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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 298 bits (762), Expect = 3e-79
Identities = 142/191 (74%), Positives = 162/191 (84%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG GVG LP
Sbjct: 568 FMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLP 627
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
TK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ K+
Sbjct: 628 TKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKM 687
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE
Sbjct: 688 LIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE 747
Query: 543 KELPTLMLNRA 575
PTL+LN A
Sbjct: 748 -GFPTLILNEA 757
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 298 bits (762), Expect = 3e-79
Identities = 142/191 (74%), Positives = 162/191 (84%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG GVG LP
Sbjct: 2008 FMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLP 2067
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
TK WV+ FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ K+
Sbjct: 2068 TKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKM 2127
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE
Sbjct: 2128 LIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE 2187
Query: 543 KELPTLMLNRA 575
PTL+LN A
Sbjct: 2188 -GFPTLILNEA 2197
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 284 bits (727), Expect = 3e-75
Identities = 140/191 (73%), Positives = 160/191 (83%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G G+G LP
Sbjct: 568 FMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLP 627
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
TK WV FGK S LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+
Sbjct: 628 TKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKM 687
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE
Sbjct: 688 LIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE 747
Query: 543 KELPTLMLNRA 575
LPT +LN+A
Sbjct: 748 -GLPTAILNQA 757
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 284 bits (727), Expect = 3e-75
Identities = 140/191 (73%), Positives = 160/191 (83%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G G+G LP
Sbjct: 2010 FMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLP 2069
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
TK WV FGK S LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+
Sbjct: 2070 TKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKM 2129
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE
Sbjct: 2130 LIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE 2189
Query: 543 KELPTLMLNRA 575
LPT +LN+A
Sbjct: 2190 -GLPTAILNQA 2199
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 231 bits (588), Expect = 4e-59
Identities = 114/191 (59%), Positives = 138/191 (72%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FM S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGGVG LP
Sbjct: 567 FMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLP 625
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
T WV +FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+
Sbjct: 626 THQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKI 685
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
L ++ L HYRN IPES GL YFDAP+P A +G+ YF +GETYAAL +FK +VL
Sbjct: 686 LKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIV 745
Query: 543 KELPTLMLNRA 575
+LN A
Sbjct: 746 GPTNVQILNGA 756
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 231 bits (588), Expect = 4e-59
Identities = 114/191 (59%), Positives = 138/191 (72%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FM S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGGVG LP
Sbjct: 1993 FMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLP 2051
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
T WV +FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+
Sbjct: 2052 THQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKI 2111
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYE 542
L ++ L HYRN IPES GL YFDAP+P A +G+ YF +GETYAAL +FK +VL
Sbjct: 2112 LKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIV 2171
Query: 543 KELPTLMLNRA 575
+LN A
Sbjct: 2172 GPTNVQILNGA 2182
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 174 bits (441), Expect = 4e-42
Identities = 92/183 (50%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FMH S+ GN+ HF L V GP YKP + +VST PLK G G VP++ G G+G LP
Sbjct: 575 FMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLP 634
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
T WV F + + L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A KL
Sbjct: 635 TIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKL 694
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGY 539
L + AL YRN IPEST GLEQYFDA IPQA++ G FY + E+ + L + K V+G
Sbjct: 695 LEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGL 754
Query: 540 EKE 548
E
Sbjct: 755 TTE 757
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 174 bits (441), Expect = 4e-42
Identities = 92/183 (50%), Positives = 117/183 (63%), Gaps = 1/183 (0%)
Frame = +3
Query: 3 FMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGVGRLP 182
FMH S+ GN+ HF L V GP YKP + +VST PLK G G VP++ G G+G LP
Sbjct: 2065 FMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLP 2124
Query: 183 TKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKL 362
T WV F + + L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A KL
Sbjct: 2125 TIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKL 2184
Query: 363 LNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGY 539
L + AL YRN IPEST GLEQYFDA IPQA++ G FY + E+ + L + K V+G
Sbjct: 2185 LEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGL 2244
Query: 540 EKE 548
E
Sbjct: 2245 TTE 2247
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 79.3 bits (194), Expect = 2e-13
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Frame = +3
Query: 54 LGVCGPHY--KPCEEDFIVSTEPLKMG--ILGEHVPIKYGGGVGRLPTKNWVMSFGKSSS 221
+ V GP + + C++ F+VST PL G H+P++ G G+GR+P+++WV F +
Sbjct: 1766 IAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR--- 1822
Query: 222 LKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNC 401
+++ + +IY + AGK IIF APY+A A I+F A + + RD L Y N
Sbjct: 1823 IRHVQIRVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACA-QQYSYRDMLNRYNNV 1877
Query: 402 IPESTTGLEQYF 437
+++G+EQYF
Sbjct: 1878 CTPNSSGIEQYF 1889
[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=UPI0000163DCE
Length = 707
Score = 58.9 bits (141), Expect = 3e-07
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +3
Query: 60 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 224
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622
Query: 225 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 404
A+ +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667
Query: 405 PESTTGLEQYFDAPIPQANVGQFYF 479
Y D +P ++ FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685
[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=POL1_BRAV
Length = 2094
Score = 58.9 bits (141), Expect = 3e-07
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Frame = +3
Query: 60 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 224
+CGP + E F+VST PL+ G H I+Y GVGRLP+++WV F S+
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009
Query: 225 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 404
A+ +R+ +GK I F PYVAN A I F + Y++ I
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054
Query: 405 PESTTGLEQYFDAPIPQANVGQFYF 479
Y D +P ++ FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072