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[1][TOP] >UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08 Length = 824 Score = 328 bits (841), Expect = 2e-88 Identities = 160/192 (83%), Positives = 173/192 (90%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 RYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VY Sbjct: 326 RYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVY 385 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK Sbjct: 386 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 445 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 LD G++QAPLD +AIFSSLYWLTP K KFH QK S + GEVDVIEEL+LNVNVALMELY Sbjct: 446 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELY 505 Query: 543 LHNDSKEFQRVQ 578 LHND EFQRV+ Sbjct: 506 LHNDVAEFQRVR 517 [2][TOP] >UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus RepID=POL1_TBRVM Length = 2266 Score = 328 bits (841), Expect = 2e-88 Identities = 160/192 (83%), Positives = 173/192 (90%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 RYAFVGQ+V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VY Sbjct: 1768 RYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPAPERNRFGSTVCLLVY 1827 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK Sbjct: 1828 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 1887 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 LD G++QAPLD +AIFSSLYWLTP K KFH QK S + GEVDVIEEL+LNVNVALMELY Sbjct: 1888 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELY 1947 Query: 543 LHNDSKEFQRVQ 578 LHND EFQRV+ Sbjct: 1948 LHNDVAEFQRVR 1959 [3][TOP] >UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus RepID=UPI0000163E03 Length = 824 Score = 328 bits (840), Expect = 2e-88 Identities = 157/192 (81%), Positives = 173/192 (90%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 RYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VY Sbjct: 326 RYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVY 385 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK Sbjct: 386 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 445 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 LD G++QAPLD +AIFSSLYWLTP K KFH Q+AS + G VDV+EEL+LNVNVALMELY Sbjct: 446 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELY 505 Query: 543 LHNDSKEFQRVQ 578 LHND +EF RV+ Sbjct: 506 LHNDPREFSRVR 517 [4][TOP] >UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus RepID=POL1_BRSV Length = 2264 Score = 328 bits (840), Expect = 2e-88 Identities = 157/192 (81%), Positives = 173/192 (90%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 RYAFVG +V+KVNCGLPSGFALTVVVNSVFNEILIRYAY+KLAPKPE+ RF Q VCL+VY Sbjct: 1766 RYAFVGPEVYKVNCGLPSGFALTVVVNSVFNEILIRYAYKKLAPKPERNRFNQVVCLLVY 1825 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLISV+PS ASWF GEAIR+TLAEKKVKITDGSDKDAPTIE K FWELDFLKRKFLK Sbjct: 1826 GDDNLISVSPSIASWFTGEAIRITLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLK 1885 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 LD G++QAPLD +AIFSSLYWLTP K KFH Q+AS + G VDV+EEL+LNVNVALMELY Sbjct: 1886 LDNGIVQAPLDRSAIFSSLYWLTPDKSKFHASQRASDFQGTVDVVEELILNVNVALMELY 1945 Query: 543 LHNDSKEFQRVQ 578 LHND +EF RV+ Sbjct: 1946 LHNDPREFSRVR 1957 [5][TOP] >UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus RepID=UPI00017F0C90 Length = 826 Score = 282 bits (721), Expect = 2e-74 Identities = 139/193 (72%), Positives = 162/193 (83%), Gaps = 1/193 (0%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 RYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK F VCL+VY Sbjct: 324 RYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVY 383 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-L 359 GDDNLISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE KPF ELDFLKRKF + Sbjct: 384 GDDNLISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYV 443 Query: 360 KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539 + G + APLD +AIFS L+WLTP K KF +KA Y GEVDV+EEL++NVNV+L+EL Sbjct: 444 HPEHGQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVEL 503 Query: 540 YLHNDSKEFQRVQ 578 YLHND +EF RV+ Sbjct: 504 YLHNDKEEFNRVR 516 [6][TOP] >UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus RepID=POL1_GCMV Length = 2252 Score = 282 bits (721), Expect = 2e-74 Identities = 139/193 (72%), Positives = 162/193 (83%), Gaps = 1/193 (0%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 RYA VG +V+KVNCGLPSGFALTVV+NS+FNEILIRYAY+ LAP PEK F VCL+VY Sbjct: 1750 RYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSFGINVCLLVY 1809 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-L 359 GDDNLISV+P+ ASWF GEAIRVTLAEK++KITDGSDKDAPTIE KPF ELDFLKRKF + Sbjct: 1810 GDDNLISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSELDFLKRKFYV 1869 Query: 360 KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539 + G + APLD +AIFS L+WLTP K KF +KA Y GEVDV+EEL++NVNV+L+EL Sbjct: 1870 HPEHGQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELIINVNVSLVEL 1929 Query: 540 YLHNDSKEFQRVQ 578 YLHND +EF RV+ Sbjct: 1930 YLHNDKEEFNRVR 1942 [7][TOP] >UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus RepID=UPI00003FE52F Length = 846 Score = 211 bits (537), Expect = 3e-53 Identities = 111/192 (57%), Positives = 135/192 (70%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R A GQ+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P++ F V L+VY Sbjct: 334 RLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVY 393 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNL+S A +FNGE I+ TL +K V ITDGSDK AP I+ K ELDFLKR+FLK Sbjct: 394 GDDNLMSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLK 453 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 L+TGV+QAPLD+TAIFS L+W+TP K Q VD + EL LNV VAL ELY Sbjct: 454 LETGVVQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELY 512 Query: 543 LHNDSKEFQRVQ 578 LH + +EFQRV+ Sbjct: 513 LHGNKEEFQRVR 524 [8][TOP] >UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus RepID=POL1_CNSV Length = 2336 Score = 211 bits (537), Expect = 3e-53 Identities = 111/192 (57%), Positives = 135/192 (70%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R A GQ+V +V GLPSGFALTVV+NSVFNEIL+RY ++ L P++ F V L+VY Sbjct: 1824 RLAITGQEVMRVRAGLPSGFALTVVINSVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVY 1883 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNL+S A +FNGE I+ TL +K V ITDGSDK AP I+ K ELDFLKR+FLK Sbjct: 1884 GDDNLMSCTDKIAIYFNGETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLK 1943 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 L+TGV+QAPLD+TAIFS L+W+TP K Q VD + EL LNV VAL ELY Sbjct: 1944 LETGVVQAPLDLTAIFSCLHWVTPHPQKMPKGGAQLQVE-NVDTLYELALNVQVALTELY 2002 Query: 543 LHNDSKEFQRVQ 578 LH + +EFQRV+ Sbjct: 2003 LHGNKEEFQRVR 2014 [9][TOP] >UniRef100_Q9QRA9 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA9_9SECO Length = 985 Score = 187 bits (475), Expect = 5e-46 Identities = 97/192 (50%), Positives = 125/192 (65%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F Q VCLIVY Sbjct: 601 RWSICGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRVTVPRPLVNNFNQEVCLIVY 660 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLISV P +FNG+ I+ LA+ KV ITDGSDK++P + KP +LDFLKR F Sbjct: 661 GDDNLISVKPDTMKYFNGDRIKEVLAKFKVTITDGSDKNSPVLRAKPLKQLDFLKRGFKV 720 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G + APLD+ AIFSSLY++ P + + + L LN VAL ELY Sbjct: 721 QSDGRVLAPLDLQAIFSSLYYINP----------------QGNTLNSLFLNAQVALRELY 764 Query: 543 LHNDSKEFQRVQ 578 LHND ++F V+ Sbjct: 765 LHNDIEQFTAVR 776 [10][TOP] >UniRef100_UPI00003FE53F RNA-dependent RNA polymerase n=1 Tax=Tomato ringspot virus RepID=UPI00003FE53F Length = 711 Score = 186 bits (472), Expect = 1e-45 Identities = 95/192 (49%), Positives = 127/192 (66%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVY Sbjct: 327 RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 386 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLIS+ P +FNGE I+ LA+ KV ITDGSDK++P + KP +LDFLKR F Sbjct: 387 GDDNLISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 446 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G + APLD+ AI+SSLY++ P + ++++ L LN VAL ELY Sbjct: 447 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELY 490 Query: 543 LHNDSKEFQRVQ 578 LH D ++F V+ Sbjct: 491 LHGDVEQFTAVR 502 [11][TOP] >UniRef100_Q9QRA7 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA7_9SECO Length = 985 Score = 186 bits (472), Expect = 1e-45 Identities = 95/192 (49%), Positives = 127/192 (66%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVY Sbjct: 601 RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 660 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLIS+ P +FNGE I+ LA+ KV ITDGSDK++P + KP +LDFLKR F Sbjct: 661 GDDNLISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 720 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G + APLD+ AI+SSLY++ P + ++++ L LN VAL ELY Sbjct: 721 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELY 764 Query: 543 LHNDSKEFQRVQ 578 LH D ++F V+ Sbjct: 765 LHGDVEQFTAVR 776 [12][TOP] >UniRef100_P29150 RNA-directed RNA polymerase n=1 Tax=Tomato ringspot virus (ISOLATE RASPBERRY) RepID=POL1_TORVR Length = 2197 Score = 186 bits (472), Expect = 1e-45 Identities = 95/192 (49%), Positives = 127/192 (66%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVY Sbjct: 1813 RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 1872 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLIS+ P +FNGE I+ LA+ KV ITDGSDK++P + KP +LDFLKR F Sbjct: 1873 GDDNLISIKPDTMKYFNGEQIKTILAKYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 1932 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G + APLD+ AI+SSLY++ P + ++++ L LN VAL ELY Sbjct: 1933 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILKSLFLNAQVALRELY 1976 Query: 543 LHNDSKEFQRVQ 578 LH D ++F V+ Sbjct: 1977 LHGDVEQFTAVR 1988 [13][TOP] >UniRef100_Q9QRA8 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA8_9SECO Length = 985 Score = 185 bits (470), Expect = 2e-45 Identities = 95/192 (49%), Positives = 125/192 (65%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVY Sbjct: 601 RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 660 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLIS+ P +FNGE I+ LA KV ITDGSDK++P + KP +LDFLKR F Sbjct: 661 GDDNLISIKPDTMKYFNGEQIKTILARYKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 720 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G + APLD+ AI+SSLY++ P + +++ L LN VAL ELY Sbjct: 721 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELY 764 Query: 543 LHNDSKEFQRVQ 578 LH D ++F V+ Sbjct: 765 LHGDVEQFTAVR 776 [14][TOP] >UniRef100_Q9QRA6 Polyprotein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA6_9SECO Length = 985 Score = 185 bits (469), Expect = 2e-45 Identities = 95/192 (49%), Positives = 125/192 (65%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R++ GQ+VF+V G+PSG ALTV++NS+FNE+LIRY YR P+P F+Q VCLIVY Sbjct: 601 RWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYVYRITVPRPLVNNFKQEVCLIVY 660 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLIS+ P +FNGE I+ LA KV ITDGSDK++P + KP +LDFLKR F Sbjct: 661 GDDNLISIKPDTMKYFNGEQIKTILANIKVTITDGSDKNSPVLRAKPLKQLDFLKRGFRV 720 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G + APLD+ AI+SSLY++ P + +++ L LN VAL ELY Sbjct: 721 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELY 764 Query: 543 LHNDSKEFQRVQ 578 LH D ++F V+ Sbjct: 765 LHGDVEQFTAVR 776 [15][TOP] >UniRef100_Q155U1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q155U1_9SECO Length = 711 Score = 179 bits (455), Expect = 1e-43 Identities = 91/192 (47%), Positives = 125/192 (65%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R++ GQ+V++V G+PSG ALTV++NS+FNE+LI Y YR P+ F+Q VCLIVY Sbjct: 327 RWSVCGQRVYEVRAGMPSGCALTVIINSLFNELLIGYVYRVTVPRSLVNNFKQEVCLIVY 386 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLIS+ P +FNGE I+ TLA+ ++ ITDGSDK++P + KP +LDFLKR F Sbjct: 387 GDDNLISIKPDTMKYFNGEQIKSTLAKYRITITDGSDKNSPVLRAKPLKQLDFLKRGFRV 446 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G + APLD+ AI+SSLY++ P + +++ L LN VAL ELY Sbjct: 447 ESDGRVLAPLDLQAIYSSLYYINP----------------QGNILNSLFLNAQVALRELY 490 Query: 543 LHNDSKEFQRVQ 578 LH D ++F V+ Sbjct: 491 LHGDVEQFTAVR 502 [16][TOP] >UniRef100_Q88893 RNA-directed RNA polymerase n=1 Tax=Tobacco ringspot virus strain Bud Blight RepID=POL1_TRSVB Length = 2304 Score = 158 bits (399), Expect = 3e-37 Identities = 92/192 (47%), Positives = 115/192 (59%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R +VF+V G+ G ALTV++NSVFNEILIRY Y+ + P PE RF+ V L+VY Sbjct: 1826 RKCLARSQVFEVRGGIRRG-ALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVY 1884 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLI+V PS F GE I+ TLA KK+ ITDGSDK +P +E KP +LDFLKR FL Sbjct: 1885 GDDNLIAVDPSMQKIFTGEVIKKTLARKKITITDGSDKLSPVLEAKPLAQLDFLKRSFLV 1944 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 D+G + LD T I+SSL +L S + D I L NV AL ELY Sbjct: 1945 SDSGQVMPALDRTCIYSSLLYLR---------------SADCDPIPLLHQNVQNALQELY 1989 Query: 543 LHNDSKEFQRVQ 578 D +EF ++ Sbjct: 1990 YRQDREEFDNLR 2001 [17][TOP] >UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus RepID=A2ID54_9SECO Length = 1916 Score = 157 bits (397), Expect = 6e-37 Identities = 84/188 (44%), Positives = 113/188 (60%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+VY Sbjct: 1522 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFNEYVTLLVY 1581 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLI+V PS FNG+ I+ T+A+ +V ITDGSDK +PT+ KP LDFLKR F Sbjct: 1582 GDDNLIAVDPSILEVFNGDVIKKTMAKWRVTITDGSDKLSPTLTEKPLLSLDFLKRGFKL 1641 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 D G + APLD TAI+SSL+W+ DV+ L N AL+E++ Sbjct: 1642 ADNGQVYAPLDKTAIYSSLHWVAGRGQ---------------DVMSALKDNARSALIEMW 1686 Query: 543 LHNDSKEF 566 H D EF Sbjct: 1687 AHQDKAEF 1694 [18][TOP] >UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus RepID=UPI0000163DCE Length = 707 Score = 153 bits (387), Expect = 8e-36 Identities = 85/192 (44%), Positives = 115/192 (59%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++V G+PSG ALTV++NS+FNE LIR+ +R + RF Q V L++Y Sbjct: 318 RKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIY 377 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLI+V P FNGE IR LA+ V ITDGSDK A IE KP +LDFLKR+F K Sbjct: 378 GDDNLIAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRK 437 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 L+ G + APLD+ ++++SL +T H L NV+ AL+ELY Sbjct: 438 LNDGTVYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELY 482 Query: 543 LHNDSKEFQRVQ 578 LH + F ++ Sbjct: 483 LHGNETWFNHLR 494 [19][TOP] >UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus RepID=POL1_BRAV Length = 2094 Score = 153 bits (387), Expect = 8e-36 Identities = 85/192 (44%), Positives = 115/192 (59%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++V G+PSG ALTV++NS+FNE LIR+ +R + RF Q V L++Y Sbjct: 1705 RKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGVPRERFSQYVTLLIY 1764 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNLI+V P FNGE IR LA+ V ITDGSDK A IE KP +LDFLKR+F K Sbjct: 1765 GDDNLIAVHPDYLPHFNGEIIRTRLADVNVIITDGSDKTAEKIEEKPLVQLDFLKRRFRK 1824 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 L+ G + APLD+ ++++SL +T H L NV+ AL+ELY Sbjct: 1825 LNDGTVYAPLDLASVYTSLQNVTMGAGSIHI---------------ALQNNVHNALLELY 1869 Query: 543 LHNDSKEFQRVQ 578 LH + F ++ Sbjct: 1870 LHGNETWFNHLR 1881 [20][TOP] >UniRef100_P29149 RNA-directed RNA polymerase n=1 Tax=Grapevine fanleaf virus RepID=POL1_GFLV Length = 2284 Score = 151 bits (382), Expect = 3e-35 Identities = 80/192 (41%), Positives = 118/192 (61%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V+ G+PSG ALTVV+NS+F E+L+RY ++K+ P K F + V LI Y Sbjct: 1777 RLSICGNQVYATEAGIPSGCALTVVLNSIFKELLMRYCFKKIVPPVYKECFDRCVVLITY 1836 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDN+ +VA S +F G+A+++ +A+ V ITDG DK TI +P EL+FLKR F++ Sbjct: 1837 GDDNVFTVAQSVMQYFTGDALKMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVR 1896 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 G+I APL+ +I SSL ++ S D++++L+ NVN AL+ELY Sbjct: 1897 SSGGMINAPLEKLSIMSSLVYIR---------------SDGSDMLQKLLDNVNTALVELY 1941 Query: 543 LHNDSKEFQRVQ 578 LH D F+ V+ Sbjct: 1942 LHGDRTYFESVR 1953 [21][TOP] >UniRef100_UPI00003FE537 RNA-dependent RNA polymerase n=1 Tax=Arabis mosaic virus RepID=UPI00003FE537 Length = 825 Score = 150 bits (378), Expect = 9e-35 Identities = 81/192 (42%), Positives = 118/192 (61%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++ G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + F + V LI Y Sbjct: 317 RLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITY 376 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDN+ +V+ S + F G+A++ +A V ITDG DK TI +P EL+FLKR F K Sbjct: 377 GDDNVFTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKK 436 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 + G+I APL+ +I SSL ++ S D++++LV NVN AL+ELY Sbjct: 437 GNGGLIYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELY 481 Query: 543 LHNDSKEFQRVQ 578 LH D + + V+ Sbjct: 482 LHQDREYSESVR 493 [22][TOP] >UniRef100_Q6W8W5 RNA-directed RNA polymerase n=1 Tax=Arabis mosaic virus strain NW RepID=POL1_ARMVN Length = 2284 Score = 150 bits (378), Expect = 9e-35 Identities = 81/192 (42%), Positives = 118/192 (61%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++ G+PSG ALTVV+NS+FNE+L+RY Y+K+ P + F + V LI Y Sbjct: 1776 RLSICGSQVYETEAGIPSGCALTVVINSIFNELLMRYCYKKIVPPIYRECFDRCVVLITY 1835 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDN+ +V+ S + F G+A++ +A V ITDG DK TI +P EL+FLKR F K Sbjct: 1836 GDDNVFTVSQSIMTSFTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKK 1895 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 + G+I APL+ +I SSL ++ S D++++LV NVN AL+ELY Sbjct: 1896 GNGGLIYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELY 1940 Query: 543 LHNDSKEFQRVQ 578 LH D + + V+ Sbjct: 1941 LHQDREYSESVR 1952 [23][TOP] >UniRef100_B4YNP7 Polyprotein 1 n=1 Tax=Arabis mosaic virus RepID=B4YNP7_ARMV Length = 2285 Score = 147 bits (371), Expect = 6e-34 Identities = 79/192 (41%), Positives = 116/192 (60%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++ G+PSG ALTVV+NS+FNE+L+RY ++K+ P + F + V LI Y Sbjct: 1778 RLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLITY 1837 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDN+ +V+ S F G+A++ +A V ITDG DK TI +P EL+FLKR K Sbjct: 1838 GDDNVFTVSQSIMESFTGDALKAEMANVGVTITDGKDKSLATIPARPLLELEFLKRGIKK 1897 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 + G+I APL+ +I SSL ++ S D++++LV NVN AL+EL+ Sbjct: 1898 GNGGMIYAPLEKLSIMSSLVYIR---------------SDGSDMLQKLVDNVNTALVELF 1942 Query: 543 LHNDSKEFQRVQ 578 LH D + F V+ Sbjct: 1943 LHQDKEYFDSVR 1954 [24][TOP] >UniRef100_O37086 RNA1 polyprotein n=1 Tax=Peach rosette mosaic virus RepID=O37086_9SECO Length = 2150 Score = 135 bits (339), Expect = 3e-30 Identities = 78/193 (40%), Positives = 114/193 (59%), Gaps = 1/193 (0%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G++V+ V G+PSG ALTVV+NS+FNEILIRY YRK+ P P F + V L+VY Sbjct: 1756 RRSICGRQVYMVRGGMPSGCALTVVINSIFNEILIRYVYRKVTPAPACNFFNKYVRLMVY 1815 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDDNL+++ +F+G I+ +A + ITDG+DK + T+E KP L+FLKR F Sbjct: 1816 GDDNLLTIKEEVIPFFDGPVIKREMASVGITITDGTDKSSLTLERKPLASLEFLKRGFRV 1875 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 + G++ APLD T++++ L++L + F + NV L E+ Sbjct: 1876 QENGLVVAPLDKTSMYTRLFYLPLALMAFIPGYFSKG-------------NVKSFLEEIV 1922 Query: 543 LH-NDSKEFQRVQ 578 LH N +EF RV+ Sbjct: 1923 LHPNHRREFYRVR 1935 [25][TOP] >UniRef100_B1A4F8 Polyprotein 1 n=1 Tax=Squash mosaic virus RepID=B1A4F8_9SECO Length = 1858 Score = 135 bits (339), Expect = 3e-30 Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 5/188 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V Sbjct: 1472 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 1531 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L+ YGDDNLISV+ A+ FNG ++ +A+ V ITDG DK +PT+E + DFLK Sbjct: 1532 KLVTYGDDNLISVSHVVANVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLK 1591 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F KL+ V +P + +++++ L+++ + +D E ++N+N Sbjct: 1592 RGF-KLNGLVYDSPEEKSSLWAQLHYVNTT---------------SLDKQEAYLVNLNNV 1635 Query: 528 LMELYLHN 551 L ELY+H+ Sbjct: 1636 LKELYMHS 1643 [26][TOP] >UniRef100_UPI0000163D09 RNA-dependent RNA polymerase n=1 Tax=Squash mosaic virus RepID=UPI0000163D09 Length = 711 Score = 133 bits (335), Expect = 9e-30 Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 5/188 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V Sbjct: 325 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 384 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L+ YGDDNLISV+ AS FNG ++ +A+ V ITDG DK +PT+E + DFLK Sbjct: 385 KLVTYGDDNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLK 444 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F KL+ + +P + +++++ L+++ + +D E ++N+N Sbjct: 445 RGF-KLNGLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNV 488 Query: 528 LMELYLHN 551 L ELY+++ Sbjct: 489 LKELYMYS 496 [27][TOP] >UniRef100_Q91PR6 Polyprotein n=1 Tax=Squash mosaic virus RepID=Q91PR6_9SECO Length = 1858 Score = 133 bits (335), Expect = 9e-30 Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 5/188 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V Sbjct: 1472 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 1531 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L+ YGDDNLISV+ AS FNG ++ +A+ V ITDG DK +PT+E + DFLK Sbjct: 1532 KLVTYGDDNLISVSHVVASVFNGRTLKAEMAQFGVTITDGIDKTSPTLEFRKLSNCDFLK 1591 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F KL+ + +P + +++++ L+++ + +D E ++N+N Sbjct: 1592 RGF-KLNGLIYDSPEEKSSLWAQLHYVNTT---------------NLDKQEAYLVNLNNV 1635 Query: 528 LMELYLHN 551 L ELY+++ Sbjct: 1636 LKELYMYS 1643 [28][TOP] >UniRef100_Q24M90 Polyprotein 1 n=1 Tax=Raspberry ringspot virus RepID=Q24M90_9SECO Length = 2366 Score = 128 bits (321), Expect = 4e-28 Identities = 68/144 (47%), Positives = 96/144 (66%), Gaps = 2/144 (1%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++V G+PSGFALTV NS+FNEIL+R AYR L P E+ F V LIVY Sbjct: 1881 RISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPDIERPFFSNNVVLIVY 1940 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPFWELDFLKRKFL 359 GDDN++ + P+ S FNG I+ + E+ +KITDG+DK +P I+ +P + +FLKR + Sbjct: 1941 GDDNVLGIHPNIESVFNGNTIKAYMKEELGIKITDGADKLSPVIDARPLEQCEFLKRTWR 2000 Query: 360 K-LDTGVIQAPLDMTAIFSSLYWL 428 K G+ +APL T+IFS L ++ Sbjct: 2001 KDRQYGLYRAPLVETSIFSCLRYV 2024 [29][TOP] >UniRef100_Q6W8W4 RNA-directed RNA polymerase n=1 Tax=Raspberry ringspot virus strain cherry RepID=POL1_RRVC Length = 2367 Score = 127 bits (318), Expect = 8e-28 Identities = 68/144 (47%), Positives = 97/144 (67%), Gaps = 2/144 (1%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++V G+PSGFALTV NS+FNEIL+R AYR L P+ E+ F V LIVY Sbjct: 1882 RISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVVLIVY 1941 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPFWELDFLKRKFL 359 GDDN++ + P+ S FNG AI+ + E+ +KITDG+DK +P I +P + +FLKR + Sbjct: 1942 GDDNVLGIHPNIESAFNGNAIKAYMKEELGIKITDGADKLSPVICARPLEQCEFLKRTWR 2001 Query: 360 K-LDTGVIQAPLDMTAIFSSLYWL 428 K G+ +APL T+I+S L ++ Sbjct: 2002 KDRQYGLYRAPLVETSIYSCLRYV 2025 [30][TOP] >UniRef100_B4ZF31 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato black ring virus RepID=B4ZF31_9SECO Length = 73 Score = 125 bits (313), Expect = 3e-27 Identities = 61/72 (84%), Positives = 66/72 (91%) Frame = +3 Query: 54 SGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFN 233 SGFALTVVVNSVFNEILIRYAY+KLAP PE+ RF TVCL+VYGDDNLISV+PS ASWF Sbjct: 1 SGFALTVVVNSVFNEILIRYAYKKLAPVPERNRFGSTVCLLVYGDDNLISVSPSIASWFT 60 Query: 234 GEAIRVTLAEKK 269 GEAIR+TLAEKK Sbjct: 61 GEAIRITLAEKK 72 [31][TOP] >UniRef100_Q8JUF2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF2_9SECO Length = 1851 Score = 122 bits (305), Expect = 3e-26 Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 5/194 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + Sbjct: 1465 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFI 1524 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L VYGDDNLISV +F+G ++ LA + ITDG DK + T++ + E DFLK Sbjct: 1525 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 1584 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F ++ + AP D +++S L++++ +++ E ++N+ Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629 Query: 528 LMELYLHNDSKEFQ 569 L ELYLH+ + Q Sbjct: 1630 LRELYLHSPEEACQ 1643 [32][TOP] >UniRef100_Q3L2Z2 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z2_9SECO Length = 1851 Score = 122 bits (305), Expect = 3e-26 Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 5/194 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + Sbjct: 1465 RMAICKKNVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFI 1524 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L VYGDDNLISV +F+G ++ LA + ITDG DK + T++ + E DFLK Sbjct: 1525 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 1584 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F ++ + AP D +++S L++++ +++ E ++N+ Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629 Query: 528 LMELYLHNDSKEFQ 569 L ELYLH+ + Q Sbjct: 1630 LRELYLHSPEEARQ 1643 [33][TOP] >UniRef100_UPI0000163D14 RNA-dependent RNA polymerase n=1 Tax=Cowpea mosaic virus RepID=UPI0000163D14 Length = 711 Score = 120 bits (302), Expect = 6e-26 Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 7/197 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + Sbjct: 324 RLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLI 383 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L+ YGDDNLISV +F+G+ ++ +LA+ V ITDG DK + + + E DFLK Sbjct: 384 GLVTYGDDNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLK 443 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F++ + + AP D +++S L+++ + +K Y + NV Sbjct: 444 RTFVQRSSTIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNV 488 Query: 528 LMELYLHN--DSKEFQR 572 L ELY+H+ ++ EF+R Sbjct: 489 LRELYMHSPREATEFRR 505 [34][TOP] >UniRef100_UPI0000163CF4 putative RNA dependent RNA polymerase n=1 Tax=Bean pod mottle virus RepID=UPI0000163CF4 Length = 710 Score = 120 bits (302), Expect = 6e-26 Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + Sbjct: 324 RMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFI 383 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L VYGDDNLISV +F+G ++ LA + ITDG DK + T++ + E DFLK Sbjct: 384 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 443 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F ++ + AP D +++S L++++ +++ E ++N+ Sbjct: 444 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 488 Query: 528 LMELYLHN 551 L ELYLH+ Sbjct: 489 LRELYLHS 496 [35][TOP] >UniRef100_P03600 RNA-directed RNA polymerase n=1 Tax=Cowpea mosaic virus RepID=POL1_CPMV Length = 1866 Score = 120 bits (302), Expect = 6e-26 Identities = 74/197 (37%), Positives = 113/197 (57%), Gaps = 7/197 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + Sbjct: 1479 RLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLI 1538 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L+ YGDDNLISV +F+G+ ++ +LA+ V ITDG DK + + + E DFLK Sbjct: 1539 GLVTYGDDNLISVNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLK 1598 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F++ + + AP D +++S L+++ + +K Y + NV Sbjct: 1599 RTFVQRSSTIWDAPEDKASLWSQLHYV-----NCNNCEKEVAY----------LTNVVNV 1643 Query: 528 LMELYLHN--DSKEFQR 572 L ELY+H+ ++ EF+R Sbjct: 1644 LRELYMHSPREATEFRR 1660 [36][TOP] >UniRef100_Q9YJU5 RNA-directed RNA polymerase n=1 Tax=Bean-pod mottle virus (strain Kentucky G7) RepID=POL1_BPMV Length = 1850 Score = 120 bits (302), Expect = 6e-26 Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A + +++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ + Sbjct: 1464 RMAICKKDIWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFRNFI 1523 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L VYGDDNLISV +F+G ++ LA + ITDG DK + T++ + E DFLK Sbjct: 1524 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLASHNITITDGIDKTSATLQFRKLSECDFLK 1583 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F ++ + AP D +++S L++++ +++ E ++N+ Sbjct: 1584 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1628 Query: 528 LMELYLHN 551 L ELYLH+ Sbjct: 1629 LRELYLHS 1636 [37][TOP] >UniRef100_Q02941 RNA-directed RNA polymerase (Fragment) n=1 Tax=Andean potato mottle virus RepID=POL1_APMV Length = 729 Score = 120 bits (301), Expect = 8e-26 Identities = 67/177 (37%), Positives = 107/177 (60%), Gaps = 6/177 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK----PEKCR-FQQTV 167 R++ V V++V G+PSGF LTVV+N +FNE+L+RY ++K+ + P +C F + Sbjct: 349 RFSVVKGNVWRVEGGIPSGFPLTVVMNGIFNELLVRYCFKKIMREGGATPLECSAFDSYI 408 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 +VYGDDNLISV+P FNG+ ++ +A V ITDG DK PT+E +P + DFLK Sbjct: 409 RFVVYGDDNLISVSPVIHDKFNGKLLKECMARFGVTITDGKDKTLPTLEFRPLEDCDFLK 468 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGE-VDVIEELVLN 515 R F++ V AP + +++++ L++++ Y+G V+VI EL ++ Sbjct: 469 RGFIQRSELVWDAPEERSSLYTQLHYVSTKMQSLE-----DAYTGNLVNVIRELYMH 520 [38][TOP] >UniRef100_Q8JUF5 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q8JUF5_9SECO Length = 1851 Score = 120 bits (300), Expect = 1e-25 Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 5/194 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V Sbjct: 1465 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFV 1524 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L VYGDDNLISV +F+G ++ LA + ITDG DK + T++ + + DFLK Sbjct: 1525 SLCVYGDDNLISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLK 1584 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F ++ + AP D +++S L++++ +++ E ++N+ Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629 Query: 528 LMELYLHNDSKEFQ 569 L ELYLH+ + Q Sbjct: 1630 LRELYLHSPEEARQ 1643 [39][TOP] >UniRef100_Q3L2Z1 Polyprotein 1 n=1 Tax=Bean pod mottle virus RepID=Q3L2Z1_9SECO Length = 1851 Score = 118 bits (296), Expect = 3e-25 Identities = 70/194 (36%), Positives = 107/194 (55%), Gaps = 5/194 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V Sbjct: 1465 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFV 1524 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 L VYGDDN ISV +F+G ++ LA + ITDG DK + T++ + + DFLK Sbjct: 1525 SLCVYGDDNFISVHEYVKPYFSGSKLKSFLAGHNITITDGIDKTSATLQFRKLADCDFLK 1584 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F ++ + AP D +++S L++++ +++ E ++N+ Sbjct: 1585 RNFKQMSNVLWVAPEDKASLWSQLHYVS---------------CNNLEMQEAYLVNLVNV 1629 Query: 528 LMELYLHNDSKEFQ 569 L ELYLH+ + Q Sbjct: 1630 LRELYLHSPEEARQ 1643 [40][TOP] >UniRef100_Q06RG7 Polymerase (Fragment) n=1 Tax=Turnip ringspot virus RepID=Q06RG7_9SECO Length = 396 Score = 115 bits (288), Expect = 2e-24 Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTV 167 RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V Sbjct: 126 RYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYV 185 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLK Sbjct: 186 GMVTYGDDNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 245 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F K G+ AP + ++++ L+++ + + H K + V+V+ EL + Sbjct: 246 RGFRKDKNGIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 297 [41][TOP] >UniRef100_C9WI17 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C9WI17_9SECO Length = 1857 Score = 115 bits (288), Expect = 2e-24 Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTV 167 RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V Sbjct: 1470 RYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYV 1529 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLK Sbjct: 1530 GMVTYGDDNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 1589 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F K G+ AP + ++++ L+++ + + H K + V+V+ EL + Sbjct: 1590 RGFRKDKNGIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1641 [42][TOP] >UniRef100_C7SW00 Polyprotein n=1 Tax=Turnip ringspot virus RepID=C7SW00_9SECO Length = 1860 Score = 115 bits (288), Expect = 2e-24 Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCRFQQTV 167 RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + K + F + V Sbjct: 1473 RYAICKSDVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMRKQKVPGLISISFDKYV 1532 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLK Sbjct: 1533 GMVTYGDDNLLSVSEVVKPYFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 1592 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F K G+ AP + ++++ L+++ + + H K + V+V+ EL + Sbjct: 1593 RGFRKDKNGIFWNAPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644 [43][TOP] >UniRef100_UPI0000163D04 RNA-dependent RNA polymerase n=1 Tax=Red clover mottle virus RepID=UPI0000163D04 Length = 713 Score = 114 bits (285), Expect = 5e-24 Identities = 62/183 (33%), Positives = 105/183 (57%), Gaps = 5/183 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L AP F+ + Sbjct: 325 RLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLI 384 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNLISV +F+G ++ +A + ITDG DK + T+E + + DFLK Sbjct: 385 SMVTYGDDNLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLK 444 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R FLK + + AP + ++++ L+++ + + + + + V+V+ EL ++ Sbjct: 445 RGFLKRSSVLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTE 500 Query: 528 LME 536 ++E Sbjct: 501 MVE 503 [44][TOP] >UniRef100_P35930 RNA-directed RNA polymerase n=1 Tax=Red clover mottle virus RepID=POL1_RCMV Length = 1864 Score = 114 bits (285), Expect = 5e-24 Identities = 62/183 (33%), Positives = 105/183 (57%), Gaps = 5/183 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A V+++ CG+PSGF LTV+ NS+FNEIL+RY Y+ L AP F+ + Sbjct: 1476 RLAISRDSVWRIECGIPSGFPLTVICNSIFNEILVRYHYKLLLQEHNAPNMYVQSFKNLI 1535 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNLISV +F+G ++ +A + ITDG DK + T+E + + DFLK Sbjct: 1536 SMVTYGDDNLISVNAVVKPYFDGTKLKQAMARNGIIITDGKDKTSATLEFRRLEDCDFLK 1595 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R FLK + + AP + ++++ L+++ + + + + + V+V+ EL ++ Sbjct: 1596 RGFLKRSSVLWDAPEEKASLWAQLHYVNVN----NCEMQVAYMTNLVNVLRELYMHDPTE 1651 Query: 528 LME 536 ++E Sbjct: 1652 MVE 1654 [45][TOP] >UniRef100_UPI000180D482 RNA-dependent RNA polymerase n=1 Tax=Mikania micrantha mosaic virus RepID=UPI000180D482 Length = 474 Score = 112 bits (281), Expect = 2e-23 Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAYR R F V L+ Sbjct: 288 RYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALV 347 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S FNGE + + +TDG DK I + + DFLKR F Sbjct: 348 VYGDDNLISVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNF 407 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 L G P+ +++ L+++ K +++ + V N+N L E Sbjct: 408 KVLPDGEWVGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRE 452 Query: 537 LYLHNDSK 560 L+LH + Sbjct: 453 LWLHGSEE 460 [46][TOP] >UniRef100_B5L2C4 Polyprotein n=1 Tax=Mikania micrantha mosaic virus RepID=B5L2C4_9SECO Length = 1853 Score = 112 bits (281), Expect = 2e-23 Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAYR R F V L+ Sbjct: 1473 RYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAYRMCFADNPMIRESFDTHVALV 1532 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S FNGE + + +TDG DK I + + DFLKR F Sbjct: 1533 VYGDDNLISVSDAISSKFNGEFLVDFFLRLSITVTDGVDKTKQGISFRKLTDCDFLKRNF 1592 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 L G P+ +++ L+++ K +++ + V N+N L E Sbjct: 1593 KVLPDGEWVGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRE 1637 Query: 537 LYLHNDSK 560 L+LH + Sbjct: 1638 LWLHGSEE 1645 [47][TOP] >UniRef100_Q2TCK2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Radish mosaic virus RepID=Q2TCK2_9SECO Length = 709 Score = 112 bits (279), Expect = 3e-23 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V Sbjct: 327 RYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYV 386 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++VYGDDNL+SV+ +F+G+ ++ LA ++ ITDG DK +P ++ + + DFLK Sbjct: 387 SMVVYGDDNLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLK 446 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F + G+ AP + ++++ L+++ + + H K + V V+ EL + Sbjct: 447 RGF--KNRGLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 496 [48][TOP] >UniRef100_C0IQ96 Polyprotein n=1 Tax=Radish mosaic virus RepID=C0IQ96_9SECO Length = 1853 Score = 112 bits (279), Expect = 3e-23 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V Sbjct: 1471 RYAICKNSVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKVPDMVSVSFDEYV 1530 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++VYGDDNL+SV+ +F+G+ ++ LA ++ ITDG DK +P ++ + + DFLK Sbjct: 1531 SMVVYGDDNLLSVSEVIKPYFDGKRLKEFLATLRITITDGKDKTSPFLQFRCLEDCDFLK 1590 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F + G+ AP + ++++ L+++ + + H K + V V+ EL + Sbjct: 1591 RGF--KNRGLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640 [49][TOP] >UniRef100_UPI0000163CFC RNA-dependent RNA polymerase n=1 Tax=Cowpea severe mosaic virus RepID=UPI0000163CFC Length = 712 Score = 111 bits (278), Expect = 4e-23 Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 5/188 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTV 167 RYA +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ P F V Sbjct: 323 RYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFV 382 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNL+SV + F+G ++ L + ITDG DK +P + + + DFLK Sbjct: 383 KMVTYGDDNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLK 442 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F K V P + ++++ L+++T + + H E ++NV Sbjct: 443 RGFKKESDVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNV 487 Query: 528 LMELYLHN 551 + ELYLH+ Sbjct: 488 IRELYLHD 495 [50][TOP] >UniRef100_P36312 RNA-directed RNA polymerase n=1 Tax=Cowpea severe mosaic virus (strain DG) RepID=POL1_CPSMV Length = 1858 Score = 111 bits (278), Expect = 4e-23 Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 5/188 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTV 167 RYA +V++V CG+PSGF LTV+ NS+FNE+L+RY+Y K+ P F V Sbjct: 1469 RYALCKGEVWRVECGIPSGFPLTVICNSIFNELLVRYSYIKICQQARVPATITYGFSTFV 1528 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNL+SV + F+G ++ L + ITDG DK +P + + + DFLK Sbjct: 1529 KMVTYGDDNLLSVQSAITHVFDGTKLKEFLKLNGITITDGKDKTSPVLNFRNLEDCDFLK 1588 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVA 527 R F K V P + ++++ L+++T + + H E ++NV Sbjct: 1589 RGFKKESDVVWVGPEEKESLWAQLHYVTTNNLEKH---------------EAYLVNVVNV 1633 Query: 528 LMELYLHN 551 + ELYLH+ Sbjct: 1634 IRELYLHD 1641 [51][TOP] >UniRef100_D0E0G9 Polyprotein n=1 Tax=Turnip ringspot virus RepID=D0E0G9_9SECO Length = 1860 Score = 111 bits (277), Expect = 5e-23 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V Sbjct: 1473 RYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYV 1532 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLK Sbjct: 1533 GMVTYGDDNLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 1592 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F K +G +P + ++++ L+++ + + H K + V+V+ EL + Sbjct: 1593 RGFKKDRSGFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 1644 [52][TOP] >UniRef100_B9UKJ7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cocoa necrosis virus RepID=B9UKJ7_9SECO Length = 76 Score = 111 bits (277), Expect = 5e-23 Identities = 53/68 (77%), Positives = 61/68 (89%) Frame = +3 Query: 93 NEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKV 272 +EILIRYAY+KLAPKP++ F +VCL+VYGDDNLISV+PS ASWF GEAIRV LAEKK+ Sbjct: 9 HEILIRYAYKKLAPKPQRNLFGVSVCLLVYGDDNLISVSPSIASWFTGEAIRVCLAEKKI 68 Query: 273 KITDGSDK 296 KITDGSDK Sbjct: 69 KITDGSDK 76 [53][TOP] >UniRef100_B2KL92 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Turnip ringspot virus RepID=B2KL92_9SECO Length = 712 Score = 111 bits (277), Expect = 5e-23 Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA V++V CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V Sbjct: 325 RYAICKSTVWRVECGIPSGFPLTVICNSIFNEILIRYSFKAIMREQKVPDLIPISFDKYV 384 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++ YGDDNL+SV+ +F+G+ ++ LA+ KV ITDG DK +P + + + DFLK Sbjct: 385 GMVTYGDDNLLSVSEVVKPFFDGKRLKEFLAKHKVVITDGKDKTSPYLLFRRLEDCDFLK 444 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F K +G +P + ++++ L+++ + + H K + V+V+ EL + Sbjct: 445 RGFKKDRSGFFWNSPEEKESLWAQLHYINVTNLEQHEAYKTNL----VNVLRELYM 496 [54][TOP] >UniRef100_UPI0000231CC7 RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 1 RepID=UPI0000231CC7 Length = 699 Score = 110 bits (276), Expect = 6e-23 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 2/188 (1%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176 RYA G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V ++ Sbjct: 324 RYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMV 383 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S FNG + + +K+TDG DK IE + + DFLKRKF Sbjct: 384 VYGDDNLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKF 443 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 + G + ++ L+++ K V++ E + N N L E Sbjct: 444 KENADGTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRE 488 Query: 537 LYLHNDSK 560 L+L + K Sbjct: 489 LWLGSPEK 496 [55][TOP] >UniRef100_Q76L40 Polyprotein n=1 Tax=Broad bean wilt virus 1 RepID=Q76L40_BBWV1 Length = 1842 Score = 110 bits (276), Expect = 6e-23 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 2/188 (1%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176 RYA G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V ++ Sbjct: 1467 RYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTYVAMV 1526 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S FNG + + +K+TDG DK IE + + DFLKRKF Sbjct: 1527 VYGDDNLISVSEAISSKFNGNFLVNFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKF 1586 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 + G + ++ L+++ K V++ E + N N L E Sbjct: 1587 KENADGTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRE 1631 Query: 537 LYLHNDSK 560 L+L + K Sbjct: 1632 LWLGSPEK 1639 [56][TOP] >UniRef100_Q4W8R6 Polyprotein n=1 Tax=Gentian mosaic virus RepID=Q4W8R6_9SECO Length = 1853 Score = 110 bits (276), Expect = 6e-23 Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 4/194 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YA+R R F V L+ Sbjct: 1473 RYAICEKLLYRVENGIPSGFPLTVIVNSILNEILVKYAFRMCFADNPMVRESFDTHVSLV 1532 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + ++ FNGE + + + +TDG DK I + + DFLKR F Sbjct: 1533 VYGDDNLISVSDAISAKFNGEFLVDFFLKLSITVTDGVDKTKKGISFRRLADCDFLKRGF 1592 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 L G P+ +++ L+++ K +++ + V N+N L E Sbjct: 1593 KNLPDGEWIGPMSRESLWPQLHFVRAKK---------------LEMADAYVANLNNILRE 1637 Query: 537 LYLH--NDSKEFQR 572 L+LH N++ E +R Sbjct: 1638 LWLHSANEATELRR 1651 [57][TOP] >UniRef100_A7M6L1 Polyprotein n=1 Tax=Radish mosaic virus RepID=A7M6L1_9SECO Length = 1853 Score = 110 bits (276), Expect = 6e-23 Identities = 65/176 (36%), Positives = 103/176 (58%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA-----PKPEKCRFQQTV 167 RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V Sbjct: 1471 RYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMIPVSFDEYV 1530 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++VYGDDNL+SV+ +F+G+ ++ LA + ITDG DK +P ++ + + DFLK Sbjct: 1531 SMVVYGDDNLLSVSEVIKPYFDGKRLKDFLATLHITITDGKDKTSPFLQFRRLEDCDFLK 1590 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F + G+ AP D ++++ L+++ + + H K + V V+ EL + Sbjct: 1591 RGF--KNRGLYWDAPEDKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640 [58][TOP] >UniRef100_UPI0000163DDB RNA-dependent RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=UPI0000163DDB Length = 697 Score = 110 bits (275), Expect = 8e-23 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTVVVNS+ NEIL++YAY A P + F V ++ Sbjct: 322 RYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMV 381 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 382 VYGDDNLISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 441 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G + P+ +++ L+++ K +++ E + N N L E Sbjct: 442 KMNPDGTWRCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRE 486 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 487 LWLHDVAEAKEFR 499 [59][TOP] >UniRef100_Q997D0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q997D0_9SECO Length = 1869 Score = 110 bits (275), Expect = 8e-23 Identities = 69/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTVVVNS+ NEIL++YAY A P + F V ++ Sbjct: 1494 RYAMCNRILYRVENGIPSGFPLTVVVNSILNEILVKYAYWHCFADNPTVQSNFDAHVSMV 1553 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 1554 VYGDDNLISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 1613 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G + P+ +++ L+++ K +++ E + N N L E Sbjct: 1614 KMNPDGTWRCPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRE 1658 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 1659 LWLHDVAEAKEFR 1671 [60][TOP] >UniRef100_UPI0000163DD4 RNA-dependent RNA polymerase n=1 Tax=Patchouli mild mosaic virus RepID=UPI0000163DD4 Length = 699 Score = 109 bits (273), Expect = 1e-22 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 324 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 383 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 384 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 443 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 444 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 488 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 489 LWLHDVKEAKEFR 501 [61][TOP] >UniRef100_Q9YM10 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9YM10_9SECO Length = 1870 Score = 109 bits (273), Expect = 1e-22 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 1554 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 1555 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1614 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 1660 LWLHDVKEAKEFR 1672 [62][TOP] >UniRef100_Q9WP48 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WP48_9SECO Length = 1769 Score = 109 bits (273), Expect = 1e-22 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 1394 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPNVQSNFDAHVSMV 1453 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 1454 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1513 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 1514 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1558 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 1559 LWLHDVREAKEFR 1571 [63][TOP] >UniRef100_Q8V978 Polyprotein n=1 Tax=Patchouli mild mosaic virus RepID=Q8V978_9SECO Length = 1870 Score = 109 bits (273), Expect = 1e-22 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 1554 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 1555 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1614 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 1660 LWLHDVKEAKEFR 1672 [64][TOP] >UniRef100_Q3MKX9 Polyprotein 1 n=1 Tax=Broad bean wilt virus 1 RepID=Q3MKX9_BBWV1 Length = 1842 Score = 109 bits (273), Expect = 1e-22 Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 2/188 (1%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR--FQQTVCLI 176 RYA G+ +++V G+PSGF LTV+VNS+ NEILI+YAY K R F V + Sbjct: 1467 RYAICGRVLYRVENGIPSGFPLTVIVNSILNEILIKYAYWKCFETESLIRDHFDTHVAMA 1526 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S FNG + +A +K+TDG DK IE + DFLKR+F Sbjct: 1527 VYGDDNLISVSEAISSRFNGNFLVNFMANLGIKVTDGVDKTKIGIEFRTIENCDFLKRRF 1586 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 + G + ++ L+++ K V++ E + N N L E Sbjct: 1587 KENTDGTWSGVMAEEHLWPQLHFVKAKK---------------VEMSEAYISNCNNILRE 1631 Query: 537 LYLHNDSK 560 L+L + K Sbjct: 1632 LWLEDPGK 1639 [65][TOP] >UniRef100_B8Y619 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Broad bean wilt virus 2 RepID=B8Y619_9SECO Length = 594 Score = 109 bits (273), Expect = 1e-22 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 219 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFGDNPSVQSNFDAHVSMV 278 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 279 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 338 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 339 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILCE 383 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 384 LWLHDVKEAKEFR 396 [66][TOP] >UniRef100_B6ZKN4 RNA1-polyprotein n=1 Tax=Radish mosaic virus RepID=B6ZKN4_9SECO Length = 1853 Score = 108 bits (270), Expect = 3e-22 Identities = 64/176 (36%), Positives = 102/176 (57%), Gaps = 6/176 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA V+KV CG+PSGF LTV+ NS+FNEILIRY+++ + P F + V Sbjct: 1471 RYAICKNTVWKVECGIPSGFPLTVICNSIFNEILIRYSFKAILRSQKIPDMISVSFDEYV 1530 Query: 168 CLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 ++VYGDDNL+SV +F+G+ ++ LA + ITDG DK +P ++ + + DFLK Sbjct: 1531 SMVVYGDDNLLSVNEVIKPYFDGKRLKEFLATLHITITDGKDKTSPFLQFRCLEDCDFLK 1590 Query: 348 RKFLKLDTGVI-QAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVL 512 R F + G+ AP + ++++ L+++ + + H K + V V+ EL + Sbjct: 1591 RGF--KNRGLYWDAPEEKESLWAQLHYVNANNLEKHEAYKTNL----VTVLRELFM 1640 [67][TOP] >UniRef100_Q9WNW0 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q9WNW0_9SECO Length = 1870 Score = 108 bits (269), Expect = 4e-22 Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 1554 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 1555 VYGDDNLISVSDAISSRFDGNFLVSFMEGLGIKVTDGIDKTKVGIEFRRLENCDFLKRSF 1614 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659 Query: 537 LYLHN--DSKEFQ 569 L+LH+ +++EF+ Sbjct: 1660 LWLHDVKEAEEFR 1672 [68][TOP] >UniRef100_Q998P7 Polyprotein n=1 Tax=Broad bean wilt virus 2 RepID=Q998P7_9SECO Length = 1869 Score = 108 bits (269), Expect = 4e-22 Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKP-EKCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 1494 RYAMCNRILYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFVDNPIVQSNFDAHVSMV 1553 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 1554 VYGDDNLISVSDAISSKFDGNFLVKFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 1613 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 1614 KLNPDGTWRSPMSKESLWPQLHYVKAKK---------------LEMAEAYINNCNNILRE 1658 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 1659 LWLHDVIEAKEFR 1671 [69][TOP] >UniRef100_O12662 RNA polymerase n=1 Tax=Broad bean wilt virus 2 RepID=O12662_9SECO Length = 280 Score = 107 bits (268), Expect = 5e-22 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 4/192 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+VNS+ NEIL++YAY P + F V ++ Sbjct: 100 RYAMCNRVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSMV 159 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 VYGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 160 VYGDDNLISVSDAISSKFDGSFLVSFMEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 219 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 220 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 264 Query: 537 LYLHN--DSKEF 566 L+LH+ ++K+F Sbjct: 265 LWLHDVKEAKDF 276 [70][TOP] >UniRef100_Q3YC01 Polyprotein (Fragment) n=1 Tax=Stocky prune virus RepID=Q3YC01_9SECO Length = 795 Score = 107 bits (266), Expect = 9e-22 Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 9/156 (5%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP------EKCRFQQT 164 RYA G+ ++KV+CG+PSGF+LTV+VNS+ NE +R+A++++ + + Sbjct: 427 RYAIAGRNLYKVSCGIPSGFSLTVIVNSLVNEFFLRFAWKRIVRASLGEAFVHRSIMDRE 486 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDG---SDKDAPTIEPKPFWEL 335 V VYGDDNL+SV+ +S +N +I L E+ V + +G ++D P P P Sbjct: 487 VHFAVYGDDNLVSVSDKYSSLYNLVSISSFLRERGVVLKNGQCKDEEDFPPFSPSPS-TC 545 Query: 336 DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKD 443 DFLKR+F+ +G + APLD +++ +W+ S+D Sbjct: 546 DFLKRRFVLGSSGRVLAPLDKSSLLGCAHWVRKSQD 581 [71][TOP] >UniRef100_Q9E933 210kDa protein n=1 Tax=Broad bean wilt virus 2 RepID=Q9E933_9SECO Length = 1870 Score = 102 bits (253), Expect = 3e-20 Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 4/193 (2%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-RKLAPKPE-KCRFQQTVCLI 176 RYA + +++V G+PSGF LTV+ NS+ NEIL++YAY P + F V + Sbjct: 1495 RYAMCNRVLYRVENGIPSGFPLTVIGNSILNEILVKYAYWHCFEDNPSVQSNFDAHVSME 1554 Query: 177 VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF 356 YGDDNLISV+ + +S F+G + + +K+TDG DK IE + DFLKR F Sbjct: 1555 EYGDDNLISVSDAISSKFDGSFLVSFIEGLGIKVTDGIDKTKIGIEFRRLENCDFLKRSF 1614 Query: 357 LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALME 536 G ++P+ +++ L+++ K +++ E + N N L E Sbjct: 1615 KMSPDGTWRSPMSKESLWPQLHFVKAKK---------------LEMAEAYINNCNNILRE 1659 Query: 537 LYLHN--DSKEFQ 569 L+LH+ ++KEF+ Sbjct: 1660 LWLHDVKEAKEFR 1672 [72][TOP] >UniRef100_B6CWG9 Polyprotein n=1 Tax=Tomato torrado virus RepID=B6CWG9_9SECO Length = 2158 Score = 92.0 bits (227), Expect = 3e-17 Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 19/196 (9%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K Sbjct: 1429 YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 1488 Query: 162 TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335 + + VYGDDNL++V P W+ AI L V I +G DK D + + EL Sbjct: 1489 KLFVAVYGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSEL 1547 Query: 336 DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488 FL R F + G +QAPL +I +YW+ PS + T + + + G Sbjct: 1548 TFLSRGFKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP- 1606 Query: 489 DVIEELVLNVNVALME 536 V E+LV +V AL E Sbjct: 1607 QVFEKLVTDVQNALKE 1622 [73][TOP] >UniRef100_UPI000043F357 RNA-dependent RNA polymerase n=1 Tax=Cherry rasp leaf virus RepID=UPI000043F357 Length = 707 Score = 91.7 bits (226), Expect = 4e-17 Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 7/149 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQT 164 RY ++ V G+PSGF LTV+VNS+ N I ++Y KL + E F+Q Sbjct: 332 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQM 391 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 V YGDDNL+SV FN I LAE V + +G+DK+ + P P ++DF Sbjct: 392 VAYATYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDF 451 Query: 342 LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428 LKRKF+ G + APL+ I L+W+ Sbjct: 452 LKRKFVHYQ-GHVVAPLNPVNITERLHWI 479 [74][TOP] >UniRef100_Q6EWG9 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG9_CRLV Length = 2250 Score = 91.7 bits (226), Expect = 4e-17 Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 7/149 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQT 164 RY ++ V G+PSGF LTV+VNS+ N I ++Y KL + E F+Q Sbjct: 1875 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQM 1934 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 V YGDDNL+SV FN I LAE V + +G+DK+ + P P ++DF Sbjct: 1935 VAYATYGDDNLVSVNDVITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDF 1994 Query: 342 LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428 LKRKF+ G + APL+ I L+W+ Sbjct: 1995 LKRKFVHYQ-GHVVAPLNPVNITERLHWI 2022 [75][TOP] >UniRef100_Q5DIW8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q5DIW8_CRLV Length = 2235 Score = 91.7 bits (226), Expect = 4e-17 Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 7/149 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE------KCRFQQT 164 RY ++ V G+PSGF LTV+VNS+ N I ++Y KL + E F+Q Sbjct: 1860 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQM 1919 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 V YGDDNL+SV FN I LAE V + +G+DK+ + P P ++DF Sbjct: 1920 VAYATYGDDNLVSVNDVITERFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDF 1979 Query: 342 LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428 LKRKF+ G + APL+ I L+W+ Sbjct: 1980 LKRKFVHYQ-GHVVAPLNPVNITERLHWI 2007 [76][TOP] >UniRef100_A1XIP9 Polyprotein n=1 Tax=Tomato torrado virus RepID=A1XIP9_9SECO Length = 2158 Score = 91.7 bits (226), Expect = 4e-17 Identities = 68/196 (34%), Positives = 95/196 (48%), Gaps = 19/196 (9%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K Sbjct: 1429 YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 1488 Query: 162 TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335 + + VYGDDNL++V P W+ AI L V I +G DK D + + EL Sbjct: 1489 KLFVAVYGDDNLVAV-PMELHWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSEL 1547 Query: 336 DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488 FL R F + G +QAPL +I +YW+ PS + T + + + G Sbjct: 1548 TFLSRGFKRHRLGYVQAPLKWVSIIEPMYWIRPSVGCPDALAMLENIDTGVREAFHHGP- 1606 Query: 489 DVIEELVLNVNVALME 536 V E+LV +V AL E Sbjct: 1607 QVFEKLVTDVQNALKE 1622 [77][TOP] >UniRef100_UPI0000164A53 RNA-dependent RNA polymerase n=1 Tax=Apple latent spherical virus RepID=UPI0000164A53 Length = 709 Score = 90.1 bits (222), Expect = 1e-16 Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 7/149 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQT 164 RY ++ V G+PSGF LTV+VNS+ N + +AY KL + + K F+ Sbjct: 332 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTL 391 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 V VYGDDNLISV + FN I L E V + +G+DK+ + P P ++DF Sbjct: 392 VSYAVYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDF 451 Query: 342 LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428 LKR+F L G I APL+ I L+W+ Sbjct: 452 LKRRFTTLQ-GHIVAPLNTVNITERLHWV 479 [78][TOP] >UniRef100_Q9JGP2 235K polyprotein n=1 Tax=Apple latent spherical virus RepID=Q9JGP2_9SECO Length = 2079 Score = 90.1 bits (222), Expect = 1e-16 Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 7/149 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-APKPEKC-----RFQQT 164 RY ++ V G+PSGF LTV+VNS+ N + +AY KL + + K F+ Sbjct: 1702 RYGLTNGDLWYVTSGIPSGFPLTVIVNSLVNSFFVHFAYMKLHSSEVHKALYPLYSFRTL 1761 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 V VYGDDNLISV + FN I L E V + +G+DK+ + P P ++DF Sbjct: 1762 VSYAVYGDDNLISVHDTIKDTFNLVTISNLLLEHGVTLKNGADKNEEILSPFYPIEKVDF 1821 Query: 342 LKRKFLKLDTGVIQAPLDMTAIFSSLYWL 428 LKR+F L G I APL+ I L+W+ Sbjct: 1822 LKRRFTTLQ-GHIVAPLNTVNITERLHWV 1849 [79][TOP] >UniRef100_C7EXM2 Polyprotein n=1 Tax=Tomato chocolate spot virus RepID=C7EXM2_9VIRU Length = 2155 Score = 87.4 bits (215), Expect = 7e-16 Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 19/196 (9%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K Sbjct: 1432 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPHDFN 1491 Query: 162 TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335 + + VYGDDNL++V P W++ I L V I +G DK D ++ + EL Sbjct: 1492 QLFVAVYGDDNLVAV-PLHLQWYSLPNIAQELDMVNVVIKNGLDKSMDVNEVQFQDLSEL 1550 Query: 336 DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488 FL R F + G APL +I +YW+ P+ + T + + + G+V Sbjct: 1551 TFLSRGFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDAQAMMENVETGIREAFHHGQV 1610 Query: 489 DVIEELVLNVNVALME 536 E+LV +V AL E Sbjct: 1611 -AYEKLVADVQEALNE 1625 [80][TOP] >UniRef100_A9UC61 Polyprotein n=1 Tax=Tomato marchitez virus RepID=A9UC61_9SECO Length = 2151 Score = 87.4 bits (215), Expect = 7e-16 Identities = 66/197 (33%), Positives = 97/197 (49%), Gaps = 20/197 (10%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQ 158 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P + F Sbjct: 1430 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFN 1489 Query: 159 QTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWE 332 Q + + VYGDDNL++V P W++ I L V I +G DK D ++ + E Sbjct: 1490 Q-LFIAVYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSE 1547 Query: 333 LDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGE 485 L FL R F + G APL +I +YW+ P+ + T + + + G Sbjct: 1548 LTFLSRGFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGR 1607 Query: 486 VDVIEELVLNVNVALME 536 V ++LVL+V AL E Sbjct: 1608 V-AYDKLVLDVQTALDE 1623 [81][TOP] >UniRef100_Q769F2 RNA dependent RNA polymerase (Fragment) n=1 Tax=Satsuma dwarf virus RepID=Q769F2_SDV Length = 374 Score = 87.0 bits (214), Expect = 9e-16 Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 8/190 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164 RY +++++ G PSGFA TV++NSV NE +++++ + A + C F + Sbjct: 22 RYLISDGVLYEIHGGTPSGFAPTVMLNSVVNEFYLKWSWMGIMREAGYAKEASLCAFHEA 81 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 + VYGDDN +SVA AS +N + I L+ VK+ DG+ + TI+P P E+DF Sbjct: 82 TEISVYGDDNFVSVATPVASLYNLKTISEFLSRVGVKLGDGA--KSGTIKPFIPLEEVDF 139 Query: 342 LKRKFL-KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNV 518 LKRKF+ + I PL+ +I L+++ G D I L LN+ Sbjct: 140 LKRKFVADSKSTAILCPLNKRSIEERLFYV----------------RGGQDEIAALELNI 183 Query: 519 NVALMELYLH 548 AL E + H Sbjct: 184 ATALCEAFFH 193 [82][TOP] >UniRef100_A0N0G3 Polyprotein (Fragment) n=1 Tax=Tomato apex necrosis virus RepID=A0N0G3_9VIRU Length = 1943 Score = 85.1 bits (209), Expect = 4e-15 Identities = 65/197 (32%), Positives = 96/197 (48%), Gaps = 20/197 (10%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQ 158 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P + F Sbjct: 1222 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFN 1281 Query: 159 QTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWE 332 Q + + VYGDDNL++V P W++ I L V I +G DK D ++ + E Sbjct: 1282 Q-LFIAVYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSE 1339 Query: 333 LDFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGE 485 L FL R F + G APL +I +YW+ P+ + T + + + G Sbjct: 1340 LTFLSRGFKRHALGYHMAPLKWVSIIEPMYWIRPAPGCPDTQAMMENVETGIREAFHHGR 1399 Query: 486 VDVIEELVLNVNVALME 536 V ++LV +V AL E Sbjct: 1400 V-AYDKLVSDVQTALDE 1415 [83][TOP] >UniRef100_Q20LA1 Polyprotein 1 (Fragment) n=1 Tax=Raspberry ringspot virus RepID=Q20LA1_9SECO Length = 533 Score = 82.4 bits (202), Expect = 2e-14 Identities = 38/71 (53%), Positives = 51/71 (71%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R + G +V++V G+PSGFALTV NS+FNEIL+R AYR L P+ E+ F V LIVY Sbjct: 461 RISICGSQVYRVEAGMPSGFALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVALIVY 520 Query: 183 GDDNLISVAPS 215 GDDN++ + P+ Sbjct: 521 GDDNVMGIHPN 531 [84][TOP] >UniRef100_UPI0000164A61 RNA dependent RNA polymerase n=1 Tax=Strawberry mottle virus RepID=UPI0000164A61 Length = 694 Score = 82.0 bits (201), Expect = 3e-14 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 5/156 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVC 170 R V + +++V G PSGFALTV++NSV N+ + +A+RK+ P R ++ C Sbjct: 327 RRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHC 386 Query: 171 LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 VYGDDN++S + +N I L V ++DG K ++ F ELDFLK Sbjct: 387 TFSVYGDDNVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLK 445 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHT 455 R+++ PL +AI L+W+ S+D T Sbjct: 446 RRWVLYSGQGFLCPLHKSAIEERLFWVRSSEDSVET 481 [85][TOP] >UniRef100_Q8UYV9 Polyprotein n=1 Tax=Strawberry mottle virus RepID=Q8UYV9_9SECO Length = 1915 Score = 82.0 bits (201), Expect = 3e-14 Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 5/156 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA----PKPEKCRFQQTVC 170 R V + +++V G PSGFALTV++NSV N+ + +A+RK+ P R ++ C Sbjct: 1548 RRILVLRDLYQVKGGTPSGFALTVIINSVVNQFYLMWAWRKIMSRIDPGLVPYRVMRSHC 1607 Query: 171 LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 VYGDDN++S + +N I L V ++DG K ++ F ELDFLK Sbjct: 1608 TFSVYGDDNVVSFSLQVKDMYNLVTIAAELKTIGVNLSDGK-KTGNLVKWMEFSELDFLK 1666 Query: 348 RKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHT 455 R+++ PL +AI L+W+ S+D T Sbjct: 1667 RRWVLYSGQGFLCPLHKSAIEERLFWVRSSEDSVET 1702 [86][TOP] >UniRef100_Q1G659 Polyprotein n=2 Tax=Black raspberry necrosis virus RepID=Q1G659_9SECO Length = 2163 Score = 80.5 bits (197), Expect = 9e-14 Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 6/188 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVC 170 R V +++ V G PSGFALTV++NS+ N+ + +A+RK ++P R +T C Sbjct: 1609 RRILVLAELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMSRISPSMVTYRVMRTHC 1668 Query: 171 LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLK 347 VYGDDN++S + + +N I L V ++DG K I+ F +LDFLK Sbjct: 1669 TFSVYGDDNVVSFSLAVRDMYNLCTIADELKTIGVTLSDGK-KTGVLIKWTGFKDLDFLK 1727 Query: 348 RKFLKLDTG-VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNV 524 R++ +L+ G + PLD AI L+W+ S+D +E L N Sbjct: 1728 RRW-ELEPGHGFKCPLDKMAIEERLFWVRKSEDN----------------MESLDDNCYS 1770 Query: 525 ALMELYLH 548 ALME + H Sbjct: 1771 ALMEAFHH 1778 [87][TOP] >UniRef100_Q9YZ97 Polyprotein (Fragment) n=1 Tax=Navel orange infectious mottling virus RepID=Q9YZ97_SDV Length = 872 Score = 79.7 bits (195), Expect = 1e-13 Identities = 65/196 (33%), Positives = 95/196 (48%), Gaps = 6/196 (3%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164 RY V++++ G PSGFA TV++NS+ NE +++++ L A + F + Sbjct: 519 RYLISDGYVYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGLMKEAGYAKEASLYAFHEA 578 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFL 344 + +YGDDN +SVA AS +N + I L VK+ DG+ K T P E+DFL Sbjct: 579 TEISLYGDDNFVSVATPVASLYNLKTISEFLRRIGVKLGDGA-KTGITKPFIPLEEVDFL 637 Query: 345 KRKFLKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNV 524 KR+F+ A TAI L P K K ++ G D + L LN+ Sbjct: 638 KRQFV--------ADAGSTAI------LCPLK-KISIEERLFYVKGGQDELAALELNMAT 682 Query: 525 ALMELYLHNDSKEFQR 572 AL E + H KE+ R Sbjct: 683 ALCEAFFH--GKEYFR 696 [88][TOP] >UniRef100_B4ZF30 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cycas necrotic stunt virus RepID=B4ZF30_CNSV Length = 73 Score = 79.7 bits (195), Expect = 1e-13 Identities = 39/73 (53%), Positives = 50/73 (68%) Frame = +3 Query: 78 VNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTL 257 +NSV NEIL+RY ++ L P++ F V L+VYGDDNL+S A +FNGE I+ TL Sbjct: 1 INSVLNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFNGETIKETL 60 Query: 258 AEKKVKITDGSDK 296 +K V ITDGSDK Sbjct: 61 KKKNVTITDGSDK 73 [89][TOP] >UniRef100_UPI00004FF342 polymerase n=1 Tax=Strawberry latent ringspot virus RepID=UPI00004FF342 Length = 675 Score = 78.6 bits (192), Expect = 3e-13 Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R G +++V+ G+P GFALTV+VNS+ N L+R+++ + F V L V Sbjct: 322 RLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVV 380 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFL 359 GDDNL+SV A FN + + LA + DGSDK+ + E P + DFLKR F Sbjct: 381 GDDNLVSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF- 439 Query: 360 KLDTGVIQAPLDMTAIFSSLYWL 428 K APL ++ SL+W+ Sbjct: 440 KARGDRYLAPLSWLSLSESLHWV 462 [90][TOP] >UniRef100_Q5G2U4 250 kDa polyprotein n=1 Tax=Strawberry latent ringspot virus RepID=Q5G2U4_9SECO Length = 2227 Score = 78.6 bits (192), Expect = 3e-13 Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVY 182 R G +++V+ G+P GFALTV+VNS+ N L+R+++ + F V L V Sbjct: 1874 RLGVAGIGLYRVSGGIPPGFALTVIVNSLVNHFLVRWSWEHMMAS-SSLFFTDCVELAVV 1932 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFL 359 GDDNL+SV A FN + + LA + DGSDK+ + E P + DFLKR F Sbjct: 1933 GDDNLVSVKQVAAEDFNLKKLSAFLAGFGFTLKDGSDKNKEILPEFNPPEKCDFLKRCF- 1991 Query: 360 KLDTGVIQAPLDMTAIFSSLYWL 428 K APL ++ SL+W+ Sbjct: 1992 KARGDRYLAPLSWLSLSESLHWV 2014 [91][TOP] >UniRef100_UPI0000164A59 RNA-dependent RNA polymerase n=1 Tax=Satsuma dwarf virus RepID=UPI0000164A59 Length = 682 Score = 78.2 bits (191), Expect = 4e-13 Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 9/191 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164 RY +++++ G PSGFA TV++NSV NE +++++ L A + F + Sbjct: 330 RYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEA 389 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 + +YGDDN +SVA AS +N I L VK+ DG+ TI+P P E+DF Sbjct: 390 TEISLYGDDNFVSVATPVASVYNLTTISNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDF 447 Query: 342 LKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLN 515 LKR+F+ D+G I PL +I L+++ G D I L LN Sbjct: 448 LKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELN 490 Query: 516 VNVALMELYLH 548 + AL E + H Sbjct: 491 IATALCEAFFH 501 [92][TOP] >UniRef100_Q9WAL8 Polyprotein n=3 Tax=Satsuma dwarf virus RepID=Q9WAL8_SDV Length = 2081 Score = 78.2 bits (191), Expect = 4e-13 Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 9/191 (4%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164 RY +++++ G PSGFA TV++NSV NE +++++ L A + F + Sbjct: 1729 RYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEA 1788 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFWELDF 341 + +YGDDN +SVA AS +N I L VK+ DG+ TI+P P E+DF Sbjct: 1789 TEISLYGDDNFVSVATPVASVYNLTTISNFLGRIGVKLGDGA--KTGTIKPFIPLEEVDF 1846 Query: 342 LKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLN 515 LKR+F+ D+G I PL +I L+++ G D I L LN Sbjct: 1847 LKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------RGGQDEIAALELN 1889 Query: 516 VNVALMELYLH 548 + AL E + H Sbjct: 1890 IATALCEAFFH 1900 [93][TOP] >UniRef100_Q9IJX4 Nonstructural polyprotein n=1 Tax=Cricket paralysis virus RepID=Q9IJX4_CRPV Length = 1771 Score = 77.8 bits (190), Expect = 6e-13 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%) Frame = +3 Query: 18 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVY 182 G V+ PSG TV++N ++N +++R + RKLAP+ + + F++ V +I Y Sbjct: 1559 GDNVYMWTHSQPSGNPFTVIINCLYNSMIMRIVWILLARKLAPEMQSMKKFRENVSMISY 1618 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL- 359 GDDN ++++ WFN I + E K + TD K ++ E+ FLK++F+ Sbjct: 1619 GDDNCLNISDRVVEWFNQITISEQMKEIKHEYTD-EGKTGDMVKFPSLSEIHFLKKRFVF 1677 Query: 360 --KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALM 533 +L V APL I+ L W +D E L++N+N A Sbjct: 1678 SHQLQRTV--APLQKDVIYEMLNWT----------------RNTIDPNEILMMNINTAFR 1719 Query: 534 ELYLHNDSKEFQRVQ 578 E+ H S E+Q+++ Sbjct: 1720 EIVYHGKS-EYQKLR 1733 [94][TOP] >UniRef100_A7KCA2 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-B RepID=A7KCA2_9VIRU Length = 1614 Score = 73.9 bits (180), Expect = 8e-12 Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + +RY Y L P+ F+ V L+ YGDDN++SV+ C WF Sbjct: 1288 PSGNPLTVILNSIVNSLRMRYVYFMLNPEHTVTTFKDNVNLMTYGDDNIMSVSREC-DWF 1346 Query: 231 NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD-TGVIQAPLDMTAI 407 N +I T A + T +DK++ ++ + FLKR + D G APL+ +I Sbjct: 1347 NHTSISETFATLNIVYT-MADKESASVPFINIKDASFLKRTWRMDDQLGCYVAPLEEESI 1405 Query: 408 FSSLYWLTPSK 440 SL T SK Sbjct: 1406 EKSLMVWTRSK 1416 [95][TOP] >UniRef100_Q0EDJ7 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ7_9VIRU Length = 297 Score = 73.2 bits (178), Expect = 1e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [96][TOP] >UniRef100_Q0EDJ3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ3_9VIRU Length = 297 Score = 73.2 bits (178), Expect = 1e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [97][TOP] >UniRef100_UPI0000163DC1 RNA-dependent RNA polymerase n=1 Tax=Maize chlorotic dwarf virus RepID=UPI0000163DC1 Length = 612 Score = 72.8 bits (177), Expect = 2e-11 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 12/194 (6%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQT 164 R V + +F+ G+PSGFA+TV+ NS N + A+ L+P+ F Sbjct: 342 REGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNY 401 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWEL--- 335 ++VYGDDN++SV + ++N + L++ V TD D P + PF E+ Sbjct: 402 CKVVVYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSV 459 Query: 336 DFLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506 FLKR+++ L + + +APLD T+I L+W+ + IE L Sbjct: 460 SFLKRRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEAL 503 Query: 507 VLNVNVALMELYLH 548 N+ AL E +H Sbjct: 504 NQNIESALYEASIH 517 [98][TOP] >UniRef100_O11979 Polyprotein n=2 Tax=Maize chlorotic dwarf virus RepID=O11979_9SECO Length = 3443 Score = 72.8 bits (177), Expect = 2e-11 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 12/194 (6%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQT 164 R V + +F+ G+PSGFA+TV+ NS N + A+ L+P+ F Sbjct: 3173 REGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISHSPLSPQSTVRDFDNY 3232 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWEL--- 335 ++VYGDDN++SV + ++N + L++ V TD D P + PF E+ Sbjct: 3233 CKVVVYGDDNIVSVDLNFLEYYNLRTVAAYLSQFGVTYTD--DAKNPIEKSVPFVEITSV 3290 Query: 336 DFLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506 FLKR+++ L + + +APLD T+I L+W+ + IE L Sbjct: 3291 SFLKRRWVPLGGRLSTIYKAPLDKTSIEERLHWIRECDND----------------IEAL 3334 Query: 507 VLNVNVALMELYLH 548 N+ AL E +H Sbjct: 3335 NQNIESALYEASIH 3348 [99][TOP] >UniRef100_Q8B3M2 Polyprotein n=1 Tax=Deformed wing virus RepID=Q8B3M2_9VIRU Length = 2893 Score = 72.4 bits (176), Expect = 2e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 2815 ANLDKVSVEGTTNW 2828 [100][TOP] >UniRef100_Q7TG18 Polyprotein n=1 Tax=Deformed wing virus RepID=Q7TG18_9VIRU Length = 2893 Score = 72.4 bits (176), Expect = 2e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 2815 ANLDKVSVEGTTNW 2828 [101][TOP] >UniRef100_Q6XMI0 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=Q6XMI0_9VIRU Length = 1566 Score = 72.4 bits (176), Expect = 2e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 1382 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 1440 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 1441 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 1499 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 1500 ANLDKVSVEGTTNW 1513 [102][TOP] >UniRef100_Q0EDK8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK8_9VIRU Length = 297 Score = 72.4 bits (176), Expect = 2e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [103][TOP] >UniRef100_Q0EDI6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI6_9VIRU Length = 297 Score = 72.4 bits (176), Expect = 2e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [104][TOP] >UniRef100_A5A4Z3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Cowpea mosaic virus RepID=A5A4Z3_CPMV Length = 203 Score = 72.4 bits (176), Expect = 2e-11 Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 5/71 (7%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A V++V CG+PSGF +TV+VNS+FNEILIRY Y+KL AP+ F + + Sbjct: 133 RLAICKNTVWRVECGIPSGFPMTVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLM 192 Query: 168 CLIVYGDDNLI 200 L+ YGDDNL+ Sbjct: 193 GLVTYGDDNLV 203 [105][TOP] >UniRef100_A0ZSE7 Polyprotein (Fragment) n=13 Tax=Kakugo virus RepID=A0ZSE7_9VIRU Length = 297 Score = 72.4 bits (176), Expect = 2e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [106][TOP] >UniRef100_UPI0000163D77 RNA-dependent RNA polymerase n=1 Tax=Rice tungro spherical virus RepID=UPI0000163D77 Length = 621 Score = 72.0 bits (175), Expect = 3e-11 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167 R G + + + G+PSGFA+TV+ NS N + A+ L C+ T Sbjct: 353 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 412 Query: 168 CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335 C IV YGDDN++SV +N + + L+ V TDG DK+ P KP+ ++ Sbjct: 413 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 470 Query: 336 DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488 FLKR F ++++ + +APLD T+I L W+ TP + + +++ + + Sbjct: 471 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 529 Query: 489 DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578 D ++LV +N AL + L F+ Q Sbjct: 530 DYFDDLVRRLNSALTRVMLPPTDISFEECQ 559 [107][TOP] >UniRef100_Q98645 ORF1 protein (Fragment) n=1 Tax=Rice tungro spherical virus RepID=Q98645_9SECO Length = 1619 Score = 72.0 bits (175), Expect = 3e-11 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167 R G + + + G+PSGFA+TV+ NS N + A+ L C+ T Sbjct: 1350 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 1409 Query: 168 CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335 C IV YGDDN++SV +N + + L+ V TDG DK+ P KP+ ++ Sbjct: 1410 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 1467 Query: 336 DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488 FLKR F ++++ + +APLD T+I L W+ TP + + +++ + + Sbjct: 1468 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 1526 Query: 489 DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578 D ++LV +N AL + L F+ Q Sbjct: 1527 DYFDDLVQRLNSALKRVMLPPTDISFEECQ 1556 [108][TOP] >UniRef100_Q0EDK3 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK3_9VIRU Length = 297 Score = 72.0 bits (175), Expect = 3e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKISVEGTTNW 275 [109][TOP] >UniRef100_Q0EDI5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDI5_9VIRU Length = 297 Score = 72.0 bits (175), Expect = 3e-11 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGVTDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [110][TOP] >UniRef100_A5A4Z4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Bean pod mottle virus RepID=A5A4Z4_9SECO Length = 197 Score = 72.0 bits (175), Expect = 3e-11 Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 5/71 (7%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 R A + V++V CG+PSGF LTV+ NS+FNE+LIRY+Y KL AP F+ V Sbjct: 127 RMAICKKDVWRVECGIPSGFPLTVICNSIFNEMLIRYSYEKLLRQAKAPSMFLQSFKNFV 186 Query: 168 CLIVYGDDNLI 200 L VYGDDNL+ Sbjct: 187 SLCVYGDDNLV 197 [111][TOP] >UniRef100_Q91PP5 Probable RNA-directed RNA polymerase n=1 Tax=Rice tungro spherical virus (isolate Vt6) RepID=POLG_RTSVT Length = 3471 Score = 72.0 bits (175), Expect = 3e-11 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167 R G + + + G+PSGFA+TV+ NS N + A+ L C+ T Sbjct: 3202 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3261 Query: 168 CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335 C IV YGDDN++SV +N + + L+ V TDG DK+ P KP+ ++ Sbjct: 3262 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3319 Query: 336 DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488 FLKR F ++++ + +APLD T+I L W+ TP + + +++ + + Sbjct: 3320 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3378 Query: 489 DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578 D ++LV +N AL + L F+ Q Sbjct: 3379 DYFDDLVQRLNSALKRVMLPPTDISFEECQ 3408 [112][TOP] >UniRef100_Q83034 Probable RNA-directed RNA polymerase n=2 Tax=Rice tungro spherical virus RepID=POLG_RTSVA Length = 3473 Score = 72.0 bits (175), Expect = 3e-11 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167 R G + + + G+PSGFA+TV+ NS N + A+ L C+ T Sbjct: 3205 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3264 Query: 168 CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335 C IV YGDDN++SV +N + + L+ V TDG DK+ P KP+ ++ Sbjct: 3265 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3322 Query: 336 DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488 FLKR F ++++ + +APLD T+I L W+ TP + + +++ + + Sbjct: 3323 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3381 Query: 489 DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578 D ++LV +N AL + L F+ Q Sbjct: 3382 DYFDDLVRRLNSALTRVMLPPTDISFEECQ 3411 [113][TOP] >UniRef100_Q1MNG5 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG5_9SECO Length = 3471 Score = 71.6 bits (174), Expect = 4e-11 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167 R G + + + G+PSGFA+TV+ NS N + A+ L C+ T Sbjct: 3202 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3261 Query: 168 CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335 C IV YGDDN++SV +N + + L+ V TDG DK+ P KP+ ++ Sbjct: 3262 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3319 Query: 336 DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488 FLKR F ++++ + +APLD T+I L W+ TP + + +++ + + Sbjct: 3320 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3378 Query: 489 DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578 D ++LV +N AL + L F+ Q Sbjct: 3379 DYFDDLVQRLNSALKRVMLPPTDITFEECQ 3408 [114][TOP] >UniRef100_Q1MNG4 Polyprotein n=1 Tax=Rice tungro spherical virus RepID=Q1MNG4_9SECO Length = 3471 Score = 71.6 bits (174), Expect = 4e-11 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAY-----RKLAPKPEKCRFQQTV 167 R G + + + G+PSGFA+TV+ NS N + A+ L C+ T Sbjct: 3202 RDGICGDLILRYSQGMPSGFAMTVIFNSFVNYYFMALAWMSTVGSSLLSPQGSCKDFDTY 3261 Query: 168 CLIV-YGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPF---WEL 335 C IV YGDDN++SV +N + + L+ V TDG DK+ P KP+ ++ Sbjct: 3262 CKIVAYGDDNVVSVHEEFLDVYNLQTVAAYLSHFGVTYTDG-DKN-PIHMSKPYEDITKM 3319 Query: 336 DFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWL----TPSKDKFHTHQKASQYSGEV--- 488 FLKR F ++++ + +APLD T+I L W+ TP + + +++ + + Sbjct: 3320 SFLKRGFERVESSGFLWKAPLDKTSIEERLNWIRDCPTP-VEALEQNIESALHEAAIHGR 3378 Query: 489 DVIEELVLNVNVALMELYLHNDSKEFQRVQ 578 D ++LV +N AL + L F+ Q Sbjct: 3379 DYFDDLVQRLNSALRRVMLPPTDITFEECQ 3408 [115][TOP] >UniRef100_Q0EDJ0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ0_9VIRU Length = 297 Score = 71.6 bits (174), Expect = 4e-11 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T + N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDIXNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [116][TOP] >UniRef100_Q5MH31 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q5MH31_9SECO Length = 3481 Score = 71.2 bits (173), Expect = 5e-11 Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 13/195 (6%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL------APKPEKCRFQQT 164 R V + +F+ G+PSGFA+TV+ NS N + A+ L +P+ F + Sbjct: 3211 REGIVKEYLFQYCQGMPSGFAMTVIFNSFVNYYYLAMAWMNLISSSPLSPQSTLRDFDEY 3270 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGS----DKDAPTIEPKPFWE 332 ++VYGDDN++SV+ ++N + L++ V TD + +K P ++ + Sbjct: 3271 CKVVVYGDDNIVSVSEEFIPYYNLRMVAAYLSQFGVTYTDDAKNPIEKSVPWVDIR---T 3327 Query: 333 LDFLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEE 503 + FLKR++ + + + +APL+ T+I L+W+ D IE Sbjct: 3328 VSFLKRRWTSIGGQLSTIYKAPLETTSIEERLHWIRECDDD----------------IEA 3371 Query: 504 LVLNVNVALMELYLH 548 L N+ AL E +H Sbjct: 3372 LNQNIESALYEASIH 3386 [117][TOP] >UniRef100_Q0EDK9 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK9_9VIRU Length = 297 Score = 71.2 bits (173), Expect = 5e-11 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGXTDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [118][TOP] >UniRef100_Q0EDJ8 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ8_9VIRU Length = 297 Score = 71.2 bits (173), Expect = 5e-11 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K+ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMGFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [119][TOP] >UniRef100_B5LPA0 Polyprotein n=1 Tax=Infectious flacherie virus RepID=B5LPA0_9VIRU Length = 3085 Score = 71.2 bits (173), Expect = 5e-11 Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 5/145 (3%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 VFKVN G+ +G +T VVNSV N IL+ Y + K+A + F + +IV GDD +IS+ Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIA-RRRASEFFKLTYIIVMGDDVVISL 2815 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT-- 371 F+ I A+ +K+TD S+K+ T EPKP F + +FL R F D Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873 Query: 372 GVIQAPLDMTAIFSSLYWLTPSKDK 446 + AP+ A+F W++ +D+ Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898 [120][TOP] >UniRef100_B3F388 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F388_9VIRU Length = 139 Score = 71.2 bits (173), Expect = 5e-11 Identities = 35/77 (45%), Positives = 49/77 (63%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + +RYAY L PK E F++ V L+ YGDDN++SV+P+ A W+ Sbjct: 59 PSGHPLTVIINSLVNSLYMRYAYCLLNPKHEVSSFKENVSLMTYGDDNIMSVSPT-APWY 117 Query: 231 NGEAIRVTLAEKKVKIT 281 N AI A + T Sbjct: 118 NHTAIAAAFATMDITYT 134 [121][TOP] >UniRef100_A0ZSF0 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF0_9VIRU Length = 297 Score = 71.2 bits (173), Expect = 5e-11 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T + Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPLFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [122][TOP] >UniRef100_UPI0000167D17 RNA-dependent RNA polymerase n=1 Tax=Parsnip yellow fleck virus RepID=UPI0000167D17 Length = 813 Score = 70.9 bits (172), Expect = 7e-11 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQT 164 R++ + + +V G PSGF +TV+ NS N ++ A+ LA C F + Sbjct: 350 RFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKY 409 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPF---WE 332 V VYGDDN++++ W+N + + L + V +TDG+ A E KP+ E Sbjct: 410 VRACVYGDDNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILE 467 Query: 333 LDFLKRKFL--KLDTGVIQAPLDMTAIFSSLYWL 428 DFLKR F +L + APL +I +YW+ Sbjct: 468 FDFLKRHFKADELIPSLFHAPLHKRSIEEQVYWI 501 [123][TOP] >UniRef100_A0ZSF1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=A0ZSF1_9VIRU Length = 297 Score = 70.9 bits (172), Expect = 7e-11 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPXFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [124][TOP] >UniRef100_Q05057 Probable RNA-directed RNA polymerase n=1 Tax=Parsnip yellow fleck virus (isolate P-121) RepID=POLG_PYFV1 Length = 3027 Score = 70.9 bits (172), Expect = 7e-11 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQT 164 R++ + + +V G PSGF +TV+ NS N ++ A+ LA C F + Sbjct: 2564 RFSLMKGAILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKY 2623 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPF---WE 332 V VYGDDN++++ W+N + + L + V +TDG+ A E KP+ E Sbjct: 2624 VRACVYGDDNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILE 2681 Query: 333 LDFLKRKFL--KLDTGVIQAPLDMTAIFSSLYWL 428 DFLKR F +L + APL +I +YW+ Sbjct: 2682 FDFLKRHFKADELIPSLFHAPLHKRSIEEQVYWI 2715 [125][TOP] >UniRef100_Q6QLR4 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Venturia canescens picorna-like virus RepID=Q6QLR4_9PICO Length = 514 Score = 70.5 bits (171), Expect = 9e-11 Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 11/151 (7%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK-----PEKCRFQQTVCLIVYGDD 191 VF+ CGLPSG TV NS N + IR A+ +LA + + F + V L+ GDD Sbjct: 328 VFRPTCGLPSGNCETVERNSQTNSLYIRIAFYELAKRYAPVYRDAYWFDKKVRLVTNGDD 387 Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITD----GSDKDAPTIEPKPFWELDFLKRKFL 359 + SV SWFN + E +K+TD G +D +IE E +LKR F+ Sbjct: 388 LIASVKEDVISWFNNRTLIEFFVEYGLKMTDALKSGVVRDYCSIE-----EASYLKRGFV 442 Query: 360 KLDT--GVIQAPLDMTAIFSSLYWLTPSKDK 446 K T G APL+ +I + W+ S DK Sbjct: 443 KHPTREGEWMAPLEEASITDTANWVWRSVDK 473 [126][TOP] >UniRef100_C1K2M4 Protease/RNA-dependent RNA polymerase (Fragment) n=1 Tax=Nasonia vitripennis virus RepID=C1K2M4_9VIRU Length = 787 Score = 70.1 bits (170), Expect = 1e-10 Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 7/147 (4%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAP-KPEKCRFQQTVCLIVYGDD 191 + + N G+PSG A TV+ NS N I IR AY RK AP + F+Q V + GDD Sbjct: 578 IVRFNTGMPSGNAGTVITNSECNSIYIRCAYLGLARKYAPVLADLYWFKQYVRMFSNGDD 637 Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371 +++V P SWFN + ++ +K+TD K E E +LKR F K T Sbjct: 638 LIMAVKPDIISWFNNRTLIDFFSQHNIKMTDAL-KSGKVREFCSLEEATYLKRGFKKHPT 696 Query: 372 --GVIQAPLDMTAIFSSLYWLTPSKDK 446 G APL+ +I + W+ S D+ Sbjct: 697 RPGEWLAPLERASITDTANWIWRSVDR 723 [127][TOP] >UniRef100_Q7TFA5 Polyprotein n=1 Tax=Varroa destructor virus 1 RepID=Q7TFA5_9VIRU Length = 2893 Score = 69.7 bits (169), Expect = 2e-10 Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A++ + P F + V L+ YGDD +++V Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWQGITDLP-LSEFSRHVVLVCYGDDLIMNV 2755 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + FN I + K++ TD DK T+ + FLK FLK T V Sbjct: 2756 SDEMIDKFNAVTIGDFFSRYKMEFTD-QDKSGNTVRWRTLQTATFLKHGFLKHPTRPVFL 2814 Query: 384 APLDMTAIFSSLYW 425 A LD +I + W Sbjct: 2815 ANLDKVSIEGTTNW 2828 [128][TOP] >UniRef100_Q76LW4 Polyprotein n=1 Tax=Kakugo virus RepID=Q76LW4_9VIRU Length = 2893 Score = 69.7 bits (169), Expect = 2e-10 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 2697 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 2755 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ ++ TD DK T++ + FLK FLK T V Sbjct: 2756 SDNMIDKFNAVTIGKFFSQYEMVFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 2814 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 2815 ANLDKVSVEGTTNW 2828 [129][TOP] >UniRef100_Q0EDJ6 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ6_9VIRU Length = 297 Score = 69.7 bits (169), Expect = 2e-10 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD D T++ + FLK FLK T V Sbjct: 203 SDNXIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [130][TOP] >UniRef100_O70710 Polyprotein n=1 Tax=Infectious flacherie virus RepID=O70710_9VIRU Length = 3085 Score = 69.7 bits (169), Expect = 2e-10 Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 5/145 (3%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 VFKVN G+ +G +T VVNSV N IL+ Y + K+ + F + +IV GDD +IS+ Sbjct: 2757 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 2815 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT-- 371 F+ I A+ +K+TD S+K+ T EPKP F + +FL R F D Sbjct: 2816 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 2873 Query: 372 GVIQAPLDMTAIFSSLYWLTPSKDK 446 + AP+ A+F W++ +D+ Sbjct: 2874 DITFAPVKTIALFDCPLWISKGQDE 2898 [131][TOP] >UniRef100_B6UIR8 Polyprotein n=1 Tax=Carrot necrotic dieback virus RepID=B6UIR8_9SECO Length = 3015 Score = 69.7 bits (169), Expect = 2e-10 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 10/157 (6%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK------CRFQQT 164 R++ V V +++ G PSGF +TV+ NS N ++ A+ LA + + F Sbjct: 2555 RFSLVKGGVLRISGGGPSGFPMTVIFNSFINLFYLQSAWIMLASQNGRSDISCPSNFPSF 2614 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEP-KPFWELD 338 V VYGDDN++++ W+N + + L + V +TDG+ A +P + D Sbjct: 2615 VRACVYGDDNIVAIKNEVLPWYNLQTVSKILKDYFGVTMTDGAKNCAENAQPYGKILDFD 2674 Query: 339 FLKRKFL--KLDTGVIQAPLDMTAIFSSLYWLTPSKD 443 FLKR F +L + APL +I +YW+ D Sbjct: 2675 FLKRNFRPDELIPSLFHAPLHKRSIEEQVYWIREGGD 2711 [132][TOP] >UniRef100_A3RKR2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Infectious flacherie virus RepID=A3RKR2_9VIRU Length = 639 Score = 69.7 bits (169), Expect = 2e-10 Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 5/145 (3%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 VFKVN G+ +G +T VVNSV N IL+ Y + K+ + F + +IV GDD +IS+ Sbjct: 311 VFKVNNGVLAGHPMTSVVNSVVNLILMNYMWIKIT-RRRASEFFKLTYIIVMGDDVVISL 369 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKP---FWELDFLKRKFLKLDT-- 371 F+ I A+ +K+TD S+K+ T EPKP F + +FL R F D Sbjct: 370 PKQLTEEFDCRKICAEFAKYDIKVTD-SEKNL-TGEPKPYDSFDKFEFLSRGFSDCDAYP 427 Query: 372 GVIQAPLDMTAIFSSLYWLTPSKDK 446 + AP+ A+F W++ +D+ Sbjct: 428 DITFAPVKTIALFDCPLWISKGQDE 452 [133][TOP] >UniRef100_Q1LZW4 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q1LZW4_9VIRU Length = 2107 Score = 69.3 bits (168), Expect = 2e-10 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 4/138 (2%) Frame = +3 Query: 24 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371 +L SV+ + WFN AI +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHAITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008 Query: 372 GVIQAPLDMTAIFSSLYW 425 I APL I W Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025 [134][TOP] >UniRef100_Q0EDK4 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK4_9VIRU Length = 297 Score = 69.3 bits (168), Expect = 2e-10 Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEXTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A L ++ + W Sbjct: 262 ANLXKVSVEGTTNW 275 [135][TOP] >UniRef100_Q09X76 Nonstructural polyprotein n=1 Tax=Taura syndrome virus RepID=Q09X76_9VIRU Length = 2107 Score = 69.3 bits (168), Expect = 2e-10 Identities = 55/182 (30%), Positives = 78/182 (42%), Gaps = 4/182 (2%) Frame = +3 Query: 24 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVARIFYGDD 1949 Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDQ 2008 Query: 372 GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHN 551 I APL I W + +D + L+ +A E LH Sbjct: 2009 FWI-APLSQNTIEDMCMWSRKN----------------IDAQDALLQTTRIASFEASLHE 2051 Query: 552 DS 557 S Sbjct: 2052 KS 2053 [136][TOP] >UniRef100_Q7LZW0 Polyprotein n=1 Tax=Parsnip yellow fleck virus RepID=Q7LZW0_9SECO Length = 637 Score = 68.9 bits (167), Expect = 3e-10 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 12/146 (8%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLA------PKPEKCRFQQTVCLIVYGD 188 + +V G PSGF +TV+ NS N ++ A+ LA C F + V VYGD Sbjct: 491 ILRVPGGGPSGFPMTVIFNSFINLFYLQSAWIMLARFNGRQDISHPCNFPKYVRACVYGD 550 Query: 189 DNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEPKPF---WELDFLKRKF 356 DN++++ W+N + + L + V +TDG+ A E KP+ E DFLKR F Sbjct: 551 DNIVAIKMEVLPWYNLQTVSEALFDYFGVTMTDGAKNKAS--EAKPYGKILEFDFLKRHF 608 Query: 357 L--KLDTGVIQAPLDMTAIFSSLYWL 428 +L + APL +I +YW+ Sbjct: 609 KADELIPSLFHAPLHKRSIEEQVYWI 634 [137][TOP] >UniRef100_Q0EDJ5 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDJ5_9VIRU Length = 297 Score = 68.9 bits (167), Expect = 3e-10 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLXMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD D T++ + FLK FLK T V Sbjct: 203 SDNXIDKFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [138][TOP] >UniRef100_A6NA62 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Tomato torrado virus RepID=A6NA62_9SECO Length = 216 Score = 68.9 bits (167), Expect = 3e-10 Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 10/127 (7%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K Sbjct: 90 YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 149 Query: 162 TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335 + + VYGDDNL++V P W+ AI L V I +G DK D + + EL Sbjct: 150 KLFVAVYGDDNLVAV-PMELQWYTLPAIAQELEMVNVIIKNGIDKNMDVSSSKMLDLSEL 208 Query: 336 DFLKRKF 356 FL R F Sbjct: 209 TFLSRGF 215 [139][TOP] >UniRef100_A1X599 Polyprotein (Fragment) n=1 Tax=Deformed wing virus RepID=A1X599_9VIRU Length = 205 Score = 68.9 bits (167), Expect = 3e-10 Identities = 40/115 (34%), Positives = 64/115 (55%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P F Q V L+ YGDD +++V Sbjct: 90 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEFSQNVVLVCYGDDLIMNV 148 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371 + + FN I ++ K++ TD DK T++ + FLK FLK T Sbjct: 149 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPT 202 [140][TOP] >UniRef100_Q91NQ2 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q91NQ2_9VIRU Length = 2107 Score = 68.2 bits (165), Expect = 4e-10 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%) Frame = +3 Query: 24 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLSEVTFLKREFVLRDH 2008 Query: 372 GVIQAPLDMTAIFSSLYW 425 I APL I W Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025 [141][TOP] >UniRef100_O36966 Replicase polyprotein n=1 Tax=Drosophila C virus RepID=O36966_9VIRU Length = 1759 Score = 68.2 bits (165), Expect = 4e-10 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 8/184 (4%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCR-FQQTVCLIVYGDDNLISVAPS 215 PSG TV++N ++N I++R ++ K P+ + + F + V LI YGDDN++++ Sbjct: 1558 PSGNPFTVIINCLYNSIIMRLSWIRVMEKFQPRLKSMKWFNEYVALITYGDDNVLNIDAK 1617 Query: 216 CASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL---KLDTGVIQA 386 WFN I + E + + TD + K ++ + ++ FLKRKF +L V A Sbjct: 1618 VVEWFNQINISEVMTEMRHEYTDEA-KTGDIVKSRKLEDIFFLKRKFRFSPELQRHV--A 1674 Query: 387 PLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYLHNDSKEF 566 PL + I+ L W S +D E L+ N+ A E+ H +E+ Sbjct: 1675 PLKIEVIYEMLNWSRRS----------------IDPDEILMSNIETAFREVVYHG-KEEY 1717 Query: 567 QRVQ 578 +++ Sbjct: 1718 DKLR 1721 [142][TOP] >UniRef100_Q5DM98 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q5DM98_9VIRU Length = 2107 Score = 67.8 bits (164), Expect = 6e-10 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%) Frame = +3 Query: 24 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008 Query: 372 GVIQAPLDMTAIFSSLYW 425 I APL I W Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025 [143][TOP] >UniRef100_Q4JFT3 Non-structural polyprotein n=1 Tax=Taura syndrome virus RepID=Q4JFT3_9VIRU Length = 2107 Score = 67.8 bits (164), Expect = 6e-10 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 4/138 (2%) Frame = +3 Query: 24 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDD 191 KVF++N PSG LT ++N V+N I+ RY Y R+ F V I YGDD Sbjct: 1890 KVFQLNHSQPSGNPLTTLINCVYNMIIFRYVYLLAQRENGFPMTLSGFTTNVACIFYGDD 1949 Query: 192 NLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT 371 +L SV+ + WFN I +A + TD + +P + E+ FLKR+F+ D Sbjct: 1950 SLCSVSDKVSEWFNQHVITRLMAATGHEYTDETKSGSPP-PYRSLNEVTFLKREFVLRDH 2008 Query: 372 GVIQAPLDMTAIFSSLYW 425 I APL I W Sbjct: 2009 FWI-APLSRNTIEDMCMW 2025 [144][TOP] >UniRef100_B3F389 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F389_9VIRU Length = 139 Score = 67.8 bits (164), Expect = 6e-10 Identities = 34/77 (44%), Positives = 46/77 (59%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + IRY YR L PK E F+Q V L+ YGDDN++ ++ SWF Sbjct: 59 PSGHPLTVIINSLVNSLYIRYCYRMLNPKKEVITFKQNVNLMTYGDDNIMGISDK-ISWF 117 Query: 231 NGEAIRVTLAEKKVKIT 281 N +I L + T Sbjct: 118 NHTSIADCLGMANIVYT 134 [145][TOP] >UniRef100_Q0EDJ2 Polyprotein (Fragment) n=2 Tax=Kakugo virus RepID=Q0EDJ2_9VIRU Length = 297 Score = 67.4 bits (163), Expect = 8e-10 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V +V CG+PSG T ++N++ N +LIR A+ + P F Q V L+ YGDD ++V Sbjct: 144 VXRVPCGIPSGSPXTDILNTISNCLLIRLAWLGITDXP-LSEFSQNVVLVCYGDDLXMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD D T++ + FLK FLK T V Sbjct: 203 SDNMIDXFNAVTIGKFFSQYKMEFTD-QDXSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A LD ++ + W Sbjct: 262 ANLDKVSVEGTTNW 275 [146][TOP] >UniRef100_UPI0001765C94 RNA-dependent RNA polymerase n=1 Tax=Tomato marchitez virus RepID=UPI0001765C94 Length = 249 Score = 67.0 bits (162), Expect = 1e-09 Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 11/126 (8%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKP---------EKCRFQ 158 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P + F Sbjct: 126 YTLCEDKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAARAIGVKPSDFN 185 Query: 159 QTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWE 332 Q + + VYGDDNL++V P W++ I L V I +G DK D ++ + E Sbjct: 186 Q-LFIAVYGDDNLVAV-PLHLQWYSLPNIAHELELVNVIIKNGLDKSMDVNEVQFQDLSE 243 Query: 333 LDFLKR 350 L FL R Sbjct: 244 LTFLSR 249 [147][TOP] >UniRef100_Q6WGS3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS3_9PICO Length = 151 Score = 67.0 bits (162), Expect = 1e-09 Identities = 36/95 (37%), Positives = 57/95 (60%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 + + N PSG LTV++NS+ N + +RYAY L+P+ + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLSPQKDLLTFKHHVALFTYGDDNICGV 109 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311 + CA +F I+ LAE ++ T +DK+A ++ Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142 [148][TOP] >UniRef100_A7KCA0 Putative uncharacterized protein n=1 Tax=Marine RNA virus JP-A RepID=A7KCA0_9VIRU Length = 1689 Score = 67.0 bits (162), Expect = 1e-09 Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 4/153 (2%) Frame = +3 Query: 36 VNCGL-PSGFALTVVVNSVFNEILIRYAYRKLAPKPE--KCRFQQTVCLIVYGDDNLISV 206 ++CG PSG LTV +N + N +L+R AY + P E F+ ++ YGDD SV Sbjct: 1486 IHCGSNPSGQNLTVYINCIVNSLLLRCAYYHMYPAAEGNPEPFRHNCAVMTYGDDVKGSV 1545 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL-KLDTGVIQ 383 C W+N LAE+ + T + PT + DFLKR L +TG+I Sbjct: 1546 RQEC-DWYNHITYAQFLAERDMVFTMPDKESTPTPYMNDL-DADFLKRHNLYNPETGLIH 1603 Query: 384 APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSG 482 LD +IF SL+ + SK Q A G Sbjct: 1604 GVLDQNSIFKSLHSVLKSKAISAEDQSAQNIDG 1636 [149][TOP] >UniRef100_Q6WGR8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGR8_9PICO Length = 151 Score = 66.6 bits (161), Expect = 1e-09 Identities = 36/95 (37%), Positives = 56/95 (58%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 + + N PSG LTV++NS+ N + +RYAY L P+ + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYALNPQKDLLTFKHRVALFTYGDDNICGV 109 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311 + CA +F I+ LAE ++ T +DK+A ++ Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142 [150][TOP] >UniRef100_Q0EDK2 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK2_9VIRU Length = 297 Score = 66.6 bits (161), Expect = 1e-09 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A L ++ + W Sbjct: 262 ANLXKISVEGTTNW 275 [151][TOP] >UniRef100_Q0EDK1 Polyprotein (Fragment) n=1 Tax=Kakugo virus RepID=Q0EDK1_9VIRU Length = 297 Score = 66.6 bits (161), Expect = 1e-09 Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 1/134 (0%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 V++V CG+PSG +T ++N++ N +LIR A+ + P Q V L+ YGDD +++V Sbjct: 144 VYRVPCGIPSGSPITDILNTISNCLLIRLAWLGITDLP-LSEXSQNVVLVCYGDDLIMNV 202 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLDT-GVIQ 383 + + FN I ++ K++ TD DK T++ + FLK FLK T V Sbjct: 203 SDNMIDKFNAVTIGKFFSQYKMEFTD-QDKSGNTVKWRTLQTATFLKHGFLKHPTRPVFL 261 Query: 384 APLDMTAIFSSLYW 425 A L ++ + W Sbjct: 262 ANLXKXSVEGTTNW 275 [152][TOP] >UniRef100_B3F394 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F394_9VIRU Length = 138 Score = 66.6 bits (161), Expect = 1e-09 Identities = 30/71 (42%), Positives = 47/71 (66%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++N + N + +RY Y KL+P+ F++ V ++ YGDDN++ V+ S A WF Sbjct: 58 PSGHPLTVIINGLANSLYLRYCYAKLSPEANCVNFKRDVAVMTYGDDNIMGVSDS-APWF 116 Query: 231 NGEAIRVTLAE 263 N ++ TLA+ Sbjct: 117 NHTTLQSTLAD 127 [153][TOP] >UniRef100_A5A104 Polyprotein n=1 Tax=Brevicoryne brassicae picorna-like virus RepID=A5A104_9VIRU Length = 2983 Score = 66.6 bits (161), Expect = 1e-09 Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 12/184 (6%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY---RKLAPKPEKCRFQQTVCLIVYGDDNL 197 +++V CGLPSG TV+ NS+ N I IR A+ + + F+ + LI YGDD + Sbjct: 2776 LYEVQCGLPSGNPATVIFNSIVNSIYIRCAWLDVMRNSSYKSLLDFRNNIKLITYGDDLI 2835 Query: 198 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWE-LDFLKRKFL--KLD 368 S+ S + FN ++ + +K TD + K +EP + E FLK F + Sbjct: 2836 ASIDNSVSDKFNNNSLSHFFLKHNIKFTDAA-KTGVNVEPYIYLETATFLKHAFKPHPIR 2894 Query: 369 TGVIQAPLDMTAIFSSLYWLTPSKD-KFHTHQKASQ-----YSGEVDVIEELVLNVNVAL 530 GV A L+ +I W+ S D K T+ Q Y D V ++ A Sbjct: 2895 QGVYLAQLEELSITECANWIRKSPDPKTATYDNCVQGTMLAYGHGPDYYNRYVKKISEAW 2954 Query: 531 MELY 542 E Y Sbjct: 2955 FEKY 2958 [154][TOP] >UniRef100_Q6EEL1 Polyprotein n=1 Tax=Maize chlorotic dwarf virus RepID=Q6EEL1_9SECO Length = 3457 Score = 66.2 bits (160), Expect = 2e-09 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK------LAPKPEKCRFQQT 164 R V + +F+ G+PSGFA+TV+ NS N + A+ L+P+ F + Sbjct: 3187 RRGIVKEYLFQYCQGMPSGFAMTVIFNSFMNYYYLSLAWMNLISASPLSPQASLRYFDEY 3246 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD-- 338 +IVYGDDN+++V ++N + L++ V TD D P + + + +++ Sbjct: 3247 CKVIVYGDDNIVAVNEEFLEYYNLRLVAGYLSQFGVSYTD--DAKNPIEKSERYVKIEDV 3304 Query: 339 -FLKRKFLKLD---TGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506 FLKR+++ L + + +APLD +I L W+ D GE+ L Sbjct: 3305 TFLKRRWVSLGGRASMLYKAPLDKVSIEERLNWIRECDD------------GEL----AL 3348 Query: 507 VLNVNVALMELYLH 548 V N+ AL E +H Sbjct: 3349 VQNIESALYEASIH 3362 [155][TOP] >UniRef100_Q6WGS5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=unidentified picorna-like virus RepID=Q6WGS5_9PICO Length = 151 Score = 65.9 bits (159), Expect = 2e-09 Identities = 36/95 (37%), Positives = 56/95 (58%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 + + N PSG LTV++NS+ N + +RYAY L P+ + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNPQKDLLTFKHHVALFTYGDDNICGV 109 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311 + CA +F I+ LAE ++ T +DK+A ++ Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142 [156][TOP] >UniRef100_B1PM64 Polyprotein (Fragment) n=1 Tax=Tomato torrado virus RepID=B1PM64_9SECO Length = 910 Score = 65.9 bits (159), Expect = 2e-09 Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 19/196 (9%) Frame = +3 Query: 6 YAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE--------KCRFQQ 161 Y KVF++ G+PSGFALTV+ NS+ NE +RYA+ L +P K Sbjct: 181 YTICENKVFRLVGGMPSGFALTVIFNSLLNEFYMRYAFISLLRRPHIAAQAIGCKPSDFN 240 Query: 162 TVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDK--DAPTIEPKPFWEL 335 + + VYGDDNL++V P W+ AI L V I +G DK D + + E Sbjct: 241 KLFVAVYGDDNLVAV-PMELHWYTLPAIAQELEVVNVIIKNGIDKNMDVSSSKMLDLSEP 299 Query: 336 DFLKRKFLKLDTGVIQAPLDMTAIFSSLYWLTPS---------KDKFHTHQKASQYSGEV 488 FL YW+ PS + T + + + G Sbjct: 300 TFLXXXXXXXXXXXXXXXXXXXXXXXXXYWIRPSVGCPDALAMLENIDTGVREAFHHGP- 358 Query: 489 DVIEELVLNVNVALME 536 V E+LV +V AL E Sbjct: 359 QVFEKLVADVQNALKE 374 [157][TOP] >UniRef100_Q6A1M4 Polyprotein (Fragment) n=1 Tax=Squash mosaic virus RepID=Q6A1M4_9SECO Length = 243 Score = 65.5 bits (158), Expect = 3e-09 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 5/63 (7%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL-----APKPEKCRFQQTV 167 RYA +V++V CG+PSGF LTV+ NS+FNEIL+RY YRK+ P+P F + V Sbjct: 180 RYAISKNEVWRVECGIPSGFPLTVICNSIFNEILVRYCYRKILEKNNVPRPLHVNFPRMV 239 Query: 168 CLI 176 L+ Sbjct: 240 KLV 242 [158][TOP] >UniRef100_B3F387 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F387_9VIRU Length = 139 Score = 65.5 bits (158), Expect = 3e-09 Identities = 33/77 (42%), Positives = 47/77 (61%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + +RY Y L PK F++ V L+ YGDDN++ V+P A WF Sbjct: 59 PSGHPLTVIINSIVNSLYMRYCYVMLNPKFTVATFKKHVRLMTYGDDNIMGVSPD-ARWF 117 Query: 231 NGEAIRVTLAEKKVKIT 281 N AI L++ + T Sbjct: 118 NHTAIAKVLSDIDITYT 134 [159][TOP] >UniRef100_Q6A1M5 Polyprotein (Fragment) n=1 Tax=Tobacco ringspot virus RepID=Q6A1M5_TRSV Length = 254 Score = 64.7 bits (156), Expect = 5e-09 Identities = 32/59 (54%), Positives = 41/59 (69%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179 R +VF+V G+PSG ALTV++NSVFNEILIRY Y+ + P PE RF+ V L+V Sbjct: 196 RKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVIPSPEFNRFETFVTLVV 254 [160][TOP] >UniRef100_B3F390 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F390_9VIRU Length = 139 Score = 64.7 bits (156), Expect = 5e-09 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + +RY YR L P E F++ V L+ YGDDN+++V+ SWF Sbjct: 59 PSGHPLTVIINSLANALYMRYCYRILNPAHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117 Query: 231 NGEAIRVTLAEKKVKIT 281 N +I TL E + T Sbjct: 118 NHTSIANTLKEIGITYT 134 [161][TOP] >UniRef100_Q6WGT7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGT7_9PICO Length = 148 Score = 64.3 bits (155), Expect = 6e-09 Identities = 39/96 (40%), Positives = 55/96 (57%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ S WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114 Query: 231 NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD 338 N AI LA V+ T +DK++ ++ PF +D Sbjct: 115 NHTAIVAELANIGVEYT-MADKESKSV---PFIHID 146 [162][TOP] >UniRef100_Q6WGS2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS2_9PICO Length = 148 Score = 64.3 bits (155), Expect = 6e-09 Identities = 39/96 (40%), Positives = 55/96 (57%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ S WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMG---SKQDWF 114 Query: 231 NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD 338 N AI LA V+ T +DK++ ++ PF +D Sbjct: 115 NHTAIVAELANIGVEYT-MADKESKSV---PFIHID 146 [163][TOP] >UniRef100_B3F397 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F397_9VIRU Length = 152 Score = 64.3 bits (155), Expect = 6e-09 Identities = 36/96 (37%), Positives = 57/96 (59%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + +RYAY L P+ E F++ V L+ YGDDN+++V+ + W+ Sbjct: 59 PSGHPLTVIINSLVNSLYMRYAYIILNPEQESASFRKNVALLTYGDDNILTVSRN-IDWY 117 Query: 231 NGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELD 338 N I A+ + T DK+A ++ PF L+ Sbjct: 118 NHTTITQAFADIGLVYT-MPDKEAESV---PFLSLN 149 [164][TOP] >UniRef100_B3F391 RNA-dependent RNA polymerase (Fragment) n=2 Tax=uncultured marine RNA virus RepID=B3F391_9VIRU Length = 139 Score = 64.3 bits (155), Expect = 6e-09 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + +RY YR L P E F++ V L+ YGDDN+++V+ SWF Sbjct: 59 PSGHPLTVIINSLANALYMRYCYRILNPVHECSTFKKNVNLMTYGDDNIMNVSKH-TSWF 117 Query: 231 NGEAIRVTLAEKKVKIT 281 N +I TL E + T Sbjct: 118 NHTSIANTLKEIGITYT 134 [165][TOP] >UniRef100_Q6WGS9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS9_9PICO Length = 148 Score = 63.5 bits (153), Expect = 1e-08 Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 2/89 (2%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV+VNS+ N + +RY Y L P E F++ V L+ YGDDN++ WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENVSLLTYGDDNVMGFK---QDWF 114 Query: 231 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 311 N AI LA V+ T D K P+I Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143 [166][TOP] >UniRef100_Q6A2S5 Polyprotein (Fragment) n=1 Tax=Potato black ringspot virus RepID=Q6A2S5_9SECO Length = 252 Score = 63.5 bits (153), Expect = 1e-08 Identities = 32/59 (54%), Positives = 40/59 (67%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179 R +VF+V G+PSG ALTV++NSVFNEILIRY Y+ + P PE RF+ V L V Sbjct: 194 RKCLARSQVFEVRGGIPSGCALTVLLNSVFNEILIRYVYKTVVPSPEFNRFETFVTLAV 252 [167][TOP] >UniRef100_Q6WGR9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGR9_9PICO Length = 151 Score = 62.0 bits (149), Expect = 3e-08 Identities = 35/95 (36%), Positives = 55/95 (57%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISV 206 + + N PSG LTV++NS+ N + +RYAY L + + F+ V L YGDDN+ V Sbjct: 50 IVQFNGSNPSGHPLTVIINSLANSLYMRYAYYVLNLQKDLLTFKHHVALFTYGDDNICGV 109 Query: 207 APSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI 311 + CA +F I+ LAE ++ T +DK+A ++ Sbjct: 110 SIECA-FFTHTGIQAALAECGIRYT-MADKEAESV 142 [168][TOP] >UniRef100_A4UVR7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Citrus mosaic sadwavirus RepID=A4UVR7_SDV Length = 319 Score = 62.0 bits (149), Expect = 3e-08 Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 3/137 (2%) Frame = +3 Query: 147 CRFQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KP 323 C F + + +YGDDN +SVA + AS +N E I L+ VK+ DG+ + TI+P P Sbjct: 21 CAFHEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIP 78 Query: 324 FWELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVI 497 E+DFLKR+F+ D+G I PL +I L+++ G D + Sbjct: 79 LEEVDFLKRQFI-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDEL 121 Query: 498 EELVLNVNVALMELYLH 548 L LNV AL E + H Sbjct: 122 AALELNVATALCEAFFH 138 [169][TOP] >UniRef100_B3F386 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F386_9VIRU Length = 139 Score = 61.6 bits (148), Expect = 4e-08 Identities = 33/77 (42%), Positives = 44/77 (57%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N I +RY Y L P E F+ V L+ YGDDN+++V+ C W+ Sbjct: 59 PSGNPLTVILNSIVNCIRMRYVYLVLNPDKEVETFKNNVSLMTYGDDNIMTVSEEC-DWY 117 Query: 231 NGEAIRVTLAEKKVKIT 281 N AI E V T Sbjct: 118 NHTAISQAFKESGVVYT 134 [170][TOP] >UniRef100_Q6WGS1 RNA-dependent RNA polymerase (Fragment) n=1 Tax=unidentified picorna-like virus RepID=Q6WGS1_9PICO Length = 148 Score = 61.2 bits (147), Expect = 5e-08 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV+VNS+ N + +RY Y L P E F++ L+ YGDDN++ WF Sbjct: 58 PSGHPLTVIVNSLVNALYMRYCYILLNPAKEATSFKENESLLTYGDDNVMGFK---QDWF 114 Query: 231 NGEAIRVTLAEKKVKIT--DGSDKDAPTI 311 N AI LA V+ T D K P+I Sbjct: 115 NHTAIVAELANIGVEYTMADKESKSVPSI 143 [171][TOP] >UniRef100_Q6A2S6 Polyprotein (Fragment) n=1 Tax=Cherry leaf roll virus RepID=Q6A2S6_9SECO Length = 240 Score = 61.2 bits (147), Expect = 5e-08 Identities = 30/59 (50%), Positives = 41/59 (69%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179 RY+ G +V++V GLPSG A+TV+++S+FNEILIRYAYR + RF V L+V Sbjct: 182 RYSLCGSQVYEVRAGLPSGCAITVIMDSIFNEILIRYAYRVSVGPILRNRFNHFVKLVV 240 [172][TOP] >UniRef100_B3F385 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F385_9VIRU Length = 139 Score = 60.5 bits (145), Expect = 9e-08 Identities = 33/77 (42%), Positives = 44/77 (57%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++N + N + RY Y L P E F+ V L+ YGDDN++ V+P A WF Sbjct: 59 PSGHPLTVIINGLANSLYNRYCYFILNPNSEVHSFKNNVNLMTYGDDNIMGVSPE-APWF 117 Query: 231 NGEAIRVTLAEKKVKIT 281 N AI L++ V T Sbjct: 118 NHTAIADALSKIGVTYT 134 [173][TOP] >UniRef100_Q672I1 Capsid protein n=1 Tax=Sapovirus Hu/Dresden/pJG-Sap01/DE RepID=POLG_SVSAP Length = 2280 Score = 60.5 bits (145), Expect = 9e-08 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 1551 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D SD PT P FLKR F + Sbjct: 1552 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 1605 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630 [174][TOP] >UniRef100_Q9IPD8 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sapovirus Ebt3/1996/JPN RepID=Q9IPD8_9CALI Length = 261 Score = 60.1 bits (144), Expect = 1e-07 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 65 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 124 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D SD PT P FLKR F + Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 178 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203 [175][TOP] >UniRef100_Q6XDK5 Polyprotein n=1 Tax=Sapovirus Mc114 RepID=Q6XDK5_9CALI Length = 2280 Score = 60.1 bits (144), Expect = 1e-07 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 1492 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1551 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D SD PT P FLKR F + Sbjct: 1552 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 1605 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 1606 TPHGV-RALLDITSITRQFYWLKANR 1630 [176][TOP] >UniRef100_Q0PWW7 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Dandelion yellow mosaic virus RepID=Q0PWW7_9VIRU Length = 262 Score = 60.1 bits (144), Expect = 1e-07 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 10/145 (6%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR------FQQT 164 R + V V + G PSGF +TV+ NS N + A+ LA + F++ Sbjct: 118 RLSLVKGAVLSIGGGGPSGFPMTVIFNSYINLFYLMSAWSHLATDNGRVDIQHPSFFKKY 177 Query: 165 VCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEK-KVKITDGSDKDAPTIEP-KPFWELD 338 V VYGDDN++S+ SW+N ++ L + V +TDG +A +P E D Sbjct: 178 VRACVYGDDNIVSIKEEVISWYNLCSVSDFLKKAFGVTMTDGEKNEAHLAKPYGKILEFD 237 Query: 339 FLKRKFL--KLDTGVIQAPLDMTAI 407 FLKR F + APL+ +I Sbjct: 238 FLKRGFFPDSQIPSLFHAPLNKVSI 262 [177][TOP] >UniRef100_Q69014 Capsid protein (Fragment) n=1 Tax=Sapporo virus-Manchester RepID=POLG_SVM93 Length = 2208 Score = 60.1 bits (144), Expect = 1e-07 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 1420 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETIHTY 1479 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D SD PT P FLKR F + Sbjct: 1480 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 1533 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 G I+A LD+T+I YWL ++ Sbjct: 1534 TPHG-IRALLDITSITRQFYWLKANR 1558 [178][TOP] >UniRef100_Q91EJ7 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Lyon/30388/98/F RepID=Q91EJ7_9CALI Length = 827 Score = 59.7 bits (143), Expect = 2e-07 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 39 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 98 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D SD PT P FLKR F + Sbjct: 99 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 152 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 153 TPHGV-RALLDITSITRQFYWLKANR 177 [179][TOP] >UniRef100_O93123 Polyprotein (Fragment) n=1 Tax=Sapporo virus-Houston/86 RepID=O93123_9CALI Length = 853 Score = 59.7 bits (143), Expect = 2e-07 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 65 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 124 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D SD PT P FLKR F + Sbjct: 125 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 178 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 179 TPHGV-RALLDITSITRQFYWLKANR 203 [180][TOP] >UniRef100_O12155 Polymerase and capsid polyprotein (Fragment) n=1 Tax=Sapporo virus-Sapporo RepID=O12155_9CALI Length = 861 Score = 59.7 bits (143), Expect = 2e-07 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 72 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 131 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D SD PT P FLKR F + Sbjct: 132 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSDAIKPTNTPV------FLKRTFTQ 185 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 186 TPHGV-RALLDITSITRQFYWLKANR 210 [181][TOP] >UniRef100_C4PBJ5 Truncated polyprotein (Fragment) n=1 Tax=Sapovirus Hu/697/2005/BGD RepID=C4PBJ5_9CALI Length = 344 Score = 59.7 bits (143), Expect = 2e-07 Identities = 49/146 (33%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I I A + P Q + Y Sbjct: 20 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 79 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D S+ PT P FLKR F + Sbjct: 80 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPTNTPV------FLKRTFTQ 133 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 134 TPHGV-RALLDITSITRQFYWLKANR 158 [182][TOP] >UniRef100_Q2WFL9 Polyprotein (Fragment) n=2 Tax=Sapovirus GI RepID=Q2WFL9_9CALI Length = 358 Score = 59.3 bits (142), Expect = 2e-07 Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T V+NS+ + I I A + P Q + Y Sbjct: 36 YVNDIKFVTRGGLPSGMPFTSVINSINHMIYIAAAILQAYESHNVPYTGNVFQVETIHTY 95 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D S+ PT P FLKR F + Sbjct: 96 GDDCMYSVCPATASIFHAVLANLTSYGLKPTAADKSEAIKPTNTPV------FLKRTFTQ 149 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 150 TPHGV-RALLDITSITRQFYWLKANR 174 [183][TOP] >UniRef100_Q2HWK3 Polyprotein n=1 Tax=Rhizosolenia setigera RNA virus RepID=Q2HWK3_9VIRU Length = 1605 Score = 59.3 bits (142), Expect = 2e-07 Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 10/142 (7%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPS----- 215 PSG LTV NS+ N + R A+RK+ P R++ V L+ YGDD +SV+P Sbjct: 1396 PSGQNLTVYTNSIVNSLYHRCAFRKIYPN-FSGRYRDAVALMTYGDDVKMSVSPKFPDYN 1454 Query: 216 ---CASWFNGEAIRVTLAEKK-VKITDGSDKDAPTIEPKPFWELDF-LKRKFLKLDTGVI 380 S FN + I T+AEK+ + +DA ++ K WE + ++ G+ Sbjct: 1455 HTRIQSEFNKQGIEYTMAEKEAASVPFIQHEDADFLKRKSRWEPSYSYTEGDGTINKGMW 1514 Query: 381 QAPLDMTAIFSSLYWLTPSKDK 446 A LD +IF SL+ SK K Sbjct: 1515 LAMLDEESIFKSLHANLASKVK 1536 [184][TOP] >UniRef100_B3F393 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F393_9VIRU Length = 139 Score = 58.9 bits (141), Expect = 3e-07 Identities = 29/70 (41%), Positives = 42/70 (60%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++NS+ N + IRY+Y P E F+ V LI YGDDN + ++ + WF Sbjct: 59 PSGHPLTVIINSLVNSLYIRYSYYLTNPNQEIDTFKDNVALITYGDDNAMGISNN-VPWF 117 Query: 231 NGEAIRVTLA 260 N +I+ L+ Sbjct: 118 NHTSIQQALS 127 [185][TOP] >UniRef100_Q6A1Z2 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus RepID=Q6A1Z2_ARMV Length = 236 Score = 58.5 bits (140), Expect = 4e-07 Identities = 25/58 (43%), Positives = 40/58 (68%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLI 176 R + G +V++ G+PSG ALTVV+NS+FNE+L+RY ++K+ P + F + V L+ Sbjct: 178 RLSICGNQVYETEAGIPSGCALTVVINSIFNELLMRYCFKKIVPPVYRECFDRCVVLV 235 [186][TOP] >UniRef100_Q27J85 Polyprotein (Fragment) n=1 Tax=Sapovirus Hu/Maizuru/6728/JP RepID=Q27J85_9CALI Length = 366 Score = 58.2 bits (139), Expect = 5e-07 Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 3/146 (2%) Frame = +3 Query: 12 FVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVY 182 +V F GLPSG T VVNS+ + I + A + P Q + Y Sbjct: 31 YVNDIKFVTRGGLPSGMPFTSVVNSINHMIYVAAAILQAYESHNVPYTGNVFQVETVHTY 90 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLK 362 GDD + SV P+ AS F+ +T K D S+ PT P FLKR F + Sbjct: 91 GDDCMYSVCPATASIFHTVLANLTSYGLKPTAADKSEAIKPTNTPV------FLKRTFTQ 144 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSK 440 GV +A LD+T+I YWL ++ Sbjct: 145 TPHGV-RALLDITSITRQFYWLKANR 169 [187][TOP] >UniRef100_Q1L028 Nonstructural protein n=1 Tax=Homalodisca coagulata virus-1 RepID=Q1L028_9VIRU Length = 1795 Score = 58.2 bits (139), Expect = 5e-07 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%) Frame = +3 Query: 48 LPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQ---TVCLIVYGDDNLISVAPSC 218 LPSG LT +VNS++ ++ RY K + + Q + L+ YGDD+++S+ Sbjct: 1589 LPSGHFLTAIVNSLYVNLIFRYLLAKSSKLTSHIQIDQLCRRMKLVSYGDDHIVSIPSGY 1648 Query: 219 ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTGVIQAPLD 395 FN + +E + TD + D E + ++ FLKR F + + APL Sbjct: 1649 EKIFNQSTLPTLFSEIGMTYTDETKSDREVPETRRIEDVTFLKRGFRWEKELNRYVAPLS 1708 Query: 396 MTAIFSSLYWLTPS 437 + + + +W + S Sbjct: 1709 LDTVLETPFWRSKS 1722 [188][TOP] >UniRef100_A4UVR5 RNA-dependent RNA polymerase (Fragment) n=2 Tax=Citrus mosaic sadwavirus RepID=A4UVR5_SDV Length = 319 Score = 58.2 bits (139), Expect = 5e-07 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 3/135 (2%) Frame = +3 Query: 153 FQQTVCLIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEP-KPFW 329 F + + +YGDDN +SVA + AS +N E I L+ VK+ DG+ + TI+P P Sbjct: 23 FYEATEISLYGDDNFVSVATAVASVYNLETISNFLSRVGVKLGDGA--KSGTIKPFIPLE 80 Query: 330 ELDFLKRKFLKLDTG--VIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEE 503 E+DFLKR+F+ D+G I PL +I L+++ G D + Sbjct: 81 EVDFLKRQFV-ADSGSTAILCPLKKISIEERLFYV----------------KGGQDELAA 123 Query: 504 LVLNVNVALMELYLH 548 L LNV AL E + H Sbjct: 124 LELNVATALCEAFFH 138 [189][TOP] >UniRef100_Q27YG9 RNA-directed RNA polymerase n=1 Tax=Nora virus RepID=POLR_NORAV Length = 2104 Score = 55.8 bits (133), Expect(2) = 5e-07 Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 3/145 (2%) Frame = +3 Query: 21 QKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLI 200 Q V+K N G SG T + N + N+I YA+ K ++Q V + +GDD + Sbjct: 1896 QTVYKTNRGNKSGSYTTTIDNCLANDIYGLYAWVKTTGLRSLWDYRQNVSSVAFGDDIIK 1955 Query: 201 SVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFW---ELDFLKRKFLKLDT 371 SV+ +N R L +T GS KD E KPF L FLKR F KL+ Sbjct: 1956 SVSDEYKDKYNYCTYRDVLNATGHIMTPGS-KDG---EEKPFTSFENLQFLKRGF-KLEN 2010 Query: 372 GVIQAPLDMTAIFSSLYWLTPSKDK 446 G++ APL +I W +D+ Sbjct: 2011 GMVLAPLLQRSIEGPFVWTDIREDQ 2035 Score = 21.9 bits (45), Expect(2) = 5e-07 Identities = 7/21 (33%), Positives = 11/21 (52%) Frame = +2 Query: 479 WGG*CYRRACSQCECGIDGTI 541 WG Y C + +CG + T+ Sbjct: 2053 WGEEYYNELCQKLKCGTNRTL 2073 [190][TOP] >UniRef100_Q9DSN9 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q9DSN9_9VIRU Length = 1906 Score = 57.8 bits (138), Expect = 6e-07 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 17/196 (8%) Frame = +3 Query: 18 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPE-----KCR----FQQTVC 170 G V+ + PSG T +N N + +R + + K KC F + V Sbjct: 1693 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKCYVMKDFSKHVS 1752 Query: 171 LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIEPKPFWE 332 ++ YGDDN+I+ + + WFN E I + TD G + + P TIE + Sbjct: 1753 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGKNGEVPKWRTIE-----D 1807 Query: 333 LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506 + +LKRKF + D+ V +APL M I W G +D+ E Sbjct: 1808 VQYLKRKF-RYDSKRKVWEAPLCMDTILEMPNWC----------------RGSLDIQEGT 1850 Query: 507 VLNVNVALMELYLHND 554 +N A+MEL +H + Sbjct: 1851 KVNCENAIMELSMHEE 1866 [191][TOP] >UniRef100_A7LM73 Polyprotein n=1 Tax=Honey bee slow paralysis virus RepID=A7LM73_9VIRU Length = 2964 Score = 57.8 bits (138), Expect = 6e-07 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 6/140 (4%) Frame = +3 Query: 45 GLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDNLISVAP 212 G+ SG +T +NS + I+ A+ R+L K F + ++VYGDD ++SV+ Sbjct: 2771 GIASGSPITAELNSEVGKKYIKLAFLGICRQLNYKYSLNDFNKHCRVVVYGDDLILSVSD 2830 Query: 213 SCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL--KLDTGVIQA 386 + SWFN ++I L +++TD + KD ++ +P + FLKR F +G+ A Sbjct: 2831 AFVSWFNLQSISEYLDNYGIRLTDVT-KDGTIVKYRPLADSSFLKRSFKPHPSRSGIYLA 2889 Query: 387 PLDMTAIFSSLYWLTPSKDK 446 P++ + W D+ Sbjct: 2890 PIEPRSYQECTNWCHKQNDE 2909 [192][TOP] >UniRef100_Q8BDE0 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q8BDE0_9VIRU Length = 1904 Score = 57.4 bits (137), Expect = 8e-07 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 17/196 (8%) Frame = +3 Query: 18 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 170 G V+ + PSG T +N N + +R + + K F + V Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750 Query: 171 LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIEPKPFWE 332 ++ YGDDN+I+ + + WFN E I + TD G++ + P TIE + Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805 Query: 333 LDFLKRKFLKLDT--GVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEEL 506 + +LKRKF + D+ V +APL M I W G +D+ E Sbjct: 1806 VQYLKRKF-RYDSKRKVWEAPLSMDTILEMPNWC----------------RGGLDIQEGT 1848 Query: 507 VLNVNVALMELYLHND 554 +N A+MEL +H + Sbjct: 1849 KVNCENAIMELSMHEE 1864 [193][TOP] >UniRef100_Q5Y975 Nonstructural polyprotein n=1 Tax=Solenopsis invicta virus 1 RepID=Q5Y975_9VIRU Length = 1396 Score = 57.4 bits (137), Expect = 8e-07 Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 17/183 (9%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAY---------------RKLAPKPEKCRFQQTVCLIVYG 185 PSG T +N + N I +R + +K K F+ V LI YG Sbjct: 1188 PSGNPATTPLNCLINSIGLRLCFLRCFEEHKAFFMELMKKFGCKTRMELFRLLVSLISYG 1247 Query: 186 DDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTI-EPKPFWELDFLKRKFL- 359 DDN+I++ P + FN I AE TD + + + + K E+ FLKR F+ Sbjct: 1248 DDNVINIHPLISHLFNMNTITKYFAEFGFTYTDETKQVGKGVPDYKTLEEVSFLKRGFIF 1307 Query: 360 KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539 + APLD+ I + W+ ++D +E +N A+MEL Sbjct: 1308 NEERNCYDAPLDINTILEMINWVRK----------------DLDQVESTKINCENAIMEL 1351 Query: 540 YLH 548 +H Sbjct: 1352 AMH 1354 [194][TOP] >UniRef100_Q8BDE1 Replicase polyprotein n=1 Tax=Acute bee paralysis virus RepID=Q8BDE1_9VIRU Length = 1904 Score = 57.0 bits (136), Expect = 1e-06 Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 16/195 (8%) Frame = +3 Query: 18 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR---------FQQTVC 170 G V+ + PSG T +N N + +R + + K F + V Sbjct: 1691 GDSVYMMTHSQPSGNPATTPLNCFINSMGLRMVFELCSKKYSALNGTKRYVMKDFSKHVS 1750 Query: 171 LIVYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAP---TIEPKPFWE 332 ++ YGDDN+I+ + + WFN E I + TD G++ + P TIE + Sbjct: 1751 IVSYGDDNVINFSDEVSEWFNMETITEAFEKLGFTYTDELKGNNGEVPKWRTIE-----D 1805 Query: 333 LDFLKRKF-LKLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELV 509 + +LKRKF V +APL M I W G +DV E Sbjct: 1806 VQYLKRKFRYDFKRKVWEAPLCMDTILEMPNWC----------------RGGLDVQEGTK 1849 Query: 510 LNVNVALMELYLHND 554 +N A+MEL +H + Sbjct: 1850 VNCENAIMELSMHEE 1864 [195][TOP] >UniRef100_B3F398 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F398_9VIRU Length = 137 Score = 57.0 bits (136), Expect = 1e-06 Identities = 31/77 (40%), Positives = 46/77 (59%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG +LT N + N IL RYA+ + +P+ + RF++ V L+VYGDDN V+ S WF Sbjct: 58 PSGISLTTWTNCIINSILQRYAFFR-SPRSARFRFRECVSLMVYGDDNAAGVS-SEVKWF 115 Query: 231 NGEAIRVTLAEKKVKIT 281 N I +L + ++ T Sbjct: 116 NHTTIATSLQQCGIEYT 132 [196][TOP] >UniRef100_B1A455 Replication-associated polyprotein (Fragment) n=1 Tax=Black raspberry necrosis virus RepID=B1A455_9SECO Length = 983 Score = 56.6 bits (135), Expect = 1e-06 Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 5/100 (5%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRK----LAPKPEKCRFQQTVC 170 R V +++ V G PSGFALTV++NS+ N+ + +A+RK ++P R ++ C Sbjct: 868 RRILVLSELYHVRGGTPSGFALTVIINSMVNQFYLMWAWRKIMARISPSMVTYRIMRSHC 927 Query: 171 LI-VYGDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDG 287 VYGDDN++S + + +N I L V ++DG Sbjct: 928 TFSVYGDDNVVSFSLAVRDMYNLCTIADELKTIGVTLSDG 967 [197][TOP] >UniRef100_B3F392 RNA-dependent RNA polymerase (Fragment) n=1 Tax=uncultured marine RNA virus RepID=B3F392_9VIRU Length = 139 Score = 55.8 bits (133), Expect = 2e-06 Identities = 30/71 (42%), Positives = 41/71 (57%) Frame = +3 Query: 51 PSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIVYGDDNLISVAPSCASWF 230 PSG LTV++N + N + +RYAY L F+ V L+ YGDDN+++V SWF Sbjct: 59 PSGHPLTVIINGLVNSLYMRYAYTVLNEYGHCNDFKSNVNLMTYGDDNILNVNKD-ISWF 117 Query: 231 NGEAIRVTLAE 263 N +I LAE Sbjct: 118 NHTSISQALAE 128 [198][TOP] >UniRef100_B3TZF0 Polymerase polyprotein n=1 Tax=Israel acute paralysis virus of bees RepID=B3TZF0_9VIRU Length = 1950 Score = 55.5 bits (132), Expect = 3e-06 Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 8/185 (4%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAY----RKLAPKPEKCRFQQTVCLIVYGDDN 194 V+ + PSG T +N N + +R + ++ A K F + V ++ YGDDN Sbjct: 1745 VYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICAKEAAVKMTMKDFGKHVSMVSYGDDN 1804 Query: 195 LISVAPSCASWFNGEAIRVTLAEKKVKITD---GSDKDAPTIEPKPFWELDFLKRKF-LK 362 +I+ + W+N E I TD G++ + P + + ++ +LKRKF Sbjct: 1805 VINFSDEVCEWYNMETIAKAFETLGFTYTDELKGANGEVP--KWRSIKDVQYLKRKFRYD 1862 Query: 363 LDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELY 542 V +APL M I W G +D+ E LN A+MEL Sbjct: 1863 EQRKVWEAPLCMDTILEMPNWC----------------RGGLDIQEGTKLNCENAIMELS 1906 Query: 543 LHNDS 557 +H +S Sbjct: 1907 MHEES 1911 [199][TOP] >UniRef100_B2BHW5 Non-structural polyprotein n=1 Tax=Black queen cell virus RepID=B2BHW5_9VIRU Length = 1628 Score = 55.5 bits (132), Expect = 3e-06 Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 14/182 (7%) Frame = +3 Query: 48 LPSGFALTVVVNSVFNEILIRYAYRKLAPK---PEKCRFQQTVCLIVYGDDNLISVAPSC 218 LPSG LT ++NSVF +++ + + PK F + ++ YGDD+++SV Sbjct: 1430 LPSGHYLTAIINSVFVNLVMCLVFMEANPKYSFTTASSFFRECGIVAYGDDHVVSVPEKY 1489 Query: 219 ASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRK-----FLKLDTGVIQ 383 S FN + + V +++ + TIE K E+DFL RK +LK + + Sbjct: 1490 LSVFNQQTLPVLMSKFGMFY---------TIETKDDTEIDFLSRKLEDVSYLKRNFVYDE 1540 Query: 384 ------APLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMELYL 545 APL + I W S+ DV+ + N+ AL EL L Sbjct: 1541 PRQRYIAPLSLDVILEMPMWTKSSR----------------DVVTNVFCNLEHALKELSL 1584 Query: 546 HN 551 H+ Sbjct: 1585 HD 1586 [200][TOP] >UniRef100_Q6A2S7 Polyprotein (Fragment) n=1 Tax=Arracacha virus B RepID=Q6A2S7_9SECO Length = 251 Score = 55.1 bits (131), Expect = 4e-06 Identities = 25/51 (49%), Positives = 33/51 (64%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRF 155 RY G V+KV+ G+PSGF LTV+VNS+ N + +AYRKL + K F Sbjct: 191 RYGIAGLGVYKVSSGIPSGFPLTVIVNSLVNSFFLHFAYRKLMSQSLKSHF 241 [201][TOP] >UniRef100_Q1XEP0 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEP0_9SECO Length = 239 Score = 55.1 bits (131), Expect = 4e-06 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179 R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V Sbjct: 181 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239 [202][TOP] >UniRef100_Q1XEN9 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEN9_9SECO Length = 239 Score = 55.1 bits (131), Expect = 4e-06 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179 R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V Sbjct: 181 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239 [203][TOP] >UniRef100_Q1XEN8 Polyprotein (Fragment) n=1 Tax=Artichoke yellow ringspot virus RepID=Q1XEN8_9SECO Length = 239 Score = 55.1 bits (131), Expect = 4e-06 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = +3 Query: 3 RYAFVGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCRFQQTVCLIV 179 R + G ++V G+PSG ALTV++NS+FNEIL+R Y+ + P + F + V L+V Sbjct: 181 RKSLCGADAYEVRAGIPSGCALTVLLNSIFNEILVRMVYKTVVPGVPRNHFSEYVTLLV 239 [204][TOP] >UniRef100_O36184 Nonstructural polyprotein n=1 Tax=Plautia stali intestine virus RepID=O36184_9VIRU Length = 1811 Score = 54.7 bits (130), Expect = 5e-06 Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Frame = +3 Query: 24 KVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR-----FQQTVCLIVYGD 188 K++ + LPSG LT ++NS+F I + YA+ + K + F ++ YGD Sbjct: 1602 KLYYWSKSLPSGHFLTSIINSIFVNIAMCYAFVESQEKGNRSEENIRVFFNDFSIVTYGD 1661 Query: 189 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF---L 359 D++I V FN + L + T I+ + E+ F+KR F Sbjct: 1662 DHVIGVPEKYVEDFNQLTLPKLLKTLGLDYTMEDKDRICDIKSRKLEEVTFIKRSFRYVK 1721 Query: 360 KLDTGVIQAPLDMTAIFSSLYWLTPSKDKFHTHQKASQYSGEVDVIEELVLNVNVALMEL 539 +LD + APLD+ +I + W Q SGE + + NV+ AL EL Sbjct: 1722 ELDRWL--APLDLNSILDCMNW---------------QRSGEDEGLNAQA-NVSFALKEL 1763 Query: 540 YLH 548 LH Sbjct: 1764 SLH 1766 [205][TOP] >UniRef100_Q8B594 Nonstructural polyprotein n=1 Tax=Aphid lethal paralysis virus RepID=Q8B594_ALPV Length = 2035 Score = 54.3 bits (129), Expect = 7e-06 Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Frame = +3 Query: 27 VFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKL---APKPEKCRFQQTVCLIVYGDDNL 197 ++ V G+PSG T ++NS+ N + ++ + P F + I YGDD + Sbjct: 1821 IYYVRNGIPSGCPATAILNSIVNHCCLADSWLDIMDGTPYATMNSFFEHTSSIFYGDDFI 1880 Query: 198 ISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKF-LKLDTG 374 +++ P +N E + L + K ++ + E+ FLKRKF + G Sbjct: 1881 MNIRPEVIDVYNQETLTPVLKKNLEMTMTDEAKTGECVKARTLEEVSFLKRKFRFESFVG 1940 Query: 375 VIQAPLDMTAIFSSLYWL 428 + AP+D+ I + W+ Sbjct: 1941 LWVAPIDIDVILDAPNWV 1958 [206][TOP] >UniRef100_O56050 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus RepID=O56050_9VIRU Length = 1998 Score = 54.3 bits (129), Expect = 7e-06 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%) Frame = +3 Query: 18 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 188 G ++ V G+PSG +T +NS+ N++ + Y + + P K F + + YGD Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALVYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838 Query: 189 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD 368 D ++++ FN I +++ + K ++ + E++FLKR F + Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897 Query: 369 TGVIQ--APLDMTAIFSSLYW 425 T + + APLD+T I S W Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918 [207][TOP] >UniRef100_A9QXE1 Nonstructural polyprotein n=1 Tax=Rhopalosiphum padi virus RepID=A9QXE1_9VIRU Length = 1998 Score = 54.3 bits (129), Expect = 7e-06 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%) Frame = +3 Query: 18 GQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEK---CRFQQTVCLIVYGD 188 G ++ V G+PSG +T +NS+ N++ + Y + + P K F + + YGD Sbjct: 1779 GSLMYYVRNGIPSGCPVTAPLNSIVNQMALIYCWYHIIDDPLKRNVKEFFEHTSSVFYGD 1838 Query: 189 DNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFLKLD 368 D ++++ FN I +++ + K ++ + E++FLKR F + Sbjct: 1839 DFVMNIRADVLEQFNQITITRAMSDYLDMVMTDEAKTGECVKWRTLPEVNFLKRAF-HYN 1897 Query: 369 TGVIQ--APLDMTAIFSSLYW 425 T + + APLD+T I S W Sbjct: 1898 TFIQEYTAPLDLTVILDSTNW 1918 [208][TOP] >UniRef100_Q9WCE9 Polyprotein n=1 Tax=Sacbrood virus RepID=Q9WCE9_9VIRU Length = 2858 Score = 53.9 bits (128), Expect = 9e-06 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +3 Query: 15 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182 V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y Sbjct: 2651 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 2710 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299 GDD ++SV FN I LA+ + TD + D Sbjct: 2711 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 2749 [209][TOP] >UniRef100_Q994U1 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994U1_9VIRU Length = 174 Score = 53.9 bits (128), Expect = 9e-06 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +3 Query: 15 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182 V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299 GDD ++SV FN I LA+ + TD + D Sbjct: 84 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122 [210][TOP] >UniRef100_Q994T9 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T9_9VIRU Length = 174 Score = 53.9 bits (128), Expect = 9e-06 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +3 Query: 15 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182 V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGNKERGQTWESFKQNVELFCY 83 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299 GDD ++SV FN I LA+ + TD + D Sbjct: 84 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122 [211][TOP] >UniRef100_Q994T5 Polyprotein (Fragment) n=3 Tax=Sacbrood virus RepID=Q994T5_9VIRU Length = 174 Score = 53.9 bits (128), Expect = 9e-06 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +3 Query: 15 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182 V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 83 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299 GDD ++SV FN I LA+ + TD + D Sbjct: 84 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 122 [212][TOP] >UniRef100_Q994T0 Polyprotein (Fragment) n=1 Tax=Sacbrood virus RepID=Q994T0_9VIRU Length = 174 Score = 53.9 bits (128), Expect = 9e-06 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 6/149 (4%) Frame = +3 Query: 15 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182 V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y Sbjct: 24 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSRERGQTWESFKQNVELFCY 83 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKDAPTIEPKPFWELDFLKRKFL- 359 GDD ++SV FN I LA+ + TD ++K + FLK F Sbjct: 84 GDDLIMSVTDKYKDTFNALTISQFLAQYGIVATD-ANKGEEVVAYTTLLNSTFLKHGFRP 142 Query: 360 -KLDTGVIQAPLDMTAIFSSLYWLTPSKD 443 ++ + Q+ L ++I + W+ D Sbjct: 143 HEVYPHLWQSALAWSSINDTTQWIWECAD 171 [213][TOP] >UniRef100_Q80MT3 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Sacbrood virus RepID=Q80MT3_9VIRU Length = 186 Score = 53.9 bits (128), Expect = 9e-06 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +3 Query: 15 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182 V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y Sbjct: 31 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 90 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299 GDD ++SV FN I LA+ + TD + D Sbjct: 91 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 129 [214][TOP] >UniRef100_Q80MT2 RNA-dependent RNA polymerase (Fragment) n=5 Tax=Sacbrood virus RepID=Q80MT2_9VIRU Length = 186 Score = 53.9 bits (128), Expect = 9e-06 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%) Frame = +3 Query: 15 VGQKVFKVNCGLPSGFALTVVVNSVFNEILIRYAYRKLAPKPEKCR----FQQTVCLIVY 182 V +++ CG PSG +TVV+N++ N + I A+ L E+ + F+Q V L Y Sbjct: 28 VSNTLYQQKCGSPSGAPITVVINTLVNILYIFVAWETLVGSKERGQTWESFKQNVELFCY 87 Query: 183 GDDNLISVAPSCASWFNGEAIRVTLAEKKVKITDGSDKD 299 GDD ++SV FN I LA+ + TD + D Sbjct: 88 GDDLIMSVTDKYKDVFNALTISQFLAQYGIVATDANKGD 126