BB909698 ( RCE08553 )

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[1][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  328 bits (841), Expect = 2e-88
 Identities = 160/192 (83%), Positives = 173/192 (90%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           RYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VY
Sbjct: 326 RYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVY 385

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK
Sbjct: 386 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 445

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
           LD G++QAPLD +AIFSSLYWLTP K KFH  QK S + GEVDVIEEL+LNVNVALMELY
Sbjct: 446 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELY 505

Query: 543 LHNDSKEFQRVQ 578
           LHND  EFQRV+
Sbjct: 506 LHNDVAEFQRVR 517

[2][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  328 bits (841), Expect = 2e-88
 Identities = 160/192 (83%), Positives = 173/192 (90%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            RYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VY
Sbjct: 1768 RYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVY 1827

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK
Sbjct: 1828 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 1887

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
            LD G++QAPLD +AIFSSLYWLTP K KFH  QK S + GEVDVIEEL+LNVNVALMELY
Sbjct: 1888 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELY 1947

Query: 543  LHNDSKEFQRVQ 578
            LHND  EFQRV+
Sbjct: 1948 LHNDVAEFQRVR 1959

[3][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
           RepID=UPI0000163E03
          Length = 824

 Score =  328 bits (840), Expect = 2e-88
 Identities = 157/192 (81%), Positives = 173/192 (90%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           RYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VY
Sbjct: 326 RYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVY 385

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK
Sbjct: 386 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 445

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
           LD G++QAPLD +AIFSSLYWLTP K KFH  Q+AS + G VDV+EEL+LNVNVALMELY
Sbjct: 446 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELY 505

Query: 543 LHNDSKEFQRVQ 578
           LHND +EF RV+
Sbjct: 506 LHNDPREFSRVR 517

[4][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  328 bits (840), Expect = 2e-88
 Identities = 157/192 (81%), Positives = 173/192 (90%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            RYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VY
Sbjct: 1766 RYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVY 1825

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK
Sbjct: 1826 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 1885

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
            LD G++QAPLD +AIFSSLYWLTP K KFH  Q+AS + G VDV+EEL+LNVNVALMELY
Sbjct: 1886 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELY 1945

Query: 543  LHNDSKEFQRVQ 578
            LHND +EF RV+
Sbjct: 1946 LHNDPREFSRVR 1957

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI00017F0C90
          Length = 826

 Score =  282 bits (721), Expect = 2e-74
 Identities = 139/193 (72%), Positives = 162/193 (83%), Gaps = 1/193 (0%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           RYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK  F   VCL+VY
Sbjct: 324 RYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVY 383

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-L 359
           GDDNLISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE KPF ELDFLKRKF +
Sbjct: 384 GDDNLISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYV 443

Query: 360 KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539
             + G + APLD +AIFS L+WLTP K KF   +KA  Y GEVDV+EEL++NVNV+L+EL
Sbjct: 444 HPEHGQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVEL 503

Query: 540 YLHNDSKEFQRVQ 578
           YLHND +EF RV+
Sbjct: 504 YLHNDKEEFNRVR 516

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  282 bits (721), Expect = 2e-74
 Identities = 139/193 (72%), Positives = 162/193 (83%), Gaps = 1/193 (0%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            RYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK  F   VCL+VY
Sbjct: 1750 RYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVY 1809

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-L 359
            GDDNLISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE KPF ELDFLKRKF +
Sbjct: 1810 GDDNLISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYV 1869

Query: 360  KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539
              + G + APLD +AIFS L+WLTP K KF   +KA  Y GEVDV+EEL++NVNV+L+EL
Sbjct: 1870 HPEHGQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVEL 1929

Query: 540  YLHNDSKEFQRVQ 578
            YLHND +EF RV+
Sbjct: 1930 YLHNDKEEFNRVR 1942

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI00003FE52F
          Length = 846

 Score =  211 bits (537), Expect = 3e-53
 Identities = 111/192 (57%), Positives = 135/192 (70%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           R A  GQ+V +V  GLPSGFALTVV+NSVFNEIL+RY ++ L   P++  F   V L+VY
Sbjct: 334 RLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVY 393

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDDNL+S     A +FNGE I+ TL +K V ITDGSDK AP I+ K   ELDFLKR+FLK
Sbjct: 394 GDDNLMSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLK 453

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
           L+TGV+QAPLD+TAIFS L+W+TP   K        Q    VD + EL LNV VAL ELY
Sbjct: 454 LETGVVQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELY 512

Query: 543 LHNDSKEFQRVQ 578
           LH + +EFQRV+
Sbjct: 513 LHGNKEEFQRVR 524

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  211 bits (537), Expect = 3e-53
 Identities = 111/192 (57%), Positives = 135/192 (70%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R A  GQ+V +V  GLPSGFALTVV+NSVFNEIL+RY ++ L   P++  F   V L+VY
Sbjct: 1824 RLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVY 1883

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNL+S     A +FNGE I+ TL +K V ITDGSDK AP I+ K   ELDFLKR+FLK
Sbjct: 1884 GDDNLMSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLK 1943

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
            L+TGV+QAPLD+TAIFS L+W+TP   K        Q    VD + EL LNV VAL ELY
Sbjct: 1944 LETGVVQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELY 2002

Query: 543  LHNDSKEFQRVQ 578
            LH + +EFQRV+
Sbjct: 2003 LHGNKEEFQRVR 2014

[9][TOP]
>UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA9_9SECO
          Length = 985

 Score =  187 bits (475), Expect = 5e-46
 Identities = 97/192 (50%), Positives = 125/192 (65%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F Q VCLIVY
Sbjct: 601  RWSICGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRVTVPRPLVNNFNQEVCLIVY 660

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLISV P    +FNG+ I+  LA+ KV ITDGSDK++P +  KP  +LDFLKR F  
Sbjct: 661  GDDNLISVKPDTMKYFNGDRIKEVLAKFKVTITDGSDKNSPVLRAKPLKQLDFLKRGFKV 720

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
               G + APLD+ AIFSSLY++ P                + + +  L LN  VAL ELY
Sbjct: 721  QSDGRVLAPLDLQAIFSSLYYINP----------------QGNTLNSLFLNAQVALRELY 764

Query: 543  LHNDSKEFQRVQ 578
            LHND ++F  V+
Sbjct: 765  LHNDIEQFTAVR 776

[10][TOP]
>UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus
           RepID=UPI00003FE53F
          Length = 711

 Score =  186 bits (472), Expect = 1e-45
 Identities = 95/192 (49%), Positives = 127/192 (66%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           R++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVY
Sbjct: 327 RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 386

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDDNLIS+ P    +FNGE I+  LA+ KV ITDGSDK++P +  KP  +LDFLKR F  
Sbjct: 387 GDDNLISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 446

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
              G + APLD+ AI+SSLY++ P                + ++++ L LN  VAL ELY
Sbjct: 447 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELY 490

Query: 543 LHNDSKEFQRVQ 578
           LH D ++F  V+
Sbjct: 491 LHGDVEQFTAVR 502

[11][TOP]
>UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA7_9SECO
          Length = 985

 Score =  186 bits (472), Expect = 1e-45
 Identities = 95/192 (49%), Positives = 127/192 (66%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVY
Sbjct: 601  RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 660

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLIS+ P    +FNGE I+  LA+ KV ITDGSDK++P +  KP  +LDFLKR F  
Sbjct: 661  GDDNLISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 720

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
               G + APLD+ AI+SSLY++ P                + ++++ L LN  VAL ELY
Sbjct: 721  ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELY 764

Query: 543  LHNDSKEFQRVQ 578
            LH D ++F  V+
Sbjct: 765  LHGDVEQFTAVR 776

[12][TOP]
>UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE
            RASPBERRY) RepID=POL1_TORVR
          Length = 2197

 Score =  186 bits (472), Expect = 1e-45
 Identities = 95/192 (49%), Positives = 127/192 (66%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVY
Sbjct: 1813 RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 1872

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLIS+ P    +FNGE I+  LA+ KV ITDGSDK++P +  KP  +LDFLKR F  
Sbjct: 1873 GDDNLISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 1932

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
               G + APLD+ AI+SSLY++ P                + ++++ L LN  VAL ELY
Sbjct: 1933 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELY 1976

Query: 543  LHNDSKEFQRVQ 578
            LH D ++F  V+
Sbjct: 1977 LHGDVEQFTAVR 1988

[13][TOP]
>UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA8_9SECO
          Length = 985

 Score =  185 bits (470), Expect = 2e-45
 Identities = 95/192 (49%), Positives = 125/192 (65%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVY
Sbjct: 601  RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 660

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLIS+ P    +FNGE I+  LA  KV ITDGSDK++P +  KP  +LDFLKR F  
Sbjct: 661  GDDNLISIKPDTMKYFNGEQIKTILARYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 720

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
               G + APLD+ AI+SSLY++ P                + +++  L LN  VAL ELY
Sbjct: 721  ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELY 764

Query: 543  LHNDSKEFQRVQ 578
            LH D ++F  V+
Sbjct: 765  LHGDVEQFTAVR 776

[14][TOP]
>UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus
            RepID=Q9QRA6_9SECO
          Length = 985

 Score =  185 bits (469), Expect = 2e-45
 Identities = 95/192 (49%), Positives = 125/192 (65%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R++  GQ+VF+V  G+PSG ALTV++NS+FNE+LIRY YR   P+P    F+Q VCLIVY
Sbjct: 601  RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 660

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLIS+ P    +FNGE I+  LA  KV ITDGSDK++P +  KP  +LDFLKR F  
Sbjct: 661  GDDNLISIKPDTMKYFNGEQIKTILANIKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 720

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
               G + APLD+ AI+SSLY++ P                + +++  L LN  VAL ELY
Sbjct: 721  ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELY 764

Query: 543  LHNDSKEFQRVQ 578
            LH D ++F  V+
Sbjct: 765  LHGDVEQFTAVR 776

[15][TOP]
>UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot
           virus RepID=Q155U1_9SECO
          Length = 711

 Score =  179 bits (455), Expect = 1e-43
 Identities = 91/192 (47%), Positives = 125/192 (65%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           R++  GQ+V++V  G+PSG ALTV++NS+FNE+LI Y YR   P+     F+Q VCLIVY
Sbjct: 327 RWSVCGQRVYEVRAGMPSGCALTVIINSLFNELLIGYVYRVTVPRSLVNNFKQEVCLIVY 386

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDDNLIS+ P    +FNGE I+ TLA+ ++ ITDGSDK++P +  KP  +LDFLKR F  
Sbjct: 387 GDDNLISIKPDTMKYFNGEQIKSTLAKYRITITDGSDKNSPVLRAKPLKQLDFLKRGFRV 446

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
              G + APLD+ AI+SSLY++ P                + +++  L LN  VAL ELY
Sbjct: 447 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELY 490

Query: 543 LHNDSKEFQRVQ 578
           LH D ++F  V+
Sbjct: 491 LHGDVEQFTAVR 502

[16][TOP]
>UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud
            Blight RepID=POL1_TRSVB
          Length = 2304

 Score =  158 bits (399), Expect = 3e-37
 Identities = 92/192 (47%), Positives = 115/192 (59%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R      +VF+V  G+  G ALTV++NSVFNEILIRY Y+ + P PE  RF+  V L+VY
Sbjct: 1826 RKCLARSQVFEVRGGIRRG-ALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVY 1884

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLI+V PS    F GE I+ TLA KK+ ITDGSDK +P +E KP  +LDFLKR FL 
Sbjct: 1885 GDDNLIAVDPSMQKIFTGEVIKKTLARKKITITDGSDKLSPVLEAKPLAQLDFLKRSFLV 1944

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
             D+G +   LD T I+SSL +L                S + D I  L  NV  AL ELY
Sbjct: 1945 SDSGQVMPALDRTCIYSSLLYLR---------------SADCDPIPLLHQNVQNALQELY 1989

Query: 543  LHNDSKEFQRVQ 578
               D +EF  ++
Sbjct: 1990 YRQDREEFDNLR 2001

[17][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score =  157 bits (397), Expect = 6e-37
 Identities = 84/188 (44%), Positives = 113/188 (60%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+VY
Sbjct: 1522 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFNEYVTLLVY 1581

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLI+V PS    FNG+ I+ T+A+ +V ITDGSDK +PT+  KP   LDFLKR F  
Sbjct: 1582 GDDNLIAVDPSILEVFNGDVIKKTMAKWRVTITDGSDKLSPTLTEKPLLSLDFLKRGFKL 1641

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
             D G + APLD TAI+SSL+W+                    DV+  L  N   AL+E++
Sbjct: 1642 ADNGQVYAPLDKTAIYSSLHWVAGRGQ---------------DVMSALKDNARSALIEMW 1686

Query: 543  LHNDSKEF 566
             H D  EF
Sbjct: 1687 AHQDKAEF 1694

[18][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score =  153 bits (387), Expect = 8e-36
 Identities = 85/192 (44%), Positives = 115/192 (59%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           R +  G +V++V  G+PSG ALTV++NS+FNE LIR+ +R       + RF Q V L++Y
Sbjct: 318 RKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIY 377

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDDNLI+V P     FNGE IR  LA+  V ITDGSDK A  IE KP  +LDFLKR+F K
Sbjct: 378 GDDNLIAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRK 437

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
           L+ G + APLD+ ++++SL  +T      H                 L  NV+ AL+ELY
Sbjct: 438 LNDGTVYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELY 482

Query: 543 LHNDSKEFQRVQ 578
           LH +   F  ++
Sbjct: 483 LHGNETWFNHLR 494

[19][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score =  153 bits (387), Expect = 8e-36
 Identities = 85/192 (44%), Positives = 115/192 (59%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G +V++V  G+PSG ALTV++NS+FNE LIR+ +R       + RF Q V L++Y
Sbjct: 1705 RKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIY 1764

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNLI+V P     FNGE IR  LA+  V ITDGSDK A  IE KP  +LDFLKR+F K
Sbjct: 1765 GDDNLIAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRK 1824

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
            L+ G + APLD+ ++++SL  +T      H                 L  NV+ AL+ELY
Sbjct: 1825 LNDGTVYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELY 1869

Query: 543  LHNDSKEFQRVQ 578
            LH +   F  ++
Sbjct: 1870 LHGNETWFNHLR 1881

[20][TOP]
>UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus
            RepID=POL1_GFLV
          Length = 2284

 Score =  151 bits (382), Expect = 3e-35
 Identities = 80/192 (41%), Positives = 118/192 (61%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G +V+    G+PSG ALTVV+NS+F E+L+RY ++K+ P   K  F + V LI Y
Sbjct: 1777 RLSICGNQVYATEAGIPSGCALTVVLNSIFKELLMRYCFKKIVPPVYKECFDRCVVLITY 1836

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDN+ +VA S   +F G+A+++ +A+  V ITDG DK   TI  +P  EL+FLKR F++
Sbjct: 1837 GDDNVFTVAQSVMQYFTGDALKMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVR 1896

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
               G+I APL+  +I SSL ++                S   D++++L+ NVN AL+ELY
Sbjct: 1897 SSGGMINAPLEKLSIMSSLVYIR---------------SDGSDMLQKLLDNVNTALVELY 1941

Query: 543  LHNDSKEFQRVQ 578
            LH D   F+ V+
Sbjct: 1942 LHGDRTYFESVR 1953

[21][TOP]
>UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus
           RepID=UPI00003FE537
          Length = 825

 Score =  150 bits (378), Expect = 9e-35
 Identities = 81/192 (42%), Positives = 118/192 (61%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           R +  G +V++   G+PSG ALTVV+NS+FNE+L+RY Y+K+ P   +  F + V LI Y
Sbjct: 317 RLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITY 376

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDDN+ +V+ S  + F G+A++  +A   V ITDG DK   TI  +P  EL+FLKR F K
Sbjct: 377 GDDNVFTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKK 436

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
            + G+I APL+  +I SSL ++                S   D++++LV NVN AL+ELY
Sbjct: 437 GNGGLIYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELY 481

Query: 543 LHNDSKEFQRVQ 578
           LH D +  + V+
Sbjct: 482 LHQDREYSESVR 493

[22][TOP]
>UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW
            RepID=POL1_ARMVN
          Length = 2284

 Score =  150 bits (378), Expect = 9e-35
 Identities = 81/192 (42%), Positives = 118/192 (61%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G +V++   G+PSG ALTVV+NS+FNE+L+RY Y+K+ P   +  F + V LI Y
Sbjct: 1776 RLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITY 1835

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDN+ +V+ S  + F G+A++  +A   V ITDG DK   TI  +P  EL+FLKR F K
Sbjct: 1836 GDDNVFTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKK 1895

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
             + G+I APL+  +I SSL ++                S   D++++LV NVN AL+ELY
Sbjct: 1896 GNGGLIYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELY 1940

Query: 543  LHNDSKEFQRVQ 578
            LH D +  + V+
Sbjct: 1941 LHQDREYSESVR 1952

[23][TOP]
>UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV
          Length = 2285

 Score =  147 bits (371), Expect = 6e-34
 Identities = 79/192 (41%), Positives = 116/192 (60%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G +V++   G+PSG ALTVV+NS+FNE+L+RY ++K+ P   +  F + V LI Y
Sbjct: 1778 RLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLITY 1837

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDN+ +V+ S    F G+A++  +A   V ITDG DK   TI  +P  EL+FLKR   K
Sbjct: 1838 GDDNVFTVSQSIMESFTGDALKAEMANVGVTITDGKDKSLATIPARPLLELEFLKRGIKK 1897

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
             + G+I APL+  +I SSL ++                S   D++++LV NVN AL+EL+
Sbjct: 1898 GNGGMIYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELF 1942

Query: 543  LHNDSKEFQRVQ 578
            LH D + F  V+
Sbjct: 1943 LHQDKEYFDSVR 1954

[24][TOP]
>UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus
            RepID=O37086_9SECO
          Length = 2150

 Score =  135 bits (339), Expect = 3e-30
 Identities = 78/193 (40%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G++V+ V  G+PSG ALTVV+NS+FNEILIRY YRK+ P P    F + V L+VY
Sbjct: 1756 RRSICGRQVYMVRGGMPSGCALTVVINSIFNEILIRYVYRKVTPAPACNFFNKYVRLMVY 1815

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDDNL+++      +F+G  I+  +A   + ITDG+DK + T+E KP   L+FLKR F  
Sbjct: 1816 GDDNLLTIKEEVIPFFDGPVIKREMASVGITITDGTDKSSLTLERKPLASLEFLKRGFRV 1875

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
             + G++ APLD T++++ L++L  +   F     +               NV   L E+ 
Sbjct: 1876 QENGLVVAPLDKTSMYTRLFYLPLALMAFIPGYFSKG-------------NVKSFLEEIV 1922

Query: 543  LH-NDSKEFQRVQ 578
            LH N  +EF RV+
Sbjct: 1923 LHPNHRREFYRVR 1935

[25][TOP]
>UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO
          Length = 1858

 Score =  135 bits (339), Expect = 3e-30
 Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V
Sbjct: 1472 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 1531

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L+ YGDDNLISV+   A+ FNG  ++  +A+  V ITDG DK +PT+E +     DFLK
Sbjct: 1532 KLVTYGDDNLISVSHVVANVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLK 1591

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F KL+  V  +P + +++++ L+++  +                +D  E  ++N+N  
Sbjct: 1592 RGF-KLNGLVYDSPEEKSSLWAQLHYVNTT---------------SLDKQEAYLVNLNNV 1635

Query: 528  LMELYLHN 551
            L ELY+H+
Sbjct: 1636 LKELYMHS 1643

[26][TOP]
>UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus
           RepID=UPI0000163D09
          Length = 711

 Score =  133 bits (335), Expect = 9e-30
 Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V
Sbjct: 325 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 384

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            L+ YGDDNLISV+   AS FNG  ++  +A+  V ITDG DK +PT+E +     DFLK
Sbjct: 385 KLVTYGDDNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLK 444

Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
           R F KL+  +  +P + +++++ L+++  +                +D  E  ++N+N  
Sbjct: 445 RGF-KLNGLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNV 488

Query: 528 LMELYLHN 551
           L ELY+++
Sbjct: 489 LKELYMYS 496

[27][TOP]
>UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO
          Length = 1858

 Score =  133 bits (335), Expect = 9e-30
 Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V
Sbjct: 1472 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 1531

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L+ YGDDNLISV+   AS FNG  ++  +A+  V ITDG DK +PT+E +     DFLK
Sbjct: 1532 KLVTYGDDNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLK 1591

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F KL+  +  +P + +++++ L+++  +                +D  E  ++N+N  
Sbjct: 1592 RGF-KLNGLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNV 1635

Query: 528  LMELYLHN 551
            L ELY+++
Sbjct: 1636 LKELYMYS 1643

[28][TOP]
>UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO
          Length = 2366

 Score =  128 bits (321), Expect = 4e-28
 Identities = 68/144 (47%), Positives = 96/144 (66%), Gaps = 2/144 (1%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L P  E+  F   V LIVY
Sbjct: 1881 RISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPDIERPFFSNNVVLIVY 1940

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPFWELDFLKRKFL 359
            GDDN++ + P+  S FNG  I+  + E+  +KITDG+DK +P I+ +P  + +FLKR + 
Sbjct: 1941 GDDNVLGIHPNIESVFNGNTIKAYMKEELGIKITDGADKLSPVIDARPLEQCEFLKRTWR 2000

Query: 360  K-LDTGVIQAPLDMTAIFSSLYWL 428
            K    G+ +APL  T+IFS L ++
Sbjct: 2001 KDRQYGLYRAPLVETSIFSCLRYV 2024

[29][TOP]
>UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain
            cherry RepID=POL1_RRVC
          Length = 2367

 Score =  127 bits (318), Expect = 8e-28
 Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 2/144 (1%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R +  G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L P+ E+  F   V LIVY
Sbjct: 1882 RISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVVLIVY 1941

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPFWELDFLKRKFL 359
            GDDN++ + P+  S FNG AI+  + E+  +KITDG+DK +P I  +P  + +FLKR + 
Sbjct: 1942 GDDNVLGIHPNIESAFNGNAIKAYMKEELGIKITDGADKLSPVICARPLEQCEFLKRTWR 2001

Query: 360  K-LDTGVIQAPLDMTAIFSSLYWL 428
            K    G+ +APL  T+I+S L ++
Sbjct: 2002 KDRQYGLYRAPLVETSIYSCLRYV 2025

[30][TOP]
>UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring
           virus RepID=B4ZF31_9SECO
          Length = 73

 Score =  125 bits (313), Expect = 3e-27
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = +3

Query: 54  SGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFN 233
           SGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF  TVCL+VYGDDNLISV+PS ASWF 
Sbjct: 1   SGFALTVVVNSVFNEILIRYAYKKLAPVPERNRFGSTVCLLVYGDDNLISVSPSIASWFT 60

Query: 234 GEAIRVTLAEKK 269
           GEAIR+TLAEKK
Sbjct: 61  GEAIRITLAEKK 72

[31][TOP]
>UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO
          Length = 1851

 Score =  122 bits (305), Expect = 3e-26
 Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  +
Sbjct: 1465 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFI 1524

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L VYGDDNLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLK
Sbjct: 1525 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 1584

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F ++   +  AP D  +++S L++++                  +++ E  ++N+   
Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629

Query: 528  LMELYLHNDSKEFQ 569
            L ELYLH+  +  Q
Sbjct: 1630 LRELYLHSPEEACQ 1643

[32][TOP]
>UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO
          Length = 1851

 Score =  122 bits (305), Expect = 3e-26
 Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  +
Sbjct: 1465 RMAICKKNVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFI 1524

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L VYGDDNLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLK
Sbjct: 1525 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 1584

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F ++   +  AP D  +++S L++++                  +++ E  ++N+   
Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629

Query: 528  LMELYLHNDSKEFQ 569
            L ELYLH+  +  Q
Sbjct: 1630 LRELYLHSPEEARQ 1643

[33][TOP]
>UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus
           RepID=UPI0000163D14
          Length = 711

 Score =  120 bits (302), Expect = 6e-26
 Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 7/197 (3%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           R A     V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL     AP+     F + +
Sbjct: 324 RLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLI 383

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            L+ YGDDNLISV      +F+G+ ++ +LA+  V ITDG DK +  +  +   E DFLK
Sbjct: 384 GLVTYGDDNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLK 443

Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
           R F++  + +  AP D  +++S L+++       +  +K   Y          + NV   
Sbjct: 444 RTFVQRSSTIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNV 488

Query: 528 LMELYLHN--DSKEFQR 572
           L ELY+H+  ++ EF+R
Sbjct: 489 LRELYMHSPREATEFRR 505

[34][TOP]
>UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus
           RepID=UPI0000163CF4
          Length = 710

 Score =  120 bits (302), Expect = 6e-26
 Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           R A   + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  +
Sbjct: 324 RMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFI 383

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            L VYGDDNLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLK
Sbjct: 384 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 443

Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
           R F ++   +  AP D  +++S L++++                  +++ E  ++N+   
Sbjct: 444 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 488

Query: 528 LMELYLHN 551
           L ELYLH+
Sbjct: 489 LRELYLHS 496

[35][TOP]
>UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus
            RepID=POL1_CPMV
          Length = 1866

 Score =  120 bits (302), Expect = 6e-26
 Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 7/197 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            R A     V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL     AP+     F + +
Sbjct: 1479 RLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLI 1538

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L+ YGDDNLISV      +F+G+ ++ +LA+  V ITDG DK +  +  +   E DFLK
Sbjct: 1539 GLVTYGDDNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLK 1598

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F++  + +  AP D  +++S L+++       +  +K   Y          + NV   
Sbjct: 1599 RTFVQRSSTIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNV 1643

Query: 528  LMELYLHN--DSKEFQR 572
            L ELY+H+  ++ EF+R
Sbjct: 1644 LRELYMHSPREATEFRR 1660

[36][TOP]
>UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain
            Kentucky G7) RepID=POL1_BPMV
          Length = 1850

 Score =  120 bits (302), Expect = 6e-26
 Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            R A   + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  +
Sbjct: 1464 RMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFI 1523

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L VYGDDNLISV      +F+G  ++  LA   + ITDG DK + T++ +   E DFLK
Sbjct: 1524 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 1583

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F ++   +  AP D  +++S L++++                  +++ E  ++N+   
Sbjct: 1584 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1628

Query: 528  LMELYLHN 551
            L ELYLH+
Sbjct: 1629 LRELYLHS 1636

[37][TOP]
>UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle
           virus RepID=POL1_APMV
          Length = 729

 Score =  120 bits (301), Expect = 8e-26
 Identities = 67/177 (37%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK----PEKCR-FQQTV 167
           R++ V   V++V  G+PSGF LTVV+N +FNE+L+RY ++K+  +    P +C  F   +
Sbjct: 349 RFSVVKGNVWRVEGGIPSGFPLTVVMNGIFNELLVRYCFKKIMREGGATPLECSAFDSYI 408

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             +VYGDDNLISV+P     FNG+ ++  +A   V ITDG DK  PT+E +P  + DFLK
Sbjct: 409 RFVVYGDDNLISVSPVIHDKFNGKLLKECMARFGVTITDGKDKTLPTLEFRPLEDCDFLK 468

Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGE-VDVIEELVLN 515
           R F++    V  AP + +++++ L++++              Y+G  V+VI EL ++
Sbjct: 469 RGFIQRSELVWDAPEERSSLYTQLHYVSTKMQSLE-----DAYTGNLVNVIRELYMH 520

[38][TOP]
>UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO
          Length = 1851

 Score =  120 bits (300), Expect = 1e-25
 Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 5/194 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  V
Sbjct: 1465 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFV 1524

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L VYGDDNLISV      +F+G  ++  LA   + ITDG DK + T++ +   + DFLK
Sbjct: 1525 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLK 1584

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F ++   +  AP D  +++S L++++                  +++ E  ++N+   
Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629

Query: 528  LMELYLHNDSKEFQ 569
            L ELYLH+  +  Q
Sbjct: 1630 LRELYLHSPEEARQ 1643

[39][TOP]
>UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO
          Length = 1851

 Score =  118 bits (296), Expect = 3e-25
 Identities = 70/194 (36%), Positives = 107/194 (55%), Gaps = 5/194 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  V
Sbjct: 1465 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFV 1524

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             L VYGDDN ISV      +F+G  ++  LA   + ITDG DK + T++ +   + DFLK
Sbjct: 1525 SLCVYGDDNFISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLK 1584

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F ++   +  AP D  +++S L++++                  +++ E  ++N+   
Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629

Query: 528  LMELYLHNDSKEFQ 569
            L ELYLH+  +  Q
Sbjct: 1630 LRELYLHSPEEARQ 1643

[40][TOP]
>UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus
           RepID=Q06RG7_9SECO
          Length = 396

 Score =  115 bits (288), Expect = 2e-24
 Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTV 167
           RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K +        F + V
Sbjct: 126 RYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYV 185

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            ++ YGDDNL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLK
Sbjct: 186 GMVTYGDDNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 245

Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
           R F K   G+   AP +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 246 RGFRKDKNGIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 297

[41][TOP]
>UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO
          Length = 1857

 Score =  115 bits (288), Expect = 2e-24
 Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTV 167
            RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K +        F + V
Sbjct: 1470 RYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYV 1529

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++ YGDDNL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLK
Sbjct: 1530 GMVTYGDDNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 1589

Query: 348  RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
            R F K   G+   AP +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 1590 RGFRKDKNGIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1641

[42][TOP]
>UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO
          Length = 1860

 Score =  115 bits (288), Expect = 2e-24
 Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTV 167
            RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +  K +        F + V
Sbjct: 1473 RYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYV 1532

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++ YGDDNL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLK
Sbjct: 1533 GMVTYGDDNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 1592

Query: 348  RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
            R F K   G+   AP +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 1593 RGFRKDKNGIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644

[43][TOP]
>UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus
           RepID=UPI0000163D04
          Length = 713

 Score =  114 bits (285), Expect = 5e-24
 Identities = 62/183 (33%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           R A     V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L     AP      F+  +
Sbjct: 325 RLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLI 384

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            ++ YGDDNLISV      +F+G  ++  +A   + ITDG DK + T+E +   + DFLK
Sbjct: 385 SMVTYGDDNLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLK 444

Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
           R FLK  + +  AP +  ++++ L+++  +    +   + +  +  V+V+ EL ++    
Sbjct: 445 RGFLKRSSVLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTE 500

Query: 528 LME 536
           ++E
Sbjct: 501 MVE 503

[44][TOP]
>UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus
            RepID=POL1_RCMV
          Length = 1864

 Score =  114 bits (285), Expect = 5e-24
 Identities = 62/183 (33%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            R A     V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L     AP      F+  +
Sbjct: 1476 RLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLI 1535

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++ YGDDNLISV      +F+G  ++  +A   + ITDG DK + T+E +   + DFLK
Sbjct: 1536 SMVTYGDDNLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLK 1595

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R FLK  + +  AP +  ++++ L+++  +    +   + +  +  V+V+ EL ++    
Sbjct: 1596 RGFLKRSSVLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTE 1651

Query: 528  LME 536
            ++E
Sbjct: 1652 MVE 1654

[45][TOP]
>UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus
           RepID=UPI000180D482
          Length = 474

 Score =  112 bits (281), Expect = 2e-23
 Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176
           RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAYR         R  F   V L+
Sbjct: 288 RYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALV 347

Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
           VYGDDNLISV+ + +S FNGE +        + +TDG DK    I  +   + DFLKR F
Sbjct: 348 VYGDDNLISVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNF 407

Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
             L  G    P+   +++  L+++   K               +++ +  V N+N  L E
Sbjct: 408 KVLPDGEWVGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRE 452

Query: 537 LYLHNDSK 560
           L+LH   +
Sbjct: 453 LWLHGSEE 460

[46][TOP]
>UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO
          Length = 1853

 Score =  112 bits (281), Expect = 2e-23
 Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAYR         R  F   V L+
Sbjct: 1473 RYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALV 1532

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S FNGE +        + +TDG DK    I  +   + DFLKR F
Sbjct: 1533 VYGDDNLISVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNF 1592

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
              L  G    P+   +++  L+++   K               +++ +  V N+N  L E
Sbjct: 1593 KVLPDGEWVGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRE 1637

Query: 537  LYLHNDSK 560
            L+LH   +
Sbjct: 1638 LWLHGSEE 1645

[47][TOP]
>UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus
           RepID=Q2TCK2_9SECO
          Length = 709

 Score =  112 bits (279), Expect = 3e-23
 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V
Sbjct: 327 RYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYV 386

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            ++VYGDDNL+SV+     +F+G+ ++  LA  ++ ITDG DK +P ++ +   + DFLK
Sbjct: 387 SMVVYGDDNLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLK 446

Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
           R F   + G+   AP +  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 447 RGF--KNRGLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 496

[48][TOP]
>UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO
          Length = 1853

 Score =  112 bits (279), Expect = 3e-23
 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V
Sbjct: 1471 RYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYV 1530

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++VYGDDNL+SV+     +F+G+ ++  LA  ++ ITDG DK +P ++ +   + DFLK
Sbjct: 1531 SMVVYGDDNLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLK 1590

Query: 348  RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
            R F   + G+   AP +  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 1591 RGF--KNRGLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640

[49][TOP]
>UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus
           RepID=UPI0000163CFC
          Length = 712

 Score =  111 bits (278), Expect = 4e-23
 Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTV 167
           RYA    +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+      P      F   V
Sbjct: 323 RYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFV 382

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            ++ YGDDNL+SV  +    F+G  ++  L    + ITDG DK +P +  +   + DFLK
Sbjct: 383 KMVTYGDDNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLK 442

Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
           R F K    V   P +  ++++ L+++T +  + H               E  ++NV   
Sbjct: 443 RGFKKESDVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNV 487

Query: 528 LMELYLHN 551
           + ELYLH+
Sbjct: 488 IRELYLHD 495

[50][TOP]
>UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus
            (strain DG) RepID=POL1_CPSMV
          Length = 1858

 Score =  111 bits (278), Expect = 4e-23
 Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTV 167
            RYA    +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+      P      F   V
Sbjct: 1469 RYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFV 1528

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++ YGDDNL+SV  +    F+G  ++  L    + ITDG DK +P +  +   + DFLK
Sbjct: 1529 KMVTYGDDNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLK 1588

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527
            R F K    V   P +  ++++ L+++T +  + H               E  ++NV   
Sbjct: 1589 RGFKKESDVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNV 1633

Query: 528  LMELYLHN 551
            + ELYLH+
Sbjct: 1634 IRELYLHD 1641

[51][TOP]
>UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO
          Length = 1860

 Score =  111 bits (277), Expect = 5e-23
 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V
Sbjct: 1473 RYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYV 1532

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++ YGDDNL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLK
Sbjct: 1533 GMVTYGDDNLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 1592

Query: 348  RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
            R F K  +G    +P +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 1593 RGFKKDRSGFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644

[52][TOP]
>UniRef100_B9UKJ7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cocoa necrosis
           virus RepID=B9UKJ7_9SECO
          Length = 76

 Score =  111 bits (277), Expect = 5e-23
 Identities = 53/68 (77%), Positives = 61/68 (89%)
 Frame = +3

Query: 93  NEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKV 272
           +EILIRYAY+KLAPKP++  F  +VCL+VYGDDNLISV+PS ASWF GEAIRV LAEKK+
Sbjct: 9   HEILIRYAYKKLAPKPQRNLFGVSVCLLVYGDDNLISVSPSIASWFTGEAIRVCLAEKKI 68

Query: 273 KITDGSDK 296
           KITDGSDK
Sbjct: 69  KITDGSDK 76

[53][TOP]
>UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot
           virus RepID=B2KL92_9SECO
          Length = 712

 Score =  111 bits (277), Expect = 5e-23
 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           RYA     V++V CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V
Sbjct: 325 RYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYV 384

Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
            ++ YGDDNL+SV+     +F+G+ ++  LA+ KV ITDG DK +P +  +   + DFLK
Sbjct: 385 GMVTYGDDNLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 444

Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
           R F K  +G    +P +  ++++ L+++  +  + H   K +     V+V+ EL +
Sbjct: 445 RGFKKDRSGFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 496

[54][TOP]
>UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1
           RepID=UPI0000231CC7
          Length = 699

 Score =  110 bits (276), Expect = 6e-23
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176
           RYA  G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K        R  F   V ++
Sbjct: 324 RYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMV 383

Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
           VYGDDNLISV+ + +S FNG  +   +    +K+TDG DK    IE +   + DFLKRKF
Sbjct: 384 VYGDDNLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKF 443

Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
            +   G     +    ++  L+++   K               V++ E  + N N  L E
Sbjct: 444 KENADGTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRE 488

Query: 537 LYLHNDSK 560
           L+L +  K
Sbjct: 489 LWLGSPEK 496

[55][TOP]
>UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1
          Length = 1842

 Score =  110 bits (276), Expect = 6e-23
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176
            RYA  G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K        R  F   V ++
Sbjct: 1467 RYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMV 1526

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S FNG  +   +    +K+TDG DK    IE +   + DFLKRKF
Sbjct: 1527 VYGDDNLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKF 1586

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
             +   G     +    ++  L+++   K               V++ E  + N N  L E
Sbjct: 1587 KENADGTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRE 1631

Query: 537  LYLHNDSK 560
            L+L +  K
Sbjct: 1632 LWLGSPEK 1639

[56][TOP]
>UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO
          Length = 1853

 Score =  110 bits (276), Expect = 6e-23
 Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YA+R         R  F   V L+
Sbjct: 1473 RYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAFRMCFADNPMVRESFDTHVSLV 1532

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + ++ FNGE +     +  + +TDG DK    I  +   + DFLKR F
Sbjct: 1533 VYGDDNLISVSDAISAKFNGEFLVDFFLKLSITVTDGVDKTKKGISFRRLADCDFLKRGF 1592

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
              L  G    P+   +++  L+++   K               +++ +  V N+N  L E
Sbjct: 1593 KNLPDGEWIGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRE 1637

Query: 537  LYLH--NDSKEFQR 572
            L+LH  N++ E +R
Sbjct: 1638 LWLHSANEATELRR 1651

[57][TOP]
>UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO
          Length = 1853

 Score =  110 bits (276), Expect = 6e-23
 Identities = 65/176 (36%), Positives = 103/176 (58%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTV 167
            RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V
Sbjct: 1471 RYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMIPVSFDEYV 1530

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++VYGDDNL+SV+     +F+G+ ++  LA   + ITDG DK +P ++ +   + DFLK
Sbjct: 1531 SMVVYGDDNLLSVSEVIKPYFDGKRLKDFLATLHITITDGKDKTSPFLQFRRLEDCDFLK 1590

Query: 348  RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
            R F   + G+   AP D  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 1591 RGF--KNRGLYWDAPEDKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640

[58][TOP]
>UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2
           RepID=UPI0000163DDB
          Length = 697

 Score =  110 bits (275), Expect = 8e-23
 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
           RYA   + +++V  G+PSGF LTVVVNS+ NEIL++YAY    A  P  +  F   V ++
Sbjct: 322 RYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMV 381

Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
           VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 382 VYGDDNLISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 441

Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                G  + P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 442 KMNPDGTWRCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRE 486

Query: 537 LYLHN--DSKEFQ 569
           L+LH+  ++KEF+
Sbjct: 487 LWLHDVAEAKEFR 499

[59][TOP]
>UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO
          Length = 1869

 Score =  110 bits (275), Expect = 8e-23
 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
            RYA   + +++V  G+PSGF LTVVVNS+ NEIL++YAY    A  P  +  F   V ++
Sbjct: 1494 RYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMV 1553

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 1554 VYGDDNLISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 1613

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                 G  + P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 1614 KMNPDGTWRCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRE 1658

Query: 537  LYLHN--DSKEFQ 569
            L+LH+  ++KEF+
Sbjct: 1659 LWLHDVAEAKEFR 1671

[60][TOP]
>UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus
           RepID=UPI0000163DD4
          Length = 699

 Score =  109 bits (273), Expect = 1e-22
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
           RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 324 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 383

Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
           VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 384 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 443

Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 444 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 488

Query: 537 LYLHN--DSKEFQ 569
           L+LH+  ++KEF+
Sbjct: 489 LWLHDVKEAKEFR 501

[61][TOP]
>UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO
          Length = 1870

 Score =  109 bits (273), Expect = 1e-22
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 1554

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 1555 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1614

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                 G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659

Query: 537  LYLHN--DSKEFQ 569
            L+LH+  ++KEF+
Sbjct: 1660 LWLHDVKEAKEFR 1672

[62][TOP]
>UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO
          Length = 1769

 Score =  109 bits (273), Expect = 1e-22
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 1394 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPNVQSNFDAHVSMV 1453

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 1454 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1513

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                 G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 1514 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1558

Query: 537  LYLHN--DSKEFQ 569
            L+LH+  ++KEF+
Sbjct: 1559 LWLHDVREAKEFR 1571

[63][TOP]
>UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO
          Length = 1870

 Score =  109 bits (273), Expect = 1e-22
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 1554

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 1555 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1614

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                 G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659

Query: 537  LYLHN--DSKEFQ 569
            L+LH+  ++KEF+
Sbjct: 1660 LWLHDVKEAKEFR 1672

[64][TOP]
>UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1
          Length = 1842

 Score =  109 bits (273), Expect = 1e-22
 Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176
            RYA  G+ +++V  G+PSGF LTV+VNS+ NEILI+YAY K        R  F   V + 
Sbjct: 1467 RYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTHVAMA 1526

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S FNG  +   +A   +K+TDG DK    IE +     DFLKR+F
Sbjct: 1527 VYGDDNLISVSEAISSRFNGNFLVNFMANLGIKVTDGVDKTKIGIEFRTIENCDFLKRRF 1586

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
             +   G     +    ++  L+++   K               V++ E  + N N  L E
Sbjct: 1587 KENTDGTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRE 1631

Query: 537  LYLHNDSK 560
            L+L +  K
Sbjct: 1632 LWLEDPGK 1639

[65][TOP]
>UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt
           virus 2 RepID=B8Y619_9SECO
          Length = 594

 Score =  109 bits (273), Expect = 1e-22
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
           RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 219 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFGDNPSVQSNFDAHVSMV 278

Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
           VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 279 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 338

Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 339 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILCE 383

Query: 537 LYLHN--DSKEFQ 569
           L+LH+  ++KEF+
Sbjct: 384 LWLHDVKEAKEFR 396

[66][TOP]
>UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO
          Length = 1853

 Score =  108 bits (270), Expect = 3e-22
 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
            RYA     V+KV CG+PSGF LTV+ NS+FNEILIRY+++ +      P      F + V
Sbjct: 1471 RYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMISVSFDEYV 1530

Query: 168  CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
             ++VYGDDNL+SV      +F+G+ ++  LA   + ITDG DK +P ++ +   + DFLK
Sbjct: 1531 SMVVYGDDNLLSVNEVIKPYFDGKRLKEFLATLHITITDGKDKTSPFLQFRCLEDCDFLK 1590

Query: 348  RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512
            R F   + G+   AP +  ++++ L+++  +  + H   K +     V V+ EL +
Sbjct: 1591 RGF--KNRGLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640

[67][TOP]
>UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO
          Length = 1870

 Score =  108 bits (269), Expect = 4e-22
 Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 1554

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 1555 VYGDDNLISVSDAISSRFDGNFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1614

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                 G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659

Query: 537  LYLHN--DSKEFQ 569
            L+LH+  +++EF+
Sbjct: 1660 LWLHDVKEAEEFR 1672

[68][TOP]
>UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO
          Length = 1869

 Score =  108 bits (269), Expect = 4e-22
 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKP-EKCRFQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 1494 RYAMCNRILYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFVDNPIVQSNFDAHVSMV 1553

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
            VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 1554 VYGDDNLISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 1613

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                 G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 1614 KLNPDGTWRSPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRE 1658

Query: 537  LYLHN--DSKEFQ 569
            L+LH+  ++KEF+
Sbjct: 1659 LWLHDVIEAKEFR 1671

[69][TOP]
>UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO
          Length = 280

 Score =  107 bits (268), Expect = 5e-22
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
           RYA   + +++V  G+PSGF LTV+VNS+ NEIL++YAY       P  +  F   V ++
Sbjct: 100 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 159

Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
           VYGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 160 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 219

Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 220 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 264

Query: 537 LYLHN--DSKEF 566
           L+LH+  ++K+F
Sbjct: 265 LWLHDVKEAKDF 276

[70][TOP]
>UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus
           RepID=Q3YC01_9SECO
          Length = 795

 Score =  107 bits (266), Expect = 9e-22
 Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 9/156 (5%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP------EKCRFQQT 164
           RYA  G+ ++KV+CG+PSGF+LTV+VNS+ NE  +R+A++++           +    + 
Sbjct: 427 RYAIAGRNLYKVSCGIPSGFSLTVIVNSLVNEFFLRFAWKRIVRASLGEAFVHRSIMDRE 486

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDG---SDKDAPTIEPKPFWEL 335
           V   VYGDDNL+SV+   +S +N  +I   L E+ V + +G    ++D P   P P    
Sbjct: 487 VHFAVYGDDNLVSVSDKYSSLYNLVSISSFLRERGVVLKNGQCKDEEDFPPFSPSPS-TC 545

Query: 336 DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 443
           DFLKR+F+   +G + APLD +++    +W+  S+D
Sbjct: 546 DFLKRRFVLGSSGRVLAPLDKSSLLGCAHWVRKSQD 581

[71][TOP]
>UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO
          Length = 1870

 Score =  102 bits (253), Expect = 3e-20
 Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176
            RYA   + +++V  G+PSGF LTV+ NS+ NEIL++YAY       P  +  F   V + 
Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIGNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSME 1554

Query: 177  VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356
             YGDDNLISV+ + +S F+G  +   +    +K+TDG DK    IE +     DFLKR F
Sbjct: 1555 EYGDDNLISVSDAISSKFDGSFLVSFIEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 1614

Query: 357  LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536
                 G  ++P+   +++  L+++   K               +++ E  + N N  L E
Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659

Query: 537  LYLHN--DSKEFQ 569
            L+LH+  ++KEF+
Sbjct: 1660 LWLHDVKEAKEFR 1672

[72][TOP]
>UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO
          Length = 2158

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 19/196 (9%)
 Frame = +3

Query: 6    YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161
            Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K     
Sbjct: 1429 YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 1488

Query: 162  TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335
             + + VYGDDNL++V P    W+   AI   L    V I +G DK  D  + +     EL
Sbjct: 1489 KLFVAVYGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSEL 1547

Query: 336  DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488
             FL R F +   G +QAPL   +I   +YW+ PS          +   T  + + + G  
Sbjct: 1548 TFLSRGFKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP- 1606

Query: 489  DVIEELVLNVNVALME 536
             V E+LV +V  AL E
Sbjct: 1607 QVFEKLVTDVQNALKE 1622

[73][TOP]
>UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus
           RepID=UPI000043F357
          Length = 707

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQT 164
           RY      ++ V  G+PSGF LTV+VNS+ N   I ++Y KL  + E         F+Q 
Sbjct: 332 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQM 391

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
           V    YGDDNL+SV       FN   I   LAE  V + +G+DK+   + P  P  ++DF
Sbjct: 392 VAYATYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDF 451

Query: 342 LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428
           LKRKF+    G + APL+   I   L+W+
Sbjct: 452 LKRKFVHYQ-GHVVAPLNPVNITERLHWI 479

[74][TOP]
>UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV
          Length = 2250

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQT 164
            RY      ++ V  G+PSGF LTV+VNS+ N   I ++Y KL  + E         F+Q 
Sbjct: 1875 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQM 1934

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
            V    YGDDNL+SV       FN   I   LAE  V + +G+DK+   + P  P  ++DF
Sbjct: 1935 VAYATYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDF 1994

Query: 342  LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428
            LKRKF+    G + APL+   I   L+W+
Sbjct: 1995 LKRKFVHYQ-GHVVAPLNPVNITERLHWI 2022

[75][TOP]
>UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV
          Length = 2235

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQT 164
            RY      ++ V  G+PSGF LTV+VNS+ N   I ++Y KL  + E         F+Q 
Sbjct: 1860 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQM 1919

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
            V    YGDDNL+SV       FN   I   LAE  V + +G+DK+   + P  P  ++DF
Sbjct: 1920 VAYATYGDDNLVSVNDVITERFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDF 1979

Query: 342  LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428
            LKRKF+    G + APL+   I   L+W+
Sbjct: 1980 LKRKFVHYQ-GHVVAPLNPVNITERLHWI 2007

[76][TOP]
>UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO
          Length = 2158

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 19/196 (9%)
 Frame = +3

Query: 6    YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161
            Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K     
Sbjct: 1429 YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 1488

Query: 162  TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335
             + + VYGDDNL++V P    W+   AI   L    V I +G DK  D  + +     EL
Sbjct: 1489 KLFVAVYGDDNLVAV-PMELHWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSEL 1547

Query: 336  DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488
             FL R F +   G +QAPL   +I   +YW+ PS          +   T  + + + G  
Sbjct: 1548 TFLSRGFKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP- 1606

Query: 489  DVIEELVLNVNVALME 536
             V E+LV +V  AL E
Sbjct: 1607 QVFEKLVTDVQNALKE 1622

[77][TOP]
>UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus
           RepID=UPI0000164A53
          Length = 709

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQT 164
           RY      ++ V  G+PSGF LTV+VNS+ N   + +AY KL + +  K       F+  
Sbjct: 332 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTL 391

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
           V   VYGDDNLISV  +    FN   I   L E  V + +G+DK+   + P  P  ++DF
Sbjct: 392 VSYAVYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDF 451

Query: 342 LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428
           LKR+F  L  G I APL+   I   L+W+
Sbjct: 452 LKRRFTTLQ-GHIVAPLNTVNITERLHWV 479

[78][TOP]
>UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus
            RepID=Q9JGP2_9SECO
          Length = 2079

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 7/149 (4%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQT 164
            RY      ++ V  G+PSGF LTV+VNS+ N   + +AY KL + +  K       F+  
Sbjct: 1702 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTL 1761

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
            V   VYGDDNLISV  +    FN   I   L E  V + +G+DK+   + P  P  ++DF
Sbjct: 1762 VSYAVYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDF 1821

Query: 342  LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428
            LKR+F  L  G I APL+   I   L+W+
Sbjct: 1822 LKRRFTTLQ-GHIVAPLNTVNITERLHWV 1849

[79][TOP]
>UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU
          Length = 2155

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 19/196 (9%)
 Frame = +3

Query: 6    YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161
            Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K     
Sbjct: 1432 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPHDFN 1491

Query: 162  TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335
             + + VYGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   EL
Sbjct: 1492 QLFVAVYGDDNLVAV-PLHLQWYSLPNIAQELDMVNVVIKNGLDKSMDVNEVQFQDLSEL 1550

Query: 336  DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488
             FL R F +   G   APL   +I   +YW+ P+          +   T  + + + G+V
Sbjct: 1551 TFLSRGFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDAQAMMENVETGIREAFHHGQV 1610

Query: 489  DVIEELVLNVNVALME 536
               E+LV +V  AL E
Sbjct: 1611 -AYEKLVADVQEALNE 1625

[80][TOP]
>UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO
          Length = 2151

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 66/197 (33%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
 Frame = +3

Query: 6    YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQ 158
            Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         +   F 
Sbjct: 1430 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFN 1489

Query: 159  QTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWE 332
            Q + + VYGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   E
Sbjct: 1490 Q-LFIAVYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSE 1547

Query: 333  LDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGE 485
            L FL R F +   G   APL   +I   +YW+ P+          +   T  + + + G 
Sbjct: 1548 LTFLSRGFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGR 1607

Query: 486  VDVIEELVLNVNVALME 536
            V   ++LVL+V  AL E
Sbjct: 1608 V-AYDKLVLDVQTALDE 1623

[81][TOP]
>UniRef100_Q769F2 RNA dependent RNA polymerase (Fragment) n=1 Tax=Satsuma dwarf virus
           RepID=Q769F2_SDV
          Length = 374

 Score = 87.0 bits (214), Expect = 9e-16
 Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164
           RY      +++++ G PSGFA TV++NSV NE  +++++  +      A +   C F + 
Sbjct: 22  RYLISDGVLYEIHGGTPSGFAPTVMLNSVVNEFYLKWSWMGIMREAGYAKEASLCAFHEA 81

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
             + VYGDDN +SVA   AS +N + I   L+   VK+ DG+   + TI+P  P  E+DF
Sbjct: 82  TEISVYGDDNFVSVATPVASLYNLKTISEFLSRVGVKLGDGA--KSGTIKPFIPLEEVDF 139

Query: 342 LKRKFL-KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 518
           LKRKF+    +  I  PL+  +I   L+++                 G  D I  L LN+
Sbjct: 140 LKRKFVADSKSTAILCPLNKRSIEERLFYV----------------RGGQDEIAALELNI 183

Query: 519 NVALMELYLH 548
             AL E + H
Sbjct: 184 ATALCEAFFH 193

[82][TOP]
>UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus
            RepID=A0N0G3_9VIRU
          Length = 1943

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 20/197 (10%)
 Frame = +3

Query: 6    YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQ 158
            Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         +   F 
Sbjct: 1222 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFN 1281

Query: 159  QTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWE 332
            Q + + VYGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   E
Sbjct: 1282 Q-LFIAVYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSE 1339

Query: 333  LDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGE 485
            L FL R F +   G   APL   +I   +YW+ P+          +   T  + + + G 
Sbjct: 1340 LTFLSRGFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGR 1399

Query: 486  VDVIEELVLNVNVALME 536
            V   ++LV +V  AL E
Sbjct: 1400 V-AYDKLVSDVQTALDE 1415

[83][TOP]
>UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus
           RepID=Q20LA1_9SECO
          Length = 533

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 38/71 (53%), Positives = 51/71 (71%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           R +  G +V++V  G+PSGFALTV  NS+FNEIL+R AYR L P+ E+  F   V LIVY
Sbjct: 461 RISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVALIVY 520

Query: 183 GDDNLISVAPS 215
           GDDN++ + P+
Sbjct: 521 GDDNVMGIHPN 531

[84][TOP]
>UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus
           RepID=UPI0000164A61
          Length = 694

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVC 170
           R   V + +++V  G PSGFALTV++NSV N+  + +A+RK+     P     R  ++ C
Sbjct: 327 RRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHC 386

Query: 171 LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
              VYGDDN++S +      +N   I   L    V ++DG  K    ++   F ELDFLK
Sbjct: 387 TFSVYGDDNVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLK 445

Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHT 455
           R+++         PL  +AI   L+W+  S+D   T
Sbjct: 446 RRWVLYSGQGFLCPLHKSAIEERLFWVRSSEDSVET 481

[85][TOP]
>UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO
          Length = 1915

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVC 170
            R   V + +++V  G PSGFALTV++NSV N+  + +A+RK+     P     R  ++ C
Sbjct: 1548 RRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHC 1607

Query: 171  LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
               VYGDDN++S +      +N   I   L    V ++DG  K    ++   F ELDFLK
Sbjct: 1608 TFSVYGDDNVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLK 1666

Query: 348  RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHT 455
            R+++         PL  +AI   L+W+  S+D   T
Sbjct: 1667 RRWVLYSGQGFLCPLHKSAIEERLFWVRSSEDSVET 1702

[86][TOP]
>UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO
          Length = 2163

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVC 170
            R   V  +++ V  G PSGFALTV++NS+ N+  + +A+RK    ++P     R  +T C
Sbjct: 1609 RRILVLAELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMSRISPSMVTYRVMRTHC 1668

Query: 171  LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347
               VYGDDN++S + +    +N   I   L    V ++DG  K    I+   F +LDFLK
Sbjct: 1669 TFSVYGDDNVVSFSLAVRDMYNLCTIADELKTIGVTLSDGK-KTGVLIKWTGFKDLDFLK 1727

Query: 348  RKFLKLDTG-VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNV 524
            R++ +L+ G   + PLD  AI   L+W+  S+D                 +E L  N   
Sbjct: 1728 RRW-ELEPGHGFKCPLDKMAIEERLFWVRKSEDN----------------MESLDDNCYS 1770

Query: 525  ALMELYLH 548
            ALME + H
Sbjct: 1771 ALMEAFHH 1778

[87][TOP]
>UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling virus
            RepID=Q9YZ97_SDV
          Length = 872

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164
            RY      V++++ G PSGFA TV++NS+ NE  +++++  L      A +     F + 
Sbjct: 519  RYLISDGYVYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGLMKEAGYAKEASLYAFHEA 578

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFL 344
              + +YGDDN +SVA   AS +N + I   L    VK+ DG+ K   T    P  E+DFL
Sbjct: 579  TEISLYGDDNFVSVATPVASLYNLKTISEFLRRIGVKLGDGA-KTGITKPFIPLEEVDFL 637

Query: 345  KRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNV 524
            KR+F+        A    TAI      L P K K    ++     G  D +  L LN+  
Sbjct: 638  KRQFV--------ADAGSTAI------LCPLK-KISIEERLFYVKGGQDELAALELNMAT 682

Query: 525  ALMELYLHNDSKEFQR 572
            AL E + H   KE+ R
Sbjct: 683  ALCEAFFH--GKEYFR 696

[88][TOP]
>UniRef100_B4ZF30 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cycas necrotic
           stunt virus RepID=B4ZF30_CNSV
          Length = 73

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 39/73 (53%), Positives = 50/73 (68%)
 Frame = +3

Query: 78  VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 257
           +NSV NEIL+RY ++ L   P++  F   V L+VYGDDNL+S     A +FNGE I+ TL
Sbjct: 1   INSVLNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 60

Query: 258 AEKKVKITDGSDK 296
            +K V ITDGSDK
Sbjct: 61  KKKNVTITDGSDK 73

[89][TOP]
>UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus
           RepID=UPI00004FF342
          Length = 675

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
           R    G  +++V+ G+P GFALTV+VNS+ N  L+R+++  +        F   V L V 
Sbjct: 322 RLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVV 380

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFL 359
           GDDNL+SV    A  FN + +   LA     + DGSDK+   + E  P  + DFLKR F 
Sbjct: 381 GDDNLVSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF- 439

Query: 360 KLDTGVIQAPLDMTAIFSSLYWL 428
           K       APL   ++  SL+W+
Sbjct: 440 KARGDRYLAPLSWLSLSESLHWV 462

[90][TOP]
>UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus
            RepID=Q5G2U4_9SECO
          Length = 2227

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182
            R    G  +++V+ G+P GFALTV+VNS+ N  L+R+++  +        F   V L V 
Sbjct: 1874 RLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVV 1932

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFL 359
            GDDNL+SV    A  FN + +   LA     + DGSDK+   + E  P  + DFLKR F 
Sbjct: 1933 GDDNLVSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF- 1991

Query: 360  KLDTGVIQAPLDMTAIFSSLYWL 428
            K       APL   ++  SL+W+
Sbjct: 1992 KARGDRYLAPLSWLSLSESLHWV 2014

[91][TOP]
>UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus
           RepID=UPI0000164A59
          Length = 682

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164
           RY      +++++ G PSGFA TV++NSV NE  +++++  L      A +     F + 
Sbjct: 330 RYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEA 389

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
             + +YGDDN +SVA   AS +N   I   L    VK+ DG+     TI+P  P  E+DF
Sbjct: 390 TEISLYGDDNFVSVATPVASVYNLTTISNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDF 447

Query: 342 LKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLN 515
           LKR+F+  D+G   I  PL   +I   L+++                 G  D I  L LN
Sbjct: 448 LKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELN 490

Query: 516 VNVALMELYLH 548
           +  AL E + H
Sbjct: 491 IATALCEAFFH 501

[92][TOP]
>UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV
          Length = 2081

 Score = 78.2 bits (191), Expect = 4e-13
 Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 9/191 (4%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164
            RY      +++++ G PSGFA TV++NSV NE  +++++  L      A +     F + 
Sbjct: 1729 RYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEA 1788

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341
              + +YGDDN +SVA   AS +N   I   L    VK+ DG+     TI+P  P  E+DF
Sbjct: 1789 TEISLYGDDNFVSVATPVASVYNLTTISNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDF 1846

Query: 342  LKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLN 515
            LKR+F+  D+G   I  PL   +I   L+++                 G  D I  L LN
Sbjct: 1847 LKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELN 1889

Query: 516  VNVALMELYLH 548
            +  AL E + H
Sbjct: 1890 IATALCEAFFH 1900

[93][TOP]
>UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus
            RepID=Q9IJX4_CRPV
          Length = 1771

 Score = 77.8 bits (190), Expect = 6e-13
 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
 Frame = +3

Query: 18   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVY 182
            G  V+      PSG   TV++N ++N +++R  +    RKLAP+ +  + F++ V +I Y
Sbjct: 1559 GDNVYMWTHSQPSGNPFTVIINCLYNSMIMRIVWILLARKLAPEMQSMKKFRENVSMISY 1618

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL- 359
            GDDN ++++     WFN   I   + E K + TD   K    ++     E+ FLK++F+ 
Sbjct: 1619 GDDNCLNISDRVVEWFNQITISEQMKEIKHEYTD-EGKTGDMVKFPSLSEIHFLKKRFVF 1677

Query: 360  --KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 533
              +L   V  APL    I+  L W                    +D  E L++N+N A  
Sbjct: 1678 SHQLQRTV--APLQKDVIYEMLNWT----------------RNTIDPNEILMMNINTAFR 1719

Query: 534  ELYLHNDSKEFQRVQ 578
            E+  H  S E+Q+++
Sbjct: 1720 EIVYHGKS-EYQKLR 1733

[94][TOP]
>UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B
            RepID=A7KCA2_9VIRU
          Length = 1614

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
 Frame = +3

Query: 51   PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
            PSG  LTV++NS+ N + +RY Y  L P+     F+  V L+ YGDDN++SV+  C  WF
Sbjct: 1288 PSGNPLTVILNSIVNSLRMRYVYFMLNPEHTVTTFKDNVNLMTYGDDNIMSVSREC-DWF 1346

Query: 231  NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD-TGVIQAPLDMTAI 407
            N  +I  T A   +  T  +DK++ ++      +  FLKR +   D  G   APL+  +I
Sbjct: 1347 NHTSISETFATLNIVYT-MADKESASVPFINIKDASFLKRTWRMDDQLGCYVAPLEEESI 1405

Query: 408  FSSLYWLTPSK 440
              SL   T SK
Sbjct: 1406 EKSLMVWTRSK 1416

[95][TOP]
>UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU
          Length = 297

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[96][TOP]
>UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU
          Length = 297

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[97][TOP]
>UniRef100_UPI0000163DC1 RNA-dependent RNA polymerase n=1 Tax=Maize chlorotic dwarf virus
           RepID=UPI0000163DC1
          Length = 612

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQT 164
           R   V + +F+   G+PSGFA+TV+ NS  N   +  A+        L+P+     F   
Sbjct: 342 REGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNY 401

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWEL--- 335
             ++VYGDDN++SV  +   ++N   +   L++  V  TD  D   P  +  PF E+   
Sbjct: 402 CKVVVYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSV 459

Query: 336 DFLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506
            FLKR+++ L    + + +APLD T+I   L+W+    +                 IE L
Sbjct: 460 SFLKRRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEAL 503

Query: 507 VLNVNVALMELYLH 548
             N+  AL E  +H
Sbjct: 504 NQNIESALYEASIH 517

[98][TOP]
>UniRef100_O11979 Polyprotein n=2 Tax=Maize chlorotic dwarf virus RepID=O11979_9SECO
          Length = 3443

 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQT 164
            R   V + +F+   G+PSGFA+TV+ NS  N   +  A+        L+P+     F   
Sbjct: 3173 REGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNY 3232

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWEL--- 335
              ++VYGDDN++SV  +   ++N   +   L++  V  TD  D   P  +  PF E+   
Sbjct: 3233 CKVVVYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSV 3290

Query: 336  DFLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506
             FLKR+++ L    + + +APLD T+I   L+W+    +                 IE L
Sbjct: 3291 SFLKRRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEAL 3334

Query: 507  VLNVNVALMELYLH 548
              N+  AL E  +H
Sbjct: 3335 NQNIESALYEASIH 3348

[99][TOP]
>UniRef100_Q8B3M2 Polyprotein n=1 Tax=Deformed wing virus RepID=Q8B3M2_9VIRU
          Length = 2893

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
            + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 384  APLDMTAIFSSLYW 425
            A LD  ++  +  W
Sbjct: 2815 ANLDKVSVEGTTNW 2828

[100][TOP]
>UniRef100_Q7TG18 Polyprotein n=1 Tax=Deformed wing virus RepID=Q7TG18_9VIRU
          Length = 2893

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
            + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 384  APLDMTAIFSSLYW 425
            A LD  ++  +  W
Sbjct: 2815 ANLDKVSVEGTTNW 2828

[101][TOP]
>UniRef100_Q6XMI0 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=Q6XMI0_9VIRU
          Length = 1566

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 1382 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 1440

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
            + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 1441 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 1499

Query: 384  APLDMTAIFSSLYW 425
            A LD  ++  +  W
Sbjct: 1500 ANLDKVSVEGTTNW 1513

[102][TOP]
>UniRef100_Q0EDK8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK8_9VIRU
          Length = 297

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[103][TOP]
>UniRef100_Q0EDI6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI6_9VIRU
          Length = 297

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[104][TOP]
>UniRef100_A5A4Z3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cowpea mosaic virus
           RepID=A5A4Z3_CPMV
          Length = 203

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           R A     V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL     AP+     F + +
Sbjct: 133 RLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLM 192

Query: 168 CLIVYGDDNLI 200
            L+ YGDDNL+
Sbjct: 193 GLVTYGDDNLV 203

[105][TOP]
>UniRef100_A0ZSE7 Polyprotein (Fragment) n=13 Tax=Kakugo virus RepID=A0ZSE7_9VIRU
          Length = 297

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[106][TOP]
>UniRef100_UPI0000163D77 RNA-dependent RNA polymerase n=1 Tax=Rice tungro spherical virus
           RepID=UPI0000163D77
          Length = 621

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167
           R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T 
Sbjct: 353 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 412

Query: 168 CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335
           C IV YGDDN++SV       +N + +   L+   V  TDG DK+ P    KP+    ++
Sbjct: 413 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 470

Query: 336 DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488
            FLKR F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   
Sbjct: 471 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 529

Query: 489 DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578
           D  ++LV  +N AL  + L      F+  Q
Sbjct: 530 DYFDDLVRRLNSALTRVMLPPTDISFEECQ 559

[107][TOP]
>UniRef100_Q98645 ORF1 protein (Fragment) n=1 Tax=Rice tungro spherical virus
            RepID=Q98645_9SECO
          Length = 1619

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167
            R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T 
Sbjct: 1350 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 1409

Query: 168  CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335
            C IV YGDDN++SV       +N + +   L+   V  TDG DK+ P    KP+    ++
Sbjct: 1410 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 1467

Query: 336  DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488
             FLKR F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   
Sbjct: 1468 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 1526

Query: 489  DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578
            D  ++LV  +N AL  + L      F+  Q
Sbjct: 1527 DYFDDLVQRLNSALKRVMLPPTDISFEECQ 1556

[108][TOP]
>UniRef100_Q0EDK3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK3_9VIRU
          Length = 297

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKISVEGTTNW 275

[109][TOP]
>UniRef100_Q0EDI5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI5_9VIRU
          Length = 297

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGVTDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[110][TOP]
>UniRef100_A5A4Z4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Bean pod mottle
           virus RepID=A5A4Z4_9SECO
          Length = 197

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           R A   + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL     AP      F+  V
Sbjct: 127 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFV 186

Query: 168 CLIVYGDDNLI 200
            L VYGDDNL+
Sbjct: 187 SLCVYGDDNLV 197

[111][TOP]
>UniRef100_Q91PP5 Probable RNA-directed RNA polymerase n=1 Tax=Rice tungro spherical
            virus (isolate Vt6) RepID=POLG_RTSVT
          Length = 3471

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167
            R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T 
Sbjct: 3202 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3261

Query: 168  CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335
            C IV YGDDN++SV       +N + +   L+   V  TDG DK+ P    KP+    ++
Sbjct: 3262 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3319

Query: 336  DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488
             FLKR F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   
Sbjct: 3320 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3378

Query: 489  DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578
            D  ++LV  +N AL  + L      F+  Q
Sbjct: 3379 DYFDDLVQRLNSALKRVMLPPTDISFEECQ 3408

[112][TOP]
>UniRef100_Q83034 Probable RNA-directed RNA polymerase n=2 Tax=Rice tungro spherical
            virus RepID=POLG_RTSVA
          Length = 3473

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167
            R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T 
Sbjct: 3205 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3264

Query: 168  CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335
            C IV YGDDN++SV       +N + +   L+   V  TDG DK+ P    KP+    ++
Sbjct: 3265 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3322

Query: 336  DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488
             FLKR F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   
Sbjct: 3323 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3381

Query: 489  DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578
            D  ++LV  +N AL  + L      F+  Q
Sbjct: 3382 DYFDDLVRRLNSALTRVMLPPTDISFEECQ 3411

[113][TOP]
>UniRef100_Q1MNG5 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG5_9SECO
          Length = 3471

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167
            R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T 
Sbjct: 3202 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3261

Query: 168  CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335
            C IV YGDDN++SV       +N + +   L+   V  TDG DK+ P    KP+    ++
Sbjct: 3262 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3319

Query: 336  DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488
             FLKR F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   
Sbjct: 3320 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3378

Query: 489  DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578
            D  ++LV  +N AL  + L      F+  Q
Sbjct: 3379 DYFDDLVQRLNSALKRVMLPPTDITFEECQ 3408

[114][TOP]
>UniRef100_Q1MNG4 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG4_9SECO
          Length = 3471

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167
            R    G  + + + G+PSGFA+TV+ NS  N   +  A+       L      C+   T 
Sbjct: 3202 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3261

Query: 168  CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335
            C IV YGDDN++SV       +N + +   L+   V  TDG DK+ P    KP+    ++
Sbjct: 3262 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3319

Query: 336  DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488
             FLKR F ++++   + +APLD T+I   L W+    TP  +    + +++ +   +   
Sbjct: 3320 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3378

Query: 489  DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578
            D  ++LV  +N AL  + L      F+  Q
Sbjct: 3379 DYFDDLVQRLNSALRRVMLPPTDITFEECQ 3408

[115][TOP]
>UniRef100_Q0EDJ0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ0_9VIRU
          Length = 297

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T + N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDIXNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[116][TOP]
>UniRef100_Q5MH31 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q5MH31_9SECO
          Length = 3481

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 13/195 (6%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164
            R   V + +F+   G+PSGFA+TV+ NS  N   +  A+  L      +P+     F + 
Sbjct: 3211 REGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISSSPLSPQSTLRDFDEY 3270

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGS----DKDAPTIEPKPFWE 332
              ++VYGDDN++SV+     ++N   +   L++  V  TD +    +K  P ++ +    
Sbjct: 3271 CKVVVYGDDNIVSVSEEFIPYYNLRMVAAYLSQFGVTYTDDAKNPIEKSVPWVDIR---T 3327

Query: 333  LDFLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEE 503
            + FLKR++  +    + + +APL+ T+I   L+W+    D                 IE 
Sbjct: 3328 VSFLKRRWTSIGGQLSTIYKAPLETTSIEERLHWIRECDDD----------------IEA 3371

Query: 504  LVLNVNVALMELYLH 548
            L  N+  AL E  +H
Sbjct: 3372 LNQNIESALYEASIH 3386

[117][TOP]
>UniRef100_Q0EDK9 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK9_9VIRU
          Length = 297

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+      P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGXTDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[118][TOP]
>UniRef100_Q0EDJ8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ8_9VIRU
          Length = 297

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K+  TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMGFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[119][TOP]
>UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU
          Length = 3085

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
            VFKVN G+ +G  +T VVNSV N IL+ Y + K+A +     F +   +IV GDD +IS+
Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIA-RRRASEFFKLTYIIVMGDDVVISL 2815

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT-- 371
                   F+   I    A+  +K+TD S+K+  T EPKP   F + +FL R F   D   
Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873

Query: 372  GVIQAPLDMTAIFSSLYWLTPSKDK 446
             +  AP+   A+F    W++  +D+
Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898

[120][TOP]
>UniRef100_B3F388 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F388_9VIRU
          Length = 139

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 35/77 (45%), Positives = 49/77 (63%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N + +RYAY  L PK E   F++ V L+ YGDDN++SV+P+ A W+
Sbjct: 59  PSGHPLTVIINSLVNSLYMRYAYCLLNPKHEVSSFKENVSLMTYGDDNIMSVSPT-APWY 117

Query: 231 NGEAIRVTLAEKKVKIT 281
           N  AI    A   +  T
Sbjct: 118 NHTAIAAAFATMDITYT 134

[121][TOP]
>UniRef100_A0ZSF0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF0_9VIRU
          Length = 297

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  +  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPLFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[122][TOP]
>UniRef100_UPI0000167D17 RNA-dependent RNA polymerase n=1 Tax=Parsnip yellow fleck virus
           RepID=UPI0000167D17
          Length = 813

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQT 164
           R++ +   + +V  G PSGF +TV+ NS  N   ++ A+  LA           C F + 
Sbjct: 350 RFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKY 409

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPF---WE 332
           V   VYGDDN++++      W+N + +   L +   V +TDG+   A   E KP+    E
Sbjct: 410 VRACVYGDDNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILE 467

Query: 333 LDFLKRKFL--KLDTGVIQAPLDMTAIFSSLYWL 428
            DFLKR F   +L   +  APL   +I   +YW+
Sbjct: 468 FDFLKRHFKADELIPSLFHAPLHKRSIEEQVYWI 501

[123][TOP]
>UniRef100_A0ZSF1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF1_9VIRU
          Length = 297

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T     
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPXFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[124][TOP]
>UniRef100_Q05057 Probable RNA-directed RNA polymerase n=1 Tax=Parsnip yellow fleck
            virus (isolate P-121) RepID=POLG_PYFV1
          Length = 3027

 Score = 70.9 bits (172), Expect = 7e-11
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQT 164
            R++ +   + +V  G PSGF +TV+ NS  N   ++ A+  LA           C F + 
Sbjct: 2564 RFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKY 2623

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPF---WE 332
            V   VYGDDN++++      W+N + +   L +   V +TDG+   A   E KP+    E
Sbjct: 2624 VRACVYGDDNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILE 2681

Query: 333  LDFLKRKFL--KLDTGVIQAPLDMTAIFSSLYWL 428
             DFLKR F   +L   +  APL   +I   +YW+
Sbjct: 2682 FDFLKRHFKADELIPSLFHAPLHKRSIEEQVYWI 2715

[125][TOP]
>UniRef100_Q6QLR4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Venturia canescens
           picorna-like virus RepID=Q6QLR4_9PICO
          Length = 514

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK-----PEKCRFQQTVCLIVYGDD 191
           VF+  CGLPSG   TV  NS  N + IR A+ +LA +      +   F + V L+  GDD
Sbjct: 328 VFRPTCGLPSGNCETVERNSQTNSLYIRIAFYELAKRYAPVYRDAYWFDKKVRLVTNGDD 387

Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITD----GSDKDAPTIEPKPFWELDFLKRKFL 359
            + SV     SWFN   +     E  +K+TD    G  +D  +IE     E  +LKR F+
Sbjct: 388 LIASVKEDVISWFNNRTLIEFFVEYGLKMTDALKSGVVRDYCSIE-----EASYLKRGFV 442

Query: 360 KLDT--GVIQAPLDMTAIFSSLYWLTPSKDK 446
           K  T  G   APL+  +I  +  W+  S DK
Sbjct: 443 KHPTREGEWMAPLEEASITDTANWVWRSVDK 473

[126][TOP]
>UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia
            vitripennis virus RepID=C1K2M4_9VIRU
          Length = 787

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAP-KPEKCRFQQTVCLIVYGDD 191
            + + N G+PSG A TV+ NS  N I IR AY    RK AP   +   F+Q V +   GDD
Sbjct: 578  IVRFNTGMPSGNAGTVITNSECNSIYIRCAYLGLARKYAPVLADLYWFKQYVRMFSNGDD 637

Query: 192  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371
             +++V P   SWFN   +    ++  +K+TD   K     E     E  +LKR F K  T
Sbjct: 638  LIMAVKPDIISWFNNRTLIDFFSQHNIKMTDAL-KSGKVREFCSLEEATYLKRGFKKHPT 696

Query: 372  --GVIQAPLDMTAIFSSLYWLTPSKDK 446
              G   APL+  +I  +  W+  S D+
Sbjct: 697  RPGEWLAPLERASITDTANWIWRSVDR 723

[127][TOP]
>UniRef100_Q7TFA5 Polyprotein n=1 Tax=Varroa destructor virus 1 RepID=Q7TFA5_9VIRU
          Length = 2893

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
            V++V CG+PSG  +T ++N++ N +LIR A++ +   P    F + V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWQGITDLP-LSEFSRHVVLVCYGDDLIMNV 2755

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
            +      FN   I    +  K++ TD  DK   T+  +      FLK  FLK  T  V  
Sbjct: 2756 SDEMIDKFNAVTIGDFFSRYKMEFTD-QDKSGNTVRWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 384  APLDMTAIFSSLYW 425
            A LD  +I  +  W
Sbjct: 2815 ANLDKVSIEGTTNW 2828

[128][TOP]
>UniRef100_Q76LW4 Polyprotein n=1 Tax=Kakugo virus RepID=Q76LW4_9VIRU
          Length = 2893

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
            V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
            + +    FN   I    ++ ++  TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYEMVFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814

Query: 384  APLDMTAIFSSLYW 425
            A LD  ++  +  W
Sbjct: 2815 ANLDKVSVEGTTNW 2828

[129][TOP]
>UniRef100_Q0EDJ6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ6_9VIRU
          Length = 297

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD  ++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  D    T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNXIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[130][TOP]
>UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU
          Length = 3085

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
            VFKVN G+ +G  +T VVNSV N IL+ Y + K+  +     F +   +IV GDD +IS+
Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 2815

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT-- 371
                   F+   I    A+  +K+TD S+K+  T EPKP   F + +FL R F   D   
Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873

Query: 372  GVIQAPLDMTAIFSSLYWLTPSKDK 446
             +  AP+   A+F    W++  +D+
Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898

[131][TOP]
>UniRef100_B6UIR8 Polyprotein n=1 Tax=Carrot necrotic dieback virus RepID=B6UIR8_9SECO
          Length = 3015

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQT 164
            R++ V   V +++ G PSGF +TV+ NS  N   ++ A+  LA +  +        F   
Sbjct: 2555 RFSLVKGGVLRISGGGPSGFPMTVIFNSFINLFYLQSAWIMLASQNGRSDISCPSNFPSF 2614

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEP-KPFWELD 338
            V   VYGDDN++++      W+N + +   L +   V +TDG+   A   +P     + D
Sbjct: 2615 VRACVYGDDNIVAIKNEVLPWYNLQTVSKILKDYFGVTMTDGAKNCAENAQPYGKILDFD 2674

Query: 339  FLKRKFL--KLDTGVIQAPLDMTAIFSSLYWLTPSKD 443
            FLKR F   +L   +  APL   +I   +YW+    D
Sbjct: 2675 FLKRNFRPDELIPSLFHAPLHKRSIEEQVYWIREGGD 2711

[132][TOP]
>UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious
           flacherie virus RepID=A3RKR2_9VIRU
          Length = 639

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           VFKVN G+ +G  +T VVNSV N IL+ Y + K+  +     F +   +IV GDD +IS+
Sbjct: 311 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 369

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT-- 371
                  F+   I    A+  +K+TD S+K+  T EPKP   F + +FL R F   D   
Sbjct: 370 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 427

Query: 372 GVIQAPLDMTAIFSSLYWLTPSKDK 446
            +  AP+   A+F    W++  +D+
Sbjct: 428 DITFAPVKTIALFDCPLWISKGQDE 452

[133][TOP]
>UniRef100_Q1LZW4 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q1LZW4_9VIRU
          Length = 2107

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
 Frame = +3

Query: 24   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 192  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371
            +L SV+   + WFN  AI   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHAITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008

Query: 372  GVIQAPLDMTAIFSSLYW 425
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[134][TOP]
>UniRef100_Q0EDK4 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK4_9VIRU
          Length = 297

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A L   ++  +  W
Sbjct: 262 ANLXKVSVEGTTNW 275

[135][TOP]
>UniRef100_Q09X76 Nonstructural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q09X76_9VIRU
          Length = 2107

 Score = 69.3 bits (168), Expect = 2e-10
 Identities = 55/182 (30%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
 Frame = +3

Query: 24   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVARIFYGDD 1949

Query: 192  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDQ 2008

Query: 372  GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 551
              I APL    I     W   +                +D  + L+    +A  E  LH 
Sbjct: 2009 FWI-APLSQNTIEDMCMWSRKN----------------IDAQDALLQTTRIASFEASLHE 2051

Query: 552  DS 557
             S
Sbjct: 2052 KS 2053

[136][TOP]
>UniRef100_Q7LZW0 Polyprotein n=1 Tax=Parsnip yellow fleck virus RepID=Q7LZW0_9SECO
          Length = 637

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 188
           + +V  G PSGF +TV+ NS  N   ++ A+  LA           C F + V   VYGD
Sbjct: 491 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 550

Query: 189 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPF---WELDFLKRKF 356
           DN++++      W+N + +   L +   V +TDG+   A   E KP+    E DFLKR F
Sbjct: 551 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 608

Query: 357 L--KLDTGVIQAPLDMTAIFSSLYWL 428
              +L   +  APL   +I   +YW+
Sbjct: 609 KADELIPSLFHAPLHKRSIEEQVYWI 634

[137][TOP]
>UniRef100_Q0EDJ5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ5_9VIRU
          Length = 297

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD  ++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  D    T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNXIDKFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[138][TOP]
>UniRef100_A6NA62 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato torrado
           virus RepID=A6NA62_9SECO
          Length = 216

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
 Frame = +3

Query: 6   YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161
           Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K     
Sbjct: 90  YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 149

Query: 162 TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335
            + + VYGDDNL++V P    W+   AI   L    V I +G DK  D  + +     EL
Sbjct: 150 KLFVAVYGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSEL 208

Query: 336 DFLKRKF 356
            FL R F
Sbjct: 209 TFLSRGF 215

[139][TOP]
>UniRef100_A1X599 Polyprotein (Fragment) n=1 Tax=Deformed wing virus
           RepID=A1X599_9VIRU
          Length = 205

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 40/115 (34%), Positives = 64/115 (55%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P    F Q V L+ YGDD +++V
Sbjct: 90  VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 148

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T
Sbjct: 149 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 202

[140][TOP]
>UniRef100_Q91NQ2 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q91NQ2_9VIRU
          Length = 2107

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
 Frame = +3

Query: 24   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 192  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDH 2008

Query: 372  GVIQAPLDMTAIFSSLYW 425
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[141][TOP]
>UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU
          Length = 1759

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 8/184 (4%)
 Frame = +3

Query: 51   PSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPS 215
            PSG   TV++N ++N I++R ++     K  P+ +  + F + V LI YGDDN++++   
Sbjct: 1558 PSGNPFTVIINCLYNSIIMRLSWIRVMEKFQPRLKSMKWFNEYVALITYGDDNVLNIDAK 1617

Query: 216  CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL---KLDTGVIQA 386
               WFN   I   + E + + TD + K    ++ +   ++ FLKRKF    +L   V  A
Sbjct: 1618 VVEWFNQINISEVMTEMRHEYTDEA-KTGDIVKSRKLEDIFFLKRKFRFSPELQRHV--A 1674

Query: 387  PLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEF 566
            PL +  I+  L W   S                +D  E L+ N+  A  E+  H   +E+
Sbjct: 1675 PLKIEVIYEMLNWSRRS----------------IDPDEILMSNIETAFREVVYHG-KEEY 1717

Query: 567  QRVQ 578
             +++
Sbjct: 1718 DKLR 1721

[142][TOP]
>UniRef100_Q5DM98 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q5DM98_9VIRU
          Length = 2107

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
 Frame = +3

Query: 24   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 192  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008

Query: 372  GVIQAPLDMTAIFSSLYW 425
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[143][TOP]
>UniRef100_Q4JFT3 Non-structural polyprotein n=1 Tax=Taura syndrome virus
            RepID=Q4JFT3_9VIRU
          Length = 2107

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
 Frame = +3

Query: 24   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191
            KVF++N   PSG  LT ++N V+N I+ RY Y    R+         F   V  I YGDD
Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949

Query: 192  NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371
            +L SV+   + WFN   I   +A    + TD +   +P    +   E+ FLKR+F+  D 
Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008

Query: 372  GVIQAPLDMTAIFSSLYW 425
              I APL    I     W
Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025

[144][TOP]
>UniRef100_B3F389 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F389_9VIRU
          Length = 139

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 34/77 (44%), Positives = 46/77 (59%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N + IRY YR L PK E   F+Q V L+ YGDDN++ ++    SWF
Sbjct: 59  PSGHPLTVIINSLVNSLYIRYCYRMLNPKKEVITFKQNVNLMTYGDDNIMGISDK-ISWF 117

Query: 231 NGEAIRVTLAEKKVKIT 281
           N  +I   L    +  T
Sbjct: 118 NHTSIADCLGMANIVYT 134

[145][TOP]
>UniRef100_Q0EDJ2 Polyprotein (Fragment) n=2 Tax=Kakugo virus RepID=Q0EDJ2_9VIRU
          Length = 297

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V +V CG+PSG   T ++N++ N +LIR A+  +   P    F Q V L+ YGDD  ++V
Sbjct: 144 VXRVPCGIPSGSPXTDILNTISNCLLIRLAWLGITDXP-LSEFSQNVVLVCYGDDLXMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  D    T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A LD  ++  +  W
Sbjct: 262 ANLDKVSVEGTTNW 275

[146][TOP]
>UniRef100_UPI0001765C94 RNA-dependent RNA polymerase n=1 Tax=Tomato marchitez virus
           RepID=UPI0001765C94
          Length = 249

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 11/126 (8%)
 Frame = +3

Query: 6   YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQ 158
           Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         +   F 
Sbjct: 126 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFN 185

Query: 159 QTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWE 332
           Q + + VYGDDNL++V P    W++   I   L    V I +G DK  D   ++ +   E
Sbjct: 186 Q-LFIAVYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSE 243

Query: 333 LDFLKR 350
           L FL R
Sbjct: 244 LTFLSR 249

[147][TOP]
>UniRef100_Q6WGS3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS3_9PICO
          Length = 151

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/95 (37%), Positives = 57/95 (60%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           + + N   PSG  LTV++NS+ N + +RYAY  L+P+ +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLSPQKDLLTFKHHVALFTYGDDNICGV 109

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311
           +  CA +F    I+  LAE  ++ T  +DK+A ++
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142

[148][TOP]
>UniRef100_A7KCA0 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-A
            RepID=A7KCA0_9VIRU
          Length = 1689

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 4/153 (2%)
 Frame = +3

Query: 36   VNCGL-PSGFALTVVVNSVFNEILIRYAYRKLAPKPE--KCRFQQTVCLIVYGDDNLISV 206
            ++CG  PSG  LTV +N + N +L+R AY  + P  E     F+    ++ YGDD   SV
Sbjct: 1486 IHCGSNPSGQNLTVYINCIVNSLLLRCAYYHMYPAAEGNPEPFRHNCAVMTYGDDVKGSV 1545

Query: 207  APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL-KLDTGVIQ 383
               C  W+N       LAE+ +  T    +  PT       + DFLKR  L   +TG+I 
Sbjct: 1546 RQEC-DWYNHITYAQFLAERDMVFTMPDKESTPTPYMNDL-DADFLKRHNLYNPETGLIH 1603

Query: 384  APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSG 482
              LD  +IF SL+ +  SK      Q A    G
Sbjct: 1604 GVLDQNSIFKSLHSVLKSKAISAEDQSAQNIDG 1636

[149][TOP]
>UniRef100_Q6WGR8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGR8_9PICO
          Length = 151

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 36/95 (37%), Positives = 56/95 (58%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           + + N   PSG  LTV++NS+ N + +RYAY  L P+ +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYALNPQKDLLTFKHRVALFTYGDDNICGV 109

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311
           +  CA +F    I+  LAE  ++ T  +DK+A ++
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142

[150][TOP]
>UniRef100_Q0EDK2 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK2_9VIRU
          Length = 297

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P      Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A L   ++  +  W
Sbjct: 262 ANLXKISVEGTTNW 275

[151][TOP]
>UniRef100_Q0EDK1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK1_9VIRU
          Length = 297

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           V++V CG+PSG  +T ++N++ N +LIR A+  +   P      Q V L+ YGDD +++V
Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383
           + +    FN   I    ++ K++ TD  DK   T++ +      FLK  FLK  T  V  
Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261

Query: 384 APLDMTAIFSSLYW 425
           A L   ++  +  W
Sbjct: 262 ANLXKXSVEGTTNW 275

[152][TOP]
>UniRef100_B3F394 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F394_9VIRU
          Length = 138

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 30/71 (42%), Positives = 47/71 (66%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++N + N + +RY Y KL+P+     F++ V ++ YGDDN++ V+ S A WF
Sbjct: 58  PSGHPLTVIINGLANSLYLRYCYAKLSPEANCVNFKRDVAVMTYGDDNIMGVSDS-APWF 116

Query: 231 NGEAIRVTLAE 263
           N   ++ TLA+
Sbjct: 117 NHTTLQSTLAD 127

[153][TOP]
>UniRef100_A5A104 Polyprotein n=1 Tax=Brevicoryne brassicae picorna-like virus
            RepID=A5A104_9VIRU
          Length = 2983

 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY---RKLAPKPEKCRFQQTVCLIVYGDDNL 197
            +++V CGLPSG   TV+ NS+ N I IR A+    + +       F+  + LI YGDD +
Sbjct: 2776 LYEVQCGLPSGNPATVIFNSIVNSIYIRCAWLDVMRNSSYKSLLDFRNNIKLITYGDDLI 2835

Query: 198  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWE-LDFLKRKFL--KLD 368
             S+  S +  FN  ++     +  +K TD + K    +EP  + E   FLK  F    + 
Sbjct: 2836 ASIDNSVSDKFNNNSLSHFFLKHNIKFTDAA-KTGVNVEPYIYLETATFLKHAFKPHPIR 2894

Query: 369  TGVIQAPLDMTAIFSSLYWLTPSKD-KFHTHQKASQ-----YSGEVDVIEELVLNVNVAL 530
             GV  A L+  +I     W+  S D K  T+    Q     Y    D     V  ++ A 
Sbjct: 2895 QGVYLAQLEELSITECANWIRKSPDPKTATYDNCVQGTMLAYGHGPDYYNRYVKKISEAW 2954

Query: 531  MELY 542
             E Y
Sbjct: 2955 FEKY 2958

[154][TOP]
>UniRef100_Q6EEL1 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q6EEL1_9SECO
          Length = 3457

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQT 164
            R   V + +F+   G+PSGFA+TV+ NS  N   +  A+        L+P+     F + 
Sbjct: 3187 RRGIVKEYLFQYCQGMPSGFAMTVIFNSFMNYYYLSLAWMNLISASPLSPQASLRYFDEY 3246

Query: 165  VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD-- 338
              +IVYGDDN+++V      ++N   +   L++  V  TD  D   P  + + + +++  
Sbjct: 3247 CKVIVYGDDNIVAVNEEFLEYYNLRLVAGYLSQFGVSYTD--DAKNPIEKSERYVKIEDV 3304

Query: 339  -FLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506
             FLKR+++ L    + + +APLD  +I   L W+    D            GE+     L
Sbjct: 3305 TFLKRRWVSLGGRASMLYKAPLDKVSIEERLNWIRECDD------------GEL----AL 3348

Query: 507  VLNVNVALMELYLH 548
            V N+  AL E  +H
Sbjct: 3349 VQNIESALYEASIH 3362

[155][TOP]
>UniRef100_Q6WGS5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=unidentified
           picorna-like virus RepID=Q6WGS5_9PICO
          Length = 151

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 36/95 (37%), Positives = 56/95 (58%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           + + N   PSG  LTV++NS+ N + +RYAY  L P+ +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNPQKDLLTFKHHVALFTYGDDNICGV 109

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311
           +  CA +F    I+  LAE  ++ T  +DK+A ++
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142

[156][TOP]
>UniRef100_B1PM64 Polyprotein (Fragment) n=1 Tax=Tomato torrado virus
           RepID=B1PM64_9SECO
          Length = 910

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 19/196 (9%)
 Frame = +3

Query: 6   YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161
           Y     KVF++  G+PSGFALTV+ NS+ NE  +RYA+  L  +P         K     
Sbjct: 181 YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 240

Query: 162 TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335
            + + VYGDDNL++V P    W+   AI   L    V I +G DK  D  + +     E 
Sbjct: 241 KLFVAVYGDDNLVAV-PMELHWYTLPAIAQELEVVNVIIKNGIDKNMDVSSSKMLDLSEP 299

Query: 336 DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488
            FL                         YW+ PS          +   T  + + + G  
Sbjct: 300 TFLXXXXXXXXXXXXXXXXXXXXXXXXXYWIRPSVGCPDALAMLENIDTGVREAFHHGP- 358

Query: 489 DVIEELVLNVNVALME 536
            V E+LV +V  AL E
Sbjct: 359 QVFEKLVADVQNALKE 374

[157][TOP]
>UniRef100_Q6A1M4 Polyprotein (Fragment) n=1 Tax=Squash mosaic virus
           RepID=Q6A1M4_9SECO
          Length = 243

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167
           RYA    +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+      P+P    F + V
Sbjct: 180 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 239

Query: 168 CLI 176
            L+
Sbjct: 240 KLV 242

[158][TOP]
>UniRef100_B3F387 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F387_9VIRU
          Length = 139

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 33/77 (42%), Positives = 47/77 (61%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N + +RY Y  L PK     F++ V L+ YGDDN++ V+P  A WF
Sbjct: 59  PSGHPLTVIINSIVNSLYMRYCYVMLNPKFTVATFKKHVRLMTYGDDNIMGVSPD-ARWF 117

Query: 231 NGEAIRVTLAEKKVKIT 281
           N  AI   L++  +  T
Sbjct: 118 NHTAIAKVLSDIDITYT 134

[159][TOP]
>UniRef100_Q6A1M5 Polyprotein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q6A1M5_TRSV
          Length = 254

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 32/59 (54%), Positives = 41/59 (69%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179
           R      +VF+V  G+PSG ALTV++NSVFNEILIRY Y+ + P PE  RF+  V L+V
Sbjct: 196 RKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVV 254

[160][TOP]
>UniRef100_B3F390 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F390_9VIRU
          Length = 139

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N + +RY YR L P  E   F++ V L+ YGDDN+++V+    SWF
Sbjct: 59  PSGHPLTVIINSLANALYMRYCYRILNPAHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117

Query: 231 NGEAIRVTLAEKKVKIT 281
           N  +I  TL E  +  T
Sbjct: 118 NHTSIANTLKEIGITYT 134

[161][TOP]
>UniRef100_Q6WGT7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGT7_9PICO
          Length = 148

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 39/96 (40%), Positives = 55/96 (57%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++ V L+ YGDDN++    S   WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114

Query: 231 NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD 338
           N  AI   LA   V+ T  +DK++ ++   PF  +D
Sbjct: 115 NHTAIVAELANIGVEYT-MADKESKSV---PFIHID 146

[162][TOP]
>UniRef100_Q6WGS2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS2_9PICO
          Length = 148

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 39/96 (40%), Positives = 55/96 (57%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++ V L+ YGDDN++    S   WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114

Query: 231 NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD 338
           N  AI   LA   V+ T  +DK++ ++   PF  +D
Sbjct: 115 NHTAIVAELANIGVEYT-MADKESKSV---PFIHID 146

[163][TOP]
>UniRef100_B3F397 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F397_9VIRU
          Length = 152

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 36/96 (37%), Positives = 57/96 (59%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N + +RYAY  L P+ E   F++ V L+ YGDDN+++V+ +   W+
Sbjct: 59  PSGHPLTVIINSLVNSLYMRYAYIILNPEQESASFRKNVALLTYGDDNILTVSRN-IDWY 117

Query: 231 NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD 338
           N   I    A+  +  T   DK+A ++   PF  L+
Sbjct: 118 NHTTITQAFADIGLVYT-MPDKEAESV---PFLSLN 149

[164][TOP]
>UniRef100_B3F391 RNA-dependent RNA polymerase (Fragment) n=2 Tax=uncultured marine
           RNA virus RepID=B3F391_9VIRU
          Length = 139

 Score = 64.3 bits (155), Expect = 6e-09
 Identities = 34/77 (44%), Positives = 48/77 (62%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N + +RY YR L P  E   F++ V L+ YGDDN+++V+    SWF
Sbjct: 59  PSGHPLTVIINSLANALYMRYCYRILNPVHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117

Query: 231 NGEAIRVTLAEKKVKIT 281
           N  +I  TL E  +  T
Sbjct: 118 NHTSIANTLKEIGITYT 134

[165][TOP]
>UniRef100_Q6WGS9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS9_9PICO
          Length = 148

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++ V L+ YGDDN++        WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMGFK---QDWF 114

Query: 231 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 311
           N  AI   LA   V+ T  D   K  P+I
Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143

[166][TOP]
>UniRef100_Q6A2S5 Polyprotein (Fragment) n=1 Tax=Potato black ringspot virus
           RepID=Q6A2S5_9SECO
          Length = 252

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179
           R      +VF+V  G+PSG ALTV++NSVFNEILIRY Y+ + P PE  RF+  V L V
Sbjct: 194 RKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVVPSPEFNRFETFVTLAV 252

[167][TOP]
>UniRef100_Q6WGR9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGR9_9PICO
          Length = 151

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 35/95 (36%), Positives = 55/95 (57%)
 Frame = +3

Query: 27  VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206
           + + N   PSG  LTV++NS+ N + +RYAY  L  + +   F+  V L  YGDDN+  V
Sbjct: 50  IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNLQKDLLTFKHHVALFTYGDDNICGV 109

Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311
           +  CA +F    I+  LAE  ++ T  +DK+A ++
Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142

[168][TOP]
>UniRef100_A4UVR7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR7_SDV
          Length = 319

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
 Frame = +3

Query: 147 CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KP 323
           C F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+   + TI+P  P
Sbjct: 21  CAFHEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIP 78

Query: 324 FWELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVI 497
             E+DFLKR+F+  D+G   I  PL   +I   L+++                 G  D +
Sbjct: 79  LEEVDFLKRQFI-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDEL 121

Query: 498 EELVLNVNVALMELYLH 548
             L LNV  AL E + H
Sbjct: 122 AALELNVATALCEAFFH 138

[169][TOP]
>UniRef100_B3F386 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F386_9VIRU
          Length = 139

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N I +RY Y  L P  E   F+  V L+ YGDDN+++V+  C  W+
Sbjct: 59  PSGNPLTVILNSIVNCIRMRYVYLVLNPDKEVETFKNNVSLMTYGDDNIMTVSEEC-DWY 117

Query: 231 NGEAIRVTLAEKKVKIT 281
           N  AI     E  V  T
Sbjct: 118 NHTAISQAFKESGVVYT 134

[170][TOP]
>UniRef100_Q6WGS1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified
           picorna-like virus RepID=Q6WGS1_9PICO
          Length = 148

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV+VNS+ N + +RY Y  L P  E   F++   L+ YGDDN++        WF
Sbjct: 58  PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENESLLTYGDDNVMGFK---QDWF 114

Query: 231 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 311
           N  AI   LA   V+ T  D   K  P+I
Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143

[171][TOP]
>UniRef100_Q6A2S6 Polyprotein (Fragment) n=1 Tax=Cherry leaf roll virus
           RepID=Q6A2S6_9SECO
          Length = 240

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 30/59 (50%), Positives = 41/59 (69%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179
           RY+  G +V++V  GLPSG A+TV+++S+FNEILIRYAYR       + RF   V L+V
Sbjct: 182 RYSLCGSQVYEVRAGLPSGCAITVIMDSIFNEILIRYAYRVSVGPILRNRFNHFVKLVV 240

[172][TOP]
>UniRef100_B3F385 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F385_9VIRU
          Length = 139

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++N + N +  RY Y  L P  E   F+  V L+ YGDDN++ V+P  A WF
Sbjct: 59  PSGHPLTVIINGLANSLYNRYCYFILNPNSEVHSFKNNVNLMTYGDDNIMGVSPE-APWF 117

Query: 231 NGEAIRVTLAEKKVKIT 281
           N  AI   L++  V  T
Sbjct: 118 NHTAIADALSKIGVTYT 134

[173][TOP]
>UniRef100_Q672I1 Capsid protein n=1 Tax=Sapovirus Hu/Dresden/pJG-Sap01/DE
            RepID=POLG_SVSAP
          Length = 2280

 Score = 60.5 bits (145), Expect = 9e-08
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
            +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 1551

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDD + SV P+ AS F+     +T    K    D SD   PT  P       FLKR F +
Sbjct: 1552 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 1605

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSK 440
               GV +A LD+T+I    YWL  ++
Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630

[174][TOP]
>UniRef100_Q9IPD8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sapovirus
           Ebt3/1996/JPN RepID=Q9IPD8_9CALI
          Length = 261

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12  FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 65  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 124

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDD + SV P+ AS F+     +T    K    D SD   PT  P       FLKR F +
Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 178

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440
              GV +A LD+T+I    YWL  ++
Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203

[175][TOP]
>UniRef100_Q6XDK5 Polyprotein n=1 Tax=Sapovirus Mc114 RepID=Q6XDK5_9CALI
          Length = 2280

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
            +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1551

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDD + SV P+ AS F+     +T    K    D SD   PT  P       FLKR F +
Sbjct: 1552 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 1605

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSK 440
               GV +A LD+T+I    YWL  ++
Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630

[176][TOP]
>UniRef100_Q0PWW7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Dandelion yellow
           mosaic virus RepID=Q0PWW7_9VIRU
          Length = 262

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR------FQQT 164
           R + V   V  +  G PSGF +TV+ NS  N   +  A+  LA    +        F++ 
Sbjct: 118 RLSLVKGAVLSIGGGGPSGFPMTVIFNSYINLFYLMSAWSHLATDNGRVDIQHPSFFKKY 177

Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEP-KPFWELD 338
           V   VYGDDN++S+     SW+N  ++   L +   V +TDG   +A   +P     E D
Sbjct: 178 VRACVYGDDNIVSIKEEVISWYNLCSVSDFLKKAFGVTMTDGEKNEAHLAKPYGKILEFD 237

Query: 339 FLKRKFL--KLDTGVIQAPLDMTAI 407
           FLKR F        +  APL+  +I
Sbjct: 238 FLKRGFFPDSQIPSLFHAPLNKVSI 262

[177][TOP]
>UniRef100_Q69014 Capsid protein (Fragment) n=1 Tax=Sapporo virus-Manchester
            RepID=POLG_SVM93
          Length = 2208

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12   FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
            +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 1420 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1479

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
            GDD + SV P+ AS F+     +T    K    D SD   PT  P       FLKR F +
Sbjct: 1480 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 1533

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSK 440
               G I+A LD+T+I    YWL  ++
Sbjct: 1534 TPHG-IRALLDITSITRQFYWLKANR 1558

[178][TOP]
>UniRef100_Q91EJ7 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Lyon/30388/98/F
           RepID=Q91EJ7_9CALI
          Length = 827

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12  FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 39  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 98

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDD + SV P+ AS F+     +T    K    D SD   PT  P       FLKR F +
Sbjct: 99  GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 152

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440
              GV +A LD+T+I    YWL  ++
Sbjct: 153 TPHGV-RALLDITSITRQFYWLKANR 177

[179][TOP]
>UniRef100_O93123 Polyprotein (Fragment) n=1 Tax=Sapporo virus-Houston/86
           RepID=O93123_9CALI
          Length = 853

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12  FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 65  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 124

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDD + SV P+ AS F+     +T    K    D SD   PT  P       FLKR F +
Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 178

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440
              GV +A LD+T+I    YWL  ++
Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203

[180][TOP]
>UniRef100_O12155 Polymerase and capsid polyprotein (Fragment) n=1 Tax=Sapporo
           virus-Sapporo RepID=O12155_9CALI
          Length = 861

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12  FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 72  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 131

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDD + SV P+ AS F+     +T    K    D SD   PT  P       FLKR F +
Sbjct: 132 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 185

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440
              GV +A LD+T+I    YWL  ++
Sbjct: 186 TPHGV-RALLDITSITRQFYWLKANR 210

[181][TOP]
>UniRef100_C4PBJ5 Truncated polyprotein (Fragment) n=1 Tax=Sapovirus Hu/697/2005/BGD
           RepID=C4PBJ5_9CALI
          Length = 344

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12  FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
           +V    F    GLPSG   T VVNS+ + I I  A  +       P      Q   +  Y
Sbjct: 20  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 79

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDD + SV P+ AS F+     +T    K    D S+   PT  P       FLKR F +
Sbjct: 80  GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPTNTPV------FLKRTFTQ 133

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440
              GV +A LD+T+I    YWL  ++
Sbjct: 134 TPHGV-RALLDITSITRQFYWLKANR 158

[182][TOP]
>UniRef100_Q2WFL9 Polyprotein (Fragment) n=2 Tax=Sapovirus GI RepID=Q2WFL9_9CALI
          Length = 358

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12  FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
           +V    F    GLPSG   T V+NS+ + I I  A  +       P      Q   +  Y
Sbjct: 36  YVNDIKFVTRGGLPSGMPFTSVINSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 95

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDD + SV P+ AS F+     +T    K    D S+   PT  P       FLKR F +
Sbjct: 96  GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPTNTPV------FLKRTFTQ 149

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440
              GV +A LD+T+I    YWL  ++
Sbjct: 150 TPHGV-RALLDITSITRQFYWLKANR 174

[183][TOP]
>UniRef100_Q2HWK3 Polyprotein n=1 Tax=Rhizosolenia setigera RNA virus
            RepID=Q2HWK3_9VIRU
          Length = 1605

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
 Frame = +3

Query: 51   PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS----- 215
            PSG  LTV  NS+ N +  R A+RK+ P     R++  V L+ YGDD  +SV+P      
Sbjct: 1396 PSGQNLTVYTNSIVNSLYHRCAFRKIYPN-FSGRYRDAVALMTYGDDVKMSVSPKFPDYN 1454

Query: 216  ---CASWFNGEAIRVTLAEKK-VKITDGSDKDAPTIEPKPFWELDF-LKRKFLKLDTGVI 380
                 S FN + I  T+AEK+   +     +DA  ++ K  WE  +        ++ G+ 
Sbjct: 1455 HTRIQSEFNKQGIEYTMAEKEAASVPFIQHEDADFLKRKSRWEPSYSYTEGDGTINKGMW 1514

Query: 381  QAPLDMTAIFSSLYWLTPSKDK 446
             A LD  +IF SL+    SK K
Sbjct: 1515 LAMLDEESIFKSLHANLASKVK 1536

[184][TOP]
>UniRef100_B3F393 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F393_9VIRU
          Length = 139

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 29/70 (41%), Positives = 42/70 (60%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++NS+ N + IRY+Y    P  E   F+  V LI YGDDN + ++ +   WF
Sbjct: 59  PSGHPLTVIINSLVNSLYIRYSYYLTNPNQEIDTFKDNVALITYGDDNAMGISNN-VPWF 117

Query: 231 NGEAIRVTLA 260
           N  +I+  L+
Sbjct: 118 NHTSIQQALS 127

[185][TOP]
>UniRef100_Q6A1Z2 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus
           RepID=Q6A1Z2_ARMV
          Length = 236

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 25/58 (43%), Positives = 40/58 (68%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 176
           R +  G +V++   G+PSG ALTVV+NS+FNE+L+RY ++K+ P   +  F + V L+
Sbjct: 178 RLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLV 235

[186][TOP]
>UniRef100_Q27J85 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Maizuru/6728/JP
           RepID=Q27J85_9CALI
          Length = 366

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
 Frame = +3

Query: 12  FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182
           +V    F    GLPSG   T VVNS+ + I +  A  +       P      Q   +  Y
Sbjct: 31  YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 90

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362
           GDD + SV P+ AS F+     +T    K    D S+   PT  P       FLKR F +
Sbjct: 91  GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSEAIKPTNTPV------FLKRTFTQ 144

Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440
              GV +A LD+T+I    YWL  ++
Sbjct: 145 TPHGV-RALLDITSITRQFYWLKANR 169

[187][TOP]
>UniRef100_Q1L028 Nonstructural protein n=1 Tax=Homalodisca coagulata virus-1
            RepID=Q1L028_9VIRU
          Length = 1795

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
 Frame = +3

Query: 48   LPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQ---TVCLIVYGDDNLISVAPSC 218
            LPSG  LT +VNS++  ++ RY   K +      +  Q    + L+ YGDD+++S+    
Sbjct: 1589 LPSGHFLTAIVNSLYVNLIFRYLLAKSSKLTSHIQIDQLCRRMKLVSYGDDHIVSIPSGY 1648

Query: 219  ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTGVIQAPLD 395
               FN   +    +E  +  TD +  D    E +   ++ FLKR F  + +     APL 
Sbjct: 1649 EKIFNQSTLPTLFSEIGMTYTDETKSDREVPETRRIEDVTFLKRGFRWEKELNRYVAPLS 1708

Query: 396  MTAIFSSLYWLTPS 437
            +  +  + +W + S
Sbjct: 1709 LDTVLETPFWRSKS 1722

[188][TOP]
>UniRef100_A4UVR5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=Citrus mosaic
           sadwavirus RepID=A4UVR5_SDV
          Length = 319

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
 Frame = +3

Query: 153 FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFW 329
           F +   + +YGDDN +SVA + AS +N E I   L+   VK+ DG+   + TI+P  P  
Sbjct: 23  FYEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIPLE 80

Query: 330 ELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEE 503
           E+DFLKR+F+  D+G   I  PL   +I   L+++                 G  D +  
Sbjct: 81  EVDFLKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELAA 123

Query: 504 LVLNVNVALMELYLH 548
           L LNV  AL E + H
Sbjct: 124 LELNVATALCEAFFH 138

[189][TOP]
>UniRef100_Q27YG9 RNA-directed RNA polymerase n=1 Tax=Nora virus RepID=POLR_NORAV
          Length = 2104

 Score = 55.8 bits (133), Expect(2) = 5e-07
 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
 Frame = +3

Query: 21   QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 200
            Q V+K N G  SG   T + N + N+I   YA+ K         ++Q V  + +GDD + 
Sbjct: 1896 QTVYKTNRGNKSGSYTTTIDNCLANDIYGLYAWVKTTGLRSLWDYRQNVSSVAFGDDIIK 1955

Query: 201  SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFW---ELDFLKRKFLKLDT 371
            SV+      +N    R  L      +T GS KD    E KPF     L FLKR F KL+ 
Sbjct: 1956 SVSDEYKDKYNYCTYRDVLNATGHIMTPGS-KDG---EEKPFTSFENLQFLKRGF-KLEN 2010

Query: 372  GVIQAPLDMTAIFSSLYWLTPSKDK 446
            G++ APL   +I     W    +D+
Sbjct: 2011 GMVLAPLLQRSIEGPFVWTDIREDQ 2035

 Score = 21.9 bits (45), Expect(2) = 5e-07
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 479  WGG*CYRRACSQCECGIDGTI 541
            WG   Y   C + +CG + T+
Sbjct: 2053 WGEEYYNELCQKLKCGTNRTL 2073

[190][TOP]
>UniRef100_Q9DSN9 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q9DSN9_9VIRU
          Length = 1906

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 17/196 (8%)
 Frame = +3

Query: 18   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCR----FQQTVC 170
            G  V+ +    PSG   T  +N   N + +R  +   + K       KC     F + V 
Sbjct: 1693 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKCYVMKDFSKHVS 1752

Query: 171  LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIEPKPFWE 332
            ++ YGDDN+I+ +   + WFN E I     +     TD   G + + P   TIE     +
Sbjct: 1753 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGKNGEVPKWRTIE-----D 1807

Query: 333  LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506
            + +LKRKF + D+   V +APL M  I     W                  G +D+ E  
Sbjct: 1808 VQYLKRKF-RYDSKRKVWEAPLCMDTILEMPNWC----------------RGSLDIQEGT 1850

Query: 507  VLNVNVALMELYLHND 554
             +N   A+MEL +H +
Sbjct: 1851 KVNCENAIMELSMHEE 1866

[191][TOP]
>UniRef100_A7LM73 Polyprotein n=1 Tax=Honey bee slow paralysis virus RepID=A7LM73_9VIRU
          Length = 2964

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
 Frame = +3

Query: 45   GLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDNLISVAP 212
            G+ SG  +T  +NS   +  I+ A+    R+L  K     F +   ++VYGDD ++SV+ 
Sbjct: 2771 GIASGSPITAELNSEVGKKYIKLAFLGICRQLNYKYSLNDFNKHCRVVVYGDDLILSVSD 2830

Query: 213  SCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL--KLDTGVIQA 386
            +  SWFN ++I   L    +++TD + KD   ++ +P  +  FLKR F      +G+  A
Sbjct: 2831 AFVSWFNLQSISEYLDNYGIRLTDVT-KDGTIVKYRPLADSSFLKRSFKPHPSRSGIYLA 2889

Query: 387  PLDMTAIFSSLYWLTPSKDK 446
            P++  +      W     D+
Sbjct: 2890 PIEPRSYQECTNWCHKQNDE 2909

[192][TOP]
>UniRef100_Q8BDE0 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q8BDE0_9VIRU
          Length = 1904

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 17/196 (8%)
 Frame = +3

Query: 18   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 170
            G  V+ +    PSG   T  +N   N + +R  +   + K              F + V 
Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750

Query: 171  LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIEPKPFWE 332
            ++ YGDDN+I+ +   + WFN E I     +     TD   G++ + P   TIE     +
Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805

Query: 333  LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506
            + +LKRKF + D+   V +APL M  I     W                  G +D+ E  
Sbjct: 1806 VQYLKRKF-RYDSKRKVWEAPLSMDTILEMPNWC----------------RGGLDIQEGT 1848

Query: 507  VLNVNVALMELYLHND 554
             +N   A+MEL +H +
Sbjct: 1849 KVNCENAIMELSMHEE 1864

[193][TOP]
>UniRef100_Q5Y975 Nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 1
            RepID=Q5Y975_9VIRU
          Length = 1396

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 17/183 (9%)
 Frame = +3

Query: 51   PSGFALTVVVNSVFNEILIRYAY---------------RKLAPKPEKCRFQQTVCLIVYG 185
            PSG   T  +N + N I +R  +               +K   K     F+  V LI YG
Sbjct: 1188 PSGNPATTPLNCLINSIGLRLCFLRCFEEHKAFFMELMKKFGCKTRMELFRLLVSLISYG 1247

Query: 186  DDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFL- 359
            DDN+I++ P  +  FN   I    AE     TD + +    + + K   E+ FLKR F+ 
Sbjct: 1248 DDNVINIHPLISHLFNMNTITKYFAEFGFTYTDETKQVGKGVPDYKTLEEVSFLKRGFIF 1307

Query: 360  KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539
              +     APLD+  I   + W+                  ++D +E   +N   A+MEL
Sbjct: 1308 NEERNCYDAPLDINTILEMINWVRK----------------DLDQVESTKINCENAIMEL 1351

Query: 540  YLH 548
             +H
Sbjct: 1352 AMH 1354

[194][TOP]
>UniRef100_Q8BDE1 Replicase polyprotein n=1 Tax=Acute bee paralysis virus
            RepID=Q8BDE1_9VIRU
          Length = 1904

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 16/195 (8%)
 Frame = +3

Query: 18   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 170
            G  V+ +    PSG   T  +N   N + +R  +   + K              F + V 
Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750

Query: 171  LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIEPKPFWE 332
            ++ YGDDN+I+ +   + WFN E I     +     TD   G++ + P   TIE     +
Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805

Query: 333  LDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELV 509
            + +LKRKF       V +APL M  I     W                  G +DV E   
Sbjct: 1806 VQYLKRKFRYDFKRKVWEAPLCMDTILEMPNWC----------------RGGLDVQEGTK 1849

Query: 510  LNVNVALMELYLHND 554
            +N   A+MEL +H +
Sbjct: 1850 VNCENAIMELSMHEE 1864

[195][TOP]
>UniRef100_B3F398 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F398_9VIRU
          Length = 137

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG +LT   N + N IL RYA+ + +P+  + RF++ V L+VYGDDN   V+ S   WF
Sbjct: 58  PSGISLTTWTNCIINSILQRYAFFR-SPRSARFRFRECVSLMVYGDDNAAGVS-SEVKWF 115

Query: 231 NGEAIRVTLAEKKVKIT 281
           N   I  +L +  ++ T
Sbjct: 116 NHTTIATSLQQCGIEYT 132

[196][TOP]
>UniRef100_B1A455 Replication-associated polyprotein (Fragment) n=1 Tax=Black raspberry
            necrosis virus RepID=B1A455_9SECO
          Length = 983

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 5/100 (5%)
 Frame = +3

Query: 3    RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVC 170
            R   V  +++ V  G PSGFALTV++NS+ N+  + +A+RK    ++P     R  ++ C
Sbjct: 868  RRILVLSELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMARISPSMVTYRIMRSHC 927

Query: 171  LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDG 287
               VYGDDN++S + +    +N   I   L    V ++DG
Sbjct: 928  TFSVYGDDNVVSFSLAVRDMYNLCTIADELKTIGVTLSDG 967

[197][TOP]
>UniRef100_B3F392 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine
           RNA virus RepID=B3F392_9VIRU
          Length = 139

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = +3

Query: 51  PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230
           PSG  LTV++N + N + +RYAY  L        F+  V L+ YGDDN+++V     SWF
Sbjct: 59  PSGHPLTVIINGLVNSLYMRYAYTVLNEYGHCNDFKSNVNLMTYGDDNILNVNKD-ISWF 117

Query: 231 NGEAIRVTLAE 263
           N  +I   LAE
Sbjct: 118 NHTSISQALAE 128

[198][TOP]
>UniRef100_B3TZF0 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees
            RepID=B3TZF0_9VIRU
          Length = 1950

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 8/185 (4%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDN 194
            V+ +    PSG   T  +N   N + +R  +    ++ A K     F + V ++ YGDDN
Sbjct: 1745 VYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICAKEAAVKMTMKDFGKHVSMVSYGDDN 1804

Query: 195  LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIEPKPFWELDFLKRKF-LK 362
            +I+ +     W+N E I           TD   G++ + P  + +   ++ +LKRKF   
Sbjct: 1805 VINFSDEVCEWYNMETIAKAFETLGFTYTDELKGANGEVP--KWRSIKDVQYLKRKFRYD 1862

Query: 363  LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542
                V +APL M  I     W                  G +D+ E   LN   A+MEL 
Sbjct: 1863 EQRKVWEAPLCMDTILEMPNWC----------------RGGLDIQEGTKLNCENAIMELS 1906

Query: 543  LHNDS 557
            +H +S
Sbjct: 1907 MHEES 1911

[199][TOP]
>UniRef100_B2BHW5 Non-structural polyprotein n=1 Tax=Black queen cell virus
            RepID=B2BHW5_9VIRU
          Length = 1628

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 14/182 (7%)
 Frame = +3

Query: 48   LPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVYGDDNLISVAPSC 218
            LPSG  LT ++NSVF  +++   + +  PK        F +   ++ YGDD+++SV    
Sbjct: 1430 LPSGHYLTAIINSVFVNLVMCLVFMEANPKYSFTTASSFFRECGIVAYGDDHVVSVPEKY 1489

Query: 219  ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRK-----FLKLDTGVIQ 383
             S FN + + V +++  +           TIE K   E+DFL RK     +LK +    +
Sbjct: 1490 LSVFNQQTLPVLMSKFGMFY---------TIETKDDTEIDFLSRKLEDVSYLKRNFVYDE 1540

Query: 384  ------APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 545
                  APL +  I     W   S+                DV+  +  N+  AL EL L
Sbjct: 1541 PRQRYIAPLSLDVILEMPMWTKSSR----------------DVVTNVFCNLEHALKELSL 1584

Query: 546  HN 551
            H+
Sbjct: 1585 HD 1586

[200][TOP]
>UniRef100_Q6A2S7 Polyprotein (Fragment) n=1 Tax=Arracacha virus B RepID=Q6A2S7_9SECO
          Length = 251

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRF 155
           RY   G  V+KV+ G+PSGF LTV+VNS+ N   + +AYRKL  +  K  F
Sbjct: 191 RYGIAGLGVYKVSSGIPSGFPLTVIVNSLVNSFFLHFAYRKLMSQSLKSHF 241

[201][TOP]
>UniRef100_Q1XEP0 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEP0_9SECO
          Length = 239

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179
           R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+V
Sbjct: 181 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239

[202][TOP]
>UniRef100_Q1XEN9 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEN9_9SECO
          Length = 239

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179
           R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+V
Sbjct: 181 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239

[203][TOP]
>UniRef100_Q1XEN8 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus
           RepID=Q1XEN8_9SECO
          Length = 239

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 25/59 (42%), Positives = 38/59 (64%)
 Frame = +3

Query: 3   RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179
           R +  G   ++V  G+PSG ALTV++NS+FNEIL+R  Y+ + P   +  F + V L+V
Sbjct: 181 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239

[204][TOP]
>UniRef100_O36184 Nonstructural polyprotein n=1 Tax=Plautia stali intestine virus
            RepID=O36184_9VIRU
          Length = 1811

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 8/183 (4%)
 Frame = +3

Query: 24   KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR-----FQQTVCLIVYGD 188
            K++  +  LPSG  LT ++NS+F  I + YA+ +   K  +       F     ++ YGD
Sbjct: 1602 KLYYWSKSLPSGHFLTSIINSIFVNIAMCYAFVESQEKGNRSEENIRVFFNDFSIVTYGD 1661

Query: 189  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF---L 359
            D++I V       FN   +   L    +  T         I+ +   E+ F+KR F    
Sbjct: 1662 DHVIGVPEKYVEDFNQLTLPKLLKTLGLDYTMEDKDRICDIKSRKLEEVTFIKRSFRYVK 1721

Query: 360  KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539
            +LD  +  APLD+ +I   + W               Q SGE + +     NV+ AL EL
Sbjct: 1722 ELDRWL--APLDLNSILDCMNW---------------QRSGEDEGLNAQA-NVSFALKEL 1763

Query: 540  YLH 548
             LH
Sbjct: 1764 SLH 1766

[205][TOP]
>UniRef100_Q8B594 Nonstructural polyprotein n=1 Tax=Aphid lethal paralysis virus
            RepID=Q8B594_ALPV
          Length = 2035

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
 Frame = +3

Query: 27   VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL---APKPEKCRFQQTVCLIVYGDDNL 197
            ++ V  G+PSG   T ++NS+ N   +  ++  +    P      F +    I YGDD +
Sbjct: 1821 IYYVRNGIPSGCPATAILNSIVNHCCLADSWLDIMDGTPYATMNSFFEHTSSIFYGDDFI 1880

Query: 198  ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTG 374
            +++ P     +N E +   L +          K    ++ +   E+ FLKRKF  +   G
Sbjct: 1881 MNIRPEVIDVYNQETLTPVLKKNLEMTMTDEAKTGECVKARTLEEVSFLKRKFRFESFVG 1940

Query: 375  VIQAPLDMTAIFSSLYWL 428
            +  AP+D+  I  +  W+
Sbjct: 1941 LWVAPIDIDVILDAPNWV 1958

[206][TOP]
>UniRef100_O56050 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
            RepID=O56050_9VIRU
          Length = 1998

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
 Frame = +3

Query: 18   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 188
            G  ++ V  G+PSG  +T  +NS+ N++ + Y +  +   P K     F +    + YGD
Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALVYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838

Query: 189  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD 368
            D ++++       FN   I   +++    +     K    ++ +   E++FLKR F   +
Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897

Query: 369  TGVIQ--APLDMTAIFSSLYW 425
            T + +  APLD+T I  S  W
Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918

[207][TOP]
>UniRef100_A9QXE1 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus
            RepID=A9QXE1_9VIRU
          Length = 1998

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
 Frame = +3

Query: 18   GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 188
            G  ++ V  G+PSG  +T  +NS+ N++ + Y +  +   P K     F +    + YGD
Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALIYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838

Query: 189  DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD 368
            D ++++       FN   I   +++    +     K    ++ +   E++FLKR F   +
Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897

Query: 369  TGVIQ--APLDMTAIFSSLYW 425
            T + +  APLD+T I  S  W
Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918

[208][TOP]
>UniRef100_Q9WCE9 Polyprotein n=1 Tax=Sacbrood virus RepID=Q9WCE9_9VIRU
          Length = 2858

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15   VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182
            V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 2651 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 2710

Query: 183  GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299
            GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 2711 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 2749

[209][TOP]
>UniRef100_Q994U1 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994U1_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 84  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122

[210][TOP]
>UniRef100_Q994T9 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T9_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGNKERGQTWESFKQNVELFCY 83

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 84  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122

[211][TOP]
>UniRef100_Q994T5 Polyprotein (Fragment) n=3 Tax=Sacbrood virus RepID=Q994T5_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 84  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122

[212][TOP]
>UniRef100_Q994T0 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T0_9VIRU
          Length = 174

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
 Frame = +3

Query: 15  VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 24  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSRERGQTWESFKQNVELFCY 83

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL- 359
           GDD ++SV       FN   I   LA+  +  TD ++K    +         FLK  F  
Sbjct: 84  GDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEEVVAYTTLLNSTFLKHGFRP 142

Query: 360 -KLDTGVIQAPLDMTAIFSSLYWLTPSKD 443
            ++   + Q+ L  ++I  +  W+    D
Sbjct: 143 HEVYPHLWQSALAWSSINDTTQWIWECAD 171

[213][TOP]
>UniRef100_Q80MT3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sacbrood virus
           RepID=Q80MT3_9VIRU
          Length = 186

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 31  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 90

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 91  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 129

[214][TOP]
>UniRef100_Q80MT2 RNA-dependent RNA polymerase (Fragment) n=5 Tax=Sacbrood virus
           RepID=Q80MT2_9VIRU
          Length = 186

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182
           V   +++  CG PSG  +TVV+N++ N + I  A+  L    E+ +    F+Q V L  Y
Sbjct: 28  VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 87

Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299
           GDD ++SV       FN   I   LA+  +  TD +  D
Sbjct: 88  GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 126