BB909385 ( RCE08192 )

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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=UPI0000163E03
          Length = 824

 Score =  298 bits (762), Expect = 3e-79
 Identities = 142/191 (74%), Positives = 162/191 (84%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG GVG LP
Sbjct: 568  FMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLP 627

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            TK WV+ FG+ S LKN  GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+  K+
Sbjct: 628  TKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKM 687

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
            L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE
Sbjct: 688  LIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE 747

Query: 543  KELPTLMLNRA 575
               PTL+LN A
Sbjct: 748  -GFPTLILNEA 757

[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  298 bits (762), Expect = 3e-79
 Identities = 142/191 (74%), Positives = 162/191 (84%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG GVG LP
Sbjct: 2008 FMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLP 2067

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            TK WV+ FG+ S LKN  GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+  K+
Sbjct: 2068 TKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKM 2127

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
            L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE
Sbjct: 2128 LIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE 2187

Query: 543  KELPTLMLNRA 575
               PTL+LN A
Sbjct: 2188 -GFPTLILNEA 2197

[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  284 bits (727), Expect = 3e-75
 Identities = 140/191 (73%), Positives = 160/191 (83%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G G+G LP
Sbjct: 568  FMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLP 627

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            TK WV  FGK S LKN+KGYLI  LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+
Sbjct: 628  TKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKM 687

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
            L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE
Sbjct: 688  LIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE 747

Query: 543  KELPTLMLNRA 575
              LPT +LN+A
Sbjct: 748  -GLPTAILNQA 757

[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  284 bits (727), Expect = 3e-75
 Identities = 140/191 (73%), Positives = 160/191 (83%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G G+G LP
Sbjct: 2010 FMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLP 2069

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            TK WV  FGK S LKN+KGYLI  LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+
Sbjct: 2070 TKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKM 2129

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
            L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE
Sbjct: 2130 LIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE 2189

Query: 543  KELPTLMLNRA 575
              LPT +LN+A
Sbjct: 2190 -GLPTAILNQA 2199

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=UPI00017F0C90
          Length = 826

 Score =  231 bits (588), Expect = 4e-59
 Identities = 114/191 (59%), Positives = 138/191 (72%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FM  S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G  G H+PIK GGGVG LP
Sbjct: 567  FMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLP 625

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            T  WV +FG+ S LKN  GY  Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+
Sbjct: 626  THQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKI 685

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
            L ++  L HYRN IPES  GL  YFDAP+P A +G+ YF +GETYAAL +FK  +VL   
Sbjct: 686  LKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIV 745

Query: 543  KELPTLMLNRA 575
                  +LN A
Sbjct: 746  GPTNVQILNGA 756

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  231 bits (588), Expect = 4e-59
 Identities = 114/191 (59%), Positives = 138/191 (72%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FM  S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G  G H+PIK GGGVG LP
Sbjct: 1993 FMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLP 2051

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            T  WV +FG+ S LKN  GY  Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+
Sbjct: 2052 THQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKI 2111

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
            L ++  L HYRN IPES  GL  YFDAP+P A +G+ YF +GETYAAL +FK  +VL   
Sbjct: 2112 LKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIV 2171

Query: 543  KELPTLMLNRA 575
                  +LN A
Sbjct: 2172 GPTNVQILNGA 2182

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=UPI00003FE52F
          Length = 846

 Score =  174 bits (441), Expect = 4e-42
 Identities = 92/183 (50%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FMH S+ GN+ HF    L V GP YKP  +  +VST PLK G  G  VP++ G G+G LP
Sbjct: 575  FMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLP 634

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            T  WV  F + + L +A GY I+  +R  +E+GK ++F S APYVA NAAL+AFG A KL
Sbjct: 635  TIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKL 694

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGY 539
            L  + AL  YRN IPEST GLEQYFDA IPQA++ G FY  + E+ + L + K   V+G 
Sbjct: 695  LEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGL 754

Query: 540  EKE 548
              E
Sbjct: 755  TTE 757

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  174 bits (441), Expect = 4e-42
 Identities = 92/183 (50%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
 Frame = +3

Query: 3    FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
            FMH S+ GN+ HF    L V GP YKP  +  +VST PLK G  G  VP++ G G+G LP
Sbjct: 2065 FMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLP 2124

Query: 183  TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
            T  WV  F + + L +A GY I+  +R  +E+GK ++F S APYVA NAAL+AFG A KL
Sbjct: 2125 TIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKL 2184

Query: 363  LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGY 539
            L  + AL  YRN IPEST GLEQYFDA IPQA++ G FY  + E+ + L + K   V+G 
Sbjct: 2185 LEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGL 2244

Query: 540  EKE 548
              E
Sbjct: 2245 TTE 2247

[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score = 79.3 bits (194), Expect = 2e-13
 Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
 Frame = +3

Query: 54   LGVCGPHY--KPCEEDFIVSTEPLKMG--ILGEHVPIKYGGGVGRLPTKNWVMSFGKSSS 221
            + V GP +  + C++ F+VST PL       G H+P++ G G+GR+P+++WV  F +   
Sbjct: 1766 IAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR--- 1822

Query: 222  LKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNC 401
            +++ +  +IY    +   AGK IIF   APY+A   A I+F  A +  + RD L  Y N 
Sbjct: 1823 IRHVQIRVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACA-QQYSYRDMLNRYNNV 1877

Query: 402  IPESTTGLEQYF 437
               +++G+EQYF
Sbjct: 1878 CTPNSSGIEQYF 1889

[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
 Frame = +3

Query: 60  VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 224
           +CGP +     E  F+VST PL+    G   H  I+Y   GVGRLP+++WV  F  S+  
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622

Query: 225 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 404
             A+       +R+   +GK I F    PYVAN  A I F   +           Y++ I
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667

Query: 405 PESTTGLEQYFDAPIPQANVGQFYF 479
                    Y D  +P ++   FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685

[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
 Frame = +3

Query: 60   VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 224
            +CGP +     E  F+VST PL+    G   H  I+Y   GVGRLP+++WV  F  S+  
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009

Query: 225  KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 404
              A+       +R+   +GK I F    PYVAN  A I F   +           Y++ I
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054

Query: 405  PESTTGLEQYFDAPIPQANVGQFYF 479
                     Y D  +P ++   FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072