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[1][TOP]
>UniRef100_A2Q4M4 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q4M4_MEDTR
Length = 147
Score = 144 bits (364), Expect = 4e-33
Identities = 72/135 (53%), Positives = 97/135 (71%), Gaps = 2/135 (1%)
Frame = -3
Query: 505 FSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLILKGHSIYHCYAVVI 326
FS YLGL +NT+AE++AIY GL +AR+ G + I+CYSDS+ +D++ K YHCYA I
Sbjct: 10 FSSYLGLSNNTYAEIIAIYQGLHLARNFGCTYIICYSDSKGGIDILAKPVKKYHCYASAI 69
Query: 325 TNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESPPEALKSILLSDALR 146
NI D++ L W++ L HSLREGN SAD+LAK GS+ND K K+ +PPE LK+ILL+D++R
Sbjct: 70 ANIIDLMNLEWEVKLCHSLREGNASADFLAKWGSSNDIKWKLRNTPPEDLKAILLNDSMR 129
Query: 145 --VLHPIA*FSFCLF 107
V + F F LF
Sbjct: 130 TFVFNSFVVFLFLLF 144
[2][TOP]
>UniRef100_A2Q681 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q681_MEDTR
Length = 170
Score = 130 bits (327), Expect = 7e-29
Identities = 65/141 (46%), Positives = 87/141 (61%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
GR GFGGLIR G WI GFS G N EL AI +GL++A DLGF I D ++
Sbjct: 25 GRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYAILNGLQLAWDLGFRIITLEPDYKS 84
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
LDLIL + YH +A+V+ I+ ++ +W + +H+LREGN ADWLAK + +D +K
Sbjct: 85 ALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHTLREGNECADWLAKYDAQSDVSLK 144
Query: 202 IWESPPEALKSILLSDALRVL 140
+W SPP +LL+DA VL
Sbjct: 145 LWVSPPPQFAHVLLADASCVL 165
[3][TOP]
>UniRef100_Q2HTL5 Ribonuclease H (Fragment) n=1 Tax=Medicago truncatula
RepID=Q2HTL5_MEDTR
Length = 233
Score = 116 bits (291), Expect = 1e-24
Identities = 64/143 (44%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYL-GLKDNTFAELMAIYHGLKIARDLGFSSILCYSD 392
T RTG+GG++R S G +I GFSG + D AEL AI+ GLK+ DL + I+CYSD
Sbjct: 87 TPPRTGYGGVLRNSAGLFISGFSGLIPNSADILLAELTAIHQGLKLVTDLNVNEIMCYSD 146
Query: 391 SQTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
S ++LI YH YA +I NI+D+L + +I+L H+LREGN AD+ AK G+ +D
Sbjct: 147 SLLAVNLIANDTPRYHIYAALIQNIKDLLN-DRNISLHHTLREGNQCADFFAKFGANSDA 205
Query: 211 KIKIWESPPEALKSILLSDALRV 143
+ + +SPP L +L +DAL +
Sbjct: 206 ALVVHQSPPADLLPLLRADALGI 228
[4][TOP]
>UniRef100_Q1SMZ7 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q1SMZ7_MEDTR
Length = 438
Score = 115 bits (289), Expect = 2e-24
Identities = 62/141 (43%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYL-GLKDNTFAELMAIYHGLKIARDLGFSSILCYSD 392
T RTG+GG++R S G +I GFSG++ D AEL AI+ L + D + ++CYSD
Sbjct: 292 TPSRTGYGGILRNSAGLFISGFSGFIPNSTDILQAELTAIHQSLHMVIDSNMNDVMCYSD 351
Query: 391 SQTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
S ++LI+ YH YAV+I NI+D+L + +ITL H+LREGN AD+ AKLG+ +D
Sbjct: 352 SLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVR-NITLHHTLREGNQCADFFAKLGANSDV 410
Query: 211 KIKIWESPPEALKSILLSDAL 149
+ + +SPP L +L +DA+
Sbjct: 411 HLVVHQSPPADLLPLLRADAI 431
[5][TOP]
>UniRef100_A4PSD6 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
n=1 Tax=Medicago truncatula RepID=A4PSD6_MEDTR
Length = 869
Score = 113 bits (283), Expect = 9e-24
Identities = 64/141 (45%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = -3
Query: 559 RTGFGGLIRRSDGSWIIGFSGYL-GLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
R GFGGLIR S G ++ GF G+L D AEL AIY G+ A D+G + + YSDS
Sbjct: 726 RAGFGGLIRNSVGFYLSGFLGFLPSSSDILLAELTAIYDGINTAIDMGITDMAVYSDSLL 785
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
++LI S +H +A +I +I+D L L + +L+H+LREGN SAD+LAKLG+ +D +
Sbjct: 786 SINLITTTSSKFHIHAALIQDIRDKLSLR-NFSLNHTLREGNQSADYLAKLGAMSDVNVL 844
Query: 202 IWESPPEALKSILLSDALRVL 140
I +SPP+ L +L +DA L
Sbjct: 845 IHQSPPDELCPLLKNDAAGTL 865
[6][TOP]
>UniRef100_A2Q624 Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q624_MEDTR
Length = 235
Score = 108 bits (269), Expect = 4e-22
Identities = 54/136 (39%), Positives = 85/136 (62%)
Frame = -3
Query: 550 FGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDL 371
FGGLIR S++ GF G E+ +YHGLK+ D+G ++C+SDS TV+DL
Sbjct: 95 FGGLIRDHTSSFLHGFFGKNSRPCILHVEISGLYHGLKLCWDIGIKHVVCHSDSTTVVDL 154
Query: 370 ILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWES 191
+ K +++H Y +I I+ +L+ +W ++L H+L EGN +AD+LAK G+ +DT + I
Sbjct: 155 VQKDLNVHHKYGNLIMAIKKLLRRDWVVSLRHTLCEGNAAADFLAKKGALSDTSLVILNE 214
Query: 190 PPEALKSILLSDALRV 143
P + +LL+DA+ V
Sbjct: 215 APPDIAFVLLADAVGV 230
[7][TOP]
>UniRef100_Q2HUI8 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HUI8_MEDTR
Length = 208
Score = 107 bits (268), Expect = 5e-22
Identities = 60/145 (41%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
Frame = -3
Query: 559 RTGFGGLIRRSDGSWIIGFSGYLG-LKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
R G+GG+IR S G ++ FSG++ D AEL AI+ G IA D+G + + CYSDS
Sbjct: 65 RAGYGGIIRNSAGLYLSCFSGFIADSTDILLAELTAIHRGFSIASDMGVNEMACYSDSLL 124
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
++LI S YH YAV+I +I+D+L + + ++ H LREGN AD++AK G++++
Sbjct: 125 SINLITGQASKYHAYAVLIQDIKDLLS-SHNFSIQHCLREGNQCADFMAKFGASSNNVCF 183
Query: 202 IWESPPEALKSILLSDALRVLHPIA 128
I SPP+ L +L +DA+ P A
Sbjct: 184 IHPSPPQDLHVLLRNDAIGTCFPRA 208
[8][TOP]
>UniRef100_Q2HUN6 RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
n=1 Tax=Medicago truncatula RepID=Q2HUN6_MEDTR
Length = 1296
Score = 102 bits (254), Expect = 2e-20
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = -3
Query: 559 RTGFGGLIRRSDGSWIIGFSGYLGLK-DNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
R GFGG+ R + G ++ G+SG++ D AEL A++ GL +A ++G + CYSDS
Sbjct: 1153 RAGFGGIFRNNVGGYLSGYSGFISESTDILLAELTALHQGLIMAAEMGIEELACYSDSLL 1212
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
++LI + S YH YAV+I +I+D+L + + ++ H REGN AD+LAKLG++++ +
Sbjct: 1213 TINLITRTTSKYHTYAVLIQDIKDLLSAH-NFSVYHCFREGNQCADYLAKLGASSNEECL 1271
Query: 202 IWESPPEALKSILLSDALRVLHP 134
+ S + L ++ DA+ L P
Sbjct: 1272 VHASACQELLVLIQMDAIGTLFP 1294
[9][TOP]
>UniRef100_Q2HRG4 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HRG4_MEDTR
Length = 1378
Score = 92.8 bits (229), Expect = 2e-17
Identities = 50/140 (35%), Positives = 77/140 (55%)
Frame = -3
Query: 553 GFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLD 374
G+GGL R DG+W+ GF G LG AEL AI GL A D G+ +IL +D +
Sbjct: 1199 GYGGLFRDVDGNWLGGFYGSLGFTTKMKAELYAICQGLITAWDFGYRNILVETDYLEAIK 1258
Query: 373 LILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWE 194
I + + + Y ++ +I+ +++ NW + L HSL+E N AD L+++G+
Sbjct: 1259 HIEEANIEHDAYGSLVADIRSLMQRNWSLNLDHSLKEDNACADILSRIGAEQHEVYCFHA 1318
Query: 193 SPPEALKSILLSDALRVLHP 134
PP+ L+ L++DAL V P
Sbjct: 1319 YPPQQLQLALMADALHVQLP 1338
[10][TOP]
>UniRef100_B9N0S8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N0S8_POPTR
Length = 244
Score = 90.5 bits (223), Expect = 8e-17
Identities = 48/141 (34%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
S ++ G+ R G W+ GFS + + AEL+A+ LK+A D G ++ SDS+
Sbjct: 71 SSKSSIAGVCRDEHGIWLFGFSCRVKSESAFEAELLAVREALKLAWDKGLKKVILESDSE 130
Query: 385 TVLDLILKG--HSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
V+ I + + VI Q + +WD + H+LREGNF+AD L K+G +
Sbjct: 131 NVVKRIRNQVTRQPKNQFEAVILECQAYVNRDWDCFIQHTLREGNFAADALTKIGISESF 190
Query: 211 KIKIWESPPEALKSILLSDAL 149
++ +W+ PPE+L ILL+D +
Sbjct: 191 ELHVWKHPPESLSLILLADKI 211
[11][TOP]
>UniRef100_Q2PEU3 Putative uncharacterized protein n=1 Tax=Trifolium pratense
RepID=Q2PEU3_TRIPR
Length = 553
Score = 89.4 bits (220), Expect = 2e-16
Identities = 51/142 (35%), Positives = 77/142 (54%)
Frame = -3
Query: 559 RTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTV 380
R G GG+IR S G W+ GF+ LG AEL + GL AR LGF+++ DS V
Sbjct: 407 RGGCGGIIRGSQGEWLGGFARGLGNCSAIIAELWGVAEGLSYARRLGFTAVELNVDSVVV 466
Query: 379 LDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKI 200
+ I G ++ +I+ ML L+W+I + H+ RE N AD +A +G D +
Sbjct: 467 VQAIKTGRFSSSVGLPLVKHIRRMLDLDWEIKIEHAYRESNKCADAMANIGCHLDRETIF 526
Query: 199 WESPPEALKSILLSDALRVLHP 134
++S P ++K +LL+D L + P
Sbjct: 527 YDSCPISIKELLLADELGITTP 548
[12][TOP]
>UniRef100_B9HMY3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HMY3_POPTR
Length = 227
Score = 89.0 bits (219), Expect = 2e-16
Identities = 46/120 (38%), Positives = 68/120 (56%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
S + G GGL+R ++G W++GFS G N EL+ I HGL +A + G+ I+C DS
Sbjct: 98 SRKIGLGGLVRDNEGKWLVGFSSIGGFDTNLLPELLDIKHGLVLAWNQGYRKIICNLDSI 157
Query: 385 TVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKI 206
I G+ I+ VVI + + +L W++ L H LRE N AD++AK G+ N +I
Sbjct: 158 NASRRIHDGNFIFQKLGVVIVDTKKLLSREWEVHLLHLLREANSCADFMAKHGARNLAEI 217
[13][TOP]
>UniRef100_Q2HU20 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HU20_MEDTR
Length = 220
Score = 86.7 bits (213), Expect = 1e-15
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Frame = -3
Query: 553 GFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLD 374
G GGL R DG WI G++ +G D AE+ +Y GL +A +S ++ SDS+ ++D
Sbjct: 76 GCGGLFRDLDGRWIKGYTKKIGACDALHAEMWGLYLGLDMAWREHYSHLIVESDSKILID 135
Query: 373 LILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLG-SANDTKIKIW 197
+I V++ I+ +LK +W++ L+H+ REGN SADWLA L S +
Sbjct: 136 MISDNFKFNGNIPVLVYRIRKLLKTSWNVQLNHTWREGNRSADWLANLSISTYHFNFIVL 195
Query: 196 ESPPEALKSILL 161
ESPP +K L
Sbjct: 196 ESPPCEVKESFL 207
[14][TOP]
>UniRef100_B9HFN7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HFN7_POPTR
Length = 245
Score = 84.7 bits (208), Expect = 4e-15
Identities = 55/146 (37%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G G GG+IR G+WI GF+ +G+ + AEL A+Y GL++A D GF + SDS+
Sbjct: 97 GVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKV 156
Query: 382 VLDLILKGHSI-----YHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSAN 218
V+ LI G S+ Y+ +I I+ ML +W++T H RE N ADWLA G
Sbjct: 157 VVGLI-NGDSVRVDRNYN----IIMQIKGMLGRDWEVTTYHVYREANCVADWLANYGLTR 211
Query: 217 DTKIK---IWESPPEALKSILLSDAL 149
D + + E PP L +L D +
Sbjct: 212 DLLDRGSDVLEEPPSGLYPLLYYDLI 237
[15][TOP]
>UniRef100_B9IKN0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IKN0_POPTR
Length = 245
Score = 84.3 bits (207), Expect = 6e-15
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G G GG+IR G+WI GF+ + + + AEL A+Y GL++A D GF + SDS+
Sbjct: 97 GVAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKV 156
Query: 382 VLDLILKGHSI-----YHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSAN 218
V+ LI G S+ Y+ +I I+DML +W++T H RE N ADWLA G +
Sbjct: 157 VVGLI-NGDSVRVDRNYN----IIMQIKDMLGRDWEVTTYHVYREANCVADWLANYGLSR 211
Query: 217 DTKIK---IWESPPEALKSILLSDAL 149
D + + E PP L + D +
Sbjct: 212 DLLDRGSDVLEEPPSGLYPLFYYDLI 237
[16][TOP]
>UniRef100_Q2HX37 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
the S14 site n=1 Tax=Ipomoea batatas RepID=Q2HX37_IPOBA
Length = 1366
Score = 84.0 bits (206), Expect = 7e-15
Identities = 42/133 (31%), Positives = 79/133 (59%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GGL+R +G W+ G++ +G ++ AEL + GL +A++ GF+ ++ +DS+ V+ ++
Sbjct: 1226 GGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1285
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
K + ++++ + + +L +I ++H LREGN AD+LA LG ++ I E P
Sbjct: 1286 RKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSWGTTILERP 1345
Query: 187 PEALKSILLSDAL 149
P+ L+ L DA+
Sbjct: 1346 PDDLRIFLQRDAI 1358
[17][TOP]
>UniRef100_Q2HX35 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
the S11 site n=1 Tax=Ipomoea batatas RepID=Q2HX35_IPOBA
Length = 1898
Score = 84.0 bits (206), Expect = 7e-15
Identities = 42/133 (31%), Positives = 79/133 (59%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GGL+R +G W+ G++ +G ++ AEL + GL +A++ GF+ ++ +DS+ V+ ++
Sbjct: 1758 GGLLRNENGLWVAGYTCNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1817
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
K + ++++ + + +L +I ++H LREGN AD+LA LG ++ I E P
Sbjct: 1818 RKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSWGTTILERP 1877
Query: 187 PEALKSILLSDAL 149
P+ L+ L DA+
Sbjct: 1878 PDDLRIFLQRDAI 1890
[18][TOP]
>UniRef100_Q2HX34 LINE-type retrotransposon LIb DNA, complete sequence, Insertion at
the SCL6 site n=1 Tax=Ipomoea batatas RepID=Q2HX34_IPOBA
Length = 1366
Score = 82.8 bits (203), Expect = 2e-14
Identities = 42/133 (31%), Positives = 78/133 (58%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GGL+R +G W+ G+ +G ++ AEL + GL +A++ GF+ ++ +DS+ V+ ++
Sbjct: 1226 GGLLRNENGLWVAGYICNIGTANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVVQVL 1285
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
K + ++++ + + +L +I ++H LREGN AD+LA LG ++ I E P
Sbjct: 1286 RKDGPVTPDASILVKDCKLLLDHFQEIKVTHILREGNQCADFLANLGQSSSWGTTILERP 1345
Query: 187 PEALKSILLSDAL 149
P+ L+ L DA+
Sbjct: 1346 PDDLRIFLQRDAI 1358
[19][TOP]
>UniRef100_B9HV70 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HV70_POPTR
Length = 245
Score = 82.8 bits (203), Expect = 2e-14
Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 8/146 (5%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G G GG+IR G+WI GF+ +G+ + AEL A+Y GL++A D GF + SDS+
Sbjct: 97 GVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKV 156
Query: 382 VLDLILKGHSI-----YHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSAN 218
V+ LI G S+ Y+ +I I+ ML NW++T H RE N ADWLA G
Sbjct: 157 VVGLI-NGDSVRVDRNYN----IIMQIKGMLGRNWEVTTYHVYREANCVADWLANYGLTR 211
Query: 217 DTKIK---IWESPPEALKSILLSDAL 149
D + + E P L +L D +
Sbjct: 212 DLLDRGSDVLEELPSGLYPLLYYDLI 237
[20][TOP]
>UniRef100_A2Q568 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=A2Q568_MEDTR
Length = 275
Score = 79.7 bits (195), Expect = 1e-13
Identities = 45/138 (32%), Positives = 72/138 (52%)
Frame = -3
Query: 556 TGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVL 377
TG GGL R ++G WI GFS L + +EL ++ GL+IAR+ GFS + + DS
Sbjct: 147 TGSGGLFRNAEGKWISGFSHNLSRCNAYLSELCGVFDGLQIARERGFSKVELHVDS---- 202
Query: 376 DLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIW 197
+VV+ +Q +W++ + HS RE N AD LA + + ++++
Sbjct: 203 -------------SVVVWTLQTTKDGSWEVKICHSYREVNSCADTLANMDCEHAPGLRVY 249
Query: 196 ESPPEALKSILLSDALRV 143
E P L S+LL+D + +
Sbjct: 250 EQCPARLSSMLLADVMGI 267
[21][TOP]
>UniRef100_Q9SJZ8 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=Q9SJZ8_ARATH
Length = 321
Score = 77.8 bits (190), Expect = 5e-13
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Frame = -3
Query: 562 GRTGF---GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSD 392
G GF GG++R +G+WI GF+ +G+ AEL +Y+GL IA G + D
Sbjct: 171 GNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVD 230
Query: 391 SQTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
S+ V+ + G + H + ++ D L W + +SH RE N AD LA +
Sbjct: 231 SKMVVGFLTTGIADSHPLSFLLRLCYDFLSKGWIVRISHVYREANRLADGLANYAFSLSL 290
Query: 211 KIKIWESPPEALKSILLSDALRVLHP 134
+ + ES P+ + SILL D V +P
Sbjct: 291 GLHLLESRPDVVSSILLDDVAGVSYP 316
[22][TOP]
>UniRef100_Q2HVF1 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=Q2HVF1_MEDTR
Length = 126
Score = 77.8 bits (190), Expect = 5e-13
Identities = 37/103 (35%), Positives = 66/103 (64%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
SG+ +GGLIR+ DGS++ G G +G+ + AE+ + G+K+ + G+ ++C+ DS
Sbjct: 24 SGKANYGGLIRKHDGSFLRGLFGSVGISNILHAEIQTLI-GIKLCWETGYRKLMCFFDSI 82
Query: 385 TVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGN 257
V++L++K S +H YA ++ IQ+ L +W I++ H L +GN
Sbjct: 83 HVVELVMKDISRFHHYANLLELIQNYLDKDWFISIQHILWDGN 125
[23][TOP]
>UniRef100_B9MXX8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MXX8_POPTR
Length = 248
Score = 75.5 bits (184), Expect = 3e-12
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Frame = -3
Query: 559 RTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTV 380
++ G+ R G W+ GFS + AEL+A+ LK+A D G ++ SDS++V
Sbjct: 77 KSSVAGVCRDEHGIWLFGFSSRVKSGSAFEAELLAVREALKLAWDKGLKRVIVESDSESV 136
Query: 379 LDLILKG--HSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKI 206
++ I + VI Q + W+ L H+ REGNF+AD L K+ + ++
Sbjct: 137 VNRIRNQLTRQPKNQIEAVILECQSYVSREWNCFLQHTHREGNFAADALTKIIISESFEL 196
Query: 205 KIWESPPEALKSILLSDALRVLHP 134
++ PP++L ILL+D + + P
Sbjct: 197 HVFNHPPKSLSLILLADKIGMAVP 220
[24][TOP]
>UniRef100_Q9FG26 Non-LTR retroelement reverse transcriptase-like n=1 Tax=Arabidopsis
thaliana RepID=Q9FG26_ARATH
Length = 676
Score = 75.1 bits (183), Expect = 3e-12
Identities = 43/143 (30%), Positives = 69/143 (48%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G+ GG+IR GSW++GF+ +G+ AEL +Y+GL +A + G+ + DS
Sbjct: 529 GQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSAL 588
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
V+ + G H A ++ + +W + ++H RE N AD LA
Sbjct: 589 VVGFLQSGIGDSHPLAFLVRLCHGFISKDWIVRITHVYREANRLADGLANYAFTLPFGFL 648
Query: 202 IWESPPEALKSILLSDALRVLHP 134
+ +S PE + SILL D + P
Sbjct: 649 LLDSCPEHVSSILLEDVMGTSFP 671
[25][TOP]
>UniRef100_Q9LQJ0 F28G4.15 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LQJ0_ARATH
Length = 272
Score = 72.4 bits (176), Expect = 2e-11
Identities = 41/138 (29%), Positives = 66/138 (47%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG++R DG+W GFS +G+ AEL Y+GL IA + G + + DS+ V+ +
Sbjct: 130 GGVVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFL 189
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
G H + ++ +L +W + +SH RE N AD LA ++ S
Sbjct: 190 RTGIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLADGLANYAFFLPLGFHLFNST 249
Query: 187 PEALKSILLSDALRVLHP 134
P+ + SI+ D +P
Sbjct: 250 PDIVMSIVHDDVAGSAYP 267
[26][TOP]
>UniRef100_Q9LNS0 F1L3.4 n=1 Tax=Arabidopsis thaliana RepID=Q9LNS0_ARATH
Length = 253
Score = 72.4 bits (176), Expect = 2e-11
Identities = 41/138 (29%), Positives = 66/138 (47%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG++R DG+W GFS +G+ AEL Y+GL IA + G + + DS+ V+ +
Sbjct: 111 GGVVRDGDGNWCYGFSLNIGICSAPLAELWGAYYGLNIAWERGVTQLEMEIDSEMVVGFL 170
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
G H + ++ +L +W + +SH RE N AD LA ++ S
Sbjct: 171 RTGIDDSHPLSFLVRLCHGLLSKDWSVRISHVYREANRLADGLANYAFFLPLGFHLFNST 230
Query: 187 PEALKSILLSDALRVLHP 134
P+ + SI+ D +P
Sbjct: 231 PDIVMSIVHDDVAGSAYP 248
[27][TOP]
>UniRef100_Q2HRT1 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=Q2HRT1_MEDTR
Length = 151
Score = 72.4 bits (176), Expect = 2e-11
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = -3
Query: 559 RTGFGGLIRRSDGSWIIGFSGYLG-LKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
R G+GG+ R S ++ GFSGYL D EL AI+HG+ +A DLG ++C+SDS
Sbjct: 64 RAGYGGIFRNSADLFLSGFSGYLASTSDILMTELTAIHHGMLLAMDLGIDDMVCHSDSLL 123
Query: 382 VLDLILKGHSIYHCYAVVITNIQDM 308
+ L+ + S YH YAV+I +I+++
Sbjct: 124 SIQLLTEHVSPYHTYAVLIQDIKNL 148
[28][TOP]
>UniRef100_Q2HRS8 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HRS8_MEDTR
Length = 201
Score = 71.2 bits (173), Expect = 5e-11
Identities = 43/130 (33%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = -3
Query: 520 SWIIGFSGYLGLKDNTF-AELMAIYHGLKIARDLGFSSILCYSDSQTVLDLILKGHSIYH 344
S I+ GY+ AEL+ IY L +A+ + ++CY DS ++LI YH
Sbjct: 71 SVILNVDGYIHNSSYILQAELLDIYQDLMLAKSMNIDELVCYFDSLHGINLIKGPPMKYH 130
Query: 343 CYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESPPEALKSIL 164
+ V+I +I+D+++ N +I + H+L++GN AD++AK G+ ++ I SPP + S+L
Sbjct: 131 VHDVLIQDIKDLVEEN-NIIVRHTLQKGNQFADFMAKFGALSNVDFLIHPSPPIDIMSLL 189
Query: 163 LSDALRVLHP 134
+DA P
Sbjct: 190 KNDATGTFLP 199
[29][TOP]
>UniRef100_B9SX47 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SX47_RICCO
Length = 177
Score = 70.5 bits (171), Expect = 9e-11
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Frame = -3
Query: 544 GLIRRSDGSWIIGFSGYLGLKDNTF-AELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GL R SDG W F+ L + F AEL +I +GLKIA D GF +I+ +D++ +D I
Sbjct: 31 GLFRNSDGQWCGAFAIKLTDCYSAFVAELCSILNGLKIAWDAGFKNIILETDNKISVDTI 90
Query: 367 LKGHSIYHCYA----VVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLG-SANDTKIK 203
G C ++IT+I++ML + W++ L H REGN A+ LA K+
Sbjct: 91 Y-GDFDTKCIGDLEDLLITSIKEMLAMAWNVKLQHQYREGNQVAEALANFAVDFPPGKMV 149
Query: 202 IWESPPEALKSILLSD 155
+ + PPE+ ++L+ D
Sbjct: 150 MLDYPPESTINLLIED 165
[30][TOP]
>UniRef100_B9SG51 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9SG51_RICCO
Length = 132
Score = 70.5 bits (171), Expect = 9e-11
Identities = 38/96 (39%), Positives = 52/96 (54%)
Frame = -3
Query: 523 GSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLILKGHSIYH 344
G WI GF +G T A L +YHGL +A LG +L DS + L+ I
Sbjct: 4 GMWIHGFVVNIGRCSITGAGLWGLYHGLTLAWKLGIRKLLVKVDSMCAVPLVTGEKDISS 63
Query: 343 CYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLA 236
YA +++ I+ ML NW +++SH RE NF+AD LA
Sbjct: 64 SYAPLVSGIRSMLGQNWQVSVSHVYREANFAADGLA 99
[31][TOP]
>UniRef100_B9MTZ7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MTZ7_POPTR
Length = 128
Score = 70.1 bits (170), Expect = 1e-10
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAI-YHGLKIARDLGFSSILCYSDSQ 386
GR G GLI +G +++GF+G+ G ELMA+ HGL +A + G+ ILC SDS
Sbjct: 28 GRAGSEGLIHHREGLFVVGFTGFAGFGCKLLPELMALKKHGLLLAWERGYRRILCDSDSM 87
Query: 385 TVLDLILKGHSI-YHCYAVVITNIQDMLKLNWDITLSHS 272
+ L+ G +H + +I +I+D+LK +W + L H+
Sbjct: 88 DAIWLVTAGIDYEFHKFGALIVDIRDLLKRDWLVKLHHT 126
[32][TOP]
>UniRef100_B9I2C0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I2C0_POPTR
Length = 1052
Score = 68.9 bits (167), Expect = 2e-10
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = -3
Query: 361 GHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESPPE 182
G + Y +I I+++L+ +W + + H+ RE NF AD++AKL ++ D + IW+ PP+
Sbjct: 974 GEDMKWVYRALIFEIRELLRRDWTVRIEHTFREANFCADFMAKLATSCDNGLMIWDEPPQ 1033
Query: 181 ALKSILLSDALRVLHP 134
L+ +LL+D +R+ P
Sbjct: 1034 GLQQLLLADIMRISFP 1049
[33][TOP]
>UniRef100_B9H202 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H202_POPTR
Length = 202
Score = 68.9 bits (167), Expect = 2e-10
Identities = 42/142 (29%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
T+G+ GG+ R + +++G++ +G +T AEL A+ GL++ + G+S++ DS
Sbjct: 54 TAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAELAALRRGLELVLENGWSNVWLEGDS 113
Query: 388 QTVLDLILKGHSIYHCYAV--VITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSAND 215
++++D+I+K + C +++I ++ + ++H REGN +AD LA++G
Sbjct: 114 KSLVDIIVKRKQV-RCKEAQRQVSHINLIMPELQNCVVTHVFREGNRAADKLARIGHQLQ 172
Query: 214 TKIKIWES-PPEALKSILLSDA 152
K KIW PP+ + I+ DA
Sbjct: 173 -KPKIWRHIPPDDILRIVHEDA 193
[34][TOP]
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O82276_ARATH
Length = 1231
Score = 68.2 bits (165), Expect = 4e-10
Identities = 42/136 (30%), Positives = 64/136 (47%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GG IR G W+ GF+ +G AEL Y+GL IA D GF + D +
Sbjct: 1084 GLAAAGGAIRNGQGEWLGGFALNIGSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKL 1143
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
V+ + G S H + ++ Q +W + +SH RE N AD LA +
Sbjct: 1144 VVGFLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFTLPLGLH 1203
Query: 202 IWESPPEALKSILLSD 155
+++ PE ++ +LL+D
Sbjct: 1204 CFDACPEGVRLLLLAD 1219
[35][TOP]
>UniRef100_B9SWE6 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SWE6_RICCO
Length = 219
Score = 68.2 bits (165), Expect = 4e-10
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTF-AELMAIYHGLKIARDLGFSSILCYSD 392
+SG GL R +G W GF+ L + F AEL I +GL IA + GF +I+ +D
Sbjct: 65 SSGIATAAGLFRNCNGQWCGGFAIKLRDCYSAFVAELFGILNGLNIAWNAGFRNIILETD 124
Query: 391 SQTVLDLILKGHSIYHC---YAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLG-S 224
++T +D I ++IT+I++ML W+I L H REGN AD LA
Sbjct: 125 NKTSVDKIYGDSDTKRMGDLEDLLITSIKEMLTKEWNIKLQHQYREGNRVADALANFAVD 184
Query: 223 ANDTKIKIWESPPEALKSILLSD 155
+ +I PPE+ S+L+ D
Sbjct: 185 FSPGQIVALHYPPESTISLLMED 207
[36][TOP]
>UniRef100_Q9SI81 F23N19.5 n=1 Tax=Arabidopsis thaliana RepID=Q9SI81_ARATH
Length = 233
Score = 67.4 bits (163), Expect = 7e-10
Identities = 42/138 (30%), Positives = 62/138 (44%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG +R G W GF+ +G AEL +Y+GL +A D G + + DS+ V+ +
Sbjct: 91 GGALRNEYGEWCFGFALNIGRCLAPLAELWGVYYGLFMAWDRGITRLELEVDSEMVVGFL 150
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
G H + ++ L +W + + H RE N AD LA + SP
Sbjct: 151 RTGIGSSHPLSFLVRMCHGFLSRDWIVRIGHVYREANRLADGLANYAFDLPLGYHAFASP 210
Query: 187 PEALKSILLSDALRVLHP 134
P +L SIL D L + P
Sbjct: 211 PNSLDSILRDDELGISVP 228
[37][TOP]
>UniRef100_Q9FNQ6 Gb|AAF19536.1 n=1 Tax=Arabidopsis thaliana RepID=Q9FNQ6_ARATH
Length = 657
Score = 67.4 bits (163), Expect = 7e-10
Identities = 39/142 (27%), Positives = 63/142 (44%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
S T G++R G W+ G+ A L+AIY GLK D GF I + S
Sbjct: 516 SDLTRSAGIVRDQSGKWVFGYIRCHKSIPEVVAGLLAIYQGLKYLWDSGFRRIHLETTSF 575
Query: 385 TVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKI 206
+++ + S++ ++ +DM+ W+ + H +E N A+WLAK ++
Sbjct: 576 EIINALTTKSSLFCKSKTLLGACKDMILKEWECDIYHISKEQNSCAEWLAKRSEEQPQEL 635
Query: 205 KIWESPPEALKSILLSDALRVL 140
+E PP L L D L +
Sbjct: 636 VFFEYPPRGLMDFLEKDRLAAM 657
[38][TOP]
>UniRef100_B9SFD3 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9SFD3_RICCO
Length = 201
Score = 66.2 bits (160), Expect = 2e-09
Identities = 39/139 (28%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G+ GG+ R +++G++ +G +T AEL A+ GL++ + G+S++ D++T
Sbjct: 55 GKGSIGGVFRNHKAEFLLGYAESIGRSTSTIAELAALRRGLELVLENGWSNVWLEGDAKT 114
Query: 382 VLDLILKGHSIYHCYAVV--ITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTK 209
+L++I+K + C + +++I ++ + +SH REGN +AD LA++G
Sbjct: 115 LLEIIVKRRKV-RCAQMQRHVSDINLIIPELDNCIVSHVYREGNRAADKLAQIGHQLQKP 173
Query: 208 IKIWESPPEALKSILLSDA 152
W PP+ + I+ DA
Sbjct: 174 KIWWHIPPDDVLPIVHEDA 192
[39][TOP]
>UniRef100_B9RKW4 Nuclease, putative n=1 Tax=Ricinus communis RepID=B9RKW4_RICCO
Length = 145
Score = 66.2 bits (160), Expect = 2e-09
Identities = 39/121 (32%), Positives = 62/121 (51%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG+IR S+G W+ GF ++G D AEL A G+ +A G +++ DS V D +
Sbjct: 22 GGIIRDSNGCWVGGFVIHIGACDPVGAELWAFLQGISLAWSKGIHNLIVEVDSSLVADWM 81
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
K +A +++ D+L+ WD+ + H RE N AD LA + A +I + +
Sbjct: 82 NKKSVCKSIHANLVSACLDLLQNWWDVKIKHVFREMNQVADSLANIVFAFAVRIHVLDEM 141
Query: 187 P 185
P
Sbjct: 142 P 142
[40][TOP]
>UniRef100_B9REA7 Nucleic acid binding protein, putative n=1 Tax=Ricinus communis
RepID=B9REA7_RICCO
Length = 244
Score = 65.9 bits (159), Expect = 2e-09
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTF-AELMAIYHGLKIARDLGFSSILCYSDSQ 386
G GGLIR S G WI GF Y+GL + AEL+ + GLK+AR +G ++ +D++
Sbjct: 98 GPAAAGGLIRDSRGRWIRGFKCYMGLGSTSVKAELLGLIEGLKLARKIGCEKLIVETDNE 157
Query: 385 TVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKI 206
V+ +I + + ++ + IQ +L+ W++ H + N AD LA G
Sbjct: 158 GVVQMIKIKTNRQNDNYILASEIQQLLQKGWEV--QHCKNKQNRCADRLANYGLEEPHVY 215
Query: 205 KIWESPP--EALKSILLSDALRVLHP 134
+ PP L IL +++ V P
Sbjct: 216 QELSCPPMYRDLHDILKQESVDVAFP 241
[41][TOP]
>UniRef100_B9TAI7 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus
communis RepID=B9TAI7_RICCO
Length = 120
Score = 65.5 bits (158), Expect = 3e-09
Identities = 36/111 (32%), Positives = 57/111 (51%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
GR GGLIR +G WI GF LG+ FAEL IYHGL +A G ++ + + +
Sbjct: 10 GRASLGGLIRDHNGDWIRGFMANLGVYSVMFAELQGIYHGLCLAWSKGIKKVVLEAYNLS 69
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKL 230
+ ++ + ++ I+ M+ W I ++H +EGN A+ LA +
Sbjct: 70 IKMVLNRAKDGCIQNIALVKEIRKMITREWQIQVTHINQEGNKCANLLANM 120
[42][TOP]
>UniRef100_Q9ZUY7 Putative reverse transcriptase n=1 Tax=Arabidopsis thaliana
RepID=Q9ZUY7_ARATH
Length = 314
Score = 64.7 bits (156), Expect = 5e-09
Identities = 39/136 (28%), Positives = 66/136 (48%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GG++R +G+W GF+ +G+ AEL +Y+GL IA + + + DS+
Sbjct: 167 GLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEI 226
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
V+ + G + H + ++ D + +W + +SH RE N AD LA +
Sbjct: 227 VVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFH 286
Query: 202 IWESPPEALKSILLSD 155
P++L+ ILL D
Sbjct: 287 SLSLVPDSLRFILLDD 302
[43][TOP]
>UniRef100_A0MEQ4 Putative uncharacterized protein (Fragment) n=1 Tax=Arabidopsis
thaliana RepID=A0MEQ4_ARATH
Length = 315
Score = 64.7 bits (156), Expect = 5e-09
Identities = 39/136 (28%), Positives = 66/136 (48%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GG++R +G+W GF+ +G+ AEL +Y+GL IA + + + DS+
Sbjct: 167 GLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEI 226
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
V+ + G + H + ++ D + +W + +SH RE N AD LA +
Sbjct: 227 VVGFLKIGINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFH 286
Query: 202 IWESPPEALKSILLSD 155
P++L+ ILL D
Sbjct: 287 SLSLVPDSLRFILLDD 302
[44][TOP]
>UniRef100_B2BXY8 Non-LTR retrotransposon transposase n=1 Tax=Arabidopsis cebennensis
RepID=B2BXY8_9BRAS
Length = 799
Score = 63.9 bits (154), Expect = 8e-09
Identities = 38/131 (29%), Positives = 66/131 (50%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG++R+ DGSWI GF+ +G+ AEL +Y+GL IA + + + DS+ V+ +
Sbjct: 652 GGILRQQDGSWIGGFAVNIGICSAPLAELWRVYYGLYIAWERKITRLEVEVDSELVVGFL 711
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
S H + ++ + +W + +SH RE N AD LA S+ ++
Sbjct: 712 TTWISDSHPLSFLVRLCYGFISRDWIVRISHVYREANRLADGLANYASSLPLGFHSFDVC 771
Query: 187 PEALKSILLSD 155
+ + S+L+ D
Sbjct: 772 LKIVYSVLVED 782
[45][TOP]
>UniRef100_A5BWY9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BWY9_VITVI
Length = 395
Score = 63.9 bits (154), Expect = 8e-09
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
+GR G GGL+R + GS+I F+ L ++ AE+ A+ GL++A L IL DS+
Sbjct: 247 TGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMAEIGALEGGLRLALKLNVERILIEGDSK 306
Query: 385 TVLDLIL-KGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTK 209
++++ K ++T+I+++L+ ++T H RE N AD LA + +
Sbjct: 307 ITIEMLSGKREXTXEEEKSLMTHIRELLQGFQEVTARHEFREANRPADHLANIATQAHEP 366
Query: 208 IKIWESPPEALKSILLSD 155
++ PP +L L D
Sbjct: 367 MEWHPHPPHSLLPFLHHD 384
[46][TOP]
>UniRef100_UPI00019860A8 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019860A8
Length = 205
Score = 63.5 bits (153), Expect = 1e-08
Identities = 39/141 (27%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
+SGR GG+IR + ++++G++ +G ++T AE+ A+ GL++ + G+S + D
Sbjct: 57 SSGRASIGGVIRDHNAAFLLGYAESIGHANSTIAEMAALRRGLELVVENGWSQVWLEGDL 116
Query: 388 QTVLDLILKGHSIYHCYA-VVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
Q+++++I++G + A +++I+ ++ + ++H REGN A A++G
Sbjct: 117 QSLVEIIMQGRRVRSAEAQKQVSHIKLLIPELDNFLITHIYREGNRVAHTFAQMGHRLKH 176
Query: 211 KIKIWES-PPEALKSILLSDA 152
+IW P E L++IL +A
Sbjct: 177 P-QIWRHIPNEVLRNILRENA 196
[47][TOP]
>UniRef100_O80790 Putative non-LTR retroelement reverse transcriptase n=1
Tax=Arabidopsis thaliana RepID=O80790_ARATH
Length = 970
Score = 63.5 bits (153), Expect = 1e-08
Identities = 43/137 (31%), Positives = 60/137 (43%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G G I G W+ GF+ +G D AEL Y+GL IA D GF + DS+
Sbjct: 823 GLAAASGAILNLQGEWLGGFALNIGSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSEL 882
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
V+ + G S H + ++ Q +W + +SH RE N AD LA
Sbjct: 883 VVGFLSTGISKAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFFLPLGFH 942
Query: 202 IWESPPEALKSILLSDA 152
+E PE + L+ DA
Sbjct: 943 CFEICPEDVLLFLVEDA 959
[48][TOP]
>UniRef100_A7R2T4 Chromosome undetermined scaffold_448, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7R2T4_VITVI
Length = 2141
Score = 63.5 bits (153), Expect = 1e-08
Identities = 39/141 (27%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
+SGR GG+IR + ++++G++ +G ++T AE+ A+ GL++ + G+S + D
Sbjct: 57 SSGRASIGGVIRDHNAAFLLGYAESIGHANSTIAEMAALRRGLELVVENGWSQVWLEGDL 116
Query: 388 QTVLDLILKGHSIYHCYA-VVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
Q+++++I++G + A +++I+ ++ + ++H REGN A A++G
Sbjct: 117 QSLVEIIMQGRRVRSAEAQKQVSHIKLLIPELDNFLITHIYREGNRVAHTFAQMGHRLKH 176
Query: 211 KIKIWES-PPEALKSILLSDA 152
+IW P E L++IL +A
Sbjct: 177 P-QIWRHIPNEVLRNILRENA 196
[49][TOP]
>UniRef100_B9SC59 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9SC59_RICCO
Length = 159
Score = 62.8 bits (151), Expect = 2e-08
Identities = 41/141 (29%), Positives = 60/141 (42%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
+G GGLIR ++GSW+ GF+ LG AE + GL++A D G + +
Sbjct: 44 NGLASAGGLIRNTEGSWLFGFTHKLGSCSPLGAEFWGVLDGLRLAWDKGTKAPIAR---- 99
Query: 385 TVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKI 206
+W IT +H+ RE N ADW A+L + ++
Sbjct: 100 -----------------------------HWSITCTHACREANVCADWSAELAHDSTLEV 130
Query: 205 KIWESPPEALKSILLSDALRV 143
I + P L +LL DAL V
Sbjct: 131 NILDCLPADLLQLLLGDALGV 151
[50][TOP]
>UniRef100_Q1PEZ4 Putative uncharacterized protein n=1 Tax=Arabidopsis thaliana
RepID=Q1PEZ4_ARATH
Length = 314
Score = 62.0 bits (149), Expect = 3e-08
Identities = 38/136 (27%), Positives = 65/136 (47%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GG++R +G+W GF+ +G+ AEL +Y+GL IA + + + DS+
Sbjct: 167 GLASAGGVLRDEEGAWRGGFALNIGVCSAPLAELWGVYYGLYIAWERRVTRLEIEVDSEI 226
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
V+ + + H + ++ D + +W + +SH RE N AD LA +
Sbjct: 227 VVGFLKIXINEVHPLSFLVRLCHDFISRDWRVRISHVYREANRLADGLANYAFSLPLGFH 286
Query: 202 IWESPPEALKSILLSD 155
P++L+ ILL D
Sbjct: 287 SLSLVPDSLRFILLDD 302
[51][TOP]
>UniRef100_A5B4E3 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5B4E3_VITVI
Length = 697
Score = 62.0 bits (149), Expect = 3e-08
Identities = 39/141 (27%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
+SGR GG+IR + ++++G++ +G +T AE+ A+ GL++ + G+S + D
Sbjct: 492 SSGRASIGGVIRDHNAAFLLGYAESIGHAXSTIAEMAALRRGLELVVENGWSQVWLEGDL 551
Query: 388 QTVLDLILKGHSIYHCYA-VVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
Q+++++I++G + A +++I+ ++ + ++H REGN A A++G
Sbjct: 552 QSLVEIIMQGRRVRSAEAQKQVSHIKLLIPELDNFLITHIYREGNRVAHTFAQMGHRLKH 611
Query: 211 KIKIWES-PPEALKSILLSDA 152
+IW P E L+ IL +A
Sbjct: 612 P-QIWRHIPNEXLRBILRENA 631
[52][TOP]
>UniRef100_O65407 Putative uncharacterized protein AT4g21420 n=1 Tax=Arabidopsis
thaliana RepID=O65407_ARATH
Length = 229
Score = 61.6 bits (148), Expect = 4e-08
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G+ GG+ R +++G+S +G +T AE A+ GL++A + G + + D++
Sbjct: 83 GQASIGGVFRNHKAEFLLGYSESIGEATSTMAEFAALKRGLELALENGLTDLWLEGDAKI 142
Query: 382 VLDLILKGHSI-------YHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGS 224
++D+I + + + Y V+ M +LN + LSH REGN AD LAKLG
Sbjct: 143 IMDIISRRGRLRCEKTNKHVNYIKVV-----MPELN-NCVLSHVYREGNRVADKLAKLGH 196
Query: 223 ANDTKIKIWE-SPPEALKSILLSDA 152
K+W PPE + I+ DA
Sbjct: 197 QFQDP-KVWRVQPPEIVLPIMHDDA 220
[53][TOP]
>UniRef100_A7Y5W5 At4g21420 n=1 Tax=Arabidopsis thaliana RepID=A7Y5W5_ARATH
Length = 197
Score = 61.6 bits (148), Expect = 4e-08
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G+ GG+ R +++G+S +G +T AE A+ GL++A + G + + D++
Sbjct: 55 GQASIGGVFRNHKAEFLLGYSESIGEATSTMAEFAALKRGLELALENGLTDLWLEGDAKI 114
Query: 382 VLDLILKGHSI-------YHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGS 224
++D+I + + + Y V+ M +LN + LSH REGN AD LAKLG
Sbjct: 115 IMDIISRRGRLRCEKTNKHVNYIKVV-----MPELN-NCVLSHVYREGNRVADKLAKLGH 168
Query: 223 ANDTKIKIWE-SPPEALKSILLSDA 152
K+W PPE + I+ DA
Sbjct: 169 QFQDP-KVWRVQPPEIVLPIMHDDA 192
[54][TOP]
>UniRef100_B9H0B1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H0B1_POPTR
Length = 104
Score = 61.2 bits (147), Expect = 5e-08
Identities = 24/82 (29%), Positives = 48/82 (58%)
Frame = -3
Query: 379 LDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKI 200
L L+ +H Y + I+++L +W + + H+ R+ NF AD++AK ++ D + I
Sbjct: 20 LRLLFANQVGFHKYRALTFEIRELLSRDWTVRIEHTFRKANFCADFMAKFATSCDNGLMI 79
Query: 199 WESPPEALKSILLSDALRVLHP 134
W+ PP+ L+ +LL++ + + P
Sbjct: 80 WDEPPQGLQQLLLANIMGISFP 101
[55][TOP]
>UniRef100_P0C2F6 Putative ribonuclease H protein At1g65750 n=1 Tax=Arabidopsis
thaliana RepID=RNHX1_ARATH
Length = 620
Score = 61.2 bits (147), Expect = 5e-08
Identities = 39/143 (27%), Positives = 64/143 (44%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GG++R G+W GFS +G AEL +Y+GL A + + DS+
Sbjct: 473 GLASAGGVLRDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEV 532
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
++ + G S H + ++ L+ +W + + H RE N AD LA +
Sbjct: 533 IVGFLKTGISDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSLGFH 592
Query: 202 IWESPPEALKSILLSDALRVLHP 134
++ P+A+ S+L D L P
Sbjct: 593 SFDLVPDAMSSLLREDTLGSTRP 615
[56][TOP]
>UniRef100_UPI0001985F00 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001985F00
Length = 399
Score = 60.8 bits (146), Expect = 7e-08
Identities = 38/141 (26%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
++GR GG+IR + +++G++ +G +T AE+ A+ GL++ + G+S + D
Sbjct: 149 STGRASIGGVIRDHNAVFLLGYAESIGHTTSTIAEMAALRRGLELVLENGWSQVWLEGDL 208
Query: 388 QTVLDLILKGHSIYHCYA-VVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
Q+++++I++G + A +++I+ ++ + ++H REGN A A++G
Sbjct: 209 QSLVEIIMQGRRVRSAEAQKQVSHIKLLIPELDNFLITHIYREGNRVAHTFAQMGHRLKH 268
Query: 211 KIKIWES-PPEALKSILLSDA 152
+IW P E L++IL +A
Sbjct: 269 P-QIWRHIPNEVLRNILRENA 288
[57][TOP]
>UniRef100_B9HYN7 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9HYN7_POPTR
Length = 171
Score = 60.8 bits (146), Expect = 7e-08
Identities = 38/142 (26%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
++G+ GG+ R + +++G++ +G + AEL A+ GL++ + G+ ++ DS
Sbjct: 25 SAGKASIGGVFRNHEAEFLLGYAESIGRTTSMIAELAALRRGLELVLENGWGNVWLEGDS 84
Query: 388 QTVLDLILKGHSIYHCYAV--VITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSAND 215
++++D+I+K + C ++ I ++ + ++H REGN +AD LA++ +
Sbjct: 85 KSLVDIIVK-RKLVRCKEAQRQVSYINLIIPELKNCLVTHVFREGNRAADKLARI-AYQL 142
Query: 214 TKIKIWES-PPEALKSILLSDA 152
K KIW PP+ + IL +A
Sbjct: 143 QKPKIWRHIPPDTILQILHENA 164
[58][TOP]
>UniRef100_Q6L3X8 Putative uncharacterized protein n=1 Tax=Solanum demissum
RepID=Q6L3X8_SOLDE
Length = 1155
Score = 60.1 bits (144), Expect = 1e-07
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
+GR G GG++R + G I+ F+ LG +++AE M++ HG+++ G + I+ +DS
Sbjct: 1010 NGRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRGVNMIIGETDSI 1069
Query: 385 TVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTK- 209
+ I + SI + + IQ M++ + I ++H LRE N AD LA + + D
Sbjct: 1070 LLAKAITENWSIPWRMYIPVKKIQKMVEEHGFI-INHCLREANQPADKLASISLSTDVNH 1128
Query: 208 -IKIWESPPEALKSILLSDALRV 143
K + + P +K ++ D + +
Sbjct: 1129 VFKSYANLPSLVKGLVNLDRMNL 1151
[59][TOP]
>UniRef100_B9P621 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9P621_POPTR
Length = 356
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARD---LGFSSILCYS 395
SG +G GG++R +G + FS +G+ D+ AEL A+ ++++ L I+
Sbjct: 230 SGPSGIGGVLRNHNGILLGIFSLSVGILDSNVAELKAVVKAIELSASNCRLHHKHIIIEC 289
Query: 394 DSQTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSAND 215
DS TV+ + H+ + + ++IQ + +T +HS RE N AD +AK G +
Sbjct: 290 DSATVIRWMNNPHNRPWLHHNLFSSIQRLASCFGSLTFTHSFRESNHMADHMAKQGVFRN 349
Query: 214 TKIKIW 197
T+ +W
Sbjct: 350 TEFVVW 355
[60][TOP]
>UniRef100_Q9FMM8 Non-LTR retroelement reverse transcriptase-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9FMM8_ARATH
Length = 308
Score = 59.7 bits (143), Expect = 2e-07
Identities = 37/138 (26%), Positives = 64/138 (46%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GG++R +G+W GFS +G AEL +Y+GL A + + DS+
Sbjct: 161 GLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGVYYGLYFAWEKKVPRVELEVDSEA 220
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
++ + G S H + ++ + L+ +W + + + RE N AD LA
Sbjct: 221 IVGFLKTGISDSHPLSFLVRLCHNFLQKDWLVRIVYVYREANCLADGLANYTILLSLGFH 280
Query: 202 IWESPPEALKSILLSDAL 149
++ P+A+ S+L D L
Sbjct: 281 SFDFVPDAMSSLLKEDTL 298
[61][TOP]
>UniRef100_C5Z882 Putative uncharacterized protein Sb10g027630 n=1 Tax=Sorghum
bicolor RepID=C5Z882_SORBI
Length = 221
Score = 59.7 bits (143), Expect = 2e-07
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Frame = -3
Query: 559 RTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTV 380
R GG+ R +G +++G++ +G ++ AEL A+ GL++A G+ S+ D++TV
Sbjct: 80 RASIGGVYRDHEGGFVLGYAERIGAATSSVAELAALRRGLELAVANGWRSVWIEGDAKTV 139
Query: 379 LDLILKGHSIYHCYAV---VITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTK 209
+D++ + + I+ +L L D+++SH R+GN A AKLG +
Sbjct: 140 VDVVRSRARVRVRSPEDLRLCGEIEKLLPLLDDMSVSHVRRQGNRVAHGFAKLGH-GAAR 198
Query: 208 IKIW-ESPPEALKSILLSDA 152
++W + PP+ + L DA
Sbjct: 199 PRVWRDVPPDEVLRFLQRDA 218
[62][TOP]
>UniRef100_UPI00019854AD PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019854AD
Length = 431
Score = 59.3 bits (142), Expect = 2e-07
Identities = 41/137 (29%), Positives = 64/137 (46%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GFGGL R +G I ++ D EL AI+ GL +A LG +I SDS +
Sbjct: 287 GNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMS 346
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
+ I + + +I +L+ +SH+ RE N +AD+L+K+ + + +
Sbjct: 347 AVKTINRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLSKMDLSGNDVVL 406
Query: 202 IWESPPEALKSILLSDA 152
P L SI+ DA
Sbjct: 407 GTADFPNGLNSIIKDDA 423
[63][TOP]
>UniRef100_B9SMZ5 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9SMZ5_RICCO
Length = 437
Score = 59.3 bits (142), Expect = 2e-07
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Frame = -3
Query: 553 GFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLD 374
GFGGL+R ++G+ I F L D EL AI+ GL +A LG I SDS + +
Sbjct: 296 GFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKVIWVESDSMSAVK 355
Query: 373 LILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLG-SANDTKIKIW 197
I + S + +I +LK + +SH+ RE N +AD+L+K+ ND + +W
Sbjct: 356 TINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSKMVLERND--VVLW 413
Query: 196 ESP-PEALKSILLSDA 152
P L++I+ DA
Sbjct: 414 PVHFPTTLQNIIKDDA 429
[64][TOP]
>UniRef100_A5BAI8 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BAI8_VITVI
Length = 318
Score = 58.2 bits (139), Expect = 4e-07
Identities = 41/137 (29%), Positives = 63/137 (45%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G GFGGL R +G I ++ D EL AI+ GL +A LG +I SDS +
Sbjct: 174 GNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMS 233
Query: 382 VLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIK 203
V+ I + + +I +L +SH+ RE N +AD+L+++ + +
Sbjct: 234 VVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLSRMDLSGSDVVL 293
Query: 202 IWESPPEALKSILLSDA 152
P L SI+ DA
Sbjct: 294 GTADFPNGLNSIIKDDA 310
[65][TOP]
>UniRef100_B9HC32 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HC32_POPTR
Length = 670
Score = 57.8 bits (138), Expect = 6e-07
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIAR---DLGFSSILCYS 395
SG +G GG++R +G + FS +G+ D+ AEL A+ ++++ L I+ S
Sbjct: 544 SGPSGIGGVLRNHNGIILGIFSLSVGILDSNVAELKAVVKAIELSAFNCRLHHKHIIIES 603
Query: 394 DSQTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSAND 215
DS V+ + H+ + + ++IQ +T +HSLRE N AD +AK G +
Sbjct: 604 DSANVISWMNSPHNRPWRHHNLFSSIQRAASCFGSLTFTHSLRESNHMADHMAKQGVFRN 663
Query: 214 TKIKIW 197
T+ W
Sbjct: 664 TEFVAW 669
[66][TOP]
>UniRef100_B9H6T1 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H6T1_POPTR
Length = 329
Score = 57.8 bits (138), Expect = 6e-07
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQ 386
S G GGL R +G+ I GF D EL AI+ GL +A +L + SDS
Sbjct: 185 SENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRGLVLALNLHIQVLWVESDSL 244
Query: 385 TVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKI 206
+V++ I + + I+ +LK +SHS RE N +AD+LAK+ D +
Sbjct: 245 SVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRETNRAADYLAKMVVERD--V 302
Query: 205 KIWESP-PEALKSILLSDA 152
+W + P +L +I+ DA
Sbjct: 303 VLWPADFPTSLNNIIKDDA 321
[67][TOP]
>UniRef100_A8MGA0 Ribonuclease H n=1 Tax=Alkaliphilus oremlandii OhILAs
RepID=A8MGA0_ALKOO
Length = 134
Score = 57.0 bits (136), Expect = 1e-06
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQT 383
G G G I+ DG+ I S Y+G + N AE A+ GL++A DLG I CY DS+
Sbjct: 19 GIAGIGVSIQDKDGNIIREISQYIGEQTNNVAEYKALSRGLEVALDLGIEKITCYLDSEL 78
Query: 382 VLDLILKGHSIYHCYAVVITN-IQDMLKLNWDITLSHSLREGNFSADWLA 236
V+ I + + + + + N + ++K +++H RE N AD LA
Sbjct: 79 VVKQIKGEYKVKNERMIPMYNMVMPLVKEFKSFSINHVRRELNKRADQLA 128
[68][TOP]
>UniRef100_Q2HRR4 Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HRR4_MEDTR
Length = 302
Score = 57.0 bits (136), Expect = 1e-06
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = -3
Query: 553 GFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLD 374
G GGL+R+SDG+WI GFS +G D AE+ +Y GL +A G S ++ SDS+ ++D
Sbjct: 226 GCGGLLRQSDGTWIKGFSRKIGACDALHAEMWGLYLGLDMAWREGISHLIVESDSKVLID 285
Query: 373 LI 368
++
Sbjct: 286 MV 287
[69][TOP]
>UniRef100_Q9FXC8 F12A21.24 n=1 Tax=Arabidopsis thaliana RepID=Q9FXC8_ARATH
Length = 803
Score = 56.6 bits (135), Expect = 1e-06
Identities = 37/138 (26%), Positives = 61/138 (44%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG+IR G+W GF+ +G AEL +Y+G +A + + DS+ V+ +
Sbjct: 661 GGVIRDGAGNWCGGFALNIGRCSAPLAELWGVYYGFYLAWTKALTRVELEVDSELVVGFL 720
Query: 367 LKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESP 188
G H + ++ +L +W + ++H RE N AD LA +
Sbjct: 721 KTGIGDQHPLSFLVRLCHGLLSKDWIVRITHVYREANRLADGLANYAFSLPLGFHSLIDV 780
Query: 187 PEALKSILLSDALRVLHP 134
P+ L+ IL D+L P
Sbjct: 781 PDDLEVILHEDSLGSTRP 798
[70][TOP]
>UniRef100_Q6K204 Putative uncharacterized protein B1469H02.35 n=1 Tax=Oryza sativa
Japonica Group RepID=Q6K204_ORYSJ
Length = 212
Score = 56.2 bits (134), Expect = 2e-06
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG+ R +G++++G++ +G ++ AEL A+ GL++ G+ + DS+TV+D++
Sbjct: 77 GGVYRDHEGAFVLGYAERIGRATSSVAELAALRRGLELVVRNGWRRVWAEGDSKTVVDVV 136
Query: 367 LKGHSIYHCYAV-VITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWE- 194
++ + I +L L D+ +SH R GN A A+LG + ++W
Sbjct: 137 CDRANVRSEEDLRQCREIAALLPLIDDMAVSHVYRSGNKVAHGFARLGH-KAVRPRVWRA 195
Query: 193 SPPEALKSILLSDA 152
+PPE + L DA
Sbjct: 196 APPEEVLRFLQQDA 209
[71][TOP]
>UniRef100_B9F175 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9F175_ORYSJ
Length = 204
Score = 56.2 bits (134), Expect = 2e-06
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = -3
Query: 547 GGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLI 368
GG+ R +G++++G++ +G ++ AEL A+ GL++ G+ + DS+TV+D++
Sbjct: 69 GGVYRDHEGAFVLGYAERIGRATSSVAELAALRRGLELVVRNGWRRVWAEGDSKTVVDVV 128
Query: 367 LKGHSIYHCYAV-VITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWE- 194
++ + I +L L D+ +SH R GN A A+LG + ++W
Sbjct: 129 CDRANVRSEEDLRQCREIAALLPLIDDMAVSHVYRSGNKVAHGFARLGH-KAVRPRVWRA 187
Query: 193 SPPEALKSILLSDA 152
+PPE + L DA
Sbjct: 188 APPEEVLRFLQQDA 201
[72][TOP]
>UniRef100_Q9FWJ4 Putative uncharacterized protein F21N10.9 n=1 Tax=Arabidopsis
thaliana RepID=Q9FWJ4_ARATH
Length = 256
Score = 55.8 bits (133), Expect = 2e-06
Identities = 35/127 (27%), Positives = 56/127 (44%)
Frame = -3
Query: 535 RRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLILKGH 356
R G+W GFS +G+ AEL +Y+GL IA + + + DS+ V+ + G
Sbjct: 37 REHQGNWCGGFSVSIGICSAPQAELWGVYYGLYIAWEKWVTRVELEVDSEIVVGFLKTGI 96
Query: 355 SIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESPPEAL 176
H + + + +W + +SH RE N AD LA + S P+ +
Sbjct: 97 GDSHPLSFLARLCYGFISKDWIVRISHVYREANRLADGLANYAFTLPLGFHFFHSSPDVV 156
Query: 175 KSILLSD 155
S+ L D
Sbjct: 157 DSVRLED 163
[73][TOP]
>UniRef100_Q2HS21 Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago
truncatula RepID=Q2HS21_MEDTR
Length = 104
Score = 55.1 bits (131), Expect = 4e-06
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLG-LKDNTFAELMAIYHGLKIARDLGFSSILCY 398
T R GFGGLIR + G ++ FSG+L L AEL AI+ GL++A D+GF ++CY
Sbjct: 47 TPTRAGFGGLIRNNAGFFLSSFSGFLSDLTCILLAELTAIHKGLQLAMDIGFEELVCY 104
[74][TOP]
>UniRef100_B8B1V5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8B1V5_ORYSI
Length = 206
Score = 55.1 bits (131), Expect = 4e-06
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
++G GG+ R DG++++G++ +G ++ AEL A+ GL++A G+ + DS
Sbjct: 64 STGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALRRGLELAVRNGWRRVWAEGDS 123
Query: 388 QTVLDLILKGHSIYHCYAV-VITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
+ V+D++ + + + I +L D+ +SH R GN A A+LG
Sbjct: 124 KAVVDVVCDRADVQSEEDLRLCREIAALLPQLDDMAVSHVRRGGNKVAHGFAELGH-RTA 182
Query: 211 KIKIWE-SPPEALKSILLSDALR 146
+ ++W +PP+ + L DA R
Sbjct: 183 RPRVWRAAPPDEVLWFLRRDADR 205
[75][TOP]
>UniRef100_B7FKK3 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FKK3_MEDTR
Length = 72
Score = 55.1 bits (131), Expect = 4e-06
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = -3
Query: 445 GLKIARDLGFSSILCYSDSQTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLR 266
GL++A+ L ++CYSDS ++LI +YH YA +I +I+D+++L + H+LR
Sbjct: 2 GLQLAQTLNIVDVVCYSDSLHYVNLINGPSVVYHAYATLIQDIKDLIRL----SKLHTLR 57
Query: 265 EGNFSADWL 239
EGN AD+L
Sbjct: 58 EGNRCADFL 66
[76][TOP]
>UniRef100_Q655G6 Os06g0683500 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q655G6_ORYSJ
Length = 240
Score = 54.7 bits (130), Expect = 5e-06
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = -3
Query: 568 TSGRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
++G GG+ R DG++++G++ +G ++ AEL A+ GL++A G+ + DS
Sbjct: 98 STGIASIGGVYRDHDGAFLLGYAERIGTATSSVAELAALRRGLELAVRNGWRRVWAEGDS 157
Query: 388 QTVLDLILKGHSIYHCYAV-VITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
+ V+D++ + + + I +L D+ +SH R GN A A+LG
Sbjct: 158 KAVVDVVCDRADVQSEEDLRLCREIAALLPQLDDMAVSHVRRGGNKVAHGFAELGH-RAA 216
Query: 211 KIKIWE-SPPEALKSILLSDALR 146
+ ++W +PP+ + L DA R
Sbjct: 217 RPRVWRAAPPDEVLWFLRRDADR 239
[77][TOP]
>UniRef100_B9SZ30 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9SZ30_RICCO
Length = 329
Score = 54.7 bits (130), Expect = 5e-06
Identities = 35/135 (25%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Frame = -3
Query: 565 SGRTGFGGLIRRSDGSWIIGFSGYL-GLKDNTFAELMAIYHGLKIARDLGFSSILCYSDS 389
SGR+GFG +IR S GS+++G G GL + AE + + ++ LG S+++ D+
Sbjct: 188 SGRSGFGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDA 247
Query: 388 QTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTK 209
+ V+D +L G + + VI + + +L+ + ++ ++ N A LA+ D
Sbjct: 248 KVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLARASHLQD-G 306
Query: 208 IKIWESPPEALKSIL 164
++ PP+ +++++
Sbjct: 307 FNMFSVPPDCIRNLV 321
[78][TOP]
>UniRef100_B9NHW4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NHW4_POPTR
Length = 216
Score = 54.7 bits (130), Expect = 5e-06
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Frame = -3
Query: 562 GRTGFGGLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARD---LGFSSILCYSD 392
G +G GG++R G + FS +G+ D+ AEL A+ ++++ L I SD
Sbjct: 91 GLSGIGGVLRNHHGHLLDIFSLPVGILDSNIAELRAVVKAVELSASNCLLHHKHITIESD 150
Query: 391 SQTVLDLILKGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDT 212
S V+ + H+ + + + +Q + + IT SH RE N AD +AK G +
Sbjct: 151 SANVISWMHNSHNRLWMHRELFSTVQRLTRFFGSITFSHVYRESNSLADCMAKQGVRRSS 210
Query: 211 KIKIW 197
W
Sbjct: 211 DFIAW 215
[79][TOP]
>UniRef100_B2BXJ9 Putative uncharacterized protein n=1 Tax=Arabidopsis lyrata subsp.
lyrata RepID=B2BXJ9_ARALY
Length = 172
Score = 53.9 bits (128), Expect = 8e-06
Identities = 34/132 (25%), Positives = 60/132 (45%)
Frame = -3
Query: 544 GLIRRSDGSWIIGFSGYLGLKDNTFAELMAIYHGLKIARDLGFSSILCYSDSQTVLDLIL 365
G++R SDG W GF+ +G AEL +Y+GL A + + ++ DS V+ +
Sbjct: 31 GVLRNSDGKWCGGFALNIGRCSAPLAELWGVYYGLYTAWEHRVTRLVLEVDSSLVVGFLT 90
Query: 364 KGHSIYHCYAVVITNIQDMLKLNWDITLSHSLREGNFSADWLAKLGSANDTKIKIWESPP 185
G H ++++ + +W + ++H R+ N AD LA + + S P
Sbjct: 91 TGIGDSHPLSILVRLCYGFIARDWIVRVTHVYRKANRFADGLANYVFSLPLGFHDFVSVP 150
Query: 184 EALKSILLSDAL 149
+ S L D +
Sbjct: 151 VVVDSFLRDDVV 162