KLLG + + + I L++G +G YVQLGE PKR Sbjct: 634 -FTTDGSDAEDAVSP-----DGKLLGQDPETGKDISLRTGRFGPYVQLGEGIGKEKPKRG 687 Query: 515 SVPHVKDVDSITLEDALVLL 574 S+P D +TL A+ L+ Sbjct: 688 SIPKGWKADELTLAQAIQLI 707 [110][TOP] >UniRef100_B8IL44 DNA topoisomerase n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IL44_METNO Length = 888 Score = 107 bits (266), Expect = 9e-22 Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S W+ +L D+W F + T + +V + L + Sbjct: 527 FRRYVEYDFTADLEEQLDRISNAEIDWRAVLRDFWRDFSAAIAGTKELRTAEVLEALNQL 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C GTL K+ +FGA F+GC +P CKY + L ++ + Sbjct: 587 LGPHIFPPRADGANPRACPNCASGTLSLKLGKFGA--FVGCSNYPECKY-TRQLSAAGVE 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E D ++LG + + + L+ G +G +VQLGE ++ PKR+S+P Sbjct: 644 GEGDGSSGEGGQPGQRVLGEDPATGLPVTLREGRFGPFVQLGEASAEKGAEKPKRSSLPR 703 Query: 527 VKDVDSITLEDALVLL 574 ++LE AL LL Sbjct: 704 GLSPAEVSLETALKLL 719 [111][TOP] >UniRef100_A1UT28 DNA topoisomerase n=1 Tax=Bartonella bacilliformis KC583 RepID=A1UT28_BARBK Length = 869 Score = 107 bits (266), Expect = 9e-22 Identities = 66/193 (34%), Positives = 97/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA++E +LD +S G WK +L D+W F + + I V +L Sbjct: 529 FNRYVEYGFTANLEEKLDLISDGKLFWKDVLRDFWDEFNASVTNIQELRITNVLDVLNTT 588 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A F + D S R C C G L K+ R+GA F+GC +P CKY T D Sbjct: 589 LAPLAFPTREDSSDPRSCSLCKHGQLSLKLGRYGA--FVGCSNYPECKY---TKQLGTDA 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 EE N +EP +LG + + + I L++G +G Y+QLGE G KR+ +P Sbjct: 644 GEEREAAHN---DEPVILGVDPETGKDIFLRNGRFGPYIQLGE---GKEAKRSGLPKGWK 697 Query: 536 VDSITLEDALVLL 574 +++ L+ AL LL Sbjct: 698 TENVNLDKALSLL 710 [112][TOP] >UniRef100_B9JVI0 DNA topoisomerase n=1 Tax=Agrobacterium vitis S4 RepID=B9JVI0_AGRVS Length = 904 Score = 106 bits (264), Expect = 1e-21 Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTAD+E +LD +SAG WK +L ++W F + E T + + V L + Sbjct: 531 FTRYVEYDFTADLEEKLDKISAGELNWKDVLREFWQNFFAQIEGTKELRVTNVLDALNEA 590 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S R+C C G L K+ ++GA F+GC +P C + + S+D Sbjct: 591 LAPLVFPKREDGSDPRICQVCGTGNLSLKLGKYGA--FVGCSNYPECNFTRQ--LSADGG 646 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E + EPK LG + + E+I L+SG +G YVQ G+ G KR+S+P Sbjct: 647 TEAE-----AVGNEPKALGEDPTTGEQITLRSGRFGPYVQRGD---GKEAKRSSLPKGWS 698 Query: 536 VDSITLEDALVLL 574 + + AL LL Sbjct: 699 PTDVDFDKALSLL 711 [113][TOP] >UniRef100_B1ZKT9 DNA topoisomerase n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZKT9_METPB Length = 909 Score = 106 bits (264), Expect = 1e-21 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS W+ +L D+W F + T + + +V + L Sbjct: 527 FKRYVEYDFTASLEEQLDRVSNAEIDWRSVLRDFWRDFSAAIGGTKELRVAEVLEALNGL 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C G L K+ +FGA FIGC +P CKY + L +S + Sbjct: 587 LGPHIFPEKADGGDPRACPTCGSGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVE 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E D ++LG + + + L+ G +G +VQLGE ++ PKR+S+P Sbjct: 644 GEGDGSSAEGGQPGVRVLGDDPATGLPVTLRDGRFGPFVQLGEASSEKGAEKPKRSSLPK 703 Query: 527 VKDVDSITLEDALVLL 574 S+TLE AL LL Sbjct: 704 GTSPGSVTLEIALRLL 719 [114][TOP] >UniRef100_B3CTT6 DNA topoisomerase n=1 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CTT6_ORITI Length = 788 Score = 105 bits (263), Expect = 2e-21 Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E +LD+++ G+ +W+ +L ++WT F + + I + +E Sbjct: 521 FKKYVEYDFTAKLEDQLDSIAKGMIEWQEILKNFWTGFNNNVQEIEQYKITDIIPQIETL 580 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++LF + D++ ++C C G L K+S++GA F+ CD +P C + + +++ Sbjct: 581 LSNFLFPAQNDETDHKLCTLCKVGKLSLKLSKYGA--FLACDNYPSCNFTRNIAAAFENN 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED--RKGYTPKRASVPHV 529 D + N K +G++ + I LK GP+G Y+Q GED K PKR + + Sbjct: 639 DNLPKGKNN------KAIGYSDDMQKTIYLKEGPFGWYIQAGEDSTNKNDKPKRVPISVI 692 Query: 530 -KDVDSITLEDALVLL 574 ITLE A+ LL Sbjct: 693 SSSPQDITLETAVKLL 708 [115][TOP] >UniRef100_Q0FRU2 DNA topoisomerase n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FRU2_9RHOB Length = 906 Score = 105 bits (263), Expect = 2e-21 Identities = 71/201 (35%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E ELD VSAG +K LLG +W F + TS + I +V +L++ Sbjct: 546 FRTYVGYEFTAELENELDEVSAGEMDYKALLGKFWRDFSAAISETSELRISEVLDVLDEA 605 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R+CP C +G L K SR G F+GC +P C Y + Sbjct: 606 LAPQLYPPREDGSDPRICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEG 663 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVK 532 +E K+LG + ++I LK+G +G YVQ GE + P RAS+P + Sbjct: 664 EE-------------KMLGLD--GEDEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKAR 708 Query: 533 D-------VDSITLEDALVLL 574 D +TLE AL LL Sbjct: 709 GNFLPGWAPDDMTLEKALTLL 729 [116][TOP] >UniRef100_UPI0000384A7F COG0550: Topoisomerase IA n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384A7F Length = 895 Score = 105 bits (262), Expect = 2e-21 Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 16/195 (8%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y+FTAD+E +LD++S G +W+ +L +W F + T ++ + QV L++ Sbjct: 526 FGRYVEYNFTADLENQLDDISGGRDEWRKVLDRFWRDFSGAVDETKDLRVAQVLDALDEL 585 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 + F PD R CP+C G L K+ +FGA FIGC +P C++ + L + Sbjct: 586 LGPHFF---PDNGTGHDPRSCPTCNAGRLSLKLGKFGA--FIGCSAYPECRF-TRPLTTG 639 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED-----------RK 493 + +EE E PK LG + S + L+ GPYG YVQLG++ K Sbjct: 640 GEGEEE-------VREGPKELGNDPASGLPVSLRKGPYGHYVQLGDESTMKAEPAPVPEK 692 Query: 494 GYTPKRASVPHVKDV 538 G K A P K V Sbjct: 693 GKKAKAAKTPKPKRV 707 [117][TOP] >UniRef100_C5AYF9 DNA topoisomerase n=1 Tax=Methylobacterium extorquens AM1 RepID=C5AYF9_METEA Length = 910 Score = 105 bits (262), Expect = 2e-21 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS W+ +L D+W F + T + + +V + L Sbjct: 527 FKRYVEYDFTASLEEQLDRVSNAEIDWRSVLRDFWRDFSAAIGGTKELRVAEVLEALNGL 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C G L K+ +FGA FIGC +P CKY + L +S + Sbjct: 587 LGPHIFPEKADGGDPRACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVE 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E D ++LG + + + L+ G +G +VQLGE ++ PKR+S+P Sbjct: 644 GEGDGSSAEGGQPGVRVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPK 703 Query: 527 VKDVDSITLEDALVLL 574 S+TLE AL LL Sbjct: 704 GTTPGSVTLEIALRLL 719 [118][TOP] >UniRef100_B7KW94 DNA topoisomerase n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KW94_METC4 Length = 910 Score = 105 bits (262), Expect = 2e-21 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS W+ +L D+W F + T + + +V + L Sbjct: 527 FKRYVEYDFTASLEEQLDRVSNAEIDWRSVLRDFWRDFSAAIGGTKELRVAEVLEALNGL 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C G L K+ +FGA FIGC +P CKY + L +S + Sbjct: 587 LGPHIFPEKADGGDPRACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVE 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E D ++LG + + + L+ G +G +VQLGE ++ PKR+S+P Sbjct: 644 GEGDGSSAEGGQPGVRVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPK 703 Query: 527 VKDVDSITLEDALVLL 574 S+TLE AL LL Sbjct: 704 GMTPGSVTLEIALRLL 719 [119][TOP] >UniRef100_A9W733 DNA topoisomerase n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W733_METEP Length = 910 Score = 105 bits (262), Expect = 2e-21 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS W+ +L D+W F + T + + +V + L Sbjct: 527 FKRYVEYDFTASLEEQLDRVSNAEIDWRSVLRDFWRDFSAAIGGTKELRVAEVLEALNGL 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C G L K+ +FGA FIGC +P CKY + L +S + Sbjct: 587 LGPHIFPEKADGGDPRACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVE 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E D ++LG + + + L+ G +G +VQLGE ++ PKR+S+P Sbjct: 644 GEGDGSSAEGGQPGVRVLGEDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPK 703 Query: 527 VKDVDSITLEDALVLL 574 S+TLE AL LL Sbjct: 704 GMTPGSVTLEIALRLL 719 [120][TOP] >UniRef100_A7HX05 DNA topoisomerase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HX05_PARL1 Length = 894 Score = 105 bits (262), Expect = 2e-21 Identities = 64/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA++E +LD VSAG WK LL ++W F + I +V L + Sbjct: 526 FTRYVEYDFTAELEEKLDKVSAGELDWKDLLREFWKEFTVNVAEALELRITEVLDRLNEV 585 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D S R CPSC G L KV RFGA F+GC +P CK+ + ++ + Sbjct: 586 LGPHVFPEKEDGSNPRACPSCGNGILSLKVGRFGA--FVGCSNYPDCKFTRQLTVGAEGE 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQ---LGEDRKGYTPKRASVPH 526 ++ ++LG + + ++ LK+G +G YV+ LG+D K PKR+ +P Sbjct: 644 EQAG----------DRVLGTDPETGAEVSLKTGRFGPYVERAPLGDDEK---PKRSGLPA 690 Query: 527 VKDVDSITLEDALVLL 574 + L+ AL LL Sbjct: 691 KMSAADVDLDTALRLL 706 [121][TOP] >UniRef100_C7CD03 DNA topoisomerase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CD03_METED Length = 910 Score = 105 bits (262), Expect = 2e-21 Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS W+ +L D+W F + T + + +V + L Sbjct: 527 FKRYVEYDFTASLEEQLDRVSNAEIDWRSVLRDFWRDFSAAIGGTKELRVAEVLEALNGL 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D R CP+C G L K+ +FGA FIGC +P CKY + L +S + Sbjct: 587 LGPHIFPEKADGGDPRACPTCGAGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVE 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 E D ++LG + + + L+ G +G +VQLGE ++ PKR+S+P Sbjct: 644 GEGDGSSAEGGQPGVRVLGDDPATGLPVTLRDGRFGPFVQLGEASAEKGAEKPKRSSLPK 703 Query: 527 VKDVDSITLEDALVLL 574 S+TLE AL LL Sbjct: 704 GMTSGSVTLEIALRLL 719 [122][TOP] >UniRef100_B9NPP1 DNA topoisomerase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NPP1_9RHOB Length = 873 Score = 105 bits (261), Expect = 3e-21 Identities = 71/194 (36%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E +LD+VSAG +K LLG +W F + TS + I +V L++ Sbjct: 541 FRQYVGYEFTANLEEQLDDVSAGDRDYKDLLGKFWRDFSAAIGETSELRISEVLDKLDEA 600 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R+CP C G L K SR G F+GC +P C Y + Sbjct: 601 LAPQLYPPREDGSDPRICPKCGMGQLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEG 658 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVK 532 DE +LLG ++G ++I LKSG +G YVQ GE + P RAS+P Sbjct: 659 DE-------------RLLGEDAG--DEIWLKSGRFGPYVQRGEPTPENKKPPRASLPRGW 703 Query: 533 DVDSITLEDALVLL 574 D + L AL LL Sbjct: 704 SKDDMDLGKALTLL 717 [123][TOP] >UniRef100_B6JFU9 DNA topoisomerase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JFU9_OLICO Length = 913 Score = 104 bits (260), Expect = 4e-21 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ ++ FTAD+E +LD +S WK +L D+W F + +V + +V +L+ Sbjct: 528 FARYVEFDFTADLEEQLDKISNNEVAWKNVLSDFWRDFIGAVDEIKDVKVSEVLDVLDAM 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++++ D R CPSC G L K +FGA F+GC +P C+Y SS Sbjct: 588 LGEHIYEPRADGGDPRQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRYTRPLAASSGTS 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D ++LG + +N + +K+G +G Y+QLGE +G PKRA +P Sbjct: 646 D--------------RVLGKDPKTNLDVAVKAGRFGPYIQLGEPNDYAEGEKPKRAGIPK 691 Query: 527 VKDVDSITLEDALVLL 574 + L+ A+ LL Sbjct: 692 NMSPADVELDLAIKLL 707 [124][TOP] >UniRef100_C6XHN6 DNA topoisomerase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XHN6_LIBAP Length = 837 Score = 104 bits (260), Expect = 4e-21 Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS+ +Y FTAD+E +LD +S G WK +L ++W F + + I V +L Sbjct: 528 FSQYVEYDFTADLEEKLDEISTGKLNWKEVLHEFWEEFIEKIDSIKKLRISNVLDILNDT 587 Query: 182 FADYLFGSLP--DKSRVCPSCTEGTLIFKV-SRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 + +F + SR CP C +L K+ S++GA F+GC +P CKY + Sbjct: 588 LSSVIFPPKENNEDSRTCPECHTHSLSLKLSSKYGA--FVGCTNYPECKYTRQL------ 639 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 PQ ++E LLG + + E + L+SG +G+YVQ G+ G KR S+P Sbjct: 640 ---TSNPQDIPEMKESVLLGNDLETKESVTLRSGRFGLYVQRGD---GKDAKRCSLPKTW 693 Query: 533 DVDSITLEDALVLL 574 DS+ + A+ LL Sbjct: 694 KSDSVDYDKAMSLL 707 [125][TOP] >UniRef100_C7DBD0 DNA topoisomerase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBD0_9RHOB Length = 881 Score = 104 bits (259), Expect = 6e-21 Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD+VSAG +K +LG +W F + TS + I +V + + + Sbjct: 518 FRKYIGYGFTADLEGQLDDVSAGEADYKDVLGRFWRDFSAAIGETSELRITEVLEKINEV 577 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D S R+CP+C EG L + +R G G FIGC ++P C+Y + + Sbjct: 578 LEPHLFPPTEDGSDPRLCPNCNEGRLSMRTARSG-GAFIGCSRYPDCRY-TRAFGPPGTE 635 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 E P E K+LG ++G +KI + G +G Y Q GE P R SVP Sbjct: 636 PESAIP------PEGKILGEDAG--DKIWIHKGRFGPYAQRGEVTEDNKKPPRQSVPADW 687 Query: 533 DVDSITLEDALVLL 574 + +TLE A+ LL Sbjct: 688 APEDVTLETAVKLL 701 [126][TOP] >UniRef100_A4EQ09 DNA topoisomerase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EQ09_9RHOB Length = 894 Score = 104 bits (259), Expect = 6e-21 Identities = 74/198 (37%), Positives = 97/198 (48%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E ELD+VSAG +K LLG +W F + TS++ I +V +L+ Sbjct: 538 FRTYVGYEFTANLEGELDDVSAGSRDYKELLGRFWRDFSAAISETSDLRITEVLDVLDDA 597 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S RVCP C G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGSDPRVCPKCGAGQLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 +E KLLG S ++I LK G YG YVQ GE + PKR+S+P + Sbjct: 656 EE-------------KLLG--SDGEDEIWLKDGRYGPYVQRGEATPENKKPKRSSLPQTR 700 Query: 533 ----DVDSITLEDALVLL 574 + TLE AL LL Sbjct: 701 HGGWPKEETTLERALQLL 718 [127][TOP] >UniRef100_A3TZ47 DNA topoisomerase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZ47_9RHOB Length = 867 Score = 103 bits (258), Expect = 7e-21 Identities = 69/194 (35%), Positives = 101/194 (52%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTAD+E ELD+VSAG +K +LG +W F + TS + I +V + + + Sbjct: 517 FRKYVEYDFTADLEEELDDVSAGDRDYKDVLGRFWRDFSAAIAETSELRITEVLEKINEV 576 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D S R+CP C G L + +R G G FIGC +P C+Y + D Sbjct: 577 LEPHLFPPTEDGSDPRLCPHCGAGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDA 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + E + E KLLG + G ++I + G +G YVQ GE + P R SVP Sbjct: 634 EAE----ASAIPPEGKLLGVDDG--DEIRVFKGRFGPYVQRGEVTEENKKPPRQSVPKDW 687 Query: 533 DVDSITLEDALVLL 574 + +TLE ++LL Sbjct: 688 VPEDLTLEQGVMLL 701 [128][TOP] >UniRef100_A7P531 DNA topoisomerase n=1 Tax=Vitis vinifera RepID=A7P531_VITVI Length = 933 Score = 103 bits (257), Expect = 9e-21 Identities = 47/53 (88%), Positives = 48/53 (90%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQV 160 FSEVTDYSFTADMETELDNVSAGLT+WKGLL DYWTRF YC R SNVHIHQV Sbjct: 874 FSEVTDYSFTADMETELDNVSAGLTEWKGLLKDYWTRFSMYCNRVSNVHIHQV 926 [129][TOP] >UniRef100_Q2W9I9 DNA topoisomerase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W9I9_MAGSA Length = 898 Score = 103 bits (256), Expect = 1e-20 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 5/167 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y+FTAD+E +LD+VS G W+ +L +W F + T ++ + QV L++ Sbjct: 528 FGRYVEYNFTADLENQLDDVSGGRDDWRKVLDRFWRDFSGAVDETKDLRVAQVLDALDEL 587 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 + F PD R CP+C G L K+ +FGA FIGC +P C++ + L + Sbjct: 588 LGPHFF---PDNGTGHDPRSCPTCNAGRLSLKLGKFGA--FIGCSAYPECRF-TRPLTTG 641 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED 487 + +EE E PK LG + S + L+ GPYG YVQLG++ Sbjct: 642 GEGEEE-------VREGPKELGNDPESGLPVTLRKGPYGHYVQLGDE 681 [130][TOP] >UniRef100_B3Q9Y2 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris TIE-1 RepID=B3Q9Y2_RHOPT Length = 911 Score = 103 bits (256), Expect = 1e-20 Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +S WK +L D+W F + ++ + QV +L++ Sbjct: 528 FTRYVEYDFTAGLEEDLDRISNNEVSWKQVLSDFWRDFIGAVDEIKDLRVAQVLDVLDEM 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ + D R CPSC G L K +FGA F+GC +P C+Y D Sbjct: 588 LGPHIYPAREDGGDPRQCPSCGNGRLNLKAGKFGA--FVGCTNYPECRYTRPLAADGGAD 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 + ++LG + + ++ +KSG +G Y+QLGE + +G PKRA +P Sbjct: 646 AD-------------RVLGTDPDTGLEVAVKSGRFGPYIQLGEAKDYGEGEKPKRAGIPK 692 Query: 527 VKDVDSITLEDALVLL 574 + L+ AL LL Sbjct: 693 GTSPSDVELDVALKLL 708 [131][TOP] >UniRef100_D0D7V2 DNA topoisomerase I n=1 Tax=Citreicella sp. SE45 RepID=D0D7V2_9RHOB Length = 918 Score = 103 bits (256), Expect = 1e-20 Identities = 70/201 (34%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E ELD VSAG +K LL +W F + TS + I +V +L++ Sbjct: 555 FRKYVGYEFTAELENELDEVSAGEMDYKSLLAKFWRDFSAAIGETSELRISEVLDVLDEA 614 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R+CP C +G L K SR G F+GC +P C Y D Sbjct: 615 LAPQLYPPREDGSDPRICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGADG 672 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVK 532 +E +LLG + G +++ LK+G +G YVQ GE + P RAS+P Sbjct: 673 EE-------------RLLGSHEG--DEVWLKAGRFGPYVQRGEPTPENKKPPRASLPKKG 717 Query: 533 DV-------DSITLEDALVLL 574 D +TLE A+ LL Sbjct: 718 GAFLPGWSPDDMTLEKAVTLL 738 [132][TOP] >UniRef100_B6IN35 DNA topoisomerase n=1 Tax=Rhodospirillum centenum SW RepID=B6IN35_RHOCS Length = 930 Score = 102 bits (255), Expect = 2e-20 Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y+FTAD+E +LD++S G WK +L ++W +F + E T ++ I QV L++ Sbjct: 529 FPRYVEYTFTADLEGKLDDISGGRIDWKQVLREFWRQFSAAVEDTRDLTITQVLTALDEL 588 Query: 182 FADYLFGSL--PD----KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 343 + F PD +RVCP+C G L K+ + +G FIGC +P C+Y + Sbjct: 589 LGPHFFPRRLGPDGQEVDARVCPTCGTGRLSLKLGK--SGGFIGCSNYPECRYTRPLSVA 646 Query: 344 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASV 520 + + E ++LG + ++ + +K+G +G YVQLG D K PKRAS+ Sbjct: 647 GEGGEAE---------SGDRMLGNDPETSLPVWVKTGRFGAYVQLGNGDGKEEKPKRASL 697 Query: 521 PHVKDVDSITLEDALVLL 574 P ++ L+ AL LL Sbjct: 698 PRGMLPATMDLDTALRLL 715 [133][TOP] >UniRef100_D0CWX9 DNA topoisomerase I n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWX9_9RHOB Length = 871 Score = 102 bits (255), Expect = 2e-20 Identities = 69/194 (35%), Positives = 95/194 (48%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E +LD VSAG +K LL +W F + TS + I +V L++ Sbjct: 543 FRQYVGYEFTANLEEQLDEVSAGARDYKDLLSKFWRDFSAAIAETSELRISEVLDKLDEA 602 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R+CP C G L K SR G F+GC +P C Y + Sbjct: 603 LAPQLYPPREDGSDPRICPKCGVGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEG 660 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 +E +LLG + ++I LKSG +G YVQ GE + P RAS+P Sbjct: 661 EE-------------RLLGVD--GEDEIWLKSGRFGPYVQRGEATPENKKPPRASLPKGW 705 Query: 533 DVDSITLEDALVLL 574 + D + LE AL LL Sbjct: 706 NKDDMDLEKALTLL 719 [134][TOP] >UniRef100_A3VFW8 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VFW8_9RHOB Length = 846 Score = 102 bits (255), Expect = 2e-20 Identities = 70/194 (36%), Positives = 96/194 (49%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E ELD VSAG ++K LL +W F + TS + I +V L+K Sbjct: 522 FRQYVGYEFTADLEEELDKVSAGEIEYKKLLARFWRDFSAAIAETSELRISEVLDKLDKA 581 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 L+ D S R CP C G L K SR +G F+GC +P C+Y ++ Sbjct: 582 LEKQLYPPREDGSDPRKCPLCGTGDLHLKTSR--SGGFVGCSNYPECRYTRP--IGGGEE 637 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + D ++LG + E+I L+SG +G YVQ GE + P RAS+P Sbjct: 638 TQGD-----------RILG-EDENGEEISLRSGRFGPYVQRGEVSEENKKPDRASLPKGW 685 Query: 533 DVDSITLEDALVLL 574 D + LE AL LL Sbjct: 686 SADDMDLEKALTLL 699 [135][TOP] >UniRef100_A3K045 DNA topoisomerase n=1 Tax=Sagittula stellata E-37 RepID=A3K045_9RHOB Length = 889 Score = 102 bits (255), Expect = 2e-20 Identities = 72/201 (35%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E ELD VSAG +K LL +W F + TS++ I +V +L++ Sbjct: 545 FKRYVEYDFTAALEDELDQVSAGAEDYKELLAKFWRDFSAAIAETSDLRISEVLDVLDEA 604 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R+CP C +G L K SR G F+GC +P C Y + Sbjct: 605 LAPQLYPPRDDGSDPRICPKCGQGRLHLKTSRTGG--FVGCGNYPECTYTRPIAGEGAEG 662 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR-KGYTPKRASVPHVK 532 +E KLLG + G ++I LK+G +G YVQ GE + P RAS+P Sbjct: 663 EE-------------KLLGEDQG--DEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKKG 707 Query: 533 -------DVDSITLEDALVLL 574 D +TLE AL LL Sbjct: 708 GAYLPGWDPADMTLEKALTLL 728 [136][TOP] >UniRef100_Q11IM5 DNA topoisomerase n=1 Tax=Chelativorans sp. BNC1 RepID=Q11IM5_MESSB Length = 849 Score = 102 bits (254), Expect = 2e-20 Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S G WK +L D+W F + + + V L ++ Sbjct: 528 FRRYVEYDFTADLEEKLDEISDGKLSWKQVLRDFWKDFSAAVGDIKELRVTDVLDALNEE 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D R+CP C G L K+ R+GA F+GC +P C Y + + Sbjct: 588 LAPLVFPTREDGGDPRICPKCGAGKLSLKLGRYGA--FVGCSNYPECDYTRQL-----GE 640 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + + + + K+LG + + E+I L+SG +G YVQ GE G KRA +P Sbjct: 641 NPAENGEAEAGLNGNKVLGTDPFTGEEITLRSGRFGPYVQRGE---GKDAKRAGLPKGWT 697 Query: 536 VDSITLEDALVLL 574 + + E A+ LL Sbjct: 698 PEDLDHEKAIALL 710 [137][TOP] >UniRef100_B5K6L9 DNA topoisomerase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5K6L9_9RHOB Length = 889 Score = 102 bits (253), Expect = 3e-20 Identities = 67/194 (34%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y +TA +E ELD+VSAG +K +L D+W FK + ++ I QV + + Sbjct: 520 FRKYVGYDYTASLEEELDHVSAGEADYKKVLSDFWGDFKITIDEAMDMSITQVLDKINEV 579 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A ++F + + R+CP+C G L + +R G G FIGC +P CKY + D Sbjct: 580 LAPHIFPPNEEGTDPRLCPNCNVGRLSMRTARSG-GAFIGCSNYPECKY-TRAFGPPGQD 637 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 D P E K LG + G +KI + G +G Y Q GE + P R SVP Sbjct: 638 DASGIP------PEGKELGMDDG--DKIWIHKGRFGPYAQRGEVTEENKKPNRQSVPKEW 689 Query: 533 DVDSITLEDALVLL 574 + +TLE A+ LL Sbjct: 690 PPEDVTLETAVKLL 703 [138][TOP] >UniRef100_Q89K08 DNA topoisomerase n=1 Tax=Bradyrhizobium japonicum RepID=Q89K08_BRAJA Length = 828 Score = 101 bits (252), Expect = 4e-20 Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS +Y FTA++E +LD +S W+ +L D+W F + ++ + QV +L+ Sbjct: 527 FSRYVEYDFTANLEEQLDRISNNEISWQQVLKDFWNGFIGAVDEIKDLRVAQVLDVLDDM 586 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CPSC G L K +FGA F+GC +P C+Y + ++D + Sbjct: 587 LGQHIYPPRADGGDIRQCPSCGNGRLNLKAGKFGA--FVGCSNYPECRYTRQ--LAADSE 642 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D + LG + + + +K+G +G Y+QLGE + +G PKRA +P Sbjct: 643 ATAD-----------RSLGQDPDTGRDVWVKAGRFGPYIQLGEQKDYEEGEKPKRAGIPK 691 Query: 527 VKDVDSITLEDALVLL 574 + LE AL LL Sbjct: 692 GTSPGDVELELALKLL 707 [139][TOP] >UniRef100_A4YWH0 DNA topoisomerase n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YWH0_BRASO Length = 915 Score = 101 bits (252), Expect = 4e-20 Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S W+ +L D+WT F + ++ + QV L++ Sbjct: 527 FRRYVEYDFTADLEEQLDRISNNEIAWQQVLKDFWTGFIGAVDDIKDLRVAQVLDALDEM 586 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CP+C G L K +FGA F+GC +P C+Y ++D + Sbjct: 587 LGPHIYPPREDGGDVRQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRYTRP--LAADSE 642 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D ++LG + S ++ +K+G +G Y+QLGE + +G PKRA +P Sbjct: 643 AAAD-----------RMLGQDPDSGLEVAVKAGRFGPYIQLGEQKDYAEGEKPKRAGIPK 691 Query: 527 VKDVDSITLEDALVLL 574 + L+ AL LL Sbjct: 692 GTQPSDVDLDLALKLL 707 [140][TOP] >UniRef100_A4EEH4 DNA topoisomerase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EEH4_9RHOB Length = 866 Score = 101 bits (252), Expect = 4e-20 Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 6/197 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSAG +K +LG +W F + T+++ I +V + + + Sbjct: 518 FRKYIGYDFTADLENQLDEVSAGDADYKKVLGQFWRDFSAAIAETADLRITEVLEKINEV 577 Query: 182 FADYLF-----GSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 +LF GS P R+CP+C G L + +R G G FIGC +P C+Y + Sbjct: 578 LEPHLFPPTEGGSDP---RLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPN 633 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVP 523 + + P E KLLG + G ++I + G +G Y Q GE PKR S+P Sbjct: 634 PEAELSAIP------PEGKLLGTDEG--DEIRIFKGRFGPYAQRGEVTEDNKKPKRQSIP 685 Query: 524 HVKDVDSITLEDALVLL 574 + + +TL+ AL+LL Sbjct: 686 DGWEPEEVTLDQALMLL 702 [141][TOP] >UniRef100_Q98LX0 DNA topoisomerase n=1 Tax=Mesorhizobium loti RepID=Q98LX0_RHILO Length = 873 Score = 101 bits (251), Expect = 5e-20 Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD +S G WK +L D+W F + + V L ++ Sbjct: 528 FERYVEYDFTASLEEKLDEISDGKLAWKDVLRDFWKDFSGAVADIKELRVTDVLDALNEE 587 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F + D S R+CP C G L K+ +FGA F+GC +P C + + +++ + Sbjct: 588 LAPLVFPAREDGSNPRICPKCGTGNLSLKLGKFGA--FVGCSNYPECSFTRQLGDAANPN 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E T K+LG + + E+I L+SG +G Y+Q G+ G KR+S+P Sbjct: 646 GENGGGDDGT-----KVLGKDPYTAEEITLRSGRFGPYLQRGD---GKDAKRSSLPKGWT 697 Query: 536 VDSITLEDALVLL 574 ++I E AL LL Sbjct: 698 PETIDHEKALALL 710 [142][TOP] >UniRef100_Q135I0 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisB5 RepID=Q135I0_RHOPS Length = 914 Score = 101 bits (251), Expect = 5e-20 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +S W+ +L D+WT F + + + QV +L++ Sbjct: 528 FARYVEYDFTAALEEKLDRISNNEISWQQVLRDFWTDFIGAVDDIKELRVAQVLDVLDEM 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CPSC G L K +FGA F+GC +P C++ Sbjct: 588 LGPHIYAPREDGGDPRQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPLAADGGGG 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D + ++LG + + ++ +KSG +G Y+QLGE + +G PKRA +P Sbjct: 646 DAD------------RVLGIDPDTGFEVAVKSGRFGPYIQLGEAKDYAEGEKPKRAGIPK 693 Query: 527 VKDVDSITLEDALVLL 574 + LE AL LL Sbjct: 694 GTSPSDVELEMALRLL 709 [143][TOP] >UniRef100_Q2GKB4 DNA topoisomerase n=1 Tax=Anaplasma phagocytophilum HZ RepID=Q2GKB4_ANAPZ Length = 811 Score = 100 bits (250), Expect = 6e-20 Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 2/192 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA++E ELD +S G WK +L +W +F S + ++ K + + Sbjct: 523 FRKYVEYDFTANLEEELDLISNGKMVWKEVLSQFWDKFISDVSSVKTIEASEILKAITRD 582 Query: 182 FADYLFGSLPDK--SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +Y F S+ + SRVCP C G L+ + + A F+GC+++P C+Y Sbjct: 583 LENYAFSSVDGESISRVCPQCGSGELMLNIGKTSA--FLGCNRYPECRYT-----RGIGG 635 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 D +P + + ++LG + + E+I LK GPYG Y+QLG K + +++ D Sbjct: 636 DGSASPADDAS----RILGIDEETQEEIFLKRGPYGEYLQLGNSTKRVSLTKSAGEITVD 691 Query: 536 VDSITLEDALVL 571 + L LVL Sbjct: 692 LAKKMLSLPLVL 703 [144][TOP] >UniRef100_B1M0P4 DNA topoisomerase n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1M0P4_METRJ Length = 894 Score = 100 bits (250), Expect = 6e-20 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS W+ +L D+W F + T + + V + L Sbjct: 527 FRRYVEYDFTAGLEEQLDRVSNAEIDWRAVLRDFWRDFSAAIGETKELRVADVLEALNGL 586 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D S R CP+C G L K+ +FGA FIGC +P CKY + L ++ D Sbjct: 587 LGPHIFPDKGDGSNPRTCPTCGSGQLSLKLGKFGA--FIGCSNYPECKY-TRQLSATGID 643 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 + D ++LG + + + L+ G +G ++QLGE ++ PKR+S+P Sbjct: 644 GDGDGSSAEGGQPGVRVLGDDPATGLPVTLRDGRFGPFLQLGEASTEKGAEKPKRSSLPK 703 Query: 527 VKDVDSITLEDALVLL 574 + L AL LL Sbjct: 704 GLSPSDVDLNKALALL 719 [145][TOP] >UniRef100_A5EKR5 DNA topoisomerase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EKR5_BRASB Length = 916 Score = 100 bits (250), Expect = 6e-20 Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+E +LD +S W+ +L D+WT F + ++ + QV L++ Sbjct: 527 FRRYVEYDFTADLEEQLDRISNNEIAWQQVLKDFWTGFIGAVDDIKDLRVAQVLDALDEM 586 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CP+C G L K +FGA F+GC +P C+Y ++D + Sbjct: 587 LGPHIYPPRADGGDVRQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRYTRP--LAADSE 642 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D ++LG + S + +K+G +G Y+QLGE + +G PKRA +P Sbjct: 643 AAAD-----------RILGQDPDSGLDVAVKAGRFGPYIQLGEQKDYAEGEKPKRAGIPK 691 Query: 527 VKDVDSITLEDALVLL 574 + L+ AL LL Sbjct: 692 GTQPSDVDLDLALKLL 707 [146][TOP] >UniRef100_Q2CAE0 DNA topoisomerase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAE0_9RHOB Length = 870 Score = 100 bits (250), Expect = 6e-20 Identities = 70/194 (36%), Positives = 98/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA +E LD+VSAG +K LL +W F E TS + I +V +L+ Sbjct: 519 FRQYVGYEFTAKLEESLDDVSAGERDYKDLLASFWRDFHRAIEETSELRITEVLDVLDDA 578 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D + R CP C EG L K SR G F+GC ++P C+Y T ++ Sbjct: 579 LAPQLYPPREDGTDPRECPLCKEGRLHLKTSRTGG--FVGCSRYPECRY---TRPIGGEE 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 ED ++LG + G ++I L++G +G YVQ GE P RAS+P Sbjct: 634 QSED-----------RVLGVDDG--DEISLRTGRFGPYVQRGEVTEDNKKPPRASLPKGW 680 Query: 533 DVDSITLEDALVLL 574 D++ LE AL LL Sbjct: 681 APDAMDLEKALRLL 694 [147][TOP] >UniRef100_Q167W6 DNA topoisomerase n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q167W6_ROSDO Length = 878 Score = 100 bits (249), Expect = 8e-20 Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSAG +K +LG +W F + T+++ I +V + + + Sbjct: 519 FRKYIGYDFTADLEDQLDTVSAGNADYKEVLGRFWRDFSAAIAETADLRITEVLEKINEV 578 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D S R+CP+C G L + +R G G FIGC +P C+Y ++D Sbjct: 579 LEPHLFPPNEDGSDPRLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPGEED 637 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 D P E KLLG ++KI G +G YVQ GE P R S+P Sbjct: 638 DSGIPP-------EGKLLG--EDGDDKIYAFKGRFGPYVQRGEVTEDNKKPPRQSIPKDW 688 Query: 533 DVDSITLEDALVLL 574 + + L AL LL Sbjct: 689 PPEDVDLPQALKLL 702 [148][TOP] >UniRef100_B5IY09 DNA topoisomerase n=1 Tax=Octadecabacter antarcticus 307 RepID=B5IY09_9RHOB Length = 888 Score = 100 bits (249), Expect = 8e-20 Identities = 67/194 (34%), Positives = 96/194 (49%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y +TA +E ELD+VSAG +K +L D+W FK + ++ I QV + + Sbjct: 519 FRKYVGYDYTASLEEELDHVSAGEADYKKVLSDFWGDFKITIDEAMDMSITQVLDKINEV 578 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A ++F + + R+CP+C G L + +R G G FIGC +P CKY + D Sbjct: 579 LAPHIFPPNEEGTDPRLCPNCNVGRLSMRTARSG-GAFIGCSNYPECKY-TRAFGPPGQD 636 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 D P E K LG + G +KI + G +G Y Q GE P R SVP Sbjct: 637 DASGIP------PEGKELGVDDG--DKIWIHKGRFGPYAQRGEVTEDNKKPNRQSVPKEW 688 Query: 533 DVDSITLEDALVLL 574 + +TLE A+ LL Sbjct: 689 PPEDVTLETAVRLL 702 [149][TOP] >UniRef100_Q07L73 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07L73_RHOP5 Length = 944 Score = 100 bits (248), Expect = 1e-19 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E LD +S W+ +L D+WT F + ++ + QV L+ Sbjct: 553 FARYVEYDFTAALEESLDRISNNEISWQQVLRDFWTDFIGAVDEIKDLRVSQVLDALDTM 612 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CPSC G L K +FGA F+GC +P C+Y ++D Sbjct: 613 LGPHIYAPRDDGGDPRQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRP--LAADGG 668 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 E D ++LG + ++ + +K+G +G Y+QLG+ + +G PKRA +P Sbjct: 669 GEGD-----------RILGKDPETDRDVAVKAGRFGPYIQLGDAKDYGEGEKPKRAGIPK 717 Query: 527 VKDVDSITLEDALVLL 574 + LE AL LL Sbjct: 718 NMSPGDVELELALKLL 733 [150][TOP] >UniRef100_A1AZS7 DNA topoisomerase n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AZS7_PARDP Length = 851 Score = 100 bits (248), Expect = 1e-19 Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E ELD++S+G ++ +L +W F + E TS + I +V +++ Sbjct: 515 FPRYVSYDFTANLEGELDDISSGERAYREVLRRFWRDFTAALEGTSELRITEVLDAIDEA 574 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +L+ D S R CP C +G L K +R G G FIGC +P C++ + + S D + Sbjct: 575 LAPHLYPPRADGSDPRECPLCHKGRLHLKTARSG-GAFIGCSNYPDCRF-TRPISSPDAE 632 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 D +LG ++G ++I LK+G +G YVQ GE + P RAS+P Sbjct: 633 VVGDA-----------VLGVDNG--DEISLKNGRFGPYVQRGEATAENPKPPRASIPKGW 679 Query: 533 DVDSITLEDALVLL 574 D+ S+ LE AL LL Sbjct: 680 DLASVDLERALALL 693 [151][TOP] >UniRef100_A9HBK4 DNA topoisomerase n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HBK4_9RHOB Length = 878 Score = 100 bits (248), Expect = 1e-19 Identities = 66/194 (34%), Positives = 96/194 (49%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSAG +K +LG +W F + T+++ I +V + + + Sbjct: 519 FRKYVGYDFTADLEDQLDTVSAGNADYKEVLGRFWRDFSAAIAETADLRITEVLEKINEV 578 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF + D + R+CP+C G L + +R G G FIGC +P C+Y ++D Sbjct: 579 LEPHLFPANEDGTDPRLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRAFGPPGEED 637 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 D P E KLLG +KI G +G YVQ GE P R S+P Sbjct: 638 DSGIPP-------EGKLLG--EDGEDKIYAFKGRFGPYVQRGEVTEDNKKPPRQSIPKDW 688 Query: 533 DVDSITLEDALVLL 574 + + L AL LL Sbjct: 689 PPEDVDLPQALKLL 702 [152][TOP] >UniRef100_B8GZL1 DNA topoisomerase n=2 Tax=Caulobacter vibrioides RepID=B8GZL1_CAUCN Length = 899 Score = 99.4 bits (246), Expect = 2e-19 Identities = 63/194 (32%), Positives = 92/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS G WK L ++W F + + + V L + Sbjct: 522 FKRYVEYDFTAALEEKLDLVSDGKLDWKEFLREFWKDFHAAVGEIAELRTTNVLDALNEA 581 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D S R+CP+C G L K +FGA FIGC +P C+Y + S D Sbjct: 582 LGPHIFPDKGDGSNPRLCPTCGSGQLSLKTGKFGA--FIGCSNYPECRYTRQLGVSEGDG 639 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYV-QLGEDRKGYTPKRASVPHVK 532 D E +Q LG N + + LK+G +G YV +L + PKR+S+P Sbjct: 640 DAESADKQ---------LGLNPATGLAVWLKNGRFGPYVEELAAEGSSDKPKRSSLPKGW 690 Query: 533 DVDSITLEDALVLL 574 ++ +E AL LL Sbjct: 691 IASAMDMEKALRLL 704 [153][TOP] >UniRef100_A3SIS1 DNA topoisomerase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SIS1_9RHOB Length = 868 Score = 99.4 bits (246), Expect = 2e-19 Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E ELD VSAG +K +L +W F TS + I +V +L+ Sbjct: 518 FRKYVGYEFTADLEEELDVVSAGNADYKQVLARFWRDFSVAIAETSELRITEVLDVLDAA 577 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R+CP C EG L K SR +G F+GC +P C+Y + D+ Sbjct: 578 LAPTLYPPREDGSDPRICPLCGEGKLHLKTSR--SGGFVGCGNYPECRYTRPIGGEAGDN 635 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE--DRKGYTPKRASVPHV 529 + ++LG ++G ++I L+SG +G YVQ GE + P RAS+P Sbjct: 636 GD-------------RVLGEDNG--DEISLRSGRFGPYVQRGEATEENNKKPPRASLPKG 680 Query: 530 KDVDSITLEDALVLL 574 + L+ AL+LL Sbjct: 681 WQPAEMDLDKALLLL 695 [154][TOP] >UniRef100_Q2NB87 DNA topoisomerase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NB87_ERYLH Length = 845 Score = 99.0 bits (245), Expect = 2e-19 Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA ME ELD VS G ++K LL +W FK + +V ++L+ Sbjct: 511 FPNYVAYEFTAGMEEELDTVSDGREEYKELLAKFWADFKPKADEVMEKLPSEVTEVLDDY 570 Query: 182 FADYLFGSLPD--KSRVCPSCTE-----GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY 340 +DYLF D + R CP C + G L + R+GA F+ C +P CKY + Sbjct: 571 LSDYLFPPTEDGTEPRACPLCRDEGREGGRLALRGGRYGA--FVACANYPECKYTRRFA- 627 Query: 341 SSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASV 520 P N + + ++G + + E I KSG +G YVQ+GE G KRAS+ Sbjct: 628 ---------QPGGNESAADDGIMGQHPETGEDIERKSGRFGPYVQMGE---GKEAKRASI 675 Query: 521 PHVKDVDSITLEDALVLL 574 P KD+D L+ A+ LL Sbjct: 676 P--KDLDDFDLDWAVKLL 691 [155][TOP] >UniRef100_Q1GTU5 DNA topoisomerase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GTU5_SPHAL Length = 849 Score = 99.0 bits (245), Expect = 2e-19 Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E ELD+VS G +W+ +L +W FK ++ L++ Sbjct: 510 FERYVGYDFTAELEEELDDVSGGRAQWQAVLERFWRDFKPRTGEVMEQKPSEITAALDEF 569 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 YLF PDKS R+CP+C G L + +FG FI C +P CK+ K S Sbjct: 570 LGPYLF---PDKSDGSDPRLCPNCGTGRLALRGGKFGP--FIACSNYPDCKFTRKFAQSG 624 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPH 526 + + ++ P+ LG + S ++ +SG +G Y+QLGE G KR+S+P Sbjct: 625 GNGEADNGPE---------TLGTDPESGLEVTKRSGRFGPYIQLGE---GSEAKRSSIPK 672 Query: 527 VKDVDSITLEDALVLL 574 + L+ AL LL Sbjct: 673 DIPAEDFDLDYALRLL 688 [156][TOP] >UniRef100_A5CF60 DNA topoisomerase n=1 Tax=Orientia tsutsugamushi str. Boryong RepID=A5CF60_ORITB Length = 788 Score = 99.0 bits (245), Expect = 2e-19 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + +Y FTA +E +LD+++ G+ W+ +L ++WT F + + I + +E Sbjct: 521 FKKYVEYDFTAKLEDQLDSIAKGMIGWQEILKNFWTGFNNNVQEIEQYKITDIIPQIETL 580 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++LF ++ ++C C G L K+S++GA F+ C+ +P C + + +++ Sbjct: 581 LSNFLFPVQNGETDHKLCTLCKVGKLSLKLSKYGA--FLACNNYPSCNFTRNIAAAFENN 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED--RKGYTPKRASVPHV 529 D + N K +G++ + I LK GP+G Y+Q GED K PKR + + Sbjct: 639 DNLPKGKNN------KAIGYSDDMQKTIYLKEGPFGWYIQAGEDSTNKNDKPKRVPISVI 692 Query: 530 -KDVDSITLEDALVLL 574 ITLE A+ LL Sbjct: 693 SSSPQDITLETAVKLL 708 [157][TOP] >UniRef100_A6FU07 DNA topoisomerase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FU07_9RHOB Length = 839 Score = 99.0 bits (245), Expect = 2e-19 Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E ELD VSAG +K +L +W F + TS + I +V +L++ Sbjct: 518 FRKYVGYEFTANLEDELDKVSAGDLDYKQVLNRFWRDFSAAISETSELRITEVLDVLDEA 577 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R CP C EG+L K SR G F+GC ++P C++ + Sbjct: 578 LAPQLYPPREDGSDPRSCPLCGEGSLHLKTSRTGG--FVGCSRYPECRFTRPIGGEGAEG 635 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + ++LG + G ++I L+SG +G YVQ GE + P RAS+P Sbjct: 636 GD-------------RVLGEDQG--DEISLRSGRFGPYVQRGEVTEENKKPPRASLPKGW 680 Query: 533 DVDSITLEDALVLL 574 D + LE AL+LL Sbjct: 681 SPDDMDLEKALMLL 694 [158][TOP] >UniRef100_A6DUX6 DNA topoisomerase n=1 Tax=Roseovarius sp. TM1035 RepID=A6DUX6_9RHOB Length = 901 Score = 98.6 bits (244), Expect = 3e-19 Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E +LD VSAG +K +L +W F + TS + I +V +L+ Sbjct: 545 FRKYVGYEFTANLEEDLDRVSAGEADYKEILARFWRDFSAAIAETSELRITEVLDVLDAA 604 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 + L+ D S R CP C G L K SR +G F+GC +P C+Y D Sbjct: 605 LSPTLYPPREDGSDPRQCPLCGTGQLHLKTSR--SGGFVGCGNYPECRYTRP--IGGDAG 660 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + D ++LG + NE I L+SG +G YVQ GE + P RAS+P Sbjct: 661 ENGD-----------RILGQDEAGNE-ISLRSGRFGPYVQRGEATEENKKPDRASLPKGW 708 Query: 533 DVDSITLEDALVLL 574 +++TLE AL LL Sbjct: 709 TAEAMTLEKALTLL 722 [159][TOP] >UniRef100_Q2IXD6 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IXD6_RHOP2 Length = 911 Score = 97.8 bits (242), Expect = 5e-19 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E +LD +S W+ +L D+WT F + + QV +L++ Sbjct: 528 FARYVEYDFTAALEEKLDRISNNEISWQQVLRDFWTDFIGAVNDIKELRVAQVLDVLDEM 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CPSC G L K +FGA F+GC +P C++ Sbjct: 588 LGPHIYAPREDGGDPRQCPSCGTGRLNLKAGKFGA--FVGCSNYPECRHTRPLAADGGGA 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D + ++LG + + ++ +KSG +G Y+QLG+ + +G PKRA +P Sbjct: 646 DAD------------RVLGLDPDTGFEVAVKSGRFGPYIQLGDAKDYAEGEKPKRAGIPK 693 Query: 527 VKDVDSITLEDALVLL 574 + L+ AL LL Sbjct: 694 GTSPSDVELDVALRLL 709 [160][TOP] >UniRef100_Q215Z3 DNA topoisomerase n=1 Tax=Rhodopseudomonas palustris BisB18 RepID=Q215Z3_RHOPB Length = 922 Score = 97.8 bits (242), Expect = 5e-19 Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA +E LD +S W+ +L D+WT F ++ + QV L+ Sbjct: 528 FARYVEYDFTAALEENLDRISNNEISWQQVLRDFWTDFIGAVNDIKDLRVAQVLDALDDM 587 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CPSC G L K +FGA F+GC +P C+Y D Sbjct: 588 LGSHIYAPRDDGGDPRQCPSCGTGKLNLKAGKFGA--FVGCSNYPECRYTRPLAADGGGD 645 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 + ++LG + S ++ +K+G +G Y+QLG+ + +G PKRA +P Sbjct: 646 GD-------------RILGKDPVSGLEVAVKAGRFGPYIQLGDAKDYAEGEKPKRAGIPK 692 Query: 527 VKDVDSITLEDALVLL 574 + LE AL LL Sbjct: 693 NSSPGDMELELALKLL 708 [161][TOP] >UniRef100_C6QH43 DNA topoisomerase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QH43_9RHIZ Length = 920 Score = 97.8 bits (242), Expect = 5e-19 Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA++E +LD +S +K +L D+W +F + ++ + V + L + Sbjct: 540 FKRYVEYDFTAELEEKLDLISNNELAYKEVLRDFWRQFIASVGEIKDLRVGDVLEALNEM 599 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVS-RFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 ++F D S R+CP C +G L K+S ++GA FIGC +P C Y + S+++ Sbjct: 600 LGPHVFPDKGDGSDPRLCPKCNQGRLSLKISGKYGA--FIGCGNYPECNYTRQLSQSANN 657 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 + + K+LG+N + L++G +G Y+QLGE PKR+S+P Sbjct: 658 GE---------AALDGKVLGYND-DGIAVALRTGRFGPYIQLGEATGDEKPKRSSIPKGI 707 Query: 533 DVDSITLEDALVLL 574 D ++ E A+ LL Sbjct: 708 DAATLDFEKAMQLL 721 [162][TOP] >UniRef100_Q1H4T9 DNA topoisomerase n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4T9_METFK Length = 845 Score = 97.4 bits (241), Expect = 7e-19 Identities = 64/193 (33%), Positives = 90/193 (46%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY FTA++E ELD+++ G +W +L ++W F + SNV VE + E Sbjct: 528 FTRYVDYGFTANLENELDDIAEGEREWIPVLNEFWQGFNNQIHEKSNVERPGVEMLDE-- 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 CP C + L ++ RFG FIGC +P C YI Sbjct: 586 --------------ACPKCGK-PLQSRLGRFGK--FIGCSGYPECDYIR----------- 617 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKD 535 P N EP ++G S + ILL +GPYG Y+Q+G E PKR S+P Sbjct: 618 --NPNANANNNEPTVIGQEPESGKDILLLNGPYGPYLQIGLPEADSKKKPKRVSIPKEIP 675 Query: 536 VDSITLEDALVLL 574 V S+ +E AL L+ Sbjct: 676 VSSLDMETALKLI 688 [163][TOP] >UniRef100_A5VD05 DNA topoisomerase n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VD05_SPHWW Length = 852 Score = 97.4 bits (241), Expect = 7e-19 Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y +TA +E ELD+VS G W+ +L +W FK + +V L++ Sbjct: 521 FERYVSYDYTAHLEEELDDVSGGRAGWQQVLEAFWKDFKPKTAEVMDQKPSEVTAALDEF 580 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 A YLF PDK R+CP C EG L + RFGA FI C +P CK+ + + Sbjct: 581 LAPYLF---PDKGDGTDPRLCPVCQEGRLSLRGGRFGA--FIACSNYPECKFTRRFAQAG 635 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPH 526 +D DT P ++G + + ++ ++G +G Y+QLG+ G KR+S+P Sbjct: 636 AANDGADT--------GPVVIGTDPATGLEVSKRAGRFGPYIQLGD---GKDAKRSSIP- 683 Query: 527 VKDV--DSITLEDALVLL 574 KDV D + L AL LL Sbjct: 684 -KDVLGDDLDLGWALKLL 700 [164][TOP] >UniRef100_B6B9B7 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B9B7_9RHOB Length = 875 Score = 97.4 bits (241), Expect = 7e-19 Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E ELD+VSAG +K LLG +W F + TS + I +V +L+ Sbjct: 538 FRKYVGYEFTANLEEELDDVSAGERDYKDLLGRFWRDFSAAIAETSELRITEVLDVLDDA 597 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D + R CP C +G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGTDPRTCPKCGQGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVP-HV 529 E ++LG + G ++I LKSG +G YVQ GE + P R+S+P Sbjct: 656 YE-------------RVLGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQG 700 Query: 530 KDV------DSITLEDALVLL 574 KD + ITLE AL LL Sbjct: 701 KDFLPGWGPNEITLEQALTLL 721 [165][TOP] >UniRef100_A5PDV3 DNA topoisomerase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDV3_9SPHN Length = 853 Score = 97.4 bits (241), Expect = 7e-19 Identities = 69/198 (34%), Positives = 96/198 (48%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + FTA ME ELD VS G +WK LL ++W FK E +V ++L+ Sbjct: 511 FERYVSFDFTAGMEDELDTVSDGREEWKKLLAEFWKDFKPKTEEIMEKKPSEVTEVLDDF 570 Query: 182 FADYLFGSLPD--KSRVCPSC-TE----GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY 340 +DYLF D R CP C TE G L + R+GA F+ C +P CK+ + Sbjct: 571 LSDYLFPERADGKDPRHCPLCETEGREGGRLALRGGRYGA--FVACANYPECKFTRQFAK 628 Query: 341 SSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASV 520 D D+ + ++G + + + K+G +G Y+QLGE G KRAS+ Sbjct: 629 PGSDGDDG---------ADDGVMGKDPETGLPVERKTGRFGPYIQLGE---GKDAKRASI 676 Query: 521 PHVKDVDSITLEDALVLL 574 P KD+D LE AL LL Sbjct: 677 P--KDLDDFDLEWALKLL 692 [166][TOP] >UniRef100_Q1YNI1 DNA topoisomerase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YNI1_MOBAS Length = 923 Score = 97.1 bits (240), Expect = 9e-19 Identities = 61/193 (31%), Positives = 91/193 (47%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD +SAG WK +L ++W F + + T + + V L + Sbjct: 534 FERYVEYDFTAALEEKLDLISAGQLAWKDVLREFWQNFSAQVDGTKELRVTNVLDALNVE 593 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +F D + R CP C G L K+ +FGA F+GC +P C Y + + D Sbjct: 594 LGPLVFPPKEDGTEPRACPRCGNGQLSLKLGKFGA--FVGCSNYPDCGYTRQLGTNMSGD 651 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E P LG + + E + L++G +G YVQ GE G KR+S+P Sbjct: 652 GA-------AMDEGPSDLGVDPETGEPVTLRTGRFGPYVQRGE---GKEAKRSSLPKGWQ 701 Query: 536 VDSITLEDALVLL 574 + L+ AL LL Sbjct: 702 ASEMDLDKALRLL 714 [167][TOP] >UniRef100_Q1NAF4 DNA topoisomerase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NAF4_9SPHN Length = 855 Score = 97.1 bits (240), Expect = 9e-19 Identities = 65/193 (33%), Positives = 90/193 (46%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA +E ELD++S G +W+ +L +W FK + L+K Sbjct: 510 FERYVSYDFTAGLEDELDDISGGRAQWQDVLEAFWRDFKPKTAEVMEQKPSDITAELDKF 569 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 LF D S R CP C +G L + RFGA FI C +P CKY K Sbjct: 570 LEPMLFPPKADGSNPRACPMCGDGQLALRGGRFGA--FIACSNYPDCKYTRK-FGQPGGK 626 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 D EDT P++LG + + + I KSG +G Y+++GE G KR S+P Sbjct: 627 DGEDT--------GPEVLGQHPETGQDITRKSGRFGPYIEMGE---GKEAKRGSIPKDLP 675 Query: 536 VDSITLEDALVLL 574 +TL+ A+ LL Sbjct: 676 DGELTLDWAVKLL 688 [168][TOP] >UniRef100_A3W2J5 DNA topoisomerase n=1 Tax=Roseovarius sp. 217 RepID=A3W2J5_9RHOB Length = 906 Score = 97.1 bits (240), Expect = 9e-19 Identities = 68/194 (35%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTA++E +LD VSAG +K +L +W F + TS + I +V +L+ Sbjct: 544 FRKYVGYEFTANLEEDLDRVSAGEADYKEILARFWRDFSAAIAETSELRITEVLTVLDAA 603 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D S R CP C G L K SR +G F+GC +P C+Y D Sbjct: 604 LAPTLYPPREDGSDPRQCPLCGTGQLHLKTSR--SGGFVGCGNYPECRYTRP--IGGDAG 659 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 ++ D ++LG + E I L+SG +G YVQ GE + P RAS+P Sbjct: 660 EKGD-----------RILGEDENGIE-ISLRSGRFGPYVQRGEATEENKKPDRASLPKGW 707 Query: 533 DVDSITLEDALVLL 574 +++TLE AL LL Sbjct: 708 SAEAMTLEKALTLL 721 [169][TOP] >UniRef100_B0T0I9 DNA topoisomerase n=1 Tax=Caulobacter sp. K31 RepID=B0T0I9_CAUSK Length = 896 Score = 96.7 bits (239), Expect = 1e-18 Identities = 63/194 (32%), Positives = 94/194 (48%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD VS G WK L D+W F + + + V L + Sbjct: 522 FRRYVEYDFTAALEEQLDLVSDGKLDWKQFLRDFWKDFHAAVGEIAELRTTNVLDALNES 581 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 ++F D S R+CP+C G L KV +FGA FIGC +P C++ + L +++ + Sbjct: 582 LGPHIFPDKGDGSDPRLCPTCGTGQLSLKVGKFGA--FIGCSNYPECRF-TRQLATAEGE 638 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYV-QLGEDRKGYTPKRASVPHVK 532 E + K LG N + + LK+G +G YV + + G PKR+S+P Sbjct: 639 GEAEAAD--------KELGINPATGRAVWLKNGRFGPYVEEPAAEGSGDKPKRSSLPKGW 690 Query: 533 DVDSITLEDALVLL 574 + LE AL LL Sbjct: 691 TPAGLDLEKALRLL 704 [170][TOP] >UniRef100_C6X8M3 DNA topoisomerase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8M3_METSD Length = 858 Score = 96.3 bits (238), Expect = 2e-18 Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY FTA++E ELD+++ G +W +L D+W F +++LEK Sbjct: 528 FTRYVDYGFTANLENELDDIAEGEREWVPVLDDFWQGFN--------------KQLLEKA 573 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 D + D CP C + L ++ RFG FIGC +P C YI Sbjct: 574 NIDRAEITQEDIGEACPKCGK-PLHSRLGRFGK--FIGCSGYPECDYI------------ 618 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVKD 535 +T EP ++G ++ S++ ILL +GPYG Y+QLG E+ PKR S+P Sbjct: 619 RNTGSNAAASSEPVVMGHDAASDKDILLLNGPYGPYLQLGLPEEGSKKKPKRVSIPKEIP 678 Query: 536 VDSITLEDALVLL 574 + ++ LE A+ L+ Sbjct: 679 LANVDLEVAMKLI 691 [171][TOP] >UniRef100_Q1QKM0 DNA topoisomerase n=1 Tax=Nitrobacter hamburgensis X14 RepID=Q1QKM0_NITHX Length = 936 Score = 95.9 bits (237), Expect = 2e-18 Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA++E +LD +S W+ +L D+W F +V + +V +L+ Sbjct: 552 FARYVEYDFTANLEEQLDRISNNEVSWQQVLKDFWNDFIGVVNEIKDVRVSEVLDVLDNM 611 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CP+C G L K +FGA F+GC +P C+Y ++D + Sbjct: 612 LGPHIYAPREDGGDPRQCPTCGTGKLNLKAGKFGA--FVGCSNYPECRYTRP--LAADGE 667 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D ++LG + S + +KSG +G Y+QLGE +G PKRA +P Sbjct: 668 AGGD-----------RILGKDPESGLDVTVKSGRFGPYIQLGEPSDYGEGEKPKRAGIPK 716 Query: 527 VKDVDSITLEDALVLL 574 + L+ A+ LL Sbjct: 717 NTSPADMELDLAVKLL 732 [172][TOP] >UniRef100_A9E167 DNA topoisomerase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E167_9RHOB Length = 885 Score = 95.9 bits (237), Expect = 2e-18 Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTAD+E +LD VSAG +K +L +W F + TS + I +V + + + Sbjct: 516 FRRYVGYDFTADLEDQLDKVSAGDAAYKEVLRRFWRDFSAAIAETSELRITEVLEKINEV 575 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D S R+CP+C G L + +R G G FIGC +P C+Y + D Sbjct: 576 LEPHLFPPTEDGSDPRLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDP 632 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + E + + KLLG + G ++I + G +G YVQ G + P R S+P Sbjct: 633 EAE----ASAIPPDGKLLGEDQG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSIPKDW 686 Query: 533 DVDSITLEDALVLL 574 + +TLE ++LL Sbjct: 687 PAEEVTLEQGVMLL 700 [173][TOP] >UniRef100_Q28MI5 DNA topoisomerase n=1 Tax=Jannaschia sp. CCS1 RepID=Q28MI5_JANSC Length = 907 Score = 95.5 bits (236), Expect = 3e-18 Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ Y FTAD+E +LD VSAG +K +L +W F++ + TS++ I +V + + Sbjct: 555 FNRYVQYDFTADLEQQLDEVSAGDRHYKDVLDRFWRDFRAAIDETSDLRIGEVLDKINEV 614 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D + R+CP+C G L + +R G G FIGC +P C+Y + D Sbjct: 615 LEPHLFPDPGDGTDPRLCPNCGVGRLSMRTARAG-GAFIGCSAYPECRYTRP--FGPPDP 671 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + E + + KLLG + G ++I + G +G YVQ G + P R S+P Sbjct: 672 EAE----ASAIPPDGKLLGEDQG--DEIRIFKGRFGPYVQRGAMTEENKKPPRQSIPKDW 725 Query: 533 DVDSITLEDALVLL 574 + + LE AL+LL Sbjct: 726 TPEELDLERALMLL 739 [174][TOP] >UniRef100_UPI0001BB471A DNA topoisomerase I n=1 Tax=alpha proteobacterium HIMB114 RepID=UPI0001BB471A Length = 851 Score = 95.1 bits (235), Expect = 3e-18 Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 1/191 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY+FTA++E LD +++G KW +L +W +F S + + ML + Sbjct: 531 FNRYVDYNFTANLEDSLDEITSGKIKWINVLSQFWEKFNSNVNEVKELRTRTILDMLNES 590 Query: 182 FADYLFGSLPDKSRVCPSC-TEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 AD +F + +V C G L KV RFGA FIGC +P CK+ Sbjct: 591 LADIIFDK-DGEGKVLRKCQCGGDLSLKVGRFGA--FIGCSNYPECKFTRPL-------- 639 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 Q + EPK +G + +KI+LK G +G Y+Q+G D K K S+P Sbjct: 640 SRIKAAQEDFMSEPKEIG-ETDEGKKIMLKKGRFGPYLQVGNDEK--EMKNFSIPKGISP 696 Query: 539 DSITLEDALVL 571 + + +E A L Sbjct: 697 NDVDIEKAKFL 707 [175][TOP] >UniRef100_A3WWV5 DNA topoisomerase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WWV5_9BRAD Length = 910 Score = 95.1 bits (235), Expect = 3e-18 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA++E +LD +S W+ +L D+W F +V + +V +L+ Sbjct: 527 FARYVEYDFTANLEEQLDRISNNEISWQQVLKDFWDDFIGVVNEIKDVRVSEVLDVLDNM 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CP+C G L K +FGA F+GC +P C+Y ++D D Sbjct: 587 LGPHIYAPREDGGDPRQCPTCGTGRLNLKAGKFGA--FVGCSNYPDCRYTRP--LAADGD 642 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGED---RKGYTPKRASVPH 526 D ++LG + S + +KSG +G Y+QLGE +G PKRA +P Sbjct: 643 AGGD-----------RVLGKDPESGLDVAVKSGRFGPYIQLGEATDYAEGEKPKRAGIPK 691 Query: 527 VKDVDSITLEDALVLL 574 + L+ A+ LL Sbjct: 692 NTSPADMELDLAVKLL 707 [176][TOP] >UniRef100_A3V7A4 DNA topoisomerase n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V7A4_9RHOB Length = 870 Score = 95.1 bits (235), Expect = 3e-18 Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSAG +K +L +W F + T+++ I +V + + Sbjct: 517 FQKYIGYDFTADLENQLDEVSAGNADYKKVLDRFWRDFSAAIGETADLRIGEVLDKINEV 576 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D + R+CP+C G L + +R G G FIGC +P C+Y + D Sbjct: 577 LEPHLFPPTADGTDPRLCPNCGAGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDP 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY-TPKRASVPHVK 532 + E ++ + KLLG ++G ++I + G +G YVQ G + P R VP Sbjct: 634 EAE----KSAIPPDGKLLGHDAG--DEIRIFKGRFGPYVQRGATSEANPKPDRTGVPEGW 687 Query: 533 DVDSITLEDALVLL 574 + + LE AL LL Sbjct: 688 PAEEVDLEQALRLL 701 [177][TOP] >UniRef100_A3UJW6 DNA topoisomerase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJW6_9RHOB Length = 884 Score = 94.7 bits (234), Expect = 4e-18 Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ Y FTA +E +LD VSAG ++K LL D+W F + E +++ I V + Sbjct: 524 FARYVQYDFTASLEDQLDKVSAGDLEYKQLLRDFWKDFHASIEDIADLRIGDVIDAMNVA 583 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +F D S +VCP C EG L ++ + GA F+GC +P C+Y + L + D Sbjct: 584 LAPLIFPPREDGSDPKVCPKCNEGALSLRLGKHGA--FVGCSNYPDCRY-TRPLGGGELD 640 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 + LG + + I+LK G +G Y+++ + + P+R S+P D Sbjct: 641 ----------AVAGDGELGEHPETGAMIVLKDGRFGPYLEMQVEDED-KPRRGSIPKGWD 689 Query: 536 VDSITLEDALVLL 574 SITLE A+ L+ Sbjct: 690 PASITLEKAVALI 702 [178][TOP] >UniRef100_Q1GE45 DNA topoisomerase n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GE45_SILST Length = 893 Score = 94.4 bits (233), Expect = 6e-18 Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD+VSAG +K LL +W F + TS++ I +V +L++ Sbjct: 538 FKRYVEYDFTAALENQLDDVSAGGKDYKELLDSFWRDFSAAISETSDLRISEVLDVLDEA 597 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D R+CP C G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGGDPRICPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVP-HV 529 E ++LG + G ++I LKSG +G YVQ GE + P R+S+P Sbjct: 656 YE-------------RVLGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQG 700 Query: 530 KDV------DSITLEDALVLL 574 KD + ITLE A+ LL Sbjct: 701 KDYLPGWGPNEITLEQAVTLL 721 [179][TOP] >UniRef100_A3SYM3 DNA topoisomerase n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SYM3_9RHOB Length = 888 Score = 94.4 bits (233), Expect = 6e-18 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSA +K +LG +W F + T+++ I +V + + + Sbjct: 517 FRKYVGYDFTADLENQLDKVSAADADYKDVLGRFWQDFSAAIAETADLRITEVLEKINEV 576 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D S R+CP+C G L + +R G G FIGC +P C+Y + D Sbjct: 577 LEPHLFPPNEDGSDPRLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDP 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + E + + KLLG + G ++I + G +G YVQ G + P R SVP Sbjct: 634 EAE----ASAIPPDGKLLGEDMG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDW 687 Query: 533 DVDSITLEDALVLL 574 + + LE A++LL Sbjct: 688 PAEELELERAVMLL 701 [180][TOP] >UniRef100_A3SF48 DNA topoisomerase n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SF48_9RHOB Length = 888 Score = 94.4 bits (233), Expect = 6e-18 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSA +K +LG +W F + T+++ I +V + + + Sbjct: 517 FRKYVGYDFTADLENQLDKVSAADADYKDVLGRFWQDFSAAIAETADLRITEVLEKINEV 576 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D S R+CP+C G L + +R G G FIGC +P C+Y + D Sbjct: 577 LEPHLFPPNEDGSDPRLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDP 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + E + + KLLG + G ++I + G +G YVQ G + P R SVP Sbjct: 634 EAE----ASAIPPDGKLLGEDMG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDW 687 Query: 533 DVDSITLEDALVLL 574 + + LE A++LL Sbjct: 688 PAEELELERAVMLL 701 [181][TOP] >UniRef100_A3JR62 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JR62_9RHOB Length = 870 Score = 94.4 bits (233), Expect = 6e-18 Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + + FTAD+E++LDNVSAG +K +L +W F + TS + I V L+ Sbjct: 518 FRKYVGFDFTADLESQLDNVSAGDADYKVVLEQFWHDFSAAIAETSELRISDVLTKLDAA 577 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D + + CP C EG L K SR +G F+GC +P C+Y D Sbjct: 578 LAPQLYPPREDGADPKTCPLCGEGKLHLKSSR--SGGFVGCGNYPECRYTRP--IGGDAA 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 D D ++LG ++G ++I L++G +G Y+Q G+ + P RAS+P Sbjct: 634 DGGD-----------RVLGEDAG--DEISLRTGRFGPYIQRGQVTEEVKKPLRASLPKGW 680 Query: 533 DVDSITLEDALVLL 574 D++ LE AL+LL Sbjct: 681 APDNMDLEKALMLL 694 [182][TOP] >UniRef100_Q3SRW8 DNA topoisomerase n=1 Tax=Nitrobacter winogradskyi Nb-255 RepID=Q3SRW8_NITWN Length = 911 Score = 94.0 bits (232), Expect = 7e-18 Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ +Y FTA++E +LD +S W+ +L D+W F +V + +V +L+ Sbjct: 527 FARYVEYDFTANLEEQLDRISNNEVSWQQVLKDFWDDFIGVVNEIKDVRVSEVLDVLDNM 586 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +++ D R CP+C G L K +FGA F+GC +P C++ ++D + Sbjct: 587 LGPHIYAPREDGGDPRQCPTCGTGRLNLKAGKFGA--FVGCSNYPECRHTRP--LAADGE 642 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR---KGYTPKRASVPH 526 D ++LG + S + +KSG +G Y+QLGE +G PKRA +P Sbjct: 643 AGGD-----------RVLGKDPESGLDVAVKSGRFGPYIQLGEASDYGEGEKPKRAGIPK 691 Query: 527 VKDVDSITLEDALVLL 574 I L+ A+ LL Sbjct: 692 NTSPADIELDLAVKLL 707 [183][TOP] >UniRef100_C9CZJ8 DNA topoisomerase I n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CZJ8_9RHOB Length = 884 Score = 93.6 bits (231), Expect = 1e-17 Identities = 69/201 (34%), Positives = 98/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA +E +LD+VSAG +K LL +W F + TS++ I +V +L++ Sbjct: 538 FKRYVEYDFTAALENQLDDVSAGGKDYKELLDSFWRDFSAAIAETSDLRISEVLDILDEA 597 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D R+CP C G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGGDPRLCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVP-HV 529 E ++LG + G ++I LKSG +G YVQ GE + P R+S+P Sbjct: 656 YE-------------RILGEDEG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQG 700 Query: 530 KDV------DSITLEDALVLL 574 KD + ITLE A+ LL Sbjct: 701 KDYLPGWGPNDITLEQAVTLL 721 [184][TOP] >UniRef100_C6V581 DNA topoisomerase n=1 Tax=Neorickettsia risticii str. Illinois RepID=C6V581_NEORI Length = 827 Score = 93.2 bits (230), Expect = 1e-17 Identities = 62/187 (33%), Positives = 91/187 (48%), Gaps = 1/187 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS+ +Y FTA+ME LD V+ G W ++ D+W F S E V I +V + Sbjct: 525 FSKYVEYHFTAEMEDRLDKVADGTIFWLDVIQDFWDSFHSNVEEVEKVPITEVLAFVNGA 584 Query: 182 FADYLFGSLPDK-SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 A S K CP C +G + VSR+G F+GC +P C++I + YS+DDD Sbjct: 585 LAKQKLVSAEVKVGDKCPKCEKGYMHLSVSRYGV--FLGCTNYPVCRFIVNS-YSTDDD- 640 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 E PK + + I L GPYGIY++ Y K +S+P KDV Sbjct: 641 ----------TEYPKQIA------QDISLHKGPYGIYLK-------YKGKNSSIP--KDV 675 Query: 539 DSITLED 559 D +++++ Sbjct: 676 DPVSIDE 682 [185][TOP] >UniRef100_A9G971 DNA topoisomerase n=1 Tax=Phaeobacter gallaeciensis BS107 RepID=A9G971_9RHOB Length = 900 Score = 93.2 bits (230), Expect = 1e-17 Identities = 70/201 (34%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E ELD+VSAG +K LL +W F + TS++ I +V +L+ Sbjct: 538 FRTYVGYEFTANLEGELDDVSAGDRDYKDLLSRFWRDFSAAISETSDLRITEVLDVLDDA 597 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D RVCP C G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGVDPRVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVP-HV 529 E ++LG + G ++I LKSG +G YVQ GE + P R+S+P Sbjct: 656 YE-------------RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQG 700 Query: 530 KDV------DSITLEDALVLL 574 KD + +TLE A+ LL Sbjct: 701 KDFLPGWGPNEVTLEQAVTLL 721 [186][TOP] >UniRef100_A9EWC2 DNA topoisomerase n=1 Tax=Phaeobacter gallaeciensis 2.10 RepID=A9EWC2_9RHOB Length = 890 Score = 93.2 bits (230), Expect = 1e-17 Identities = 70/201 (34%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E ELD+VSAG +K LL +W F + TS++ I +V +L+ Sbjct: 538 FRTYVGYEFTANLEGELDDVSAGDRDYKDLLSRFWRDFSAAISETSDLRITEVLDVLDDA 597 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D RVCP C G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGVDPRVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVP-HV 529 E ++LG + G ++I LKSG +G YVQ GE + P R+S+P Sbjct: 656 YE-------------RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQG 700 Query: 530 KDV------DSITLEDALVLL 574 KD + +TLE A+ LL Sbjct: 701 KDFLPGWGPNEVTLEQAVTLL 721 [187][TOP] >UniRef100_C5V0V2 DNA topoisomerase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0V2_9PROT Length = 872 Score = 92.8 bits (229), Expect = 2e-17 Identities = 66/193 (34%), Positives = 93/193 (48%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY+FTA +E ELD VS G W G++ ++W F + + +N I + +++L++ Sbjct: 528 FTRYVDYNFTASLEDELDEVSDGKRDWIGVMDEFWKGFSALIKEKTN--IERPQELLDE- 584 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 CP C + L K+SR+G+ FI C +P CKY Sbjct: 585 --------------ACPECGK-PLAKKLSRYGS--FISCTNYPECKYKRSV--------- 618 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPHVKD 535 Q+ +E LG + S + +LL GPYG YVQLGE +G PKR S P Sbjct: 619 GGETQEEVRVE----LGVHPESAQAVLLLRGPYGHYVQLGEVIEGEKAKPKRVSWPKEMA 674 Query: 536 VDSITLEDALVLL 574 VD LE AL LL Sbjct: 675 VDQADLESALKLL 687 [188][TOP] >UniRef100_A8LHT2 DNA topoisomerase n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LHT2_DINSH Length = 900 Score = 92.4 bits (228), Expect = 2e-17 Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSAG +K +L +W F + TS + I +V + + + Sbjct: 557 FRKYVGYDFTADLENQLDEVSAGDRNYKDVLDRFWRDFSAAIAETSELRITEVLEKINEV 616 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A +LF D R+CP+C G L + +R G G FIGC +P C+Y + + Sbjct: 617 LAPHLFPPREDGKPPRLCPNCEIGQLSMRTARSG-GAFIGCSNYPECRY-TRPFGPPGME 674 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + P E KLLG + G ++I + G +G YVQ G + P R S+P Sbjct: 675 EASGIP------PEGKLLGEDGG--DEIRVFKGRFGPYVQRGAVTEENKKPPRQSIPKSW 726 Query: 533 DVDSITLEDALVLL 574 + + L+ A++LL Sbjct: 727 VPEELELDKAVMLL 740 [189][TOP] >UniRef100_A3X8X7 DNA topoisomerase n=1 Tax=Roseobacter sp. MED193 RepID=A3X8X7_9RHOB Length = 892 Score = 92.4 bits (228), Expect = 2e-17 Identities = 67/201 (33%), Positives = 97/201 (48%), Gaps = 10/201 (4%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E ELD+VSAG +K +L +W F + TS++ I +V +L++ Sbjct: 538 FRTYVGYEFTANLEGELDDVSAGGRDYKDILSKFWRDFSAAISETSDLRISEVLDVLDET 597 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D + RVCP C G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGTDPRVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 E ++LG + G ++I LKSG +G YVQ GE + P R+S+P Sbjct: 656 YE-------------RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLPKQG 700 Query: 533 -------DVDSITLEDALVLL 574 + +TLE A+ LL Sbjct: 701 KEFLPGWGPNDLTLEQAVTLL 721 [190][TOP] >UniRef100_B7RLF8 DNA topoisomerase n=1 Tax=Roseobacter sp. GAI101 RepID=B7RLF8_9RHOB Length = 881 Score = 91.7 bits (226), Expect = 4e-17 Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y FTAD+E +LD VSA +K +L +W F + T+++ I +V + + + Sbjct: 517 FRKYVGYDFTADLEDQLDKVSAADADYKDVLTRFWKDFSAAIAETADLRITEVLEKINEV 576 Query: 182 FADYLFGSLPD--KSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF D R+CP+C G L + +R G G FIGC +P C+Y + D Sbjct: 577 LEPHLFPPTEDGKDPRLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRYTRP--FGPPDP 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVK 532 + E + + KLLG + G ++I + G +G YVQ G + P R SVP Sbjct: 634 EAE----ASAIPPDGKLLGEDQG--DEIRVFKGRFGPYVQRGPVTEENKKPPRQSVPKDW 687 Query: 533 DVDSITLEDALVLL 574 + + LE AL+LL Sbjct: 688 PAEELDLERALMLL 701 [191][TOP] >UniRef100_C0F991 DNA topoisomerase I (Fragment) n=1 Tax=Wolbachia endosymbiont of Muscidifurax uniraptor RepID=C0F991_9RICK Length = 376 Score = 91.3 bits (225), Expect = 5e-17 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA ME +LD +S G WK LG +W F + + +V + Sbjct: 83 FQRCVEYDFTAQMEEKLDLISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHDL 142 Query: 182 FADYLFGSLPDKSRV---CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 D+ F S K V CP+C G I K++ AG F+GC +P C + + S+D+ Sbjct: 143 VIDW-FCSEEGKKEVNTKCPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDN 199 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 E PK LG + +N+++++K GP+G+Y++ + K K S+P Sbjct: 200 S------------EYPKSLGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDI 245 Query: 533 DVDSITLEDALVLL 574 +V+ I L A LL Sbjct: 246 NVNEIDLSTATQLL 259 [192][TOP] >UniRef100_B7QQ34 DNA topoisomerase n=1 Tax=Ruegeria sp. R11 RepID=B7QQ34_9RHOB Length = 886 Score = 91.3 bits (225), Expect = 5e-17 Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 3/177 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA++E +LD+VSAG +K LL +W F + TS++ I +V +L++ Sbjct: 538 FRTYVGYEFTANLENQLDDVSAGDADYKELLSKFWRDFSAAISETSDLRISEVLDVLDEA 597 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 A L+ D + RVCP C G L K SR G F+GC +P C Y + Sbjct: 598 LAPQLYPPREDGTDPRVCPKCGAGQLHLKTSRTGG--FVGCGNYPECNYTRPISGEGAEG 655 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVP 523 E ++LG + G ++I LKSG +G YVQ GE + P R+S+P Sbjct: 656 YE-------------RILGEDDG--DEIHLKSGRFGPYVQRGEATPENKKPPRSSLP 697 [193][TOP] >UniRef100_Q4EA11 DNA topoisomerase (Fragment) n=1 Tax=Wolbachia endosymbiont of Drosophila ananassae RepID=Q4EA11_9RICK Length = 496 Score = 90.5 bits (223), Expect = 8e-17 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA ME +LD +S G WK LG +W F + + +V + Sbjct: 242 FQRCVEYDFTAQMEEKLDLISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHNL 301 Query: 182 FADYLFGSLPDKSRV---CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 D+ F S + V CP+C G I K++ AG F+GC +P C + + S+D+ Sbjct: 302 VVDW-FCSEEGRKEVNTKCPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDN 358 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 E PK LG + +N+++++K GP+G+Y++ + K K S+P Sbjct: 359 S------------EYPKSLGVDGITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDI 404 Query: 533 DVDSITLEDALVLL 574 +V+ I L A LL Sbjct: 405 NVNEIDLSTATQLL 418 [194][TOP] >UniRef100_C0R4C4 DNA topoisomerase n=2 Tax=Wolbachia RepID=C0R4C4_WOLWR Length = 816 Score = 90.5 bits (223), Expect = 8e-17 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA ME +LD +S G WK LG +W F + + +V + Sbjct: 523 FQRCVEYDFTAQMEEKLDLISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHNL 582 Query: 182 FADYLFGSLPDKSRV---CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 D+ F S + V CP+C G I K++ AG F+GC +P C + + S+D+ Sbjct: 583 VVDW-FCSEEGRKEVNTKCPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDN 639 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 E PK LG + +N+++++K GP+G+Y++ + K K S+P Sbjct: 640 S------------EYPKSLGVDGITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDI 685 Query: 533 DVDSITLEDALVLL 574 +V+ I L A LL Sbjct: 686 NVNEIDLSTATQLL 699 [195][TOP] >UniRef100_Q0FCC1 DNA topoisomerase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FCC1_9RHOB Length = 866 Score = 90.5 bits (223), Expect = 8e-17 Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + Y++TA +E ELD+VSAG +K +LG +W F + T+ + I +V + + Sbjct: 518 FRQYVGYNYTAGLEEELDSVSAGKENYKSVLGRFWRDFSAAINETAELRITEVLEKINDV 577 Query: 182 FADYLFGSLP--DKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +LF + R+CP+C G L + +R G G FIGC +P C+Y + + Sbjct: 578 LEPHLFPTTEKGGDPRLCPNCEIGRLSMRTARSG-GAFIGCSNYPECRY-TRAFGPPGAE 635 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPH 526 D P E K LG + G ++I G +G YVQ GE D K P R S+P Sbjct: 636 DSSGIP------PEGKNLGEDEG--DQIYAFKGRFGPYVQRGEVSDDNK--KPPRQSIPK 685 Query: 527 VKDVDSITLEDALVLL 574 + LE AL LL Sbjct: 686 DWPPADVDLEKALRLL 701 [196][TOP] >UniRef100_UPI0000DAED1D hypothetical protein Wendoof_01000097 n=1 Tax=Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24 RepID=UPI0000DAED1D Length = 760 Score = 90.1 bits (222), Expect = 1e-16 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA ME +LD +S G WK LG +W F + + +V + Sbjct: 523 FQRCVEYDFTAQMEEKLDLISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHDL 582 Query: 182 FADYLFGSLPDKSRV---CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 D+ F S + V CP+C G I K++ AG F+GC +P C + + S+D+ Sbjct: 583 VIDW-FCSEEGRKEVNTKCPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDN 639 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 E PK LG + +N+++++K GP+G+Y++ + K K S+P Sbjct: 640 S------------EYPKSLGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDI 685 Query: 533 DVDSITLEDALVLL 574 +V+ I L A LL Sbjct: 686 NVNEIDLSTATQLL 699 [197][TOP] >UniRef100_Q73G34 DNA topoisomerase n=1 Tax=Wolbachia endosymbiont of Drosophila melanogaster RepID=Q73G34_WOLPM Length = 816 Score = 90.1 bits (222), Expect = 1e-16 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA ME +LD +S G WK LG +W F + + +V + Sbjct: 523 FQRCVEYDFTAQMEEKLDLISNGHADWKKELGHFWVPFFGHVNSVKQMTHDEVFSGIHDL 582 Query: 182 FADYLFGSLPDKSRV---CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 D+ F S + V CP+C G I K++ AG F+GC +P C + + S+D+ Sbjct: 583 VIDW-FCSEEGRKEVNTKCPACLGG--ILKLNFGKAGVFLGCSNYPECNHTKEITGSNDN 639 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVK 532 E PK LG + +N+++++K GP+G+Y++ + K K S+P Sbjct: 640 S------------EYPKSLGIDDITNQEVMIKKGPFGLYLEFNNELK--KKKTVSIPKDI 685 Query: 533 DVDSITLEDALVLL 574 +V+ I L A LL Sbjct: 686 NVNEIDLSTATQLL 699 [198][TOP] >UniRef100_A3WD22 DNA topoisomerase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WD22_9SPHN Length = 858 Score = 89.7 bits (221), Expect = 1e-16 Identities = 68/198 (34%), Positives = 93/198 (46%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA ME ELD VS G +K LL +W FK + +V ++L++ Sbjct: 510 FPTYVAYDFTAGMEDELDTVSDGREDYKELLAKFWQDFKPKADEVMEKMPSEVTEVLDEY 569 Query: 182 FADYLFGSLPD--KSRVCPSC-----TEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY 340 +DYLF D +R CP C + G L + R GA FI C +P CK+ Sbjct: 570 LSDYLFPPREDGKDARYCPLCDAEGRSGGRLALRGGRNGA--FIACANYPECKFTRSFGP 627 Query: 341 SSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASV 520 +D DE + ++G + + I KSG +G YV++ D K KRAS+ Sbjct: 628 PREDGDE---------AVQDGVMGQHPETGADIHRKSGRFGPYVEMEVDEK---KKRASI 675 Query: 521 PHVKDVDSITLEDALVLL 574 P KDVD LE A+ LL Sbjct: 676 P--KDVDDFDLEWAIKLL 691 [199][TOP] >UniRef100_Q5GTP5 DNA topoisomerase n=1 Tax=Wolbachia endosymbiont strain TRS of Brugia malayi RepID=Q5GTP5_WOLTR Length = 816 Score = 87.8 bits (216), Expect = 5e-16 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA ME +LD +S G WK LG +W F ++ + ++ + Sbjct: 523 FQRCVEYDFTAQMEEKLDLISNGRADWKKELGYFWVPFFNHVNSVKQMTHDEIFNGIRDL 582 Query: 182 FADYLFGSLPDK--SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 D+ K ++ CP C +G I K++ AG F+GC +P C + + S+D+ Sbjct: 583 VVDWFCSEEGKKEVNKKCPDCPDG--ILKLNFGKAGVFLGCSNYPTCTHTKEITGSNDNS 640 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKD 535 E PK LG + + +++++K GP+G+Y++ + + K S+P + Sbjct: 641 ------------EYPKSLGIDGVTEQEVVIKKGPFGLYLEFNSESE--KKKTVSIPKDIN 686 Query: 536 VDSITLEDALVLL 574 V+ I L A LL Sbjct: 687 VNDIDLSTATRLL 699 [200][TOP] >UniRef100_Q2GDH2 DNA topoisomerase n=1 Tax=Neorickettsia sennetsu str. Miyayama RepID=Q2GDH2_NEOSM Length = 827 Score = 87.8 bits (216), Expect = 5e-16 Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 1/187 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS+ +Y FTA++E LD V+ G W ++ D+W F S E V I +V + Sbjct: 525 FSKYVEYHFTAELEDRLDKVADGTIFWLDVIQDFWDSFHSNVEEVEKVPITEVLAFVNGA 584 Query: 182 FADYLFGSLPDK-SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 A S K CP C +G + VSR+G F+GC +P C++I + YS+D+D Sbjct: 585 LARQKLVSAEVKVGDKCPKCEKGYMHLNVSRYGV--FLGCTDYPVCRFIVNS-YSTDND- 640 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 E PK + + I L GPYGIY++ KG K +S+P KDV Sbjct: 641 ----------TEYPKQIA------QDISLHKGPYGIYLKC----KG---KNSSIP--KDV 675 Query: 539 DSITLED 559 D +++++ Sbjct: 676 DPVSIDE 682 [201][TOP] >UniRef100_B3CNR3 DNA topoisomerase n=2 Tax=Wolbachia endosymbiont of Culex quinquefasciatus RepID=B3CNR3_WOLPP Length = 816 Score = 87.8 bits (216), Expect = 5e-16 Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 14/205 (6%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTA ME LD++S G WK LG +W F + H++ V++M Sbjct: 523 FQRCVEYDFTAQMEERLDSISNGHADWKKELGYFWVPFFN--------HVNSVKQMTH-- 572 Query: 182 FADYLFGSLPDK--------------SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCK 319 D +F + D + CP+C+ G I K++ AG F+GC +P C Sbjct: 573 --DEIFSGIHDLVVNWFCSEEGKEEIGKKCPNCSGG--ILKLNFGKAGVFLGCSNYPACN 628 Query: 320 YIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGY 499 + + S+D+ E PK LG + + +++++K GP+G+Y++ + + Sbjct: 629 HTKEITGSNDNS------------EYPKSLGIDDVTGQEVMIKKGPFGLYLEFNSESE-- 674 Query: 500 TPKRASVPHVKDVDSITLEDALVLL 574 K+ SVP +V+ I L A LL Sbjct: 675 KKKKISVPKDINVNDIDLNTATRLL 699 [202][TOP] >UniRef100_A8II62 DNA topoisomerase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8II62_CHLRE Length = 772 Score = 85.5 bits (210), Expect = 3e-15 Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY FT+DME LD+V++G W+ +L +W F++ + + Q Sbjct: 555 FATWVDYDFTSDMEGRLDDVASGKAAWRRVLSAFWGPFQAAVGSMAAIRTTQ-----PPG 609 Query: 182 FADYLFGSLPDKS-RVCPSCTEGTLIFKVSRFGAGYFIGC----DQHPRCKYIAKTLYSS 346 G P + R CP C G L+ K SR+G FIGC D+ +C + L S Sbjct: 610 APGAAAGPAPQRDPRRCPKCGVGRLVLKPSRYGG--FIGCSNFADEALQCDFARPLLPSE 667 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPH 526 D P T +LLG + + + + ++ GPYG+YVQ G+ K PK+ Sbjct: 668 GADGGSCVPFNAT----ERLLGSHPDTGQPVYVRLGPYGLYVQAGDAPK-KEPKKKKTGF 722 Query: 527 VKDVDSITLEDALVLL 574 + S+TLE AL LL Sbjct: 723 T--IQSVTLEAALALL 736 [203][TOP] >UniRef100_B9NA31 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NA31_POPTR Length = 86 Score = 84.3 bits (207), Expect = 6e-15 Identities = 43/73 (58%), Positives = 55/73 (75%), Gaps = 2/73 (2%) Frame = +2 Query: 317 KYIAKTLYSSDDDDEEDTPQQ--NTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDR 490 +YIAKTLY DD+EE+TPQ +T ++E KLL + S+EK++LK GPYG YVQLGEDR Sbjct: 10 RYIAKTLYG--DDEEEETPQDTNDTNVDETKLLDVHPTSDEKVVLKKGPYGFYVQLGEDR 67 Query: 491 KGYTPKRASVPHV 529 G T KR+SV H+ Sbjct: 68 TGCTLKRSSVSHL 80 [204][TOP] >UniRef100_Q3SMS7 DNA topoisomerase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMS7_THIDA Length = 857 Score = 82.0 bits (201), Expect = 3e-14 Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS DY FTA +E +LD+VS G W LLG++W+ F+ + + + + +LE Sbjct: 517 FSHYVDYDFTAKLEDKLDDVSNGKRVWSRLLGEFWSGFEG--DLKAKQDVERGCPILE-- 572 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 CP C + L + S+ G FIGC +P C Y Sbjct: 573 --------------ACPKCAK-PLFMQASK--RGLFIGCSGYPECDY------------- 602 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG---EDRKGYTPKRASVPHVK 532 P T E +LG + S + L SG +G YVQ+G ED+K P+RAS P Sbjct: 603 -TRPLHPATAEGDNILGKDPASGLDVKLLSGRFGPYVQIGDMPEDKKAPKPRRASWPKDI 661 Query: 533 DVDSITLEDALVLL 574 +++ TL+ AL L Sbjct: 662 PLENATLDLALKFL 675 [205][TOP] >UniRef100_C6P2V7 DNA topoisomerase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2V7_9GAMM Length = 876 Score = 81.3 bits (199), Expect = 5e-14 Identities = 64/194 (32%), Positives = 86/194 (44%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY FTA++E ELD++S G W +L ++W F +V E + E Sbjct: 528 FTRYVDYGFTANLEDELDDISEGKRDWIPVLNEFWKGFNKLISEKKDVDRPGTEILEE-- 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFG-AGYFIGCDQHPRCKYIAKTLYSSDDDD 358 CP C G + K R G G FIGC +P C Y ++L +D Sbjct: 586 --------------TCPKC--GKPLSK--RLGKRGSFIGCTGYPECDY-TRSLGGEEDAG 626 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPHVK 532 E K LG + +N+ +LL GPYG YVQLGE +G PKR S P Sbjct: 627 -----------ESRKELGQHPDTNQLVLLLRGPYGPYVQLGEMIEGEKTKPKRVSWPKEL 675 Query: 533 DVDSITLEDALVLL 574 ++ L AL LL Sbjct: 676 PLEQADLPSALKLL 689 [206][TOP] >UniRef100_C1MSJ2 DNA topoisomerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MSJ2_9CHLO Length = 1243 Score = 80.5 bits (197), Expect = 9e-14 Identities = 62/239 (25%), Positives = 105/239 (43%), Gaps = 48/239 (20%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E DY FTA +E +LD++++G +WK ++ +W F + N+ V +L+ Sbjct: 693 FDEYVDYGFTAGLEDKLDDIASGDAEWKDVMSKFWKPFHGDVQGLQNIRTSLVVDVLDAT 752 Query: 182 FADYLFGS------------------------------------LPD-------KSRVCP 232 + FG PD SR CP Sbjct: 753 LGAHFFGDDESETKARLDAIAATAEPPRSEGDAAAPKRAGDAWKSPDYDPATLRASRRCP 812 Query: 233 SCTEGTLIFKVSRFGAGYFIGCDQH---PRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPK 403 +C +G L K+S+ G FIGC + +C Y A+ + +++ DD E + + + + + Sbjct: 813 ACVDGRLGLKLSKNGG--FIGCSNYNTDTKCAY-ARPISTTNGDDAESM-RTDPWLSDGE 868 Query: 404 LLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV--DSITLEDALVLL 574 + G + ++ + ++ GPYG YVQL TP+ + +V +V D +TL AL LL Sbjct: 869 I-GVDPETSRTVSVRRGPYGPYVQLDPTANEGTPRTFGLQNVPEVTADKLTLNVALALL 926 [207][TOP] >UniRef100_B6BVC6 DNA topoisomerase n=1 Tax=beta proteobacterium KB13 RepID=B6BVC6_9PROT Length = 823 Score = 79.0 bits (193), Expect = 2e-13 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 3/194 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + DY FTA++E++LD ++A +W +L ++W F +++ +K+ Sbjct: 530 FDKYVDYEFTANLESDLDEIAADTKEWVPILKNFWQDFN--------------QQISDKE 575 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFG-AGYFIGCDQHPRCKYIAKTLYSSDDDD 358 D + D + CP C G +F SR G G FIGC +P C Y + Sbjct: 576 NIDRAAITQEDINESCPKC--GQALF--SRLGRRGKFIGCSGYPDCDYTRNV-------N 624 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVPHVK 532 EED EP+++ + +++ +LL GPYG Y+Q+G E+ PKR S+P Sbjct: 625 EED------GANEPQVIFHDQETDKDVLLLRGPYGPYLQIGVPEEDSKTKPKRVSIPPNI 678 Query: 533 DVDSITLEDALVLL 574 + S+ + A L+ Sbjct: 679 PISSVNEQVAKQLM 692 [208][TOP] >UniRef100_B6BPC9 DNA topoisomerase n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BPC9_9RICK Length = 860 Score = 78.6 bits (192), Expect = 3e-13 Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 7/189 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS+ DY+FTA +E +LD ++ G W +L +W F + +V +L + Sbjct: 522 FSKYVDYNFTAGLEDQLDEITTGKESWIKVLEMFWKDFNNNVSEVKEKRTREVLDLLNES 581 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +F D R C C G+L K S F G FIGC +P CK+ Sbjct: 582 LGTLIFDKDADGKVVRKCQLCETGSLSLKNS-FRGGAFIGCSNYPECKFTRPL------- 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-----DRKGYTPKRASV 520 + + EPK +G + N+ I LK+G +G Y+Q + ++ T K+ V Sbjct: 634 -SKAKAAAQAQLAEPKFIGKHENGND-IFLKNGRFGPYLQYEKILDELPQEKTTKKKKKV 691 Query: 521 PHVKDVDSI 547 + DV+ + Sbjct: 692 KKLNDVNEL 700 [209][TOP] >UniRef100_Q5VMY4 DNA topoisomerase n=1 Tax=Oryza sativa Japonica Group RepID=Q5VMY4_ORYSJ Length = 896 Score = 75.5 bits (184), Expect = 3e-12 Identities = 34/53 (64%), Positives = 40/53 (75%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQV 160 FSEV D SFTA+METELDNVSAG T+WKGLL D+W RF YC S + + +V Sbjct: 837 FSEVADLSFTANMETELDNVSAGSTEWKGLLKDFWERFNKYCGDASRLDVRKV 889 [210][TOP] >UniRef100_UPI0000E87F44 DNA topoisomerase I n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F44 Length = 828 Score = 74.7 bits (182), Expect = 5e-12 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 2/176 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY FTA++E+ELD+++A W ++ +W +F ++++ EK Sbjct: 529 FTNYVDYDFTANLESELDDIAADKKNWLEVIRIFWDQF--------------IKQVKEKG 574 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 D + D CP C + L+ K+ + G F+ C +P C + + Sbjct: 575 DLDRAKITQKDIGEDCPKCNK-PLLSKLGK--RGNFVACSGYPDCDFTRSS--------N 623 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG--EDRKGYTPKRASVP 523 D PQ EPK++G + + + I L GPYG Y+QLG ED PKR ++P Sbjct: 624 GDLPQ------EPKIVGEDELTKKSIYLLIGPYGPYLQLGIPEDGDKVKPKRTTIP 673 [211][TOP] >UniRef100_C1E9E3 DNA topoisomerase n=1 Tax=Micromonas sp. RCC299 RepID=C1E9E3_9CHLO Length = 1227 Score = 74.7 bits (182), Expect = 5e-12 Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 48/228 (21%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E DY FTA +E LD++++G WK +L +W F E + QV +L+ Sbjct: 709 FDEYVDYGFTAGLEDRLDDIASGKEDWKSVLSGFWGPFAGDVESLKGIRTSQVVDVLDAT 768 Query: 182 FADYLFGSLPDKSRV---------------------------------------CPSCTE 244 + FG D+S V CP C Sbjct: 769 LGAHFFGD--DESSVDARLSAIERAAEEAATQAESTGGYPTVAFDPEELSSTRRCPGCGT 826 Query: 245 GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKLLGFNSG 424 G L K+SR G FIGC +P C + + + +D + N IE LG + Sbjct: 827 GRLGLKLSRTGG--FIGCSNYPSCGHTRQLV----NDGDGAVGGGNFPIE----LGTDPE 876 Query: 425 SNEKILLKSGPYGIYVQL-----GEDRKGYTPKRASVPHV----KDVD 541 S + +++GPYG Y++L +D K P+R + ++ +DVD Sbjct: 877 SGGDVAIQNGPYGPYIELQMPSSPDDSKKTKPQRFGLKNIGLKPEDVD 924 [212][TOP] >UniRef100_C6WSV7 DNA topoisomerase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WSV7_METML Length = 864 Score = 73.6 bits (179), Expect = 1e-11 Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 5/196 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ DY FTA++E LD+V+ G W L+ ++W F ++V E + E Sbjct: 528 FTKYVDYDFTANLENALDSVAEGERDWVPLMDEFWQDFNQQIHNKADVERPGNELIDE-- 585 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGC---DQHPRCKYIAKTLYSSDD 352 CP C + L ++SRFG+ FIGC + P+C Y Sbjct: 586 --------------ACPKCGK-PLQKQLSRFGS--FIGCTGYNDTPKCDYKRSI------ 622 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASVPH 526 + T T +P +G ++ ++++I L +GPYG Y+Q+G +G PKR S+P Sbjct: 623 ---DGTANAGT---DPVSIGVDAATSKEIYLMNGPYGPYLQVGMAVEGEKKKPKRVSIPK 676 Query: 527 VKDVDSITLEDALVLL 574 + + LE A +LL Sbjct: 677 EIALADVNLETANMLL 692 [213][TOP] >UniRef100_C8WFK4 DNA topoisomerase I n=1 Tax=Zymomonas mobilis subsp. mobilis NCIMB 11163 RepID=C8WFK4_ZYMMO Length = 1221 Score = 73.6 bits (179), Expect = 1e-11 Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 5/143 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA +E LD +S G W+ +L +W FK + L+K Sbjct: 515 FERYVSYDFTAGLEDSLDEISGGRADWQKVLDAFWHDFKPKTAEVMEQQPSAITAELDKF 574 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 +LF PDK R CPSC G L K RFGA FI C +P CKY + Sbjct: 575 LEPWLF---PDKGDGHDPRECPSCHTGRLALKGGRFGA--FIACSNYPECKYTRG--FGQ 627 Query: 347 DDDDEEDTPQQNTTIEEPKLLGF 415 +D +D EP LLG+ Sbjct: 628 GEDGVDD--------NEPVLLGY 642 [214][TOP] >UniRef100_C5TGR1 DNA topoisomerase n=1 Tax=Zymomonas mobilis subsp. mobilis ATCC 10988 RepID=C5TGR1_ZYMMO Length = 1217 Score = 73.6 bits (179), Expect = 1e-11 Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 5/143 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA +E LD +S G W+ +L +W FK + L+K Sbjct: 515 FERYVSYDFTAGLEDSLDEISGGRADWQKVLDAFWHDFKPKTAEVMEQQPSAITAELDKF 574 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 +LF PDK R CPSC G L K RFGA FI C +P CKY + Sbjct: 575 LEPWLF---PDKGDGHDPRECPSCHTGRLALKGGRFGA--FIACSNYPECKYTRG--FGQ 627 Query: 347 DDDDEEDTPQQNTTIEEPKLLGF 415 +D +D EP LLG+ Sbjct: 628 GEDGVDD--------NEPVLLGY 642 [215][TOP] >UniRef100_Q9X3X7 DNA topoisomerase 1 n=1 Tax=Zymomonas mobilis RepID=TOP1_ZYMMO Length = 1217 Score = 73.6 bits (179), Expect = 1e-11 Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 5/143 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F Y FTA +E LD +S G W+ +L +W FK + L+K Sbjct: 520 FERYVSYDFTAGLEDSLDEISGGRADWQKVLDAFWHDFKPKTAEVMEQQPSAITAELDKF 579 Query: 182 FADYLFGSLPDKS-----RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 +LF PDK R CPSC G L K RFGA FI C +P CKY + Sbjct: 580 LEPWLF---PDKGDGHDPRECPSCHTGRLALKGGRFGA--FIACSNYPECKYTRG--FGQ 632 Query: 347 DDDDEEDTPQQNTTIEEPKLLGF 415 +D +D EP LLG+ Sbjct: 633 GEDGVDD--------NEPVLLGY 647 [216][TOP] >UniRef100_Q1UZD4 DNA topoisomerase n=1 Tax=Candidatus Pelagibacter ubique HTCC1002 RepID=Q1UZD4_PELUB Length = 863 Score = 73.2 bits (178), Expect = 1e-11 Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 2/160 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS+ DY+FTA +E +LD+++ G W +L +W F +V +L Sbjct: 522 FSKYVDYNFTASLENQLDDITTGKEGWIKVLELFWKDFNQNVSDVKEKRTREVLDLLNDS 581 Query: 182 FADYLFGSLPDK--SRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +F D +R C C G+L K S F G FIGC +P CK+ Sbjct: 582 LGSLIFERDADGNINRQCKLCDSGSLSLKNS-FRGGAFIGCSNYPDCKFTRPL------- 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQ 475 + + + EPK +G + N+ + LK+G +G Y+Q Sbjct: 634 -SKAKAAAQSQLAEPKFIGKHENGND-MYLKNGRFGPYLQ 671 [217][TOP] >UniRef100_A5G7S4 DNA topoisomerase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G7S4_GEOUR Length = 756 Score = 72.0 bits (175), Expect = 3e-11 Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 2/159 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ DY+FTA +E ELD VS G KWK LL D+W F++ +L++K Sbjct: 526 FTKYVDYNFTASLEEELDRVSRGEKKWKPLLHDFWEPFQT---------------LLKQK 570 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 + L ++ +CP C++ L+ K+ +FG F C +P CKYI D Sbjct: 571 EGEVNKSDLTTEATDEICPECSK-PLVVKLGKFGK--FFACSGYPECKYIRPL-----DK 622 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYV 472 D++D + + E+ G ++L+K G +G Y+ Sbjct: 623 DKKDVAEPVISEEKCDKCG------SQMLIKEGRFGKYL 655 [218][TOP] >UniRef100_Q4FLQ1 DNA topoisomerase n=1 Tax=Candidatus Pelagibacter ubique RepID=Q4FLQ1_PELUB Length = 863 Score = 71.6 bits (174), Expect = 4e-11 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 2/160 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS+ DY+FTA +E +LD+++ G W +L +W F +V +L Sbjct: 522 FSKYVDYNFTASLENQLDDITTGKEGWIKVLELFWKDFNQNVSDVKEKRTREVLDLLNDS 581 Query: 182 FADYLF--GSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 +F + + +R C C G+L K S F G FIGC +P CK+ Sbjct: 582 LGSLIFERDTEGNINRQCKLCNGGSLSLKNS-FRGGAFIGCSNYPDCKFTRPL------- 633 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQ 475 + + + EPK +G + N+ + LK+G +G Y+Q Sbjct: 634 -SKAKAAAQSQLAEPKFIGKHENGND-MYLKNGRFGPYLQ 671 [219][TOP] >UniRef100_C8SRW7 DNA topoisomerase type IA zn finger domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SRW7_9RHIZ Length = 291 Score = 70.1 bits (170), Expect = 1e-10 Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 2/137 (1%) Frame = +2 Query: 170 LEKKFADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYS 343 L ++ A +F + D S R+CP C G L K+ +FGA F+GC +P C + + + Sbjct: 5 LNEELAPLVFPAREDGSNPRICPKCGTGNLSLKLGKFGA--FVGCSNYPECSFTRQLGDA 62 Query: 344 SDDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVP 523 ++ + E + T K+LG + + E+I L+SG +G Y+Q G+ G KR+S+P Sbjct: 63 ANPNGENGGGEDGT-----KVLGKDPYTAEEITLRSGRFGPYIQRGD---GKEAKRSSLP 114 Query: 524 HVKDVDSITLEDALVLL 574 +SI E AL LL Sbjct: 115 KGWTPESIDHEKALALL 131 [220][TOP] >UniRef100_Q11AC4 DNA topoisomerase n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q11AC4_TRIEI Length = 874 Score = 69.7 bits (169), Expect = 2e-10 Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 7/198 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E D FTA ME LD++S G +W L ++ + E + I + E ++ K Sbjct: 542 FPEFVDVKFTARMEQTLDDISMGEAQWVPYLKKFY-----FGESGLDTQIKEQENQIDPK 596 Query: 182 FA-----DYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS 346 A D L + R+C + +FGA ++ I + L S Sbjct: 597 LARTIELDNLDANSEMTYRIC-----------IGKFGAYIEAENGENIVKASIPEDLTPS 645 Query: 347 DDDDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKG--YTPKRASV 520 D D E+ E P+ LG + ++ I + +G YG YVQLG+D +G PKRAS+ Sbjct: 646 DLDPEQIEKLLKQKTEGPQELGIHPEEDKSIYIMTGRYGPYVQLGDDSEGSKRKPKRASL 705 Query: 521 PHVKDVDSITLEDALVLL 574 P +++ +TL+ A+ LL Sbjct: 706 PKGVNMEDVTLDLAVGLL 723 [221][TOP] >UniRef100_UPI0000382C8D COG1754: Uncharacterized C-terminal domain of topoisomerase IA n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382C8D Length = 349 Score = 68.9 bits (167), Expect = 3e-10 Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 3/119 (2%) Frame = +2 Query: 227 CPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDEEDTPQQNTTIEEPKL 406 CP+C L K+ +FGA FIGC +P CKY + L +S + E D ++ Sbjct: 50 CPTCGSAQLSLKLGKFGA--FIGCSNYPECKY-TRQLSASGVEGEGDGSSAEGGQPGVRV 106 Query: 407 LGFNSGSNEKILLKSGPYGIYVQLGE---DRKGYTPKRASVPHVKDVDSITLEDALVLL 574 LG + + + L+ G +G +VQLGE ++ PKR+S+P S+TLE AL LL Sbjct: 107 LGDDPATGLPVTLRDGRFGPFVQLGEASSEKGAEKPKRSSLPKGMTPSSVTLEIALRLL 165 [222][TOP] >UniRef100_A5EWL4 DNA topoisomerase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWL4_DICNV Length = 802 Score = 68.2 bits (165), Expect = 4e-10 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F DY FTAD+E ELD ++ G +WK LL D+W +FK+ E+ S + +V + E Sbjct: 522 FQRYVDYDFTADLEDELDAIARGEQEWKPLLKDFWAQFKAQIEKKSEISREEVMQARE-- 579 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSS--DDD 355 G P T T+ + RFG IG K L++S +D Sbjct: 580 -----LGMDPK--------TGKTVTARFGRFGPFVQIGSKDDAE-----KPLFASIPEDW 621 Query: 356 DEEDTPQQNT--TIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHV 529 D E +N + P+ LG + +E+I++ +G +G YV+ G K S+P Sbjct: 622 DFEKISLENALELFKLPRNLG-KTEEDEEIVINNGRFGPYVRFGR-------KFVSLPKD 673 Query: 530 KDVDSITLEDALVLL 574 +D +I+ E AL L+ Sbjct: 674 EDPLTISKERALELI 688 [223][TOP] >UniRef100_B9M5T5 DNA topoisomerase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M5T5_GEOSF Length = 755 Score = 67.8 bits (164), Expect = 6e-10 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 2/159 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ DY+FTA +E ELD VS G KWK LL ++W F +L++K Sbjct: 525 FTKYVDYNFTASLEEELDQVSRGEKKWKPLLHEFWQPF---------------HNLLKQK 569 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDD 355 + L ++ +CP C + L+ K+ +FG F C +P CKYI D Sbjct: 570 EGEVNKSDLTTEATDEICPECGK-PLVVKLGKFGK--FFACSGYPECKYIRPL-----DK 621 Query: 356 DEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYV 472 D++++ + + E+ + G ++L+K G +G Y+ Sbjct: 622 DKKESAEPVFSEEKCEKCG------SQMLIKEGRFGKYL 654 [224][TOP] >UniRef100_A8G3F0 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G3F0_PROM2 Length = 868 Score = 67.4 bits (163), Expect = 7e-10 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLE-K 178 F ++ D +FTA ME+ LD +S+G +W L ++ + K+ E V + + E ++ K Sbjct: 543 FPDLVDTTFTAKMESSLDEISSGNLEWLPYLETFY-KGKNGLE----VKVQKTEGDIDGK 597 Query: 179 KFADYLFGSLPDKSRVCPS--CTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 + F LP R+ + EGT I D+ L Sbjct: 598 AYRQVDFEDLPCVVRIGSNGPWLEGTKI--------------DESGNEIQAKGNLPMDIT 643 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG-EDRKGYTPKRASVPHV 529 + D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P Sbjct: 644 PGDLDIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNSDQDKAKPRRASLPKE 703 Query: 530 KDVDSITLEDALVLL 574 D +TL DAL+LL Sbjct: 704 LKTDDLTLHDALILL 718 [225][TOP] >UniRef100_A3PBF8 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9301 RepID=A3PBF8_PROM0 Length = 868 Score = 67.4 bits (163), Expect = 7e-10 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLE-K 178 F ++ D +FTA ME+ LD +S+G +W L ++ + K+ E V + + E ++ K Sbjct: 543 FPDLVDTTFTAKMESSLDEISSGNLEWLPYLETFY-KGKNGLE----VKVQKTEGDIDGK 597 Query: 179 KFADYLFGSLPDKSRVCPS--CTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 + F LP R+ + EGT I D+ L Sbjct: 598 AYRQVDFEDLPCVVRIGSNGPWLEGTKI--------------DESGNEIQAKGNLPMDIT 643 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG-EDRKGYTPKRASVPHV 529 + D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P Sbjct: 644 PGDLDIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQNKAKPRRASLPKE 703 Query: 530 KDVDSITLEDALVLL 574 D +TL++ALVLL Sbjct: 704 LKTDDLTLDEALVLL 718 [226][TOP] >UniRef100_B9P0I6 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9202 RepID=B9P0I6_PROMA Length = 868 Score = 67.4 bits (163), Expect = 7e-10 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLE-K 178 F ++ D +FTA ME+ LD +S+G +W L ++ + K+ E V + + E ++ K Sbjct: 543 FPDLVDTTFTAKMESSLDEISSGNLEWLPYLETFY-KGKNGLE----VKVQKTEGDIDGK 597 Query: 179 KFADYLFGSLPDKSRVCPS--CTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 + F LP R+ + EGT I D+ L Sbjct: 598 AYRQVDFEDLPCVVRIGSNGPWLEGTKI--------------DESGNEIQAKGNLPMDIT 643 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG-EDRKGYTPKRASVPHV 529 + D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P Sbjct: 644 PGDLDIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNSDQDKAKPRRASLPKE 703 Query: 530 KDVDSITLEDALVLL 574 D +TL DAL+LL Sbjct: 704 LKTDDLTLHDALILL 718 [227][TOP] >UniRef100_A2BPR8 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BPR8_PROMS Length = 868 Score = 67.0 bits (162), Expect = 1e-09 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLE-K 178 F ++ D +FTA ME+ LD +S+G +W L ++ + K+ E + + + E ++ K Sbjct: 543 FPDLVDTTFTAKMESSLDEISSGNLEWLPYLETFY-KGKNGLE----IKVQKTEGNIDGK 597 Query: 179 KFADYLFGSLPDKSRVCPS--CTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 + F LP R+ + EGT I D+ L Sbjct: 598 AYRQVDFEDLPCVVRIGSNGPWLEGTKI--------------DESGNEIQAKGNLPMDIT 643 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG-EDRKGYTPKRASVPHV 529 + D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P Sbjct: 644 PGDLDIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKE 703 Query: 530 KDVDSITLEDALVLL 574 D +TL++ALVLL Sbjct: 704 LKTDDLTLDEALVLL 718 [228][TOP] >UniRef100_Q1PJN8 DNA topoisomerase n=1 Tax=uncultured Prochlorococcus marinus clone HOT0M-10D2 RepID=Q1PJN8_PROMA Length = 726 Score = 67.0 bits (162), Expect = 1e-09 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLE-K 178 F ++ D +FTA ME+ LD +S+G +W L ++ + K+ E V + + E ++ K Sbjct: 401 FPDLVDTTFTAKMESSLDEISSGNLEWLPYLETFY-KGKNGLE----VKVQKTEGDIDGK 455 Query: 179 KFADYLFGSLPDKSRVCPS--CTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 + F LP R+ + EGT I D+ L Sbjct: 456 AYRQVDFEDLPCVVRIGSNGPWLEGTKI--------------DESGNEIQAKGNLPMDIT 501 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG-EDRKGYTPKRASVPHV 529 + D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P Sbjct: 502 PGDLDIKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKE 561 Query: 530 KDVDSITLEDALVLL 574 D +TL++ALVLL Sbjct: 562 LKTDDLTLDEALVLL 576 [229][TOP] >UniRef100_UPI0001698F80 DNA topoisomerase I n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698F80 Length = 424 Score = 66.2 bits (160), Expect = 2e-09 Identities = 49/157 (31%), Positives = 71/157 (45%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ DY FTA +E ELD VS G W LL +WT FK + T K Sbjct: 169 FTQYVDYDFTAKLEDELDAVSRGEEAWVPLLERFWTPFKERIDYTQE----------NVK 218 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 +D +L +K CP C + L ++ R G FIGC+ +P+C Y T + D E Sbjct: 219 RSDVTHEALDEK---CPKCGD-QLSIRLGRHGR--FIGCNNYPKCDY---TRDLNADKSE 269 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYV 472 +D PQ P+ +++K G YG ++ Sbjct: 270 QDEPQVVEGRSCPE-------CGSPLVIKRGRYGKFI 299 [230][TOP] >UniRef100_B6BGF4 DNA topoisomerase n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGF4_9PROT Length = 741 Score = 65.1 bits (157), Expect = 4e-09 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 4/155 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ + D SFTA+ME +LD +S G W+ LL D++ F EK++ K Sbjct: 511 FANIVDISFTANMEEKLDEISEGENDWQKLLSDFYFPFMDQVAEGK-------EKIISLK 563 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 A L R CP C E L+ + RF G F+ C P+CKY + D++ Sbjct: 564 LAKPL-------GRTCPKCGEHELLLRSGRF--GNFVACSGFPKCKYTEQV----DEEGN 610 Query: 362 EDTPQQNTTIEEPKLLG----FNSGSNEKILLKSG 454 + + T+ E G +G N K L SG Sbjct: 611 KIEVKVETSDEACDKCGKEMIVKNGRNGKFLACSG 645 [231][TOP] >UniRef100_Q31C99 DNA topoisomerase n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q31C99_PROM9 Length = 868 Score = 64.7 bits (156), Expect = 5e-09 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 4/195 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLE-K 178 F ++ D +FTA ME+ LD +S+G +W L ++ + K+ E V + + E ++ K Sbjct: 543 FPDLVDTTFTAKMESSLDEISSGNLEWLPYLETFY-KGKNGLE----VKVQKTEGDIDGK 597 Query: 179 KFADYLFGSLPDKSRVCPS--CTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDD 352 + F LP R+ + EG I D+ L Sbjct: 598 AYRQVDFEDLPCVVRIGSNGPWLEGIKI--------------DESGNEIQAKGNLPMDIT 643 Query: 353 DDEEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG-EDRKGYTPKRASVPHV 529 + D Q + + P LG + + EK+ L+ GPYG YVQLG D+ P+RAS+P Sbjct: 644 PGDLDKKQVDQILSGPSDLGTDPKTGEKVFLRFGPYGPYVQLGNNDQDKAKPRRASLPKE 703 Query: 530 KDVDSITLEDALVLL 574 D +TL++ALVLL Sbjct: 704 LKTDDLTLDEALVLL 718 [232][TOP] >UniRef100_A7BKV9 DNA topoisomerase n=1 Tax=Beggiatoa sp. SS RepID=A7BKV9_9GAMM Length = 432 Score = 64.7 bits (156), Expect = 5e-09 Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 5/162 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQ--VEKMLE 175 F + DY FTA +E ELD VS G +W L+ +W++FK + + Q +++LE Sbjct: 246 FQQYVDYDFTAKLEDELDAVSRGEQEWIPLMDRFWSKFKGRVDEKAKTVQRQEFTQEILE 305 Query: 176 KKFADYLFGSLPDKSRVCPSCTEGTLIFKVSRFG-AGYFIGCDQHPRCKYIAKTLYSSDD 352 + CP C+ R G G+FIGC +P+C Y+ + Sbjct: 306 E---------------ACPKCSSPL----NKRLGKRGFFIGCSAYPKCD------YTRNL 340 Query: 353 DDEEDTPQQNTTIEEPKLLGFNS--GSNEKILLKSGPYGIYV 472 + EE + T + EP+++ + + K GPYG ++ Sbjct: 341 EGEEANNNEPTAVAEPEIVEGRTCPKCGSAVHKKKGPYGQFI 382 [233][TOP] >UniRef100_Q4C5N4 DNA topoisomerase n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C5N4_CROWT Length = 880 Score = 64.3 bits (155), Expect = 6e-09 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F ++ D FT+ ME LD ++ G +W L +++ + + V I Q++ + K Sbjct: 542 FPDLVDAKFTSKMEQTLDEIATGEAQWVPYLKKFYSGEEGLDSQVK-VGIDQIDPGVAKA 600 Query: 182 F-ADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 D L E T+ K+ +FG + ++ I L SD D Sbjct: 601 INLDNL---------------EATV--KIGKFGPYVEVLQEEEKITASIPTDLTPSDLDP 643 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 535 E+ E P+ LG + + E I + G YG YVQLGE + PKRAS+P + Sbjct: 644 EQINKLLKQKTEGPQKLGLHPENGEAIYILIGSYGPYVQLGEASEENKKPKRASLPKGTN 703 Query: 536 VDSITLEDALVLL 574 VD +TL+ A+ LL Sbjct: 704 VDDVTLDMAVGLL 716 [234][TOP] >UniRef100_C1ZEL8 DNA topoisomerase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZEL8_PLALI Length = 895 Score = 64.3 bits (155), Expect = 6e-09 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 1/189 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS + D FTA ME +LD+++ G + L +++ E + + Q E ++ + Sbjct: 549 FSRLVDLQFTARMEQDLDDIANGQAERLPYLKSFYSG-----ETGLDEQVKQNEAGIDPR 603 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLI-FKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 A C +G ++ +FGA + D P I + +D + Sbjct: 604 EA-------------CTLDIDGVNAKVRLGKFGAFFEGERDGQPVTATIPDDIAPADLTN 650 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDV 538 E + P+ LG + S I L GP+G Y+QLGE + G P+R S+P +DV Sbjct: 651 ELAEKLITQKSQGPQSLGIDPESGLPIFLLIGPFGPYLQLGEMKDGEKPRRVSIPKTRDV 710 Query: 539 DSITLEDAL 565 ++ LEDAL Sbjct: 711 STVKLEDAL 719 [235][TOP] >UniRef100_A8PP36 DNA topoisomerase n=1 Tax=Rickettsiella grylli RepID=A8PP36_9COXI Length = 774 Score = 64.3 bits (155), Expect = 6e-09 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 2/159 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + DY+FTA +E ELD +S G +W LL D+WT FK+ E T E+ +++K Sbjct: 540 FMQYVDYAFTARLEDELDQISRGEKEWVPLLQDFWTPFKTLIETT--------EETVQRK 591 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 D +L + CP C + TL ++ + G FIGC +P C Y Sbjct: 592 --DVTQEALDE---TCPKCGK-TLSIRLGK--RGRFIGCSGYPECDY------------T 631 Query: 362 EDTPQQNTTIEEPKLL--GFNSGSNEKILLKSGPYGIYV 472 + + TT+ EP+++ + +K G YG ++ Sbjct: 632 RNMDGEVTTVSEPEVVQGRLCPDCGHALHIKIGRYGKFI 670 [236][TOP] >UniRef100_P34185 DNA topoisomerase 1 n=2 Tax=Synechococcus elongatus RepID=TOP1_SYNE7 Length = 883 Score = 64.3 bits (155), Expect = 6e-09 Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 1/192 (0%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F ++ D SF+A ME LD++S G W L ++ R E + +++ + Sbjct: 542 FPDLVDTSFSARMEQSLDDISNGEVDWLPYLSQFY-RGDRGLEEQVKLRESEIDPAAART 600 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 A LP K R+ RFGA D P + K L +D D + Sbjct: 601 VA---LEGLPAKVRI-------------GRFGAYLEAEADGEPIKANLPKELTPADLDVQ 644 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLG-EDRKGYTPKRASVPHVKDV 538 E P LG + ++E I L +G YG YVQLG + PKRAS+P + Sbjct: 645 RVETLLRQKTEGPDQLGTHPETDEPIYLLTGAYGPYVQLGAATEEKPKPKRASLPKGMSL 704 Query: 539 DSITLEDALVLL 574 ++I+LE A+ LL Sbjct: 705 ETISLEQAVGLL 716 [237][TOP] >UniRef100_A7BSD2 DNA topoisomerase n=1 Tax=Beggiatoa sp. PS RepID=A7BSD2_9GAMM Length = 783 Score = 62.4 bits (150), Expect = 2e-08 Identities = 39/107 (36%), Positives = 54/107 (50%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS DY FTA +E +LD VS G +W L+ +W++FK+ + EKM + Sbjct: 541 FSRYVDYDFTAKLEDQLDEVSRGEQEWIPLMHRFWSQFKTLVD----------EKMQTVQ 590 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKY 322 D +L +K CP C LI ++S+ G FIGC P CKY Sbjct: 591 KKDIAQETLDEK---CPQC-GSQLIIRLSK--RGRFIGCSAFPNCKY 631 [238][TOP] >UniRef100_P55991 DNA topoisomerase 1 n=1 Tax=Helicobacter pylori RepID=TOP1_HELPY Length = 736 Score = 62.4 bits (150), Expect = 2e-08 Identities = 39/121 (32%), Positives = 62/121 (51%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E+ D F+A +E ELDN++ ++ +L D++ F E I Q K+ EK Sbjct: 511 FEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQ--KVHEKT 568 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 + CP C G L+ K SR+G FI C+ +P+CKY+ +T ++D+ D+ Sbjct: 569 ------------GQSCPKCG-GELVKKNSRYGE--FIACNNYPKCKYVKQTESANDEADQ 613 Query: 362 E 364 E Sbjct: 614 E 614 [239][TOP] >UniRef100_C8S1H8 DNA topoisomerase I n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1H8_9RHOB Length = 685 Score = 62.0 bits (149), Expect = 3e-08 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 2/94 (2%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F +Y FTAD+ET+LD+VSAG +K +L +W F + T+++ I +V +++ Sbjct: 514 FRRYVEYDFTADLETQLDDVSAGSRDYKEVLARFWRDFSAAIAETADLRIGEVLTKIDEF 573 Query: 182 FADYLFGSLPDKS--RVCPSCTEGTLIFKVSRFG 277 A +L+ D S R+C C G L K +R G Sbjct: 574 LAPHLYPLREDGSDPRICQVCGTGRLHLKTARSG 607 [240][TOP] >UniRef100_Q30U79 DNA topoisomerase n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30U79_SULDN Length = 743 Score = 61.2 bits (147), Expect = 5e-08 Identities = 51/186 (27%), Positives = 82/186 (44%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 FS + D SFTA+ME +LD ++ G W+ LL D++ F + E ++ K Sbjct: 511 FSNIVDLSFTANMEEKLDEIAEGQNDWQKLLSDFYGDFLAQVEEGKT-------NIVSLK 563 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 A L R CP C E L+ + RFG FI C P+CKY + + + Sbjct: 564 MATPL-------GRACPKCGE-ELLLRSGRFGE--FIACSAFPKCKYTEQV--EGEKKEG 611 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 E+ Q +++ E G ++++ K+G G ++ GY P K+ Sbjct: 612 EENAQSSSSDEICDKCG------KEMVTKNGRNGPFLAC----SGY-------PDCKNTK 654 Query: 542 SITLED 559 SI +E+ Sbjct: 655 SINVEE 660 [241][TOP] >UniRef100_Q1K217 DNA topoisomerase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K217_DESAC Length = 810 Score = 60.8 bits (146), Expect = 7e-08 Identities = 43/157 (27%), Positives = 72/157 (45%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F++ DY FTA+ E ELD VS G +WK LL +YW F + ++ I + + EK Sbjct: 531 FTKYVDYDFTANFEEELDAVSRGEKQWKPLLKEYWEPFVTLLKQKEQ-EISKADLTTEK- 588 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 ++CP C + L+ K+ R +G F+ C P C++ + L D ++ Sbjct: 589 -----------TDKICPECGK-ELVIKLGR--SGKFLACSGFPDCRH-TEPLEGGDQEEP 633 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYV 472 E + ++ P +L+K G YG ++ Sbjct: 634 EVSEEKCDKCGAP------------MLIKMGRYGKFL 658 [242][TOP] >UniRef100_UPI0001854462 DNA topoisomerase I n=1 Tax=Helicobacter pylori HPKX_438_AG0C1 RepID=UPI0001854462 Length = 226 Score = 60.5 bits (145), Expect = 9e-08 Identities = 39/121 (32%), Positives = 61/121 (50%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E+ D F+A +E ELDN++ ++ +L D++ F E I Q K+ EK Sbjct: 1 FEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQ--KVHEKT 58 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 + CP C G L+ K SR+G FI C+ +P+CKY+ +T +SD ++ Sbjct: 59 ------------GQSCPKCG-GELVKKNSRYGE--FIACNNYPKCKYVKQTENASDGANQ 103 Query: 362 E 364 E Sbjct: 104 E 104 [243][TOP] >UniRef100_Q603G7 DNA topoisomerase n=1 Tax=Methylococcus capsulatus RepID=Q603G7_METCA Length = 768 Score = 60.5 bits (145), Expect = 9e-08 Identities = 51/181 (28%), Positives = 80/181 (44%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F+ DY+FTA++E +LD VS G W L+ ++W F H EK K Sbjct: 530 FNRYVDYNFTANLEDDLDAVSRGEKDWIPLMREFWGPF----------HALIGEKDESLK 579 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 AD ++ +K CP C L ++ R G F+GC +P+CKY T + + E Sbjct: 580 RADVTHEAIDEK---CPEC-GSPLSIRLGR--NGRFVGCTNYPQCKY---TRNLAGKESE 630 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 + P+ + PK + +++K+G YG ++ GY R P K D Sbjct: 631 QTEPEVVEGRQCPK-------CHSPLVIKTGRYGRFIGC----SGYPACRHIEPLEKPTD 679 Query: 542 S 544 + Sbjct: 680 T 680 [244][TOP] >UniRef100_B1VAJ5 DNA topoisomerase n=1 Tax=Candidatus Phytoplasma australiense RepID=B1VAJ5_PHYAS Length = 655 Score = 60.5 bits (145), Expect = 9e-08 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 5/141 (3%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F + DY +TA ME++LD +++GL K L+ ++T F + ++Q+ +K Sbjct: 501 FKQFLDYQYTAQMESDLDKIASGLVDNKQLMQTFYTNF---------LQLYQIADQKLEK 551 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCK-----YIAKTLYSS 346 + + C C EG L+ K S +G+ F+GC + P CK + + S Sbjct: 552 IKPI------ETDQKCNLCNEGNLLIKKSHYGS--FLGCSRFPDCKNTSPWKVQEKNKSK 603 Query: 347 DDDDEEDTPQQNTTIEEPKLL 409 D D T Q+ E LL Sbjct: 604 DSDHSNQTDQKCNLCNEGNLL 624 [245][TOP] >UniRef100_C8NB53 DNA topoisomerase 1 (DNA topoisomerase I) n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NB53_9GAMM Length = 790 Score = 60.5 bits (145), Expect = 9e-08 Identities = 52/191 (27%), Positives = 85/191 (44%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F DY FTA +E +LD VS G WK LLGD+W+ F + ++ +V + E Sbjct: 520 FERYVDYDFTARLEDDLDAVSRGERAWKPLLGDFWSAFSHQLDEKKDIPREEVMQARE-- 577 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 G+ P + + + RFG IG A ++ S + DE Sbjct: 578 -----LGTDPKSGK--------PVSVRFGRFGPFVQIGSKDDEEKPQFA-SIPSDRNMDE 623 Query: 362 EDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGEDRKGYTPKRASVPHVKDVD 541 + + P+++G +S + +I+ G +G YV+ G+ + S+P +D Sbjct: 624 ITLEEALELFKLPRVVG-HSEEDGEIVTSIGRFGPYVRYGK-------RYVSLPKEEDPL 675 Query: 542 SITLEDALVLL 574 +ITLE AL L+ Sbjct: 676 TITLERALELI 686 [246][TOP] >UniRef100_B2URU5 DNA topoisomerase n=1 Tax=Helicobacter pylori Shi470 RepID=B2URU5_HELPS Length = 736 Score = 60.1 bits (144), Expect = 1e-07 Identities = 38/121 (31%), Positives = 61/121 (50%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E+ D F+A +E ELDN++ ++ +L D++ F E I Q K+ EK Sbjct: 511 FEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQ--KVHEKT 568 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 + CP C G L+ K SR+G F+ C+ +PRCKY+ +T ++D ++ Sbjct: 569 ------------GQSCPKCG-GELVKKNSRYGE--FVACNNYPRCKYVKQTENTNDGANQ 613 Query: 362 E 364 E Sbjct: 614 E 614 [247][TOP] >UniRef100_O53042 DNA topoisomerase n=1 Tax=Helicobacter pylori RepID=O53042_HELPY Length = 736 Score = 60.1 bits (144), Expect = 1e-07 Identities = 39/121 (32%), Positives = 61/121 (50%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E+ D F+A +E ELDN++ ++ +L D++ F E I Q K+ EK Sbjct: 511 FEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQ--KVHEKT 568 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 + CP C G L+ K SR+G FI C+ +P+CKYI +T ++D+ + Sbjct: 569 ------------GQSCPKCG-GELVKKNSRYGE--FIACNNYPKCKYIKQTENANDEAKQ 613 Query: 362 E 364 E Sbjct: 614 E 614 [248][TOP] >UniRef100_Q9ZMV7 DNA topoisomerase 1 n=1 Tax=Helicobacter pylori J99 RepID=TOP1_HELPJ Length = 736 Score = 60.1 bits (144), Expect = 1e-07 Identities = 39/121 (32%), Positives = 61/121 (50%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F E+ D F+A +E ELDN++ ++ +L D++ F E I Q K+ EK Sbjct: 511 FEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQ--KVHEKT 568 Query: 182 FADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDDE 361 + CP C G L+ K SR+G FI C+ +P+CKYI +T ++D+ + Sbjct: 569 ------------GQSCPKCG-GELVKKNSRYGE--FIACNNYPKCKYIKQTENANDEAKQ 613 Query: 362 E 364 E Sbjct: 614 E 614 [249][TOP] >UniRef100_B1WVJ8 DNA topoisomerase n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WVJ8_CYAA5 Length = 881 Score = 59.7 bits (143), Expect = 2e-07 Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F ++ D FT+ ME LD ++ G +W L +++ + + V + Q++ + K Sbjct: 542 FPDLVDTKFTSKMEQTLDEIATGEAQWVPYLQKFYSGEEGL-DTQVKVRVDQIDPGVAKA 600 Query: 182 F-ADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 D L ++ K+ +FG + + I L SD + Sbjct: 601 INLDNLDATV-----------------KIGKFGPYVEVLDGEEKITASIPADLTPSDLNP 643 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 535 E+ E P+ LG + + E I + G YG YVQLGE + PKRAS+P Sbjct: 644 EQVNKLLKQKTEGPEKLGLHPETGEPIYVLIGSYGPYVQLGEATEENKKPKRASLPKGTS 703 Query: 536 VDSITLEDALVLL 574 V+ +TLE A+ LL Sbjct: 704 VEDVTLEMAVGLL 716 [250][TOP] >UniRef100_A3ILD7 DNA topoisomerase n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ILD7_9CHRO Length = 881 Score = 59.7 bits (143), Expect = 2e-07 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 2/193 (1%) Frame = +2 Query: 2 FSEVTDYSFTADMETELDNVSAGLTKWKGLLGDYWTRFKSYCERTSNVHIHQVEKMLEKK 181 F ++ D FT+ ME LD ++ G +W L +++ + + V + Q++ + K Sbjct: 542 FPDLVDTKFTSKMEQTLDEIATGEAQWVPYLQKFYSGEEGL-DTQVKVRVDQIDPGVAKA 600 Query: 182 F-ADYLFGSLPDKSRVCPSCTEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLYSSDDDD 358 D L ++ K+ +FG I + I L SD + Sbjct: 601 INLDNLDATV-----------------KIGKFGPYVEIEQGEEKITASIPADLTPSDLNP 643 Query: 359 EEDTPQQNTTIEEPKLLGFNSGSNEKILLKSGPYGIYVQLGE-DRKGYTPKRASVPHVKD 535 E+ E P+ LG + + E I + G YG YVQLGE + PKRAS+P Sbjct: 644 EQVNKLLKQKTEGPEKLGLHPETGEPIYILIGSYGPYVQLGEVSEENKKPKRASLPKGTK 703 Query: 536 VDSITLEDALVLL 574 ++ +TL+ A+ LL Sbjct: 704 IEDVTLDMAVGLL 716