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[1][TOP] >UniRef100_UPI00019836CE PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019836CE Length = 1383 Score = 234 bits (598), Expect = 3e-60 Identities = 119/171 (69%), Positives = 144/171 (84%) Frame = +1 Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246 F ISGI+ +QL+VFLD C+SRY+ K+IEAGT IGAIGAHSIGEPGTQMTLKTFHFAGV Sbjct: 1004 FAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 1063 Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426 ASMNVTLGVPRI EIINGA I TPIITA LE ++N+ ARMVKGRIE+TTLGQVAKSIK Sbjct: 1064 ASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIK 1123 Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 +V TSR A + ++LD + I+ + L+IDSN V+ESIL+ ++KLK++ IK+L Sbjct: 1124 IVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVL 1174 [2][TOP] >UniRef100_A7NZA4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NZA4_VITVI Length = 1370 Score = 234 bits (598), Expect = 3e-60 Identities = 119/171 (69%), Positives = 144/171 (84%) Frame = +1 Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246 F ISGI+ +QL+VFLD C+SRY+ K+IEAGT IGAIGAHSIGEPGTQMTLKTFHFAGV Sbjct: 1004 FAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 1063 Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426 ASMNVTLGVPRI EIINGA I TPIITA LE ++N+ ARMVKGRIE+TTLGQVAKSIK Sbjct: 1064 ASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIK 1123 Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 +V TSR A + ++LD + I+ + L+IDSN V+ESIL+ ++KLK++ IK+L Sbjct: 1124 IVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVL 1174 [3][TOP] >UniRef100_B9GIK9 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9GIK9_POPTR Length = 1394 Score = 223 bits (567), Expect = 1e-56 Identities = 118/193 (61%), Positives = 144/193 (74%) Frame = +1 Query: 1 ENTKLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAI 180 EN K E +T KN ++SGI+ +QLEVFL CL RY +K+IE GT IGAI Sbjct: 1004 ENIKNVEGLTGIS----KNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAI 1059 Query: 181 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN 360 GA SIGEPGTQMTLKTFHFAGVASMN+T GVPRI EIINGA I TPIIT LE + N+N Sbjct: 1060 GAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVN 1119 Query: 361 IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQT 540 AR++KGRI+KT LGQVAKSIK+V TSRSA++ ++LD K I EA L++D+N V+E IL+T Sbjct: 1120 AARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILET 1179 Query: 541 GKLKLKEKEIKIL 579 K+K K + I +L Sbjct: 1180 PKIKRKLQRINVL 1192 [4][TOP] >UniRef100_B9T0Q9 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9T0Q9_RICCO Length = 1383 Score = 221 bits (562), Expect = 4e-56 Identities = 111/176 (63%), Positives = 140/176 (79%) Frame = +1 Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231 K + +I G+S RQ+EVF+ C++RY +K++E GT IGAIGA SIGEPGTQMTLKTF Sbjct: 990 KIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTF 1049 Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQV 411 HFAGVASMN+T GVPRI EIINGA I TPIITA LE + N+ AR+ KGRI+KT LGQV Sbjct: 1050 HFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKGRIQKTVLGQV 1109 Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 AKSIK+V TSRSA++ I+LD K I+ A L++D+N VKE+IL+T ++KLK + IK+L Sbjct: 1110 AKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVL 1165 [5][TOP] >UniRef100_UPI0001505876 NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding / zinc ion binding n=1 Tax=Arabidopsis thaliana RepID=UPI0001505876 Length = 1376 Score = 207 bits (526), Expect = 6e-52 Identities = 109/168 (64%), Positives = 134/168 (79%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 + SG++ +QLEVF+ IC+ RYR KKIEAGT IG IGA SIGEPGTQMTLKTFHFAGVASM Sbjct: 993 KASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASM 1052 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+T GVPRI EIIN + NI TP+I+A LE + AR VKGRIEKTTLGQVA+SI+V+ Sbjct: 1053 NITQGVPRINEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLM 1112 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 TS SA++ I LD KIIEEA L+I +VK SIL+T ++KL + +I++L Sbjct: 1113 TSTSASVRIILDNKIIEEACLSITPWSVKNSILKTPRIKLNDNDIRVL 1160 [6][TOP] >UniRef100_Q9LVH0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9LVH0_ARATH Length = 1383 Score = 197 bits (501), Expect = 5e-49 Identities = 104/159 (65%), Positives = 127/159 (79%) Frame = +1 Query: 103 LEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 282 ++VF+ IC+ RYR KKIEAGT IG IGA SIGEPGTQMTLKTFHFAGVASMN+T GVPRI Sbjct: 1009 MQVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRI 1068 Query: 283 MEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFI 462 EIIN + NI TP+I+A LE + AR VKGRIEKTTLGQVA+SI+V+ TS SA++ I Sbjct: 1069 NEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRI 1128 Query: 463 SLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 LD KIIEEA L+I +VK SIL+T ++KL + +I++L Sbjct: 1129 ILDNKIIEEACLSITPWSVKNSILKTPRIKLNDNDIRVL 1167 [7][TOP] >UniRef100_A9RSV5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA Length = 1397 Score = 197 bits (501), Expect = 5e-49 Identities = 103/172 (59%), Positives = 130/172 (75%), Gaps = 5/172 (2%) Frame = +1 Query: 79 ISGISRRQLE-----VFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243 ISG++ RQLE VFLD C+ RY K++E G +GA+GA SIGEPGTQMTLKTFHFAG Sbjct: 1017 ISGLTSRQLEICLLQVFLDTCIKRYHMKRVEPGAAVGAVGAQSIGEPGTQMTLKTFHFAG 1076 Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423 VASMN+TLGVPRI EIIN + NI TPIITA+L + ++ AR+VKGRIEKTTLG+VAKSI Sbjct: 1077 VASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKSI 1136 Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 K V + A + + LD K I+ L+I+S+TV +I+QT K+KLK I+I+ Sbjct: 1137 KTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLKHVNIRIV 1188 [8][TOP] >UniRef100_B9FFW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FFW1_ORYSJ Length = 1321 Score = 194 bits (492), Expect = 5e-48 Identities = 102/179 (56%), Positives = 130/179 (72%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 +H + ISGIS +QL+VFLD CLSRY KKIEAG IGAIGA SIGEPGTQMTL Sbjct: 930 RHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTL 989 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMNVTLGVPRI EIIN A I TPIITA L ++ ++ AR+VKG +EK L Sbjct: 990 KTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVL 1049 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 G+VA++IK+V S L + LD + IE ++ I +++V+ SIL K+KLK + ++++ Sbjct: 1050 GEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVI 1108 [9][TOP] >UniRef100_Q7X881 DNA-directed RNA polymerase n=3 Tax=Oryza sativa RepID=Q7X881_ORYSJ Length = 1383 Score = 194 bits (492), Expect = 5e-48 Identities = 102/179 (56%), Positives = 130/179 (72%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 +H + ISGIS +QL+VFLD CLSRY KKIEAG IGAIGA SIGEPGTQMTL Sbjct: 992 RHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTL 1051 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMNVTLGVPRI EIIN A I TPIITA L ++ ++ AR+VKG +EK L Sbjct: 1052 KTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVL 1111 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 G+VA++IK+V S L + LD + IE ++ I +++V+ SIL K+KLK + ++++ Sbjct: 1112 GEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVI 1170 [10][TOP] >UniRef100_C5YBD9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5YBD9_SORBI Length = 1391 Score = 192 bits (488), Expect = 2e-47 Identities = 100/167 (59%), Positives = 127/167 (76%) Frame = +1 Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 ISGIS +QL+VFLD CLSRY+ KKIEAG IGAIGA SIGEPGTQMTLKTFHFAGVASMN Sbjct: 1011 ISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1070 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 VTLGVPRI EIIN A I TPIITA L + ++ AR+VKG +EK LG+VA +I++V Sbjct: 1071 VTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLK 1130 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 S L + LD ++IE ++ I +++V+ SIL K+KLK + ++++ Sbjct: 1131 SSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVI 1177 [11][TOP] >UniRef100_Q86AQ5 DNA-directed RNA polymerase III subunit rpc1 n=1 Tax=Dictyostelium discoideum RepID=RPC1_DICDI Length = 1450 Score = 188 bits (478), Expect = 2e-46 Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 6/186 (3%) Frame = +1 Query: 31 EDDPKHLKNLN------NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHS 192 E + K LK L + + +I I++ Q+E+FLDICL +Y +IE GT +GAIGA S Sbjct: 1051 EKESKRLKLLGERFANEHVVNQIHRITKTQIELFLDICLDKYSRARIEPGTAVGAIGAQS 1110 Query: 193 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARM 372 IGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN A NI TPIITA L D +I AR+ Sbjct: 1111 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITASLNCDYDIRSARI 1170 Query: 373 VKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 V GRIEKTTLG VA IK V L I +D+ ++ L I+S T+ +SI T LK Sbjct: 1171 VAGRIEKTTLGHVATHIKEVVKRAGCYLSIKIDKNFVDSLQLEINSKTISQSIASTKGLK 1230 Query: 553 LKEKEI 570 LK ++I Sbjct: 1231 LKPEQI 1236 [12][TOP] >UniRef100_C1E5P6 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1E5P6_9CHLO Length = 1479 Score = 184 bits (468), Expect = 3e-45 Identities = 92/162 (56%), Positives = 118/162 (72%) Frame = +1 Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 G+++ QL+ FL+ C+ +Y K+IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVT Sbjct: 1014 GVTKAQLDEFLERCVRKYSAKRIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVT 1073 Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444 LGVPRI EIIN A NI TPIITA LE DDN+ AR+VKGR+EKTTLG+V K I VV Sbjct: 1074 LGVPRIKEIINAAKNISTPIITATLECDDNVKAARVVKGRVEKTTLGEVCKFIDVVYNPS 1133 Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570 + + + LD +I L++ +V+ S++ KLKLK + Sbjct: 1134 ACYVEVCLDPAVISALQLDVTVESVRHSLITAPKLKLKANTV 1175 [13][TOP] >UniRef100_C1MN08 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MN08_9CHLO Length = 1591 Score = 182 bits (462), Expect = 2e-44 Identities = 92/162 (56%), Positives = 117/162 (72%) Frame = +1 Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 G++ QL+ FL C+ +Y K+IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMN+T Sbjct: 1163 GVTAAQLDEFLARCVQKYDAKRIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNIT 1222 Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444 LGVPRI EIIN + NI TPIITA L DD++ AR+VKGR+EKTTLG+V K I VV Sbjct: 1223 LGVPRIKEIINASKNISTPIITATLACDDDVKAARVVKGRVEKTTLGEVCKHIHVVFDPT 1282 Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570 + L ++LD +I L++ TVK ++L T KLKLK + Sbjct: 1283 ACYLEVALDPDVIRALQLDVTVATVKRALLSTTKLKLKPNRV 1324 [14][TOP] >UniRef100_Q01DV6 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q01DV6_OSTTA Length = 1406 Score = 177 bits (448), Expect = 7e-43 Identities = 87/163 (53%), Positives = 116/163 (71%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 IS QL FLD+C+ +Y K+IE GT +GA+GA SIGEPGTQMTLKTFHFAGVASMN+TL Sbjct: 1014 ISESQLNTFLDVCMQKYNAKRIEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITL 1073 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + +I TPII+A L +D ++ AR+VKGR+EKTTLG++ +V S Sbjct: 1074 GVPRIKEIINASKSISTPIISASLMSDRDVKAARVVKGRVEKTTLGEICSDAGIVVRSHE 1133 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 L + LD + I + L++ +T + ++L KLKLK + + I Sbjct: 1134 VYLELVLDLEAINQLQLDVTIHTARTAVLAAPKLKLKPQHVLI 1176 [15][TOP] >UniRef100_A4RTE2 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RTE2_OSTLU Length = 1395 Score = 177 bits (448), Expect = 7e-43 Identities = 89/163 (54%), Positives = 117/163 (71%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S RQ++ FLD C +Y K+IE GT +GAIGA SIGEPGTQMTLKTFHFAGVASMN+TL Sbjct: 1015 MSDRQMKAFLDACARKYTEKRIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITL 1074 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + NI TPIITA L +D ++ AR+VKGR+EKTTLG++ I +V Sbjct: 1075 GVPRIKEIINASKNISTPIITASLMSDRDVKAARVVKGRVEKTTLGEICSEINIVVRPHD 1134 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 L + LD + I + L++ ++V+ ++L KLKLK + + I Sbjct: 1135 LYLELMLDMEAINQLQLDVTIHSVRLAVLGAPKLKLKPQHVLI 1177 [16][TOP] >UniRef100_Q45NI8 RNA polymerase III largest subunit n=1 Tax=Medicago sativa RepID=Q45NI8_MEDSA Length = 147 Score = 174 bits (442), Expect = 3e-42 Identities = 89/104 (85%), Positives = 96/104 (92%) Frame = +1 Query: 1 ENTKLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAI 180 +NT LT++I EDD +LKN F+P+ISGISRRQLEVFLDICLSRYR KKIEAGTPIGAI Sbjct: 47 KNTTLTKSIGEDDSSNLKN---FLPKISGISRRQLEVFLDICLSRYRLKKIEAGTPIGAI 103 Query: 181 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNI 312 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINGASNI Sbjct: 104 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGASNI 147 [17][TOP] >UniRef100_Q6CB20 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CB20_YARLI Length = 1483 Score = 171 bits (432), Expect = 5e-41 Identities = 86/169 (50%), Positives = 117/169 (69%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + ++ IS R ++ FL CL +Y+ ++E GT +GAIGA SIGEPGTQMTLKTFHFAGVA Sbjct: 1067 VNQVCRISHRMVDTFLQACLRKYQKAQVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1126 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMNVTLGVPRI EIIN + I TPIIT +L + + AR+VKGRIEKT LG +A I+ Sbjct: 1127 SMNVTLGVPRIKEIINASKAISTPIITTVLNNETELQAARIVKGRIEKTLLGDIAHYIQD 1186 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + A++ + +D I+ L ID + ++E+I++ KLKLK ++ I Sbjct: 1187 EYSYAKASVRVRIDFNTIDHLLLEIDMDQIREAIIKAPKLKLKPGQVSI 1235 [18][TOP] >UniRef100_A5E7R0 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E7R0_LODEL Length = 1450 Score = 168 bits (425), Expect = 3e-40 Identities = 88/172 (51%), Positives = 119/172 (69%) Frame = +1 Query: 64 NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243 N I ++ IS++ +++FL CL +Y K+EAGT +GAIGA SIGEPGTQMTLKTFHFAG Sbjct: 1048 NAIDQLMKISKKTVKIFLTQCLYKYSRAKVEAGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1107 Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423 VASMNVTLGVPRI EIIN + I TPII A+L +D+ AR+ KGRIEKT+L V+ I Sbjct: 1108 VASMNVTLGVPRIKEIINASKTISTPIINAVLVNEDDEIAARVAKGRIEKTSLKDVSIYI 1167 Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 + V A L I +D IE+ L +D + + E+I + KLK+ + ++ ++ Sbjct: 1168 EDVYKDNLAFLSIKVDLDSIEKLQLELDISNIAEAICKAPKLKISQSDVSVM 1219 [19][TOP] >UniRef100_A9VCM2 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9VCM2_MONBE Length = 1414 Score = 167 bits (422), Expect = 7e-40 Identities = 87/187 (46%), Positives = 119/187 (63%) Frame = +1 Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198 E EDDP +NN + ++R + +F++ L ++R +E GT +GAIGA SIG Sbjct: 1007 EAPAEDDPAKRHLVNNLM----SVTREDMRIFVEKALFKFRRTVVEPGTAVGAIGAQSIG 1062 Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378 EPGTQMTLKTFHFAGVA+MNVTLGVPRI EIIN A NI TP+ITA LE D + AR VK Sbjct: 1063 EPGTQMTLKTFHFAGVAAMNVTLGVPRIKEIINAAKNISTPVITAKLENDREESFARQVK 1122 Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 R+E TLG+VA VV + + L+ K+I+ +L + NT+ +SI + K+K Sbjct: 1123 ARLETLTLGEVADHFDVVCNEDGGYVRVKLNLKVIQRKHLEVTMNTIIDSIAASRLTKIK 1182 Query: 559 EKEIKIL 579 + + ++ Sbjct: 1183 HEHLSVM 1189 [20][TOP] >UniRef100_UPI00017927B1 PREDICTED: similar to AGAP004703-PA n=1 Tax=Acyrthosiphon pisum RepID=UPI00017927B1 Length = 1355 Score = 166 bits (421), Expect = 9e-40 Identities = 91/175 (52%), Positives = 114/175 (65%) Frame = +1 Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231 K LN + +I I+ QL F CL++Y IE GTP+GAI A SIGEPGTQMTLKTF Sbjct: 947 KWLNLEVSKIQRITSTQLIKFYVTCLTKYMAAVIEPGTPVGAIAAQSIGEPGTQMTLKTF 1006 Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQV 411 HFAGVASMN+T GVPRI EIIN + NI TPIITA LE D + AR+VK RIE+TTL +V Sbjct: 1007 HFAGVASMNITQGVPRIKEIINSSKNISTPIITAYLENDKDKEFARIVKARIEQTTLTEV 1066 Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 I VV S L I +D I+ L + T+++SIL T ++ +K ++ I Sbjct: 1067 CSFIDVVLDSAECYLLIHIDMNRIKLLQLEVTIETIRDSILSTPRIGIKANQVNI 1121 [21][TOP] >UniRef100_C4Y380 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y380_CLAL4 Length = 1491 Score = 165 bits (418), Expect = 2e-39 Identities = 90/186 (48%), Positives = 121/186 (65%) Frame = +1 Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198 + + ++DP + +N + IS+ +E FL CL +Y ++E GT +GAIGAHSIG Sbjct: 1071 DMVLDEDPVSINAINQLMK----ISQTCVEEFLKQCLYKYLRARVEPGTAVGAIGAHSIG 1126 Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378 EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII +L D++ AR+VK Sbjct: 1127 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIINTVLVNDEDEVAARVVK 1186 Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 GRIEKT L VA ++ V + A L I +D K IE+ L + + ++++I KLK+ Sbjct: 1187 GRIEKTLLRDVAFFVEDVYKNDMAYLSIKIDLKTIEKLQLELTMDNIRQAIANAPKLKIL 1246 Query: 559 EKEIKI 576 E+ + Sbjct: 1247 NSEVSV 1252 [22][TOP] >UniRef100_UPI000151B46E DNA-directed RNA polymerase III largest subunit n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B46E Length = 1379 Score = 163 bits (412), Expect = 1e-38 Identities = 91/183 (49%), Positives = 118/183 (64%) Frame = +1 Query: 28 TEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPG 207 ++DDP L +N ++S IS + + FLD C+ +Y K+E GT +GAIGA SIGEPG Sbjct: 963 SKDDPVQLNAVN----QLSKISLKAINKFLDQCIYKYSRAKVEPGTAVGAIGAQSIGEPG 1018 Query: 208 TQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRI 387 TQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII +L DD+ AR+VKGRI Sbjct: 1019 TQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINGVLVNDDDEIAARVVKGRI 1078 Query: 388 EKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567 EKT L VA I+ V A L + +D IE+ L + ++ +I+ KLK+ + Sbjct: 1079 EKTLLEDVAFFIEDVYKDNLAYLSVKIDLDTIEKLQLELTIESIAHAIVTAPKLKIVASD 1138 Query: 568 IKI 576 + I Sbjct: 1139 VSI 1141 [23][TOP] >UniRef100_A5DM42 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DM42_PICGU Length = 1379 Score = 163 bits (412), Expect = 1e-38 Identities = 91/183 (49%), Positives = 118/183 (64%) Frame = +1 Query: 28 TEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPG 207 ++DDP L +N ++S IS + + FLD C+ +Y K+E GT +GAIGA SIGEPG Sbjct: 963 SKDDPVQLNAVN----QLSKISLKAINKFLDQCIYKYSRAKVEPGTAVGAIGAQSIGEPG 1018 Query: 208 TQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRI 387 TQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII +L DD+ AR+VKGRI Sbjct: 1019 TQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINGVLVNDDDEIAARVVKGRI 1078 Query: 388 EKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567 EKT L VA I+ V A L + +D IE+ L + ++ +I+ KLK+ + Sbjct: 1079 EKTLLEDVAFFIEDVYKDNLAYLSVKIDLDTIEKLQLELTIESIAHAIVTAPKLKIVASD 1138 Query: 568 IKI 576 + I Sbjct: 1139 VSI 1141 [24][TOP] >UniRef100_UPI0001923A96 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC1, partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923A96 Length = 730 Score = 162 bits (411), Expect = 1e-38 Identities = 85/151 (56%), Positives = 106/151 (70%) Frame = +1 Query: 124 CLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGA 303 C RY + E GT +GA+ A SIGEPGTQMTLKTFHFAGVA+MN+TLGVPRI EIIN + Sbjct: 448 CAKRYLHARCEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVATMNITLGVPRIKEIINAS 507 Query: 304 SNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 I TPIITA LE DD+I AR VKGR+EKTTLG+V + I+ V T + L I +D + I Sbjct: 508 KKISTPIITAPLEVDDDIEYARSVKGRVEKTTLGEVCEYIEEVFTPDACYLLIKIDSQRI 567 Query: 484 EEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 L ID+N +K ++ + KLKLK + + I Sbjct: 568 NLLKLEIDANAIKYALCISPKLKLKPQFVSI 598 [25][TOP] >UniRef100_A7SJ34 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis RepID=A7SJ34_NEMVE Length = 1398 Score = 160 bits (405), Expect = 7e-38 Identities = 82/177 (46%), Positives = 119/177 (67%) Frame = +1 Query: 46 HLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLK 225 H N + ++ + QL++FL +C +Y ++E G+ +GAI A SIGEPGTQMTLK Sbjct: 991 HSITSNKIVDYVNRCTETQLKLFLSMCREKYLRARMEPGSAVGAICAQSIGEPGTQMTLK 1050 Query: 226 TFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLG 405 TFHFAGVASMN+TLGVPRI EIIN + I TPII+A L+ D + +AR VKGRIE+T LG Sbjct: 1051 TFHFAGVASMNITLGVPRIKEIINASRKISTPIISAQLQDDRDQELARAVKGRIERTLLG 1110 Query: 406 QVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 +V + I+ V + L I LD + I L +D++T++ +I + KL+L + ++++ Sbjct: 1111 EVTEYIEEVFLPDNCYLLIKLDTERIRLLKLEVDADTIQAAICSSRKLRLNQSQVRV 1167 [26][TOP] >UniRef100_Q756K2 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii RepID=Q756K2_ASHGO Length = 1459 Score = 160 bits (404), Expect = 9e-38 Identities = 86/170 (50%), Positives = 111/170 (65%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + ++ IS + + FLDI +S+YR K+E GT +GAIGAHSIGEPGTQMTLKTFHFAGVA Sbjct: 1055 VNQLCKISSKLVRTFLDIAISKYRKAKVEPGTAVGAIGAHSIGEPGTQMTLKTFHFAGVA 1114 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMNVTLGVPRI EIIN + I TPII A L DD+ AR+VKGR+EKT L V I+ Sbjct: 1115 SMNVTLGVPRIKEIINASKVISTPIINATLVNDDDERAARVVKGRVEKTLLSDVIFYIQD 1174 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 V + L + +D IE+ L + + +I KLK+ ++ I+ Sbjct: 1175 VYRDNMSFLQVKVDLATIEKLQLELTVEDIAIAITSAPKLKISTGDVSIV 1224 [27][TOP] >UniRef100_B9WF61 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WF61_CANDC Length = 1448 Score = 160 bits (404), Expect = 9e-38 Identities = 86/172 (50%), Positives = 114/172 (66%) Frame = +1 Query: 61 NNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFA 240 +N I ++S IS ++ FL+ CL +Y ++E GT +GAIGA SIGEPGTQMTLKTFHFA Sbjct: 1045 SNAIDQLSKISSNAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIGEPGTQMTLKTFHFA 1104 Query: 241 GVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKS 420 GVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ KGRIEKT L VA Sbjct: 1105 GVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAKGRIEKTLLEDVAFY 1164 Query: 421 IKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 I+ V A L I +D + I++ L ++ + +I KLK+ + ++ + Sbjct: 1165 IEDVYKDNLAYLSIKVDLETIDKLQLELNLENIAVAIANAPKLKISQSDVSV 1216 [28][TOP] >UniRef100_UPI00003BE6A5 hypothetical protein DEHA0G13849g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BE6A5 Length = 1457 Score = 159 bits (402), Expect = 1e-37 Identities = 85/169 (50%), Positives = 112/169 (66%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 I ++S +S + FL+ C+ +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA Sbjct: 1048 INQLSKVSANSINKFLEQCIYKYSRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1107 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMNVTLGVPRI EIIN + I TPII ++L DD+ AR+VKGR+EKT L VA I+ Sbjct: 1108 SMNVTLGVPRIKEIINASKVISTPIINSVLVNDDDEIAARVVKGRVEKTLLEDVAYFIED 1167 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 V + A L I +D IE+ L ++ ++ SI KLK+ ++ + Sbjct: 1168 VYKNNMAYLSIKIDLNTIEKLQLELNIESIAHSIANAPKLKILAGDVSV 1216 [29][TOP] >UniRef100_Q5A164 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5A164_CANAL Length = 1448 Score = 159 bits (402), Expect = 1e-37 Identities = 87/186 (46%), Positives = 121/186 (65%) Frame = +1 Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198 E + ++D +K ++ ++S IS + ++ FL+ CL +Y ++E GT +GAIGA SIG Sbjct: 1035 EIVMDEDAVKVKAID----QLSKISSKAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIG 1090 Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378 EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ K Sbjct: 1091 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAK 1150 Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 GRIEKT L VA I+ V A L I +D + I++ L ++ + +I KLK+ Sbjct: 1151 GRIEKTLLEDVAFYIEDVYKDNLAYLSIKIDLETIDKLQLELNLENIAVAIANAPKLKIA 1210 Query: 559 EKEIKI 576 + ++ + Sbjct: 1211 QSDVSV 1216 [30][TOP] >UniRef100_Q5A0Z3 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5A0Z3_CANAL Length = 1448 Score = 159 bits (402), Expect = 1e-37 Identities = 87/186 (46%), Positives = 121/186 (65%) Frame = +1 Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198 E + ++D +K ++ ++S IS + ++ FL+ CL +Y ++E GT +GAIGA SIG Sbjct: 1035 EIVMDEDAVKVKAID----QLSKISSKAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIG 1090 Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378 EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ K Sbjct: 1091 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAK 1150 Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 GRIEKT L VA I+ V A L I +D + I++ L ++ + +I KLK+ Sbjct: 1151 GRIEKTLLEDVAFYIEDVYKDNLAYLSIKIDLETIDKLQLELNLENIAVAIANAPKLKIA 1210 Query: 559 EKEIKI 576 + ++ + Sbjct: 1211 QSDVSV 1216 [31][TOP] >UniRef100_C4YGE6 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=C4YGE6_CANAL Length = 1448 Score = 159 bits (402), Expect = 1e-37 Identities = 87/186 (46%), Positives = 121/186 (65%) Frame = +1 Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198 E + ++D +K ++ ++S IS + ++ FL+ CL +Y ++E GT +GAIGA SIG Sbjct: 1035 EIVMDEDTVKVKAID----QLSKISSKAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIG 1090 Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378 EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ K Sbjct: 1091 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAK 1150 Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 GRIEKT L VA I+ V A L I +D + I++ L ++ + +I KLK+ Sbjct: 1151 GRIEKTLLEDVAFYIEDVYKDNLAYLSIKIDLETIDKLQLELNLENIAVAIANAPKLKIA 1210 Query: 559 EKEIKI 576 + ++ + Sbjct: 1211 QSDVSV 1216 [32][TOP] >UniRef100_Q6BI69 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Debaryomyces hansenii RepID=RPC1_DEBHA Length = 1457 Score = 159 bits (402), Expect = 1e-37 Identities = 85/169 (50%), Positives = 112/169 (66%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 I ++S +S + FL+ C+ +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA Sbjct: 1048 INQLSKVSANSINKFLEQCIYKYSRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1107 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMNVTLGVPRI EIIN + I TPII ++L DD+ AR+VKGR+EKT L VA I+ Sbjct: 1108 SMNVTLGVPRIKEIINASKVISTPIINSVLVNDDDEIAARVVKGRVEKTLLEDVAYFIED 1167 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 V + A L I +D IE+ L ++ ++ SI KLK+ ++ + Sbjct: 1168 VYKNNMAYLSIKIDLNTIEKLQLELNIESIAHSIANAPKLKILAGDVSV 1216 [33][TOP] >UniRef100_UPI000186E437 DNA-directed RNA polymerase III largest subunit, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E437 Length = 1364 Score = 159 bits (401), Expect = 2e-37 Identities = 85/171 (49%), Positives = 115/171 (67%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 ++L ++ I +I ++ Q+ F IC +Y K+EAGT +GA+ A SIGEPGTQMTL Sbjct: 992 RNLSDIPKAIIQIERLTVSQIVEFFQICRKKYLRAKVEAGTAVGALAAQSIGEPGTQMTL 1051 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMN+T GVPRI EIIN + I TPIITA LE D + AR VKGRIEKTTL Sbjct: 1052 KTFHFAGVASMNITQGVPRIKEIINASKKISTPIITAYLENDSDAEFARRVKGRIEKTTL 1111 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKL 555 G++++ I+ V + + LD I+ L +D+N++K + L T +LK+ Sbjct: 1112 GEISEYIEEVFLPDDFFIIVKLDVDRIKLLKLEVDANSIKYT-LCTARLKV 1161 [34][TOP] >UniRef100_UPI0000D57400 PREDICTED: similar to AGAP004703-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D57400 Length = 1390 Score = 159 bits (401), Expect = 2e-37 Identities = 90/169 (53%), Positives = 111/169 (65%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + I ++ QL FL IC S+Y IE GT +GA+ A SIGEPGTQMTLKTFHFAGVA Sbjct: 1003 VKEIERLTCSQLVTFLQICGSKYTRSIIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVA 1062 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMN+T GVPRI EIIN + +I TPIITA L +I AR VK RIE+TTLG+VA I Sbjct: 1063 SMNITQGVPRIKEIINASKDISTPIITASLTNPRDIGFAREVKARIERTTLGEVATFIDE 1122 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + T L I L+ I+ L I++ TV+ SI T KLKLK E+++ Sbjct: 1123 IYTQYDCFLLIQLNYDRIKLLKLEINAETVRYSIC-TSKLKLKPNEVRV 1170 [35][TOP] >UniRef100_Q5KFV9 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KFV9_CRYNE Length = 1466 Score = 159 bits (401), Expect = 2e-37 Identities = 89/184 (48%), Positives = 116/184 (63%) Frame = +1 Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204 + DDP + L N + ++ QL FL+ C RY KIE G+ +GA+GA SIGEP Sbjct: 1053 LNSDDPAVQRVLEN----ANKVTEAQLSSFLENCRIRYLRAKIEPGSTVGAVGAQSIGEP 1108 Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384 GTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII A L ++ AR+VKGR Sbjct: 1109 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIIAAELAIPESETAARIVKGR 1168 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 IEKT LG +A I+ T+ +A + + +D + L I ++K ++++ KLK+ E Sbjct: 1169 IEKTVLGDIAAVIEESWTNANAYIEVHIDMDAVRRLQLEISLESIKWALVRANKLKIPEG 1228 Query: 565 EIKI 576 I I Sbjct: 1229 SIHI 1232 [36][TOP] >UniRef100_Q55QA7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q55QA7_CRYNE Length = 1466 Score = 159 bits (401), Expect = 2e-37 Identities = 89/184 (48%), Positives = 116/184 (63%) Frame = +1 Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204 + DDP + L N + ++ QL FL+ C RY KIE G+ +GA+GA SIGEP Sbjct: 1053 LNSDDPAVQRVLEN----ANKVTEAQLSSFLENCRIRYLRAKIEPGSTVGAVGAQSIGEP 1108 Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384 GTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII A L ++ AR+VKGR Sbjct: 1109 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIIAAELAIPESETAARIVKGR 1168 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 IEKT LG +A I+ T+ +A + + +D + L I ++K ++++ KLK+ E Sbjct: 1169 IEKTVLGDIAAVIEESWTNANAYIEVHIDMDAVRRLQLEISLESIKWALVRANKLKIPEG 1228 Query: 565 EIKI 576 I I Sbjct: 1229 SIHI 1232 [37][TOP] >UniRef100_A7TNS6 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TNS6_VANPO Length = 1460 Score = 158 bits (399), Expect = 3e-37 Identities = 81/170 (47%), Positives = 116/170 (68%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + ++ I+ + +E FL+I +S+YR ++E GT +GAIGA SIGEPGTQMTLKTFHFAGVA Sbjct: 1056 VEKLCKITEKTVEKFLEIAMSKYRRARVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1115 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGRIEKT L VA ++ Sbjct: 1116 SMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDKRAARVVKGRIEKTLLSDVAYYVQD 1175 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 V + L + +D I++ L + + ++ + KLK++ +++I+ Sbjct: 1176 VYKDNLSFLEVKIDLSTIDKLQLELTIEDIAVALTRAPKLKIQTTDVQIV 1225 [38][TOP] >UniRef100_A4IHM8 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis RepID=A4IHM8_XENTR Length = 1390 Score = 157 bits (398), Expect = 4e-37 Identities = 84/167 (50%), Positives = 116/167 (69%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1001 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1060 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + NI TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1061 NITLGVPRIKEIINASKNISTPIITAHLDIDDDADFARLVKGRIEKTLLGEISEYIEEVF 1120 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 L + L + I L +++ TV+ SI + KL++K +I + Sbjct: 1121 LPDDCFLLVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDIAV 1166 [39][TOP] >UniRef100_C4R7G6 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R7G6_PICPG Length = 1460 Score = 157 bits (398), Expect = 4e-37 Identities = 86/186 (46%), Positives = 122/186 (65%) Frame = +1 Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198 E+ ++ P H +++ I ++ I+ + FL++ ++Y K+E GT +GAIGA SIG Sbjct: 1036 ESFVDESPDH--SVSILINQLYRITEAAVTKFLELSATKYNRAKVEPGTAVGAIGAQSIG 1093 Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378 EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L +D+ AR+VK Sbjct: 1094 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKTISTPIINAVLVNEDDERAARVVK 1153 Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 GRIEKT L V I+ V A L + +D + IE L ++ + ++ +I++ KLKL Sbjct: 1154 GRIEKTILQDVVYYIQDVYKENQAYLQVKVDLETIERLQLELNIDEIRLAIVKAPKLKLA 1213 Query: 559 EKEIKI 576 +++ I Sbjct: 1214 LEDVII 1219 [40][TOP] >UniRef100_UPI00015A5DDB PREDICTED: im:7139382 n=1 Tax=Danio rerio RepID=UPI00015A5DDB Length = 1390 Score = 157 bits (396), Expect = 7e-37 Identities = 86/180 (47%), Positives = 120/180 (66%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 +PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM Sbjct: 996 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1048 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPII+A L+T+D+ + AR+VKGRIEKT Sbjct: 1049 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIISANLDTNDDPDFARLVKGRIEKT 1108 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 LG++++ I+ V + + L I L +++ TV+ SI T KL++K ++++ Sbjct: 1109 LLGEISEYIEEVFLPDDTFILVKLSLDRIRLLRLEVNAETVRYSIC-TSKLRVKPGDVQV 1167 [41][TOP] >UniRef100_UPI00015B5AFA PREDICTED: hypothetical protein n=1 Tax=Nasonia vitripennis RepID=UPI00015B5AFA Length = 1372 Score = 156 bits (395), Expect = 1e-36 Identities = 89/180 (49%), Positives = 114/180 (63%), Gaps = 2/180 (1%) Frame = +1 Query: 43 KHLKNLNN--FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 +H+K+ +N I ++ QL F+ C +Y KIE GT +GA+ A SIGEPGTQM Sbjct: 973 QHIKSNDNQPVYKYIERLTVSQLAEFIHTCKEKYMKAKIEPGTAVGALAAQSIGEPGTQM 1032 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVASMN+T GVPRI EIIN I TPIITA LE D + AR VKGRIEKT Sbjct: 1033 TLKTFHFAGVASMNITQGVPRIKEIINANPKISTPIITAALENDTDPEFARRVKGRIEKT 1092 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 TLG++ + I+ V L + +D ++ L +D N+++ S L T KLKL K + I Sbjct: 1093 TLGEITEYIEEVYLPDDCFLLLKIDIDRVKLLKLEVDVNSIRYS-LCTSKLKLNPKNVVI 1151 [42][TOP] >UniRef100_UPI0000DA3EBF PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Rattus norvegicus RepID=UPI0000DA3EBF Length = 1390 Score = 156 bits (395), Expect = 1e-36 Identities = 82/167 (49%), Positives = 116/167 (69%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+R Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITRTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDMDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167 [43][TOP] >UniRef100_UPI0000DA3DE9 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=2 Tax=Rattus norvegicus RepID=UPI0000DA3DE9 Length = 1362 Score = 156 bits (395), Expect = 1e-36 Identities = 82/167 (49%), Positives = 116/167 (69%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+R Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITRTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDMDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167 [44][TOP] >UniRef100_Q5RK26 Polr3a protein (Fragment) n=1 Tax=Rattus norvegicus RepID=Q5RK26_RAT Length = 491 Score = 156 bits (395), Expect = 1e-36 Identities = 82/167 (49%), Positives = 116/167 (69%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+R Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 103 QLDRITRTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 162 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 163 NITLGVPRIKEIINASKAISTPIITAQLDMDDDADYARLVKGRIEKTLLGEISEYIEEVF 222 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 223 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 268 [45][TOP] >UniRef100_C7GMM0 Rpo31p n=1 Tax=Saccharomyces cerevisiae JAY291 RepID=C7GMM0_YEAS2 Length = 1460 Score = 156 bits (395), Expect = 1e-36 Identities = 82/175 (46%), Positives = 115/175 (65%) Frame = +1 Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234 N+ + ++ IS + + FL+I L +YR ++E GT IGAIGA SIGEPGTQMTLKTFH Sbjct: 1051 NVKTSVSQLYRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPGTQMTLKTFH 1110 Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414 FAGVASMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L VA Sbjct: 1111 FAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVA 1170 Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 ++ V + + + +D I++ L + + +I + KLK++ ++ I+ Sbjct: 1171 FYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIEDIAVAITRASKLKIQASDVNII 1225 [46][TOP] >UniRef100_B3LJF9 DNA-directed RNA polymerase n=3 Tax=Saccharomyces cerevisiae RepID=B3LJF9_YEAS1 Length = 1460 Score = 156 bits (395), Expect = 1e-36 Identities = 82/175 (46%), Positives = 115/175 (65%) Frame = +1 Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234 N+ + ++ IS + + FL+I L +YR ++E GT IGAIGA SIGEPGTQMTLKTFH Sbjct: 1051 NVKTSVSQLYRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPGTQMTLKTFH 1110 Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414 FAGVASMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L VA Sbjct: 1111 FAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVA 1170 Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 ++ V + + + +D I++ L + + +I + KLK++ ++ I+ Sbjct: 1171 FYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIEDIAVAITRASKLKIQASDVNII 1225 [47][TOP] >UniRef100_P04051 DNA-directed RNA polymerase III subunit RPC1 n=2 Tax=Saccharomyces cerevisiae RepID=RPC1_YEAST Length = 1460 Score = 156 bits (395), Expect = 1e-36 Identities = 82/175 (46%), Positives = 115/175 (65%) Frame = +1 Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234 N+ + ++ IS + + FL+I L +YR ++E GT IGAIGA SIGEPGTQMTLKTFH Sbjct: 1051 NVKTSVSQLYRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPGTQMTLKTFH 1110 Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414 FAGVASMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L VA Sbjct: 1111 FAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVA 1170 Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 ++ V + + + +D I++ L + + +I + KLK++ ++ I+ Sbjct: 1171 FYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIEDIAVAITRASKLKIQASDVNII 1225 [48][TOP] >UniRef100_UPI00016E6B79 UPI00016E6B79 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E6B79 Length = 1390 Score = 156 bits (394), Expect = 1e-36 Identities = 86/180 (47%), Positives = 119/180 (66%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 +PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM Sbjct: 996 EPKVLYQLDRITPT-------QLERFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1048 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT Sbjct: 1049 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1108 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 LG++++ I+ V + + L + I L +++ TV+ SI + KL++K +I + Sbjct: 1109 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDIAV 1167 [49][TOP] >UniRef100_A3GEY3 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3GEY3_PICST Length = 1448 Score = 156 bits (394), Expect = 1e-36 Identities = 85/171 (49%), Positives = 112/171 (65%) Frame = +1 Query: 64 NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243 N + ++ IS + +E FL+ L +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAG Sbjct: 1047 NAVDQLLKISSKTIEKFLEQSLYKYSKAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1106 Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423 VASMNVTLGVPRI EIIN + I TPII ++L DD+ AR+VKGR+EKT L VA I Sbjct: 1107 VASMNVTLGVPRIKEIINASKTISTPIINSVLVNDDDEIAARVVKGRVEKTLLKDVAFFI 1166 Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + V + A L I +D IE+ L + + + +I KLK+ ++ + Sbjct: 1167 EDVYKNEMAYLSIKIDMSTIEKLQLELTIDDIVTAIHNAPKLKISPGDVSV 1217 [50][TOP] >UniRef100_Q4P157 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4P157_USTMA Length = 1400 Score = 155 bits (392), Expect = 2e-36 Identities = 82/156 (52%), Positives = 108/156 (69%) Frame = +1 Query: 112 FLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEI 291 FL+ C +Y KIE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EI Sbjct: 1033 FLEQCYIKYMKAKIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1092 Query: 292 INGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLD 471 IN A I TPII A L ++ + AR+VKGRIEKT LG +A I+ ++ L + +D Sbjct: 1093 INAAKVINTPIIEAKLVSEKSERAARIVKGRIEKTYLGDIASVIEEAWAAQYTYLGVHID 1152 Query: 472 EKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 + I++ L I N +K +I+ KLK+KE+ + ++ Sbjct: 1153 MEAIQKLQLEITLNDIKWAIVNAPKLKIKEERVMVV 1188 [51][TOP] >UniRef100_A8PGH2 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8PGH2_COPC7 Length = 1403 Score = 155 bits (392), Expect = 2e-36 Identities = 83/164 (50%), Positives = 109/164 (66%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ L +FLDIC RY +IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1023 VTESHLRIFLDICWERYVKARIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1082 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A I TPII+ L T D+ AR+VKGR+EKT LG V ++ Sbjct: 1083 GVPRIKEIINAAKAISTPIISCKLVTPDSEPSARIVKGRLEKTLLGDVVSVLEEAWAPDY 1142 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 + I +D I++ L + + +K +I+ KLK+K++ I I+ Sbjct: 1143 TYIGIIVDVDAIQKLQLELTLDDIKWAIVAAKKLKIKQESITII 1186 [52][TOP] >UniRef100_Q6CMC7 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CMC7_KLULA Length = 1457 Score = 155 bits (391), Expect = 3e-36 Identities = 82/164 (50%), Positives = 110/164 (67%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 IS+ ++ FL I +S+Y ++E GT +GAIGA SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1060 ISKILVQKFLSIAISKYHRARVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1119 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L V+ ++ + Sbjct: 1120 GVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVSFYVQDIYRDNM 1179 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 A L I +D + IE+ L + + +I + KLK+ +I I+ Sbjct: 1180 AFLQIKIDSETIEKLQLELTLEDIVVAIAKAPKLKIGTNDISII 1223 [53][TOP] >UniRef100_UPI00017B08B5 UPI00017B08B5 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B08B5 Length = 1391 Score = 154 bits (390), Expect = 4e-36 Identities = 85/174 (48%), Positives = 116/174 (66%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 +PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM Sbjct: 998 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1050 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT Sbjct: 1051 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1110 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 LG++++ I+ V + + L + I L +++ TV+ SI + KL++K Sbjct: 1111 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVK 1163 [54][TOP] >UniRef100_A8Q6K6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q6K6_MALGO Length = 1376 Score = 154 bits (390), Expect = 4e-36 Identities = 81/164 (49%), Positives = 110/164 (67%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S + F+++C +Y KIE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1003 VSEATILEFINLCWDKYMRAKIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1062 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A I TPII A L ++ + AR+VKGRIEKT LG VA I+ + Sbjct: 1063 GVPRIKEIINAAKVINTPIIAATLVSEKSEQAARIVKGRIEKTYLGDVASVIEEAWSGTY 1122 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 + I +D I++ L + + +K +I+ ++K+KE+ I +L Sbjct: 1123 TYIGIDIDTAAIQKLQLEVTLDDIKRAIVAMPRMKIKEERIIVL 1166 [55][TOP] >UniRef100_Q5CWY0 DNA-directed RNA polymerase n=2 Tax=Cryptosporidium parvum RepID=Q5CWY0_CRYPV Length = 1871 Score = 154 bits (389), Expect = 5e-36 Identities = 87/167 (52%), Positives = 115/167 (68%), Gaps = 3/167 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 I+ RQL F+ S+Y E G +GAI A SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1437 ITIRQLYEFIKASWSKYMKAITEPGEAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNVTL 1496 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A+ I TPII A LE D + N A++VKG I KT L +V I+ + + Sbjct: 1497 GVPRIKEIINAATKILTPIIEAKLENDSDFNYAQIVKGSIVKTLLNEVVSDIEELYSPNG 1556 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579 + I+L+E+ I+ YL+I++ TV++SI+ G K+KLK ++I++L Sbjct: 1557 VFININLNEETIKGHYLDINAYTVRDSIVSHGPISKIKLKLEDIQVL 1603 [56][TOP] >UniRef100_Q5CK97 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis RepID=Q5CK97_CRYHO Length = 1869 Score = 154 bits (389), Expect = 5e-36 Identities = 87/167 (52%), Positives = 115/167 (68%), Gaps = 3/167 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 I+ RQL F+ S+Y E G +GAI A SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1435 ITIRQLYEFIKASWSKYMKAITEPGEAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNVTL 1494 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A+ I TPII A LE D + N A++VKG I KT L +V I+ + + Sbjct: 1495 GVPRIKEIINAATKILTPIIEAKLENDSDFNYAQIVKGSIVKTLLNEVVSDIEELYSPNG 1554 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579 + I+L+E+ I+ YL+I++ TV++SI+ G K+KLK ++I++L Sbjct: 1555 VFININLNEETIKGHYLDINAYTVRDSIVSHGPISKIKLKLEDIQVL 1601 [57][TOP] >UniRef100_C5DJG5 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DJG5_LACTC Length = 1460 Score = 154 bits (389), Expect = 5e-36 Identities = 82/170 (48%), Positives = 112/170 (65%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + ++ IS + + FL+I + +Y K+E GT +GA+GAHSIGEPGTQMTLKTFHFAGVA Sbjct: 1055 VDQLCKISSKLVLKFLEIAIFKYHKAKVEPGTAVGAVGAHSIGEPGTQMTLKTFHFAGVA 1114 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMNVTLGVPRI EIIN + I TPII A+L +++ AR+VKGRIEKT L VA I+ Sbjct: 1115 SMNVTLGVPRIKEIINASKVISTPIINAVLVNNNDERAARVVKGRIEKTLLSDVAFYIQD 1174 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 V + L + +D IE+ L + + +I + KLK+ ++ I+ Sbjct: 1175 VYKDNMSFLQVKVDLGTIEKLQLELTVEDIAVAITRAAKLKIAASDVSIM 1224 [58][TOP] >UniRef100_UPI000155D900 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Equus caballus RepID=UPI000155D900 Length = 1390 Score = 154 bits (388), Expect = 6e-36 Identities = 81/167 (48%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDRDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167 [59][TOP] >UniRef100_UPI0001554E8D PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001554E8D Length = 1382 Score = 154 bits (388), Expect = 6e-36 Identities = 81/167 (48%), Positives = 116/167 (69%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 994 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1053 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L++DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1054 NITLGVPRIKEIINASKAISTPIITAQLDSDDDSDFARLVKGRIEKTLLGEISEYIEEVF 1113 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI + KL++K ++ + Sbjct: 1114 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1159 [60][TOP] >UniRef100_UPI0000F2AF25 PREDICTED: similar to Proteasome (prosome, macropain) subunit, alpha type, 2 n=1 Tax=Monodelphis domestica RepID=UPI0000F2AF25 Length = 1390 Score = 154 bits (388), Expect = 6e-36 Identities = 81/167 (48%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDQDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167 [61][TOP] >UniRef100_B2RXC6 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=B2RXC6_MOUSE Length = 1390 Score = 154 bits (388), Expect = 6e-36 Identities = 81/167 (48%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167 [62][TOP] >UniRef100_B0DK21 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DK21_LACBS Length = 1397 Score = 154 bits (388), Expect = 6e-36 Identities = 81/166 (48%), Positives = 110/166 (66%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261 S ++ QL FLD+C +Y +IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNV Sbjct: 1016 SKVTESQLRKFLDLCWVKYVKARIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNV 1075 Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 TLGVPRI EIIN A I TPII+ L T D+ AR+VK R+EKT LG +A ++ Sbjct: 1076 TLGVPRIKEIINAAKAISTPIISCKLVTSDSEASARIVKARLEKTLLGDIASVLEEAWAP 1135 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 + I +D I++ L + + +K +I+ KLK+K++ I ++ Sbjct: 1136 EYTYIGIIVDVNAIQKLQLELTLDDIKWAIVNAKKLKIKQESITVM 1181 [63][TOP] >UniRef100_UPI0000E22532 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Pan troglodytes RepID=UPI0000E22532 Length = 1349 Score = 153 bits (387), Expect = 8e-36 Identities = 81/167 (48%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 961 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1020 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1021 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1080 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1081 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1126 [64][TOP] >UniRef100_O14802 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Homo sapiens RepID=RPC1_HUMAN Length = 1390 Score = 153 bits (387), Expect = 8e-36 Identities = 81/167 (48%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167 [65][TOP] >UniRef100_Q6FKG9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FKG9_CANGA Length = 1459 Score = 153 bits (386), Expect = 1e-35 Identities = 82/170 (48%), Positives = 112/170 (65%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 I ++ I+ ++ FL+I +S+Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA Sbjct: 1055 ITQLYRITEDAVQKFLEIAISKYHRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1114 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 SMNVTLGVPRI EIIN + I TPII A+L +++ AR+VKGRIEKT L V I+ Sbjct: 1115 SMNVTLGVPRIKEIINASKVISTPIINAVLVNNNDERAARVVKGRIEKTLLSDVCYYIQD 1174 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 V A L + +D I++ L + + +I + KLK++ ++ +L Sbjct: 1175 VYKENMAYLQVKVDLNTIDKLQLELTIEDIAIAITRAPKLKIQTSDVTVL 1224 [66][TOP] >UniRef100_UPI00017EFF90 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Sus scrofa RepID=UPI00017EFF90 Length = 1390 Score = 152 bits (385), Expect = 1e-35 Identities = 81/167 (48%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + I L + I L +++ TV+ SI + KL++K ++ + Sbjct: 1122 LPDDCFILIKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1167 [67][TOP] >UniRef100_Q8TCW3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens RepID=Q8TCW3_HUMAN Length = 435 Score = 152 bits (385), Expect = 1e-35 Identities = 81/165 (49%), Positives = 114/165 (69%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 271 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 330 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 331 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 390 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570 + + L + I L +++ TV+ SI T KL++K ++ Sbjct: 391 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDV 434 [68][TOP] >UniRef100_UPI000194E725 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa, partial n=1 Tax=Taeniopygia guttata RepID=UPI000194E725 Length = 346 Score = 152 bits (384), Expect = 2e-35 Identities = 81/167 (48%), Positives = 114/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 73 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 132 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 133 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 192 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI KL++K ++ + Sbjct: 193 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-VSKLRVKPGDVAV 238 [69][TOP] >UniRef100_UPI000194C79C PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Taeniopygia guttata RepID=UPI000194C79C Length = 1390 Score = 152 bits (384), Expect = 2e-35 Identities = 81/167 (48%), Positives = 114/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-VSKLRVKPGDVAV 1167 [70][TOP] >UniRef100_UPI00004BFD05 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Canis lupus familiaris RepID=UPI00004BFD05 Length = 1390 Score = 152 bits (384), Expect = 2e-35 Identities = 80/167 (47%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI + KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1167 [71][TOP] >UniRef100_UPI0000EB3E23 DNA-directed RNA polymerase III subunit RPC1 (EC 2.7.7.6) (RNA polymerase III subunit C1) (DNA-directed RNA polymerase III subunit A) (DNA-directed RNA polymerase III largest subunit) (RPC155) (C160). n=1 Tax=Canis lupus familiaris RepID=UPI0000EB3E23 Length = 1393 Score = 152 bits (384), Expect = 2e-35 Identities = 80/167 (47%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1005 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1064 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1065 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1124 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI + KL++K ++ + Sbjct: 1125 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1170 [72][TOP] >UniRef100_UPI0000612BF9 UPI0000612BF9 related cluster n=1 Tax=Bos taurus RepID=UPI0000612BF9 Length = 1392 Score = 152 bits (384), Expect = 2e-35 Identities = 80/167 (47%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1004 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1063 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1064 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1123 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI + KL++K ++ + Sbjct: 1124 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1169 [73][TOP] >UniRef100_A4IF62 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Bos taurus RepID=RPC1_BOVIN Length = 1390 Score = 152 bits (384), Expect = 2e-35 Identities = 80/167 (47%), Positives = 115/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI + KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1167 [74][TOP] >UniRef100_UPI00003AE23E polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1 Tax=Gallus gallus RepID=UPI00003AE23E Length = 1390 Score = 152 bits (383), Expect = 2e-35 Identities = 81/167 (48%), Positives = 114/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-ISKLRVKPGDVAV 1167 [75][TOP] >UniRef100_Q16SE0 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16SE0_AEDAE Length = 1298 Score = 152 bits (383), Expect = 2e-35 Identities = 84/178 (47%), Positives = 113/178 (63%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 K ++ + + +R QLE FL ++Y E GT +GA+ A SIGEPGTQMTL Sbjct: 906 KRYRHCSKVSLEVERTTRGQLEAFLTQVRNKYNKAITEPGTAVGALAAQSIGEPGTQMTL 965 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMN+T GVPRI+EIIN I TPIITA +E + ++ AR VK RIEKTTL Sbjct: 966 KTFHFAGVASMNITQGVPRIVEIINATKAISTPIITAEIEDNTSMEFARKVKARIEKTTL 1025 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 G+++ I+ S L I LD I L +++ T++ SI T KLKLK++ +++ Sbjct: 1026 GEISSYIEEAYKSDDCFLLIKLDLDRIRVLGLEVNAETIRYSIC-TSKLKLKQENVEV 1082 [76][TOP] >UniRef100_Q16PD2 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16PD2_AEDAE Length = 1298 Score = 152 bits (383), Expect = 2e-35 Identities = 84/178 (47%), Positives = 113/178 (63%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 K ++ + + +R QLE FL ++Y E GT +GA+ A SIGEPGTQMTL Sbjct: 906 KRYRHCSKVSLEVERTTRGQLEAFLTQVRNKYNKAITEPGTAVGALAAQSIGEPGTQMTL 965 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMN+T GVPRI+EIIN I TPIITA +E + ++ AR VK RIEKTTL Sbjct: 966 KTFHFAGVASMNITQGVPRIVEIINATKAISTPIITAEIEDNTSMEFARKVKARIEKTTL 1025 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 G+++ I+ S L I LD I L +++ T++ SI T KLKLK++ +++ Sbjct: 1026 GEISSYIEEAYKSDDCFLLIKLDLDRIRVLGLEVNAETIRYSIC-TSKLKLKQENVEV 1082 [77][TOP] >UniRef100_A2DEX5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3 RepID=A2DEX5_TRIVA Length = 1657 Score = 152 bits (383), Expect = 2e-35 Identities = 82/170 (48%), Positives = 112/170 (65%) Frame = +1 Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234 +++++I ++ LE F+ C+ R E G +GA+ SIGEP TQMTL++FH Sbjct: 968 SMDSYIRATIPFTKSFLEEFVKFCMHRCEKSMAEPGMTVGAVAGQSIGEPATQMTLRSFH 1027 Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414 FAGVASMNVTLGVPRI E++N S IKTPIITA L + + AR+VKG I++ TLGQV Sbjct: 1028 FAGVASMNVTLGVPRIEEVMNAVSEIKTPIITANLLSQRDEIAARIVKGIIDRVTLGQVC 1087 Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 K I+ +S + I LD +II EA LNI S TV+ SI+ T K+ +K++ Sbjct: 1088 KHIEYNQNEKSCYIDIELDAEIIREAKLNITSETVRRSIVNTPKIGVKDE 1137 [78][TOP] >UniRef100_Q5ZL98 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Gallus gallus RepID=RPC1_CHICK Length = 1390 Score = 152 bits (383), Expect = 2e-35 Identities = 81/167 (48%), Positives = 114/167 (68%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1002 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI KL++K ++ + Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-ISKLRVKPGDVAV 1167 [79][TOP] >UniRef100_B7G2E6 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G2E6_PHATR Length = 1281 Score = 151 bits (382), Expect = 3e-35 Identities = 85/166 (51%), Positives = 110/166 (66%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261 S ++ QLE+ L L + +E G +GAIGA SI EPGTQMTLKTFHF+G++SMNV Sbjct: 940 SRMTETQLELLLTEALDKCMLAYVEPGEAVGAIGAQSISEPGTQMTLKTFHFSGISSMNV 999 Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 TLGVPR+ EIIN A I TPIITA LE D+N AR+VK IEKTTLG+V+K +K V Sbjct: 1000 TLGVPRLKEIINAAKLISTPIITAKLECDNNKVAARIVKAVIEKTTLGEVSKYMKEVYAP 1059 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 S + + LD IE+ LN+D ++V+ SIL K K +++L Sbjct: 1060 GSCYISVELDMDAIEQLKLNVDVHSVRRSILYGTKGIAKNAGMQML 1105 [80][TOP] >UniRef100_B4L5G1 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4L5G1_DROMO Length = 1382 Score = 151 bits (382), Expect = 3e-35 Identities = 87/186 (46%), Positives = 120/186 (64%) Frame = +1 Query: 13 LTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHS 192 +T+ I++ K+ + +I ISR QL FL RY E GT +GAI A S Sbjct: 974 VTKRISKLQEKYGAEHKDLCKQIECISREQLLEFLRRINDRYNRAVTEPGTAVGAIAAQS 1033 Query: 193 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARM 372 IGEPGTQMTLKTFHFAGVASMN+T GVPRI+EIIN I TPIITA L + ++ AR Sbjct: 1034 IGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELRNNTSMEFARQ 1093 Query: 373 VKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 VK RIEKTTLG+++ +++V +S L I +D I+ L+ID +++ SIL++ +L+ Sbjct: 1094 VKARIEKTTLGELSSFVELVCGPQSCHLVIGIDTARIKVLGLHIDLDSIMCSILKS-RLR 1152 Query: 553 LKEKEI 570 +K ++ Sbjct: 1153 IKANQL 1158 [81][TOP] >UniRef100_UPI0001A2B922 UPI0001A2B922 related cluster n=1 Tax=Danio rerio RepID=UPI0001A2B922 Length = 438 Score = 151 bits (381), Expect = 4e-35 Identities = 86/182 (47%), Positives = 123/182 (67%), Gaps = 3/182 (1%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 +PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM Sbjct: 265 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 317 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPII+A L+T+D+ + AR+VKGRIEKT Sbjct: 318 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIISANLDTNDDPDFARLVKGRIEKT 377 Query: 397 TLGQVAKSIKVVATSRSAALFI--SLDE-KIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567 LG++++ I+ V + + SLD +++ + +++ TV+ SI T KL++K + Sbjct: 378 LLGEISEYIEEVFLPDDTFILVKLSLDRIRLLCFCCVQVNAETVRYSIC-TSKLRVKPGD 436 Query: 568 IK 573 ++ Sbjct: 437 VQ 438 [82][TOP] >UniRef100_Q7PMU6 DNA-directed RNA polymerase n=1 Tax=Anopheles gambiae RepID=Q7PMU6_ANOGA Length = 1379 Score = 151 bits (381), Expect = 4e-35 Identities = 83/159 (52%), Positives = 107/159 (67%) Frame = +1 Query: 100 QLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 279 QLE FL ++Y E GT +GA+ A SIGEPGTQMTLKTFHFAGVASMN+T GVPR Sbjct: 1006 QLEEFLLQVRNKYNKAVTEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPR 1065 Query: 280 IMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALF 459 I+EIIN I TPIITA +E + N+ AR VK RIEKTTLG+++ I+ V L Sbjct: 1066 IVEIINATKAISTPIITAEIENNTNMEFARKVKARIEKTTLGEISSYIEEVYKMNECFLL 1125 Query: 460 ISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 I LD I L ++++T++ SI T KLKLK++ +++ Sbjct: 1126 IKLDLGRIRVLGLEVNADTIRYSIC-TSKLKLKQENVEV 1163 [83][TOP] >UniRef100_C5DY31 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DY31_ZYGRC Length = 1458 Score = 151 bits (381), Expect = 4e-35 Identities = 83/193 (43%), Positives = 120/193 (62%) Frame = +1 Query: 1 ENTKLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAI 180 ++ L E + ED + + + ++ I+ + + FL + + +YR K+E GT +GAI Sbjct: 1038 QSVDLDENVPED-------IRHSVDQVYRITDKMVREFLRVAILKYRRAKVEPGTAVGAI 1090 Query: 181 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN 360 GA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L + + Sbjct: 1091 GAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNESDER 1150 Query: 361 IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQT 540 AR+VKGRIEKT L VA I+ V + L + +D I++ L + + ++ + Sbjct: 1151 AARVVKGRIEKTLLSDVAFYIQDVYRDNLSYLQVRVDLSTIDKLQLELTIEDIAVAMTRA 1210 Query: 541 GKLKLKEKEIKIL 579 KLK++ ++ I+ Sbjct: 1211 PKLKIQASDVHIV 1223 [84][TOP] >UniRef100_B8C4M1 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C4M1_THAPS Length = 1422 Score = 150 bits (379), Expect = 7e-35 Identities = 83/146 (56%), Positives = 101/146 (69%) Frame = +1 Query: 100 QLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 279 Q+ FL LS+Y +E G +GAIGA SI EPGTQMTLKTFHFAGV+SMNVTLGVPR Sbjct: 1033 QVNEFLKTALSKYTKAMVEPGEAVGAIGAQSISEPGTQMTLKTFHFAGVSSMNVTLGVPR 1092 Query: 280 IMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALF 459 + EIIN + NI TPIITA L DDN AR+VK IEKTTLG+++ +K V +S L Sbjct: 1093 LKEIINASKNISTPIITAKLVQDDNKVGARIVKAGIEKTTLGEISIYVKEVYSSGDCYLS 1152 Query: 460 ISLDEKIIEEAYLNIDSNTVKESILQ 537 I LD I + LNID+ +V+ IL+ Sbjct: 1153 ILLDMDAIRQLRLNIDAVSVRRCILK 1178 [85][TOP] >UniRef100_B9PZ91 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1 RepID=B9PZ91_TOXGO Length = 1747 Score = 149 bits (377), Expect = 1e-34 Identities = 83/167 (49%), Positives = 110/167 (65%), Gaps = 3/167 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ R + FL +Y EAG +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1356 VTVRHILEFLRCSWRKYVKAISEAGEAVGAMGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1415 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A I+TPII L D++ N A MVK RIEKT L + IK V Sbjct: 1416 GVPRIKEIINAAQKIQTPIIVVPLVNDEDYNYAVMVKNRIEKTLLSECCSYIKEVYAPDG 1475 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579 A L + LD+ I + +L+I++NTVK++IL+ K+++ + ++I+ Sbjct: 1476 AWLVVKLDQHTIRKLFLDINANTVKDAILRQTAVNKVRITKNSVEII 1522 [86][TOP] >UniRef100_B6KRB8 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii RepID=B6KRB8_TOXGO Length = 1746 Score = 149 bits (377), Expect = 1e-34 Identities = 83/167 (49%), Positives = 110/167 (65%), Gaps = 3/167 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ R + FL +Y EAG +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1355 VTVRHILEFLRCSWRKYVKAISEAGEAVGAMGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1414 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A I+TPII L D++ N A MVK RIEKT L + IK V Sbjct: 1415 GVPRIKEIINAAQKIQTPIIVVPLVNDEDYNYAVMVKNRIEKTLLSECCSYIKEVYAPDG 1474 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579 A L + LD+ I + +L+I++NTVK++IL+ K+++ + ++I+ Sbjct: 1475 AWLVVKLDQHTIRKLFLDINANTVKDAILRQTAVNKVRITKNSVEII 1521 [87][TOP] >UniRef100_B6AIF4 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66 RepID=B6AIF4_9CRYT Length = 1803 Score = 149 bits (377), Expect = 1e-34 Identities = 86/167 (51%), Positives = 112/167 (67%), Gaps = 3/167 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 I+ R L F+ +C +Y ++ G +GAI A SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1386 ITVRHLYEFISLCWLKYMKAIVQPGDAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNVTL 1445 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A+ I TPII A L+ + A+MVKG+I K L +V I+ V + + Sbjct: 1446 GVPRIKEIINAATKILTPIIQAPLKNPWDYKCAQMVKGKIVKYLLREVCTHIEEVYSPQG 1505 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579 L I L EK I+ YL+I++ TV++SI G KL+LKE +I+I+ Sbjct: 1506 VCLNIYLCEKTIQNLYLDINAYTVRDSIYSHGQICKLRLKEGDIQII 1552 [88][TOP] >UniRef100_B4JN80 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4JN80_DROGR Length = 1303 Score = 149 bits (376), Expect = 2e-34 Identities = 84/165 (50%), Positives = 111/165 (67%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 +I IS+ QL FL RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM Sbjct: 916 QIESISQEQLLEFLRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 975 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+T GVPRI+EIIN +I TPIITA L + ++ AR VK RIEKTTLG+++ +++V Sbjct: 976 NITQGVPRIVEIINATKSISTPIITAELRNNKSMEFARQVKARIEKTTLGELSSYVELVC 1035 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570 S L I++D I+ L ID +T+ SIL++ +L++K ++ Sbjct: 1036 GPYSCHLVINIDAARIKVLGLYIDLDTIIASILKS-RLRIKPGQV 1079 [89][TOP] >UniRef100_B3MLS5 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MLS5_DROAN Length = 1301 Score = 149 bits (375), Expect = 2e-34 Identities = 89/200 (44%), Positives = 121/200 (60%), Gaps = 14/200 (7%) Frame = +1 Query: 19 ETITEDDPKHLKNLN--------------NFIPRISGISRRQLEVFLDICLSRYRFKKIE 156 E ED KHLK ++ N +I ++ QL FL RY E Sbjct: 882 EDFKEDVRKHLKTVSKRISLLQEKYDPYGNLCNQIECLTTEQLLEFLRRINDRYNRAVTE 941 Query: 157 AGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAI 336 GT +GAI A SIGEPGTQMTLKTFHFAGVASMN+T GVPRI+EIIN I TPIITA Sbjct: 942 PGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE 1001 Query: 337 LETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNT 516 L+ + ++ AR VK RIEKTTLG+++ ++VV L I +D I+ L+I+ +T Sbjct: 1002 LQDNLSMEFARQVKARIEKTTLGELSSYVEVVCGPHCCYLAIGIDMSRIKLLGLHINLDT 1061 Query: 517 VKESILQTGKLKLKEKEIKI 576 + SIL++ +++LK ++++ Sbjct: 1062 IVASILKS-RMRLKPAQVEV 1080 [90][TOP] >UniRef100_A7EYX3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EYX3_SCLS1 Length = 1459 Score = 149 bits (375), Expect = 2e-34 Identities = 70/170 (41%), Positives = 114/170 (67%) Frame = +1 Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246 ++ +++ +S+ L+ F ++CL +Y K+E G +GA+GA SIGEPGTQMTLKTFHFAGV Sbjct: 1053 YVNQVAKVSKTTLKKFCELCLEKYSRAKVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGV 1112 Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426 A MN+T GVPRI EIIN + I TP + L D ++++AR+VK R+EKT L +V + Sbjct: 1113 AGMNLTAGVPRIKEIINASKTIATPFVKCPLLNDKDLDVARLVKARMEKTYLHEVLHFAE 1172 Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + ++RSA + +++D + + + + + +IL+ KLK+K +++ + Sbjct: 1173 DMWSARSAVICLAVDTEYLVNRQIEVTVENIATTILKNKKLKVKSEDLNV 1222 [91][TOP] >UniRef100_B4MT76 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4MT76_DROWI Length = 1381 Score = 148 bits (374), Expect = 3e-34 Identities = 82/167 (49%), Positives = 112/167 (67%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 +I +S QL +L RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM Sbjct: 994 QIEAVSGEQLLEYLRRINERYNRAVSEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 1053 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+T GVPRI+EIIN I TPIITA L + ++ AR VK RIEKTTLG+++ ++VV Sbjct: 1054 NITQGVPRIVEIINATKTISTPIITAELRNNTSMEYARQVKARIEKTTLGELSSYVEVVC 1113 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + S L I +D I+ L+I+ +T+ SIL++ +L++K ++++ Sbjct: 1114 RAFSCHLVIGIDMARIKVLGLHINLDTIVASILKS-RLRIKPNQVEV 1159 [92][TOP] >UniRef100_A7AP17 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AP17_BABBO Length = 1541 Score = 148 bits (374), Expect = 3e-34 Identities = 86/167 (51%), Positives = 107/167 (64%), Gaps = 3/167 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S RQ+ F+ C Y+ G IGA+GA SIGEPGTQMTLKTFHFAGVASMNVTL Sbjct: 1174 LSVRQIFEFVRCCWKDYQRAICVPGEAIGALGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1233 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN +S I+TPII L + + A MVK RIEKTTLGQV IK + Sbjct: 1234 GVPRIKEIINASSTIQTPIIEVPLINNKDFEYALMVKARIEKTTLGQVCSDIKEIFGPTG 1293 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579 A L ++L+E +I++ L ID+ V+E IL K KL + I ++ Sbjct: 1294 AQLRVTLNENLIKKLLLQIDAFKVREIILDNSVMTKFKLGKHAISVV 1340 [93][TOP] >UniRef100_C7YT68 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YT68_NECH7 Length = 1449 Score = 148 bits (374), Expect = 3e-34 Identities = 72/167 (43%), Positives = 108/167 (64%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 R + ++ L +F+ +CL +Y+ +E G +GA+GAHSIGEPGTQMTLKTFHFAGVA M Sbjct: 1042 RTAKVTLSTLRLFIKMCLDKYKKAHVEPGHAVGAVGAHSIGEPGTQMTLKTFHFAGVAGM 1101 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 ++T GVPRI EIIN + I TP+IT LE ++ I AR+VKGRIEKT + V + ++ Sbjct: 1102 SITQGVPRIKEIINASKTISTPVITCPLENNEQIEAARVVKGRIEKTYISDVLRFVEDEW 1161 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + + +D + + +L I + E+I + KLK++ ++ I Sbjct: 1162 RTNEGNVVLQIDSTALSDMHLGIGPYDIAEAICKQRKLKVQRDDLSI 1208 [94][TOP] >UniRef100_B3L8U1 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3L8U1_PLAKH Length = 1970 Score = 148 bits (373), Expect = 3e-34 Identities = 80/165 (48%), Positives = 115/165 (69%), Gaps = 2/165 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 ++ +QL +F+ +S+Y FK I + G +G+I A SIGEPGTQMTLKTFHFAGVASMN+T Sbjct: 1424 VNLKQLYLFIFFNVSKY-FKYISSPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMNIT 1482 Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444 LGVPRI EIIN +SNI+TPI+ L+ DN N A M+K ++EKTT+ + IK TSR Sbjct: 1483 LGVPRIKEIINASSNIQTPILNIPLQVKDNYNFALMMKSKLEKTTIRDICLYIKEDYTSR 1542 Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL-KLKEKEIKI 576 L + +E++I +LNI++ T+K+ I++ + K+K +I + Sbjct: 1543 GIFLSVKFNEQLIHNLFLNINAYTIKDIIMRQSHINKIKINKIVV 1587 [95][TOP] >UniRef100_B0EG66 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760 RepID=B0EG66_ENTDI Length = 1379 Score = 148 bits (373), Expect = 3e-34 Identities = 78/166 (46%), Positives = 108/166 (65%) Frame = +1 Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 + GI+ + L+ F+ IC + EAGTP+GA+ S+GEP TQM LKTFHFAGVASMN Sbjct: 1006 LCGITIQTLKEFISICQKKGLRSVCEAGTPVGALAGQSMGEPSTQMVLKTFHFAGVASMN 1065 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 + LGVPRI EIIN + I+TPI+TA L ++ AR+VKGRIE T L ++AKSIK+V Sbjct: 1066 IALGVPRIKEIINASKKIQTPIVTAKLVNSQDLTSARIVKGRIEATRLKEIAKSIKIVFK 1125 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 A + + LD + I++ L V++ +L LKLK+ ++ I Sbjct: 1126 PAEAYISVKLDFETIKQLELECTIEKVQDVLLNYRGLKLKDNQVII 1171 [96][TOP] >UniRef100_UPI000023CDC4 hypothetical protein FG09860.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023CDC4 Length = 2443 Score = 147 bits (372), Expect = 4e-34 Identities = 71/167 (42%), Positives = 109/167 (65%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 R + ++ L++F+ +CL +Y+ +E G +GA+GAHSIGEPGTQMTLKTFHFAGVA M Sbjct: 2035 RTAKVTLSTLQLFIKLCLEKYKKAHVEPGHAVGAVGAHSIGEPGTQMTLKTFHFAGVAGM 2094 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 ++T GVPRI EIIN + I TP+IT LE ++ I AR+VKGRIEKT + + + ++ Sbjct: 2095 SITQGVPRIKEIINASKAISTPVITCPLENNEQIEAARVVKGRIEKTYISDILRFVEDEW 2154 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + + +D + + +L I + E+I + KLK++ ++ I Sbjct: 2155 RTTEGNVVLQIDPTALSDMHLGIGPYDIAEAICKQRKLKVQRDDLSI 2201 [97][TOP] >UniRef100_Q8IE49 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8IE49_PLAF7 Length = 2356 Score = 147 bits (372), Expect = 4e-34 Identities = 81/170 (47%), Positives = 117/170 (68%), Gaps = 4/170 (2%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 S I+ +QL +F+ + +Y FK I G +G+I A SIGEPGTQMTLKTFHFAGVASMN Sbjct: 1765 SFINLKQLYLFIFFNIYKY-FKYISTPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMN 1823 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 VTLGVPRI EIIN +++I+TPI+ LE +DN N A M+K ++EKTT+ + IK T Sbjct: 1824 VTLGVPRIKEIINASNSIQTPILNIPLEVNDNYNFALMMKSKLEKTTIRDICMYIKEDYT 1883 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579 SR L + +E++I++ +LNI++ +K+ IL+ K+K+ + I ++ Sbjct: 1884 SRGVFLSVKFNEELIQKLFLNINAYNIKDIILKQSHINKIKINKIHINVI 1933 [98][TOP] >UniRef100_C4M626 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M626_ENTHI Length = 1379 Score = 147 bits (372), Expect = 4e-34 Identities = 79/174 (45%), Positives = 110/174 (63%) Frame = +1 Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234 N N + GI+ + L+ F+ IC + EAGTP+GA+ S+GEP TQM LKTFH Sbjct: 998 NQENAQHGLCGITIQTLKDFISICHEKGLRSVCEAGTPVGALAGQSMGEPSTQMVLKTFH 1057 Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414 FAGVASMN+ LGVPRI EIIN + I+TPI+TA L ++ AR+VKGRIE T L ++A Sbjct: 1058 FAGVASMNIALGVPRIKEIINASKKIQTPIVTAKLVNSQDVTSARIVKGRIEATRLKEIA 1117 Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 KS+K+V A + + LD + I++ L V++ +L LKLK+ ++ I Sbjct: 1118 KSVKIVFKPAEAYISVKLDFETIKQLELECTIEKVQDVLLNYRGLKLKDNQVII 1171 [99][TOP] >UniRef100_C5MI79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MI79_CANTT Length = 1159 Score = 147 bits (372), Expect = 4e-34 Identities = 81/153 (52%), Positives = 104/153 (67%) Frame = +1 Query: 31 EDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGT 210 ++DP + ++N + IS++ +E FL+ CL +Y K+E GT +GAIGA SIGEPGT Sbjct: 1011 DEDPAVVNSVNQILK----ISQKTIEKFLEQCLYKYSRAKVEPGTAVGAIGAQSIGEPGT 1066 Query: 211 QMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIE 390 QMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII ++L D++ AR+ KGRIE Sbjct: 1067 QMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINSVLVNDEDEIAARVAKGRIE 1126 Query: 391 KTTLGQVAKSIKVVATSRSAALFISLDEKIIEE 489 KT L VA I+ V L I +D + I+E Sbjct: 1127 KTLLEDVAFYIEDVYKDNLCYLSIKIDLETIDE 1159 [100][TOP] >UniRef100_P27625 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Plasmodium falciparum RepID=RPC1_PLAFA Length = 2339 Score = 147 bits (372), Expect = 4e-34 Identities = 81/170 (47%), Positives = 117/170 (68%), Gaps = 4/170 (2%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 S I+ +QL +F+ + +Y FK I G +G+I A SIGEPGTQMTLKTFHFAGVASMN Sbjct: 1754 SFINLKQLYLFIFFNIYKY-FKYISTPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMN 1812 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 VTLGVPRI EIIN +++I+TPI+ LE +DN N A M+K ++EKTT+ + IK T Sbjct: 1813 VTLGVPRIKEIINASNSIQTPILNIPLEVNDNYNFALMMKSKLEKTTIRDICMYIKEDYT 1872 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579 SR L + +E++I++ +LNI++ +K+ IL+ K+K+ + I ++ Sbjct: 1873 SRGVFLSVKFNEELIQKLFLNINAYNIKDIILKQSHINKIKINKIHINVI 1922 [101][TOP] >UniRef100_UPI00016E6B7A UPI00016E6B7A related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E6B7A Length = 1320 Score = 147 bits (371), Expect = 6e-34 Identities = 86/186 (46%), Positives = 117/186 (62%), Gaps = 5/186 (2%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 +PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM Sbjct: 952 EPKVLYQLDRITPT-------QLERFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1004 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT Sbjct: 1005 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1064 Query: 397 TLGQVAKSIKVVATSRSAALFISLD-EKI----IEEAYLNIDSNTVKESILQTGKLKLKE 561 LG++++ I+ V + + L E+I +EEA + + +S + LKE Sbjct: 1065 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEEAVVCVSPRENSKSSMYYVLQSLKE 1124 Query: 562 KEIKIL 579 K++ Sbjct: 1125 DLPKVV 1130 [102][TOP] >UniRef100_Q4S3H6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S3H6_TETNG Length = 1319 Score = 145 bits (367), Expect = 2e-33 Identities = 84/185 (45%), Positives = 115/185 (62%), Gaps = 4/185 (2%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 +PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM Sbjct: 952 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1004 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT Sbjct: 1005 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1064 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIE----EAYLNIDSNTVKESILQTGKLKLKEK 564 LG++++ I+ V + + L + I EA + + +S + LKE+ Sbjct: 1065 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEAVVCVSPRENSKSSMYYVLQSLKEE 1124 Query: 565 EIKIL 579 K++ Sbjct: 1125 LPKVV 1129 [103][TOP] >UniRef100_B0WFY1 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus RepID=B0WFY1_CULQU Length = 1303 Score = 145 bits (367), Expect = 2e-33 Identities = 81/159 (50%), Positives = 105/159 (66%) Frame = +1 Query: 100 QLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 279 QL+ FL +Y E GT +GA+ A SIGEPGTQMTLKTFHFAGVASMN+T GVPR Sbjct: 930 QLKKFLMQVRDKYNKAITEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPR 989 Query: 280 IMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALF 459 I+EIIN I TPIITA + + ++ AR VK RIEKTTLG+++ I+ V S L Sbjct: 990 IVEIINATKAISTPIITAEIADNTSMEFARKVKARIEKTTLGEISSYIEEVYKSDDCFLL 1049 Query: 460 ISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 I LD I L +++ T++ SI T KLKLK++ +++ Sbjct: 1050 IKLDLDRIRVLGLEVNAETIRYSIC-TSKLKLKQENVEV 1087 [104][TOP] >UniRef100_B5DTL9 GA22253 (Fragment) n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=B5DTL9_DROPS Length = 419 Score = 144 bits (364), Expect = 4e-33 Identities = 83/175 (47%), Positives = 112/175 (64%) Frame = +1 Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231 + N +I I+ QL F+ RY E GT +GAI A SIGEPGTQMTLKTF Sbjct: 24 REYGNLCHQIECITAEQLLEFVRRINDRYNRAVSEPGTAVGAIAAQSIGEPGTQMTLKTF 83 Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQV 411 HFAGVASMN+T GVPRI+EIIN I TPIITA L+ + ++ AR VK RIEKTTLG++ Sbjct: 84 HFAGVASMNITQGVPRIVEIINATKTISTPIITAELQENSSMEYARHVKSRIEKTTLGEL 143 Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + I+VV S L + +D I+ L+I+ T+ IL++ +++LK +++I Sbjct: 144 SSFIEVVCGPYSCHLAMGIDMSRIKVLGLHINLETIVACILKS-RMRLKPAQVEI 197 [105][TOP] >UniRef100_B4IKC6 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia RepID=B4IKC6_DROSE Length = 1369 Score = 144 bits (364), Expect = 4e-33 Identities = 83/179 (46%), Positives = 114/179 (63%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL Sbjct: 969 KRYEKCINLCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 1028 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL Sbjct: 1029 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 1088 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 +++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++++ Sbjct: 1089 AELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVEVV 1146 [106][TOP] >UniRef100_Q2GTS6 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2GTS6_CHAGB Length = 1290 Score = 144 bits (363), Expect = 5e-33 Identities = 72/163 (44%), Positives = 105/163 (64%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + R++ +S R L F+ +CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA Sbjct: 981 VNRVAKVSERTLRQFIQMCLHKYKKARVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1040 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 M++T GVPRI EIIN + I TP+I+ LE +I AR+VKGRIEKT + + + Sbjct: 1041 GMSITQGVPRIKEIINASKTISTPVISCELENRVDIKAARVVKGRIEKTYVSDIISFVDD 1100 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 A + + +D + + + L I + ++I++ KLKLK Sbjct: 1101 EWLPDVAKIVLQVDLQALSDMQLGISMKDIADAIVRAKKLKLK 1143 [107][TOP] >UniRef100_B4PX62 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4PX62_DROYA Length = 1383 Score = 143 bits (361), Expect = 8e-33 Identities = 83/177 (46%), Positives = 112/177 (63%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL Sbjct: 983 KRYEKYINLCHQIECLTAEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 1042 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL Sbjct: 1043 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 1102 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573 +++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++ Sbjct: 1103 AELSSYVEVVCGPYSCYLAIGIDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVE 1158 [108][TOP] >UniRef100_B3NXK5 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3NXK5_DROER Length = 1383 Score = 143 bits (361), Expect = 8e-33 Identities = 83/177 (46%), Positives = 112/177 (63%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL Sbjct: 983 KRYEKYINLCHQIECLTAEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 1042 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL Sbjct: 1043 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 1102 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573 +++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++ Sbjct: 1103 AELSSYVEVVCGPYSCYLAIGIDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVE 1158 [109][TOP] >UniRef100_Q7RXJ6 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa RepID=Q7RXJ6_NEUCR Length = 1474 Score = 143 bits (361), Expect = 8e-33 Identities = 74/174 (42%), Positives = 110/174 (63%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 DP+ + + R++ +S L F+++CLS++ K+E G +GA+GA SIGEPGTQM Sbjct: 1007 DPEEEEIQQAHVDRVAKVSEATLRKFMNLCLSKFDKAKVEPGHAVGAVGAQSIGEPGTQM 1066 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVA M++T GVPRI EII + I TP+I+ LE + +I AR+VKG+IEKT Sbjct: 1067 TLKTFHFAGVAGMSITQGVPRIKEIIGASKLISTPVISCELENNRDIKAARIVKGKIEKT 1126 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 + V ++ V A + + +D + + + L I + +I++ KLKLK Sbjct: 1127 YISDVITYVEDVWLPDVAKIVLKIDMQALSDMQLGIGLREIMVAIVKAKKLKLK 1180 [110][TOP] >UniRef100_A2QU24 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2QU24_ASPNC Length = 1450 Score = 143 bits (361), Expect = 8e-33 Identities = 75/183 (40%), Positives = 110/183 (60%) Frame = +1 Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204 I +D + K LN+ ++ R L F+ CL +Y+ ++EAG +GA+GA SIGEP Sbjct: 1026 IDPNDERSQKGLNH----TGKLTERTLRTFISSCLMKYKKAQVEAGHAVGAVGAQSIGEP 1081 Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384 GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP++ L T DNI AR+VKGR Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVVACELVTKDNIIAARIVKGR 1141 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 IEKT L + ++ T + A + + ++ K I++ L + + +I + K + Sbjct: 1142 IEKTYLRDIIHYVRETWTGKEAYITVKINWKTIQDLALELKIENILSAIKNHKRFKADDL 1201 Query: 565 EIK 573 + + Sbjct: 1202 KFR 1204 [111][TOP] >UniRef100_B4R5H7 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans RepID=B4R5H7_DROSI Length = 723 Score = 143 bits (360), Expect = 1e-32 Identities = 83/177 (46%), Positives = 112/177 (63%) Frame = +1 Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222 K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL Sbjct: 323 KRYEKCINLCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 382 Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402 KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL Sbjct: 383 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 442 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573 +++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++ Sbjct: 443 AELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVE 498 [112][TOP] >UniRef100_A9UN86 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila melanogaster RepID=A9UN86_DROME Length = 1410 Score = 143 bits (360), Expect = 1e-32 Identities = 81/168 (48%), Positives = 111/168 (66%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1021 QIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 1080 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL +++ ++VV Sbjct: 1081 NITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTLAELSSYVEVVC 1140 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 S L I +D I+ L+ID +T+ SIL++ ++++K +++++ Sbjct: 1141 GPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVEVV 1187 [113][TOP] >UniRef100_A8JUY3 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster RepID=A8JUY3_DROME Length = 1376 Score = 143 bits (360), Expect = 1e-32 Identities = 81/168 (48%), Positives = 111/168 (66%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM Sbjct: 987 QIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 1046 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL +++ ++VV Sbjct: 1047 NITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTLAELSSYVEVVC 1106 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 S L I +D I+ L+ID +T+ SIL++ ++++K +++++ Sbjct: 1107 GPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVEVV 1153 [114][TOP] >UniRef100_B8MLB5 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MLB5_TALSN Length = 1441 Score = 143 bits (360), Expect = 1e-32 Identities = 74/170 (43%), Positives = 103/170 (60%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + + +S R L F+ CLS+Y KIE G +GA+GA SIGEPGTQMTLKTFHFAGV Sbjct: 1036 LDHVGKLSERSLRYFIKSCLSKYEKAKIEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVG 1095 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 ++ +T GVPRI EIIN + I TP+IT L D ++ AR+ KGRIEKT L + I+ Sbjct: 1096 NLALTQGVPRIKEIINASKEISTPVITCHLAVPDKVHAARIAKGRIEKTFLRDIIHYIRE 1155 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 + + + + L+ IE L + +KE+I+ + K K+ I +L Sbjct: 1156 SWSDKEGYITVKLNWDTIENLQLELSLPQIKEAIINHRRFKGKDLSIDVL 1205 [115][TOP] >UniRef100_Q7RQQ6 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RQQ6_PLAYO Length = 2020 Score = 142 bits (359), Expect = 1e-32 Identities = 82/167 (49%), Positives = 115/167 (68%), Gaps = 2/167 (1%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 S I+ +QL +F+ +S+Y FK I + G +G+I A SIGEPGTQMTLKTFHFAGVASMN Sbjct: 1450 SFINLKQLYIFIYFNISKY-FKYISSPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMN 1508 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 VTLGVPRI EIIN +S I+TPI+ L DN N A M+K ++EKT++ + + IK Sbjct: 1509 VTLGVPRIKEIINASSIIQTPILNIPLRIKDNYNFALMMKSKLEKTSIRDICEYIKENYC 1568 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESIL-QTGKLKLKEKEIKI 576 S+ + I +E +I++ +LNI++ T+++ IL QT K+K +I I Sbjct: 1569 SKGIYISIKFNEDLIQKLFLNINAYTIRDIILKQTHISKIKINKIYI 1615 [116][TOP] >UniRef100_B7PVV6 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis RepID=B7PVV6_IXOSC Length = 1394 Score = 142 bits (359), Expect = 1e-32 Identities = 79/168 (47%), Positives = 107/168 (63%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ ++ QL F C +Y +E T +GA+ A SIGEP TQMTLKTFHFAGVASM Sbjct: 1002 QLDRLTASQLRSFFATCREKYFRAVMEPATAVGAVCAQSIGEPATQMTLKTFHFAGVASM 1061 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+T GVPRI EIIN + NI TPIITA L + + AR VKGRIEKTTLG+V++ ++ V Sbjct: 1062 NITQGVPRIKEIINASKNISTPIITAALAVNQDAEYARRVKGRIEKTTLGEVSEYLEEVF 1121 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 + I LD I L ++++TV SI T KL++K + + ++ Sbjct: 1122 LPDECFVLIKLDLDRIRLLQLEVNADTVCYSI-ATSKLRIKGQNLSVV 1168 [117][TOP] >UniRef100_A5K7T9 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5K7T9_PLAVI Length = 1946 Score = 142 bits (359), Expect = 1e-32 Identities = 78/165 (47%), Positives = 114/165 (69%), Gaps = 2/165 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 ++ +QL +F+ +S+Y FK I A G +G+I A SIGEPGTQMTLKTFHFAGVASMNVT Sbjct: 1427 VNLKQLYLFIFFNVSKY-FKYISAPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMNVT 1485 Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444 LGVPRI EIIN +S I+TPI+ L+ D+ N A M+K ++EKTT+ + IK T+R Sbjct: 1486 LGVPRIKEIINASSTIQTPILNIPLQVKDSYNFALMMKSKLEKTTVRDICLYIKEDYTAR 1545 Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL-KLKEKEIKI 576 L + +E++I +LNI++ T+++ I++ + K+K +I + Sbjct: 1546 GIFLSVKFNEQLIHNLFLNINAYTIRDIIMRQSHISKIKINKILV 1590 [118][TOP] >UniRef100_A6SCV1 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10 RepID=A6SCV1_BOTFB Length = 1468 Score = 142 bits (359), Expect = 1e-32 Identities = 67/171 (39%), Positives = 111/171 (64%) Frame = +1 Query: 64 NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243 +++ +++ +S L+ F ++CL +Y K+E G +GA+GA SIGEPGTQMTLKTFHFAG Sbjct: 1049 DYVNQVAKVSETTLKKFCELCLEKYSRAKVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAG 1108 Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423 VA MN+T GVPRI EIIN + I TP + L + +AR+VK R+EKT L +V Sbjct: 1109 VAGMNLTAGVPRIKEIINASKTIATPFVKCPLLNSKELEVARLVKARMEKTYLHEVLHFA 1168 Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + +++SA + +++D + + + + + +IL+ KLK++ +++ + Sbjct: 1169 EDMWSAKSAIICLAVDTEYLVNRQIEVTVENIAHTILKNKKLKVRSEDLHV 1219 [119][TOP] >UniRef100_Q0CS43 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CS43_ASPTN Length = 1450 Score = 142 bits (357), Expect = 2e-32 Identities = 74/183 (40%), Positives = 110/183 (60%) Frame = +1 Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204 I +D + K LN+ ++ L F++ CL +Y+ ++E G +GA+GA SIGEP Sbjct: 1026 IDPNDERSQKGLNH----TGKLTETTLRTFINACLMKYKKAQVEPGHAVGAVGAQSIGEP 1081 Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384 GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP++ L T DNI AR+VKGR Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVVACELVTKDNIIAARIVKGR 1141 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 IEKT L + ++ T + A + + ++ K I++ L + N + +I + K + Sbjct: 1142 IEKTYLRDIIHYVRETWTGKEAFITVKINWKTIQDLALELKINNILAAIKNHKRFKADDL 1201 Query: 565 EIK 573 + + Sbjct: 1202 KFR 1204 [120][TOP] >UniRef100_B6K857 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K857_SCHJY Length = 1406 Score = 142 bits (357), Expect = 2e-32 Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 8/194 (4%) Frame = +1 Query: 19 ETITEDDPKHLKNLNNFIP--------RISGISRRQLEVFLDICLSRYRFKKIEAGTPIG 174 E +EDD +N ++F P + +S++QL FL C +Y K+E GT +G Sbjct: 990 ERPSEDDFDDFEN-DDFAPLAARKSVDNVLRVSKKQLYTFLQFCWEKYMKAKVEPGTAVG 1048 Query: 175 AIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDN 354 A+GAHSIGEPGTQMTLKTFHFAGVA+ TLGVPRI EIIN A I TPII L D + Sbjct: 1049 AVGAHSIGEPGTQMTLKTFHFAGVAA-QTTLGVPRIKEIINAAKTISTPIIYGALVNDQD 1107 Query: 355 INIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534 + AR+VKGRIEKT L V S++ + + + + ++ I + L++ + +I Sbjct: 1108 VRSARVVKGRIEKTYLKDVISSLEEIFGPTNTYISVHVNFDTIRKLQLDLTLADIASAIW 1167 Query: 535 QTGKLKLKEKEIKI 576 KLK+ +++ + Sbjct: 1168 TAPKLKIPMQQVTV 1181 [121][TOP] >UniRef100_UPI00018665E5 hypothetical protein BRAFLDRAFT_127993 n=1 Tax=Branchiostoma floridae RepID=UPI00018665E5 Length = 1391 Score = 141 bits (356), Expect = 3e-32 Identities = 85/179 (47%), Positives = 110/179 (61%), Gaps = 12/179 (6%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QL+ FL + +Y KIE GT +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 1003 QLERITPTQLKQFLIMVRDKYLRAKIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASM 1062 Query: 256 NV------------TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTT 399 N+ TLGVPRI EIIN + NI TPIITA LE D + AR VKGRIEK+ Sbjct: 1063 NILLTYLLNHVAHITLGVPRIKEIINASKNISTPIITAQLEDDTSAEFARRVKGRIEKSL 1122 Query: 400 LGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 LG+V + ++ V L I L I+ L + ++T++ SI T KL++K I + Sbjct: 1123 LGEVTEYMEEVYLPDDCFLLIKLHMDRIKLLKLEVSADTIRYSIC-TSKLRIKPANIVV 1180 [122][TOP] >UniRef100_Q4N1T2 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4N1T2_THEPA Length = 1617 Score = 141 bits (356), Expect = 3e-32 Identities = 75/157 (47%), Positives = 105/157 (66%) Frame = +1 Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 ++ IS Q+ F+ Y+ E G IGA+G+ SIGEP TQMTLKTFHFAGVASMN Sbjct: 1252 VNRISLEQMFEFIRYSWKDYQKSLCEPGEAIGALGSQSIGEPATQMTLKTFHFAGVASMN 1311 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 VTLGVPRI EIIN S I TPII LE + + + A VK +IEKTTLGQ+ +IK + T Sbjct: 1312 VTLGVPRIQEIINATSLIATPIIEVPLEDNTDYDFALKVKSKIEKTTLGQICLNIKQLYT 1371 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549 + + L +L+ +IE+ ++ ++++ V++ I+ +G L Sbjct: 1372 PQMSKLLFTLNRDLIEQLHIQVNADKVRDIIIDSGCL 1408 [123][TOP] >UniRef100_A4QVL1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4QVL1_MAGGR Length = 970 Score = 141 bits (356), Expect = 3e-32 Identities = 76/183 (41%), Positives = 113/183 (61%) Frame = +1 Query: 28 TEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPG 207 T DD K + R++ IS L FL +C ++ K E G +GA+GA SIGEPG Sbjct: 552 TADDSKADMQRVAQVNRVAKISHTTLIKFLKLCQEKHERAKTEPGHAVGAVGAQSIGEPG 611 Query: 208 TQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRI 387 TQMTLKTFHFAGVA M++T GVPRI EIIN + I TP+IT L+ + I AR+VKGRI Sbjct: 612 TQMTLKTFHFAGVAGMSITQGVPRIKEIINASKLISTPVITCPLQNNKQIEAARVVKGRI 671 Query: 388 EKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567 EKT + V + I+ + + ++ + +D +++ +L I + E+I + KLK++ + Sbjct: 672 EKTYVSDVLRFIEDEWKADTGSVVLQIDMGALQDMHLGIGLPEIAEAICKYKKLKIEPDD 731 Query: 568 IKI 576 +++ Sbjct: 732 LRL 734 [124][TOP] >UniRef100_A8PJK8 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PJK8_BRUMA Length = 1404 Score = 140 bits (354), Expect = 5e-32 Identities = 80/177 (45%), Positives = 107/177 (60%) Frame = +1 Query: 34 DDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQ 213 +D K+ K R +SR Q F+ +CL ++R E GT +GA+ A SIGEP TQ Sbjct: 1003 NDCKNQKFFRETEIRSHCLSRAQAVAFIKLCLRKFRRAICEPGTAVGAVAATSIGEPSTQ 1062 Query: 214 MTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEK 393 MTLKTFHFAGVASMN+T GVPRI EIING I TP+ITA L + + +AR VK RIEK Sbjct: 1063 MTLKTFHFAGVASMNITQGVPRIKEIINGVKLISTPLITAALTNEKDEKLARRVKARIEK 1122 Query: 394 TTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 TTLG++ I+ V + + ++ K + L I +++ +SI T KL + K Sbjct: 1123 TTLGEICDYIEEVYLPDDCFILLKINAKRVRLLQLEITMSSIAQSIC-TSKLPVPVK 1178 [125][TOP] >UniRef100_B0XZZ0 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus RepID=B0XZZ0_ASPFC Length = 1453 Score = 139 bits (350), Expect = 2e-31 Identities = 73/183 (39%), Positives = 109/183 (59%) Frame = +1 Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204 I D + K LN+ ++ + L F+ CL +Y+ ++E G +GA+GA SIGEP Sbjct: 1026 IDPSDERSQKGLNH----TGKLTEKTLRTFITSCLMKYKKAQVEPGHAVGAVGAQSIGEP 1081 Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384 GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L T DN+ AR+VKGR Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVISCDLVTKDNVIAARIVKGR 1141 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 IEKT L + ++ T + A L + ++ + I+ L + + ++I + K + Sbjct: 1142 IEKTYLRDIIHYVREAWTGKEAYLTVKINWETIQNLALELKIRNIVDAIKNHKRFKADDL 1201 Query: 565 EIK 573 + + Sbjct: 1202 KFR 1204 [126][TOP] >UniRef100_A1D5Y9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D5Y9_NEOFI Length = 1453 Score = 139 bits (350), Expect = 2e-31 Identities = 73/183 (39%), Positives = 109/183 (59%) Frame = +1 Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204 I D + K LN+ ++ + L F+ CL +Y+ ++E G +GA+GA SIGEP Sbjct: 1026 IDPSDERSQKGLNH----TGKLTEKTLRTFITSCLMKYKKAQVEPGHAVGAVGAQSIGEP 1081 Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384 GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L T DN+ AR+VKGR Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVISCDLVTKDNVIAARIVKGR 1141 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 IEKT L + ++ T + A L + ++ + I+ L + + ++I + K + Sbjct: 1142 IEKTYLRDIIHYVREAWTGKEAYLTVKINWETIQNLALELKIRNIVDAIKNHKRFKADDL 1201 Query: 565 EIK 573 + + Sbjct: 1202 KFR 1204 [127][TOP] >UniRef100_O94666 DNA-directed RNA polymerase III subunit rpc1 n=1 Tax=Schizosaccharomyces pombe RepID=RPC1_SCHPO Length = 1405 Score = 139 bits (350), Expect = 2e-31 Identities = 80/169 (47%), Positives = 104/169 (61%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + I ++ +QL F+D C +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA Sbjct: 1014 VENIIRVTEKQLRSFVDRCWEKYMRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1073 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 + TLGVPRI EIIN A I TPIIT L D + AR+VKGRIEKT L V I+ Sbjct: 1074 A-QTTLGVPRIKEIINAAKTISTPIITGQLINDRDERSARVVKGRIEKTYLKDVTSYIEE 1132 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 V + L I ++ I + L+I + +I T KLK+ +++ + Sbjct: 1133 VYGPVTTYLSIQVNFDTISKLQLDITLADIAAAIWNTPKLKIPSQQVTV 1181 [128][TOP] >UniRef100_Q4U940 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4U940_THEAN Length = 1648 Score = 138 bits (348), Expect = 3e-31 Identities = 75/145 (51%), Positives = 96/145 (66%) Frame = +1 Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 ++ IS Q+ F+ Y+ E G IGA+G+ SIGEP TQMTLKTFHFAGVASMN Sbjct: 1269 VNRISLEQMFEFIRYSWKDYQKSLCEPGEAIGALGSQSIGEPATQMTLKTFHFAGVASMN 1328 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 VTLGVPRI EIIN S I TPII LE + A VK +IEKTTLGQ+ +IK + T Sbjct: 1329 VTLGVPRIQEIINATSLIATPIIEVPLEDKTSYEFALKVKSKIEKTTLGQICLNIKQLYT 1388 Query: 439 SRSAALFISLDEKIIEEAYLNIDSN 513 +++ L +L+ +IE+ +L I+SN Sbjct: 1389 PQNSKLLFTLNRNLIEQLHLEINSN 1413 [129][TOP] >UniRef100_B2ADZ3 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2ADZ3_PODAN Length = 1521 Score = 138 bits (348), Expect = 3e-31 Identities = 70/158 (44%), Positives = 103/158 (65%), Gaps = 1/158 (0%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S L F+++CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1093 VSEASLRKFIELCLEKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1152 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+IT +LE +++ AR VK RIEKT + + + V Sbjct: 1153 GVPRIKEIINASKTISTPVITCVLENTKDVSAARAVKHRIEKTYIKDILDYVDDVWLQDV 1212 Query: 448 AALFISLDEKIIEE-AYLNIDSNTVKESILQTGKLKLK 558 A + + L++ +E + I + + ++I++ KLKLK Sbjct: 1213 AKIVLRLEKDGLENLEQIGITTTDIADAIVKAKKLKLK 1250 [130][TOP] >UniRef100_Q2U3T5 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae RepID=Q2U3T5_ASPOR Length = 1447 Score = 138 bits (347), Expect = 4e-31 Identities = 67/155 (43%), Positives = 99/155 (63%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ + L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1043 LTEKTLRTFISACLMKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1102 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+++ L T DN+ AR+VKGRIEKT L + ++ T + Sbjct: 1103 GVPRIKEIINASKEISTPVVSCELVTKDNVIAARIVKGRIEKTYLRDITHYVRETWTGKE 1162 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + + ++ K I++ L + + +I + K Sbjct: 1163 AYITVKINWKTIQDLALELKIQDILAAIKNHRRFK 1197 [131][TOP] >UniRef100_B8NTG3 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NTG3_ASPFN Length = 1436 Score = 138 bits (347), Expect = 4e-31 Identities = 67/155 (43%), Positives = 99/155 (63%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ + L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1043 LTEKTLRTFISACLMKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1102 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+++ L T DN+ AR+VKGRIEKT L + ++ T + Sbjct: 1103 GVPRIKEIINASKEISTPVVSCELVTKDNVIAARIVKGRIEKTYLRDITHYVRETWTGKE 1162 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + + ++ K I++ L + + +I + K Sbjct: 1163 AYITVKINWKTIQDLALELKIQDILAAIKNHRRFK 1197 [132][TOP] >UniRef100_Q0V3B7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0V3B7_PHANO Length = 1473 Score = 136 bits (343), Expect = 1e-30 Identities = 70/166 (42%), Positives = 106/166 (63%) Frame = +1 Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 I+ IS+ L+ F+D+CL++Y +++ G +GAIGA SIGEPGTQMTLKTFHFAGVA M+ Sbjct: 1073 IAKISQTALDTFIDLCLTKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMS 1132 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 +T GVPRI EIIN +S I TP+IT +L + + AR+VK R+EKT L + ++ V Sbjct: 1133 ITQGVPRIKEIINASSTISTPVITCVLSNKISESAARIVKARVEKTYLRDIINYVEDVWH 1192 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 A + + +D + +++I + + +I + LK + K+ Sbjct: 1193 PTGAYVAMRIDWDTVNALFVDITPHEIVNAINKHKPLKWGKAGTKV 1238 [133][TOP] >UniRef100_C9SQ00 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SQ00_9PEZI Length = 1456 Score = 136 bits (343), Expect = 1e-30 Identities = 69/170 (40%), Positives = 106/170 (62%) Frame = +1 Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246 + R++ +S L++F+ +CL +Y+ +E G +GA+GA SIGEPGTQMTLKTFHFAGV Sbjct: 1048 YADRVAKVSENTLKLFIKLCLEKYKKAHVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGV 1107 Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426 A M++T GVPRI EIIN + I TP+I L + + AR+VK RIEKT + + I+ Sbjct: 1108 AGMSITQGVPRIKEIINASKLISTPVIKCPLVQNKEMRAARIVKARIEKTYVSDILSYIE 1167 Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + + + +D + + L I + V E+I + KLK++ ++ I Sbjct: 1168 DEWMANAGNVVLQIDMDALSDMQLGIGIHDVAEAICRHRKLKVQRGDLHI 1217 [134][TOP] >UniRef100_B2VYJ3 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VYJ3_PYRTR Length = 1471 Score = 136 bits (343), Expect = 1e-30 Identities = 72/158 (45%), Positives = 102/158 (64%) Frame = +1 Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258 I+ ISR L+ F+ +C S+Y +++ G +GAIGA SIGEPGTQMTLKTFHFAGVA M+ Sbjct: 1072 IAKISRSALDTFIALCWSKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMS 1131 Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 +T GVPRI EIIN +S I TP+I LE + +AR VK RIEKT L V + ++ V Sbjct: 1132 ITQGVPRIKEIINASSTISTPVIDCELENKVSERVAREVKARIEKTYLRDVIRYVEDVWY 1191 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + + +D I++ ++++ + +K +I LK Sbjct: 1192 PEGAYVAMRIDWDTIQKLFIDVKPHEIKAAISAHKPLK 1229 [135][TOP] >UniRef100_C8VPJ2 Putative uncharacterized protein n=2 Tax=Emericella nidulans RepID=C8VPJ2_EMENI Length = 1445 Score = 135 bits (340), Expect = 2e-30 Identities = 72/179 (40%), Positives = 108/179 (60%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 D + +K LN+ ++ R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQM Sbjct: 1030 DERTIKGLNH----TGKLTERTLRTFIAECLMKYKKAQVEPGHAVGAVGAQSIGEPGTQM 1085 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L NI ARM KGRIEKT Sbjct: 1086 TLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVISCELVEKRNIVAARMAKGRIEKT 1145 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573 L + ++ T + A L + ++ I L++ ++++I + K ++ +++ Sbjct: 1146 FLRDIIHYVRETWTGKEAYLTVKINWDTISALELDLTVGKIRQAIENHRRFKSEDLKLR 1204 [136][TOP] >UniRef100_A1CLD8 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1CLD8_ASPCL Length = 1449 Score = 135 bits (339), Expect = 3e-30 Identities = 71/179 (39%), Positives = 108/179 (60%) Frame = +1 Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216 D + K LN+ ++ + L F+ CL +Y+ ++E G +GA+GA SIGEPGTQM Sbjct: 1030 DERSQKGLNH----TGKLTEKTLRTFIAACLLKYKRAQVEPGHAVGAVGAQSIGEPGTQM 1085 Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396 TLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L T DN+ AR+VKGRIEKT Sbjct: 1086 TLKTFHFAGVAGMSITQGVPRIKEIINASKAISTPVISCDLVTKDNVIAARIVKGRIEKT 1145 Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573 L + ++ T + A + + ++ + I+ L + + + +I + K + + + Sbjct: 1146 FLRDIIHYVRETWTGKEAYITVKINWETIQNLALELKIHHIVAAIKNHKRFKADDLKFR 1204 [137][TOP] >UniRef100_C5LQF1 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LQF1_9ALVE Length = 1133 Score = 132 bits (331), Expect = 3e-29 Identities = 72/154 (46%), Positives = 94/154 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ QL F+ C +YR +E G +GA A SIGEP TQMTLKTFHFAGVASMNVTL Sbjct: 719 LTEAQLRSFMTTCARKYRRALMEPGEAVGATSAQSIGEPATQMTLKTFHFAGVASMNVTL 778 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A +I TPII+ LE D A MVK +I++T LG + + IK V Sbjct: 779 GVPRIKEIINAAKHISTPIISCKLEQDRVEAAAFMVKSKIQRTLLGDICEYIKQVYEPSG 838 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549 L + L + + L++ + +KE++ G L Sbjct: 839 VYLIVKLCGETLRRMQLDLTMDELKEALCAKGAL 872 [138][TOP] >UniRef100_C5KZ53 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KZ53_9ALVE Length = 1719 Score = 132 bits (331), Expect = 3e-29 Identities = 72/154 (46%), Positives = 94/154 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ QL F+ C +YR +E G +GA A SIGEP TQMTLKTFHFAGVASMNVTL Sbjct: 990 LTEAQLRSFMTTCARKYRRALMEPGEAVGATSAQSIGEPATQMTLKTFHFAGVASMNVTL 1049 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN A +I TPII+ LE D A MVK +I++T LG + + IK V Sbjct: 1050 GVPRIKEIINAAKHISTPIISCKLEQDRVEAAAFMVKSKIQRTLLGDICEYIKQVYEPSG 1109 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549 L + L + + L++ + +KE++ G L Sbjct: 1110 VYLIVKLCGETLRRMQLDLTMDELKEALCAKGAL 1143 [139][TOP] >UniRef100_Q1DVM7 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis RepID=Q1DVM7_COCIM Length = 1430 Score = 132 bits (331), Expect = 3e-29 Identities = 67/148 (45%), Positives = 95/148 (64%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1041 LSAKTLTTFITSCLTKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1100 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TPIIT L +++ A++VKGR+EKT + + I+ TS Sbjct: 1101 GVPRIKEIINASKEISTPIITCELVNKEDVRAAQIVKGRVEKTFIKDIIYYIEEAWTSSV 1160 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESI 531 A + I +D I+ L + + +I Sbjct: 1161 AYINIKIDFSTIQALQLELTLRDILNAI 1188 [140][TOP] >UniRef100_B6QI35 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QI35_PENMQ Length = 1439 Score = 132 bits (331), Expect = 3e-29 Identities = 69/170 (40%), Positives = 98/170 (57%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 + + +S L F+ CL +Y KIE G +GA+GA SIGEPGTQMTLKTFHFAGV Sbjct: 1035 LDHVGKLSEGSLRYFIKSCLFKYEKAKIEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVG 1094 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 ++ +T GVPRI EIIN + I TP+IT L ++ AR+ KGRIEKT L + I+ Sbjct: 1095 NLALTQGVPRIKEIINASKEISTPVITCHLAIPHELHAARIAKGRIEKTFLRDIIHYIRE 1154 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 T + + + L+ IE L + +K++I + K + + +L Sbjct: 1155 SWTDKEGYITVKLNWDTIENLQLELSLRQIKDAITSHRRFKGSDLTVDVL 1204 [141][TOP] >UniRef100_B6H2R1 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H2R1_PENCW Length = 1448 Score = 132 bits (331), Expect = 3e-29 Identities = 72/155 (46%), Positives = 96/155 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1043 LTETTLRAFITACLLKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1102 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP++ L + AR+VKGRIEKT L V SI V + Sbjct: 1103 GVPRIKEIINASREISTPVVACELVNRGSTIAARIVKGRIEKTFLQDVIHSITEVWSPDD 1162 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A L + L+ K IE+ L I + + E+I + K Sbjct: 1163 AYLKVVLNWKTIEDLALEITTPQIVEAIKTNKRFK 1197 [142][TOP] >UniRef100_Q18566 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=Q18566_CAEEL Length = 1400 Score = 130 bits (328), Expect = 6e-29 Identities = 78/179 (43%), Positives = 105/179 (58%), Gaps = 3/179 (1%) Frame = +1 Query: 4 NTKLTETITEDDPKHLKNLNNFIPRI---SGISRRQLEVFLDICLSRYRFKKIEAGTPIG 174 N + + T++ K KNL + + S +++ QL F+++C + E GT +G Sbjct: 988 NHETADLKTKESCKICKNLEAYKTSLLANSCLTKTQLCSFIELCYYKVARAITEPGTAVG 1047 Query: 175 AIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDN 354 AI A SIGEP TQMTLKTFHFAGVASMN+T GVPRI EIIN I TPIITA L + Sbjct: 1048 AIAATSIGEPSTQMTLKTFHFAGVASMNITQGVPRIKEIINAVKTISTPIITAALLDPYD 1107 Query: 355 INIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESI 531 ++AR VK RIEKTTLG++ I+ V L + L+ K I L + ++ +I Sbjct: 1108 ESLARRVKARIEKTTLGEICDYIEEVYLPDDYFLLVKLNSKRIRLLQLEVCMESISYAI 1166 [143][TOP] >UniRef100_C5PCH6 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5PCH6_COCP7 Length = 1444 Score = 130 bits (327), Expect = 7e-29 Identities = 66/148 (44%), Positives = 94/148 (63%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1041 LSAKTLTTFITSCLTKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1100 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TPIIT L +++ A++VKGR+EKT + + I+ T Sbjct: 1101 GVPRIKEIINASKEISTPIITCELVNKEDVRAAQIVKGRVEKTFIKDIIYYIEEAWTGSV 1160 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESI 531 A + I +D I+ L + + +I Sbjct: 1161 AYINIKIDFSTIQALQLELTLRDILNAI 1188 [144][TOP] >UniRef100_C1GX38 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1GX38_PARBA Length = 1425 Score = 130 bits (327), Expect = 7e-29 Identities = 69/155 (44%), Positives = 95/155 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 IS R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1008 ISARTLAAFITSCLVKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1067 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + V I+ T Sbjct: 1068 GVPRIKEIINASKEISTPVITCQLVNKGDLRAAQIVKGRVEKTFMRDVIYYIEEDWTGND 1127 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + I +D I+ L + + +I + + K Sbjct: 1128 AYINIKIDFSTIQNLQLELGLQDILAAIKKHKRFK 1162 [145][TOP] >UniRef100_C1GGI7 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GGI7_PARBD Length = 1458 Score = 130 bits (327), Expect = 7e-29 Identities = 68/155 (43%), Positives = 95/155 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 IS R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1041 ISARTLAAFITSCLVKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1100 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T Sbjct: 1101 GVPRIKEIINASKEISTPVITCQLVNKGDLRAAQIVKGRVEKTFMRDIIYYIEEDWTGND 1160 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + I +D I+ L + + +I + + K Sbjct: 1161 AYINIKIDFSTIQNLQLELGLQDILSAIKKHKRFK 1195 [146][TOP] >UniRef100_C0SHD3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SHD3_PARBP Length = 1449 Score = 130 bits (327), Expect = 7e-29 Identities = 68/155 (43%), Positives = 95/155 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 IS R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1032 ISARTLAAFITSCLVKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1091 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T Sbjct: 1092 GVPRIKEIINASKEISTPVITCQLVNKGDLRAAQIVKGRVEKTFMRDIIYYIEEDWTGND 1151 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + I +D I+ L + + +I + + K Sbjct: 1152 AYINIKIDFSTIQNLQLELGLQDILSAIKKHKRFK 1186 [147][TOP] >UniRef100_C6HPI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HPI8_AJECH Length = 1333 Score = 130 bits (326), Expect = 1e-28 Identities = 67/155 (43%), Positives = 96/155 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S R L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 915 VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 974 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T Sbjct: 975 GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE 1034 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + I +D I+ L + + +I + + K Sbjct: 1035 AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFK 1069 [148][TOP] >UniRef100_C5GRI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3 RepID=C5GRI8_AJEDR Length = 1456 Score = 130 bits (326), Expect = 1e-28 Identities = 67/161 (41%), Positives = 99/161 (61%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 I + +S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA Sbjct: 1032 IDHTAKVSTKALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1091 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 M++T GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ Sbjct: 1092 GMSITQGVPRIKEIINASKEISTPVITCELVNKHDLRAAQIVKGRVEKTFIRDIIYYIEE 1151 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 T A + I +D I+ L ++ + +I + + K Sbjct: 1152 DWTGNEAYINIKIDFSTIQNLQLELNLQDILVAIKKHKRFK 1192 [149][TOP] >UniRef100_C4JWU1 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JWU1_UNCRE Length = 1435 Score = 130 bits (326), Expect = 1e-28 Identities = 67/154 (43%), Positives = 96/154 (62%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 I + +S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA Sbjct: 1035 ISHTAKLSAKTLTAFVTSCLTKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1094 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 M++T GVPRI EIIN + I TPIIT L +++ A++VKGR+EKT + + I+ Sbjct: 1095 GMSITQGVPRIKEIINASKEISTPIITCELVNKEDLRAAQIVKGRVEKTFIKDIIYYIEE 1154 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESI 531 T A + I +D I+ L + + +I Sbjct: 1155 AWTGSVAYINIKIDFSAIQALQLELTLRDILNAI 1188 [150][TOP] >UniRef100_C0NZL8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NZL8_AJECG Length = 1456 Score = 130 bits (326), Expect = 1e-28 Identities = 67/155 (43%), Positives = 96/155 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S R L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1038 VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1097 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T Sbjct: 1098 GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE 1157 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + I +D I+ L + + +I + + K Sbjct: 1158 AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFK 1192 [151][TOP] >UniRef100_A6RGX8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6RGX8_AJECN Length = 1439 Score = 130 bits (326), Expect = 1e-28 Identities = 67/155 (43%), Positives = 96/155 (61%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S R L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1021 VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1080 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T Sbjct: 1081 GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE 1140 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 A + I +D I+ L + + +I + + K Sbjct: 1141 AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFK 1175 [152][TOP] >UniRef100_UPI000022105F Hypothetical protein CBG05787 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI000022105F Length = 1402 Score = 129 bits (325), Expect = 1e-28 Identities = 73/151 (48%), Positives = 93/151 (61%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261 S ++R QL F+ +C + E GT +GAI A SIGEP TQMTLKTFHFAGVASMN+ Sbjct: 1017 SCLTRSQLLSFIQLCYYKIARAITEPGTAVGAIAATSIGEPSTQMTLKTFHFAGVASMNI 1076 Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 T GVPRI EIIN I TPIITA L + ++AR VK RIEKTTLG++ I+ V Sbjct: 1077 TQGVPRIKEIINAVKTISTPIITASLLDPYDESLARRVKARIEKTTLGEICDYIEEVYLP 1136 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESIL 534 L + L+ K I L + ++ +I+ Sbjct: 1137 DDYFLLVKLNSKRIRLLQLEVSLESISYAIV 1167 [153][TOP] >UniRef100_A8X1M6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae RepID=A8X1M6_CAEBR Length = 1435 Score = 129 bits (325), Expect = 1e-28 Identities = 73/151 (48%), Positives = 93/151 (61%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261 S ++R QL F+ +C + E GT +GAI A SIGEP TQMTLKTFHFAGVASMN+ Sbjct: 1034 SCLTRSQLLSFIQLCYYKIARAITEPGTAVGAIAATSIGEPSTQMTLKTFHFAGVASMNI 1093 Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 T GVPRI EIIN I TPIITA L + ++AR VK RIEKTTLG++ I+ V Sbjct: 1094 TQGVPRIKEIINAVKTISTPIITASLLDPYDESLARRVKARIEKTTLGEICDYIEEVYLP 1153 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESIL 534 L + L+ K I L + ++ +I+ Sbjct: 1154 DDYFLLVKLNSKRIRLLQLEVSLESISYAIV 1184 [154][TOP] >UniRef100_C5JRK1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081 RepID=C5JRK1_AJEDS Length = 1456 Score = 129 bits (324), Expect = 2e-28 Identities = 67/161 (41%), Positives = 98/161 (60%) Frame = +1 Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249 I + +S L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA Sbjct: 1032 IDHTAKVSTNALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1091 Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 M++T GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ Sbjct: 1092 GMSITQGVPRIKEIINASKEISTPVITCELVNKHDLRAAQIVKGRVEKTFIRDIIYYIEE 1151 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 T A + I +D I+ L ++ + +I + + K Sbjct: 1152 DWTGNEAYINIKIDFSTIQNLQLELNLQDILVAIKKHKRFK 1192 [155][TOP] >UniRef100_C5FEK3 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FEK3_NANOT Length = 1443 Score = 128 bits (322), Expect = 3e-28 Identities = 68/139 (48%), Positives = 89/139 (64%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S R L+ F+ CL +Y +E G IGAIGA SIGEPGTQMTLKTFHFAGVA M++T Sbjct: 1036 LSARTLKAFIASCLDKYMRAHVEPGHSIGAIGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1095 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPRI EIIN + I TPIIT L ++ A +VKGRIEK L + I+ + + + Sbjct: 1096 GVPRIKEIINASKEISTPIITCELTNKTDMRAAEIVKGRIEKLFLKDIVYYIEEIRSEST 1155 Query: 448 AALFISLDEKIIEEAYLNI 504 + + I +D I++ L I Sbjct: 1156 SFIKIKVDFSTIDKLQLEI 1174 [156][TOP] >UniRef100_D0A1W8 DNA-directed RNA polymerase iii largest subunit (Rna polymerase iii largest subunit, putative) n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=D0A1W8_TRYBG Length = 1530 Score = 125 bits (314), Expect = 2e-27 Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 8/183 (4%) Frame = +1 Query: 10 KLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAH 189 K+ ++ E L++L + ++R + F+ C S+Y K E GTP GAI A Sbjct: 1092 KVKDSKEEGRVSELRDLEMLQTELLPLTRGMVTRFIAQCASKYLRKACEPGTPCGAIAAQ 1151 Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA---ILETDDN-- 354 S+GEP TQMTL+TFHFAGVASM++T GVPR++E+IN NI TP++TA ++E ++N Sbjct: 1152 SVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEVINANRNIATPVVTAPVLLMEGEENHC 1211 Query: 355 ---INIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKE 525 AR VK +IE+ L +V I V + L + L+ +I + +L I++ TV++ Sbjct: 1212 EIFRKRARFVKAQIERVLLREVVSEIVEVCSDTEFYLRVHLNMSVITKLHLPINAITVRQ 1271 Query: 526 SIL 534 IL Sbjct: 1272 RIL 1274 [157][TOP] >UniRef100_Q38BW7 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei RepID=Q38BW7_9TRYP Length = 1530 Score = 124 bits (310), Expect = 7e-27 Identities = 70/170 (41%), Positives = 104/170 (61%), Gaps = 8/170 (4%) Frame = +1 Query: 49 LKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKT 228 L++L + ++R + F+ C S+Y K E GTP GAI A S+GEP TQMTL+T Sbjct: 1105 LRDLEMLQTELLPLTRGMVTRFIAQCASKYLRKACEPGTPCGAIAAQSVGEPSTQMTLRT 1164 Query: 229 FHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA---ILETDDN-----INIARMVKGR 384 FHFAGVASM++T GVPR++E+IN NI TP++TA ++E ++N AR VK + Sbjct: 1165 FHFAGVASMSITQGVPRLVEVINANRNIATPVVTAPVLLMEGEENHCEIFRKRARFVKAQ 1224 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534 IE+ L +V I V + L + L+ +I + +L I++ TV++ IL Sbjct: 1225 IERVLLREVVSEIVEVCSDTEFYLRVHLNMSVITKLHLPINAITVRQRIL 1274 [158][TOP] >UniRef100_P08968 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Trypanosoma brucei brucei RepID=RPC1_TRYBB Length = 1530 Score = 124 bits (310), Expect = 7e-27 Identities = 70/170 (41%), Positives = 104/170 (61%), Gaps = 8/170 (4%) Frame = +1 Query: 49 LKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKT 228 L++L + ++R + F+ C S+Y K E GTP GAI A S+GEP TQMTL+T Sbjct: 1105 LRDLEMLQTELLPLTRGMVTRFIAQCASKYLRKACEPGTPCGAIAAQSVGEPSTQMTLRT 1164 Query: 229 FHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA---ILETDDN-----INIARMVKGR 384 FHFAGVASM++T GVPR++E+IN NI TP++TA ++E ++N AR VK + Sbjct: 1165 FHFAGVASMSITQGVPRLVEVINANRNIATPVVTAPVLLMEGEENHCEIFRKRARFVKAQ 1224 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534 IE+ L +V I V + L + L+ +I + +L I++ TV++ IL Sbjct: 1225 IERVLLREVVSEIVEVCSDTEFYLRVHLNMSVITKLHLPINAITVRQRIL 1274 [159][TOP] >UniRef100_C4V991 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V991_NOSCE Length = 1335 Score = 123 bits (308), Expect = 1e-26 Identities = 65/155 (41%), Positives = 94/155 (60%) Frame = +1 Query: 91 SRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLG 270 +R +F D+ + + IE GT +GAI SIGEPGTQMTLKTFHFAGVASMN+TLG Sbjct: 985 TREFFNLFFDLIKQKIKNCLIEPGTAVGAIAGQSIGEPGTQMTLKTFHFAGVASMNITLG 1044 Query: 271 VPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSA 450 VPR++EIIN NI TPII L+ +D +N A++VKGR+ K + + Sbjct: 1045 VPRLIEIINAVVNINTPIINVSLDKNDLLN-AQIVKGRVLKVLFKDICNHVTDSVCKDGI 1103 Query: 451 ALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKL 555 + +D +I + L ID ++K+++ T ++ + Sbjct: 1104 FIDFKIDLNLINKLRLQIDMKSIKQNLNITEQITI 1138 [160][TOP] >UniRef100_C4QF52 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QF52_SCHMA Length = 1342 Score = 122 bits (307), Expect = 2e-26 Identities = 73/166 (43%), Positives = 99/166 (59%) Frame = +1 Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234 N +N I + ++R QL +FL +Y IE GT +GA+ S+GEP TQMTLKTFH Sbjct: 1004 NGSNLINQNERLTRTQLRIFLTHVKEKYEKALIEPGTAVGALCGQSVGEPATQMTLKTFH 1063 Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414 FAGVASMN+T GVPR+ EI+N A+ IKTP+I L + ++AR VK IE T L ++ Sbjct: 1064 FAGVASMNITQGVPRMREIVNAAARIKTPLICVTLTDPFSASLARQVKLSIEPTRLADIS 1123 Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 S+ T + I LD+K ++ I + V +I QT KLK Sbjct: 1124 LSLSQCLTPEYVYVAIKLDKKRMDRR--GITTPQVATAI-QTTKLK 1166 [161][TOP] >UniRef100_Q8SRM3 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi RepID=Q8SRM3_ENCCU Length = 1349 Score = 121 bits (304), Expect = 3e-26 Identities = 63/146 (43%), Positives = 91/146 (62%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S+ +E F + + +E GT +GAI SIGEPGTQMTLKTFHFAGVASMN+TL Sbjct: 998 LSKDFIETFFSMVSQKMMNLIVEPGTTVGAIAGQSIGEPGTQMTLKTFHFAGVASMNITL 1057 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447 GVPR+ EIIN NI TPII A L+ ++ ++KGR+++ +L V S+ V + Sbjct: 1058 GVPRLKEIINAVCNISTPIINAELDDPHDLFRTEVIKGRLDRISLKDVCSSLTEVISKDE 1117 Query: 448 AALFISLDEKIIEEAYLNIDSNTVKE 525 L I +D + + LN+D + +++ Sbjct: 1118 IFLDIRVDLESLSRLKLNLDIHKIEK 1143 [162][TOP] >UniRef100_A8IFE0 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IFE0_CHLRE Length = 1167 Score = 119 bits (299), Expect = 1e-25 Identities = 61/82 (74%), Positives = 69/82 (84%), Gaps = 1/82 (1%) Frame = +1 Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAI-LETDDNINIA 366 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII + L D+++ A Sbjct: 829 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAARTISTPIIKVVALAVDNDVKAA 888 Query: 367 RMVKGRIEKTTLGQVAKSIKVV 432 R+VKGR+EKTTLGQVA+ IK+V Sbjct: 889 RLVKGRLEKTTLGQVARHIKIV 910 [163][TOP] >UniRef100_Q4DZA9 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi RepID=Q4DZA9_TRYCR Length = 1553 Score = 117 bits (293), Expect = 6e-25 Identities = 70/164 (42%), Positives = 93/164 (56%), Gaps = 23/164 (14%) Frame = +1 Query: 112 FLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEI 291 FL C S+Y K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T GVPR++EI Sbjct: 1132 FLAQCASKYILKACEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEI 1191 Query: 292 INGASNIKTPIITAIL--------------------ETDDNINI---ARMVKGRIEKTTL 402 IN NI TP++TA + E D R VK ++E+ L Sbjct: 1192 INANRNIATPVVTAPVRRHRRGKSLSIKQEVVGESCEEDSQEEFEKRVRRVKSQVERVLL 1251 Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534 +VA I V TS L + L+ +I + +L I++ TV++ IL Sbjct: 1252 KEVASEIVEVCTSTEFYLRVHLNMSLIAKLWLPINAITVRQRIL 1295 [164][TOP] >UniRef100_Q22M85 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22M85_TETTH Length = 1418 Score = 116 bits (290), Expect = 1e-24 Identities = 68/165 (41%), Positives = 102/165 (61%), Gaps = 4/165 (2%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 I++RQ+ F RY +E G +GA+GA SI EP TQMTLK+FHFAGVASMN+T Sbjct: 1020 ITKRQINYFFKTLWERYPQMLVEPGEAVGAVGATSISEPATQMTLKSFHFAGVASMNITQ 1079 Query: 268 GVPRIMEIINGASNIKTPII-TAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444 GVPR+ EII+ A I TPII +L + + R ++ +IEKT LG+++ + V + + Sbjct: 1080 GVPRMKEIIDAAKKISTPIIDVKLLPQFQSEHSYRSIRLQIEKTYLGEISNFYQEVYSPK 1139 Query: 445 SAALFISLDEKIIEEAY---LNIDSNTVKESILQTGKLKLKEKEI 570 L+I ++K +E+ L I +++K+ IL+ K +KE +I Sbjct: 1140 DCHLYIEYNKKKLEQFRLYGLEIPLSSIKKGILEIAK-DIKEDQI 1183 [165][TOP] >UniRef100_A4I9K6 DNA-directed RNA polymerase n=1 Tax=Leishmania infantum RepID=A4I9K6_LEIIN Length = 1590 Score = 116 bits (290), Expect = 1e-24 Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 13/157 (8%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +++ L FL+ + K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T Sbjct: 1120 LTKGMLLHFLEASARKVHRKLCEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQ 1179 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI-------------NIARMVKGRIEKTTLGQ 408 GVPR++EIIN +I TP+ITA + +D AR VKG +E+ L + Sbjct: 1180 GVPRLVEIINANKSIATPVITAPIVLEDEFTSIDLAPASRTQYQAARAVKGLMERVLLKE 1239 Query: 409 VAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTV 519 +A+ + V T R+ + I L+ ++IE L ID+ V Sbjct: 1240 IAREMVEVVTPRAYYIHIFLNMELIERLLLPIDAAVV 1276 [166][TOP] >UniRef100_Q4Q3H2 DNA-directed RNA polymerase n=1 Tax=Leishmania major RepID=Q4Q3H2_LEIMA Length = 1582 Score = 114 bits (286), Expect = 4e-24 Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 13/157 (8%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +++ L FL+ + K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T Sbjct: 1115 LTKGMLLHFLEASARKVHRKLCEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQ 1174 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI-------------NIARMVKGRIEKTTLGQ 408 GVPR++EIIN +I TP+ITA + +D AR VKG +E+ L + Sbjct: 1175 GVPRLVEIINANKSIATPVITAPIVLEDEFTSIDLASASRTQYQAARAVKGLMERVLLKE 1234 Query: 409 VAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTV 519 + + + V T R+ + I L+ ++IE L ID+ V Sbjct: 1235 ITREMVEVVTPRAYYIHIFLNMELIERLLLPIDAAVV 1271 [167][TOP] >UniRef100_A4HAF0 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis RepID=A4HAF0_LEIBR Length = 1581 Score = 114 bits (285), Expect = 5e-24 Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 13/157 (8%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R L F + + K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T Sbjct: 1114 LTRGMLLRFFEDSARKVHRKLCEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQ 1173 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI-------------NIARMVKGRIEKTTLGQ 408 GVPR++EIIN NI TP+ITA + +D AR VKG +E+ L + Sbjct: 1174 GVPRLVEIINANKNIATPVITAPILLEDEFTSIDLASARRTQYQAARAVKGLMERVLLKE 1233 Query: 409 VAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTV 519 + + + V T R + I LD +IE L ID+ V Sbjct: 1234 ITREMVEVVTPRQYYIQIFLDIGLIERLLLPIDAAVV 1270 [168][TOP] >UniRef100_C6LP76 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LP76_GIALA Length = 1742 Score = 113 bits (283), Expect = 9e-24 Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 14/169 (8%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 I+R+ ++ FL +Y +E G+P GA+ A S+GEP TQMTLK+FH AG+ASMN+T Sbjct: 1267 ITRKDIDDFLRQVRRKYIRLNLEPGSPCGAVAAQSVGEPSTQMTLKSFHHAGLASMNITQ 1326 Query: 268 GVPRIMEIINGASNIKTPIITAILE------------TDDNINIARMVKGRIEKTTLGQV 411 GVPR+ EI++G I TPI T L T+ + ARM+K IE T LGQ+ Sbjct: 1327 GVPRLKEIVDGVVKISTPITTVELHIDADEEEDPAIITEKYLEKARMMKNIIECTYLGQI 1386 Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLN--IDSNTVKESILQTGKLK 552 + SI + S + ++LD KII + L I TV SIL K K Sbjct: 1387 SASIIECYSQSSCHIEVNLDMKIIADMGLAGVITVETVVASILHNDKAK 1435 [169][TOP] >UniRef100_A9CTM9 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348 RepID=A9CTM9_ENTBH Length = 1174 Score = 110 bits (274), Expect = 1e-22 Identities = 58/98 (59%), Positives = 70/98 (71%) Frame = +1 Query: 145 KKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPI 324 K IE GT +GAI A SIGEPGTQMTLKTFHFAGVASMN+TLGVPRI EIIN S I TPI Sbjct: 847 KFIEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINATSTISTPI 906 Query: 325 ITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 I+ + N+ A ++K ++EK L + K I ++ T Sbjct: 907 ISV---KNVNLQDAYIIKQKLEKNVLKDIIKRIDIMYT 941 [170][TOP] >UniRef100_P25202 DNA-directed RNA polymerase III subunit RPC1 n=2 Tax=Giardia intestinalis RepID=RPC1_GIALA Length = 1741 Score = 109 bits (272), Expect = 2e-22 Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 14/169 (8%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++++ ++ FL +Y +E G+P GA+ A S+GEP TQMTLK+FH AG+ASMN+T Sbjct: 1267 LTKKDIDDFLRQVRRKYIRLNLEPGSPCGAVAAQSVGEPSTQMTLKSFHHAGLASMNITQ 1326 Query: 268 GVPRIMEIINGASNIKTPIITAILE------------TDDNINIARMVKGRIEKTTLGQV 411 GVPR+ EI++G I TPI T L T+ + ARM+K IE T LGQ+ Sbjct: 1327 GVPRLKEIVDGVVKISTPITTVELHVDVDKEELAATVTEKYLEKARMMKNIIECTYLGQI 1386 Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLN--IDSNTVKESILQTGKLK 552 + SI + + ++LD KII + L I TV SIL K K Sbjct: 1387 SASIIECYSQSVCHIEVNLDMKIIADMGLAGIITVETVVASILHNDKAK 1435 [171][TOP] >UniRef100_Q0U9K8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0U9K8_PHANO Length = 1720 Score = 108 bits (270), Expect = 3e-22 Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +S++ L+ L R+ + G +G + A SIGEP TQMTL TFHFAGV+S NVTL Sbjct: 1058 LSKKALDYILGELQDRFLKAAVAPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTL 1117 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI--NIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A+NIKTP + + +TD N A++++ RIE TTL + +S+++ Sbjct: 1118 GVPRLKEILNIAANIKTPSM-LVRQTDKNAGQQEAKVLRSRIELTTLRSLTQSVELYYDP 1176 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKES 528 A + D+ ++E ++ + N V ES Sbjct: 1177 EIQATLVESDQDMVESYFIVPEENEVIES 1205 [172][TOP] >UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151A8B3 Length = 1018 Score = 106 bits (265), Expect = 1e-21 Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 304 LNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 363 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T LE D +I A++V+ IE TTL V S ++ Sbjct: 364 GVPRLKEILNVAKNIKTPALTVYLEKDIAADIEKAKVVQSAIEHTTLKNVTASTEIFYDP 423 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 + + D + EAY I V+ESI L+ + K+ +K++ Sbjct: 424 DPRSTVLEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 474 [173][TOP] >UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E6J4_LODEL Length = 1745 Score = 106 bits (265), Expect = 1e-21 Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 11/158 (6%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 ++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N Sbjct: 1046 TQFQKSVVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKN 1105 Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 IKTP +T L E +I +A++V+ IE TTL V S ++ I D + Sbjct: 1106 IKTPALTVYLDPEVASDIELAKIVQSSIEHTTLKNVTSSTEIYYDPDPRTTVIEEDYDTV 1165 Query: 484 EEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 EAY I V+ESI L+ + K+ +K++ Sbjct: 1166 -EAYFAIPDQKVEESIEKQSPWLLRLELDRAKMLDKQL 1202 [174][TOP] >UniRef100_B7R290 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Thermococcus sp. AM4 RepID=B7R290_9EURY Length = 391 Score = 106 bits (265), Expect = 1e-21 Identities = 54/142 (38%), Positives = 90/142 (63%), Gaps = 2/142 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + + ++E ++ ++ Y+ +E G PIG + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 37 LKKAEVEAIIEDAVNEYKRALVEPGEPIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PRI+EI++ N TP++T L+ D ++ AR V RIE TT+ +A+ + + Sbjct: 97 GLPRIIEIVDARKNPSTPVMTVFLDEDHRHDLEKAREVARRIEGTTIENLAREMSI--DI 154 Query: 442 RSAALFISLDEKIIEEAYLNID 507 + + LD + +E++ L+++ Sbjct: 155 LNFEFIVELDPERLEKSGLDME 176 [175][TOP] >UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1 Tax=Pichia guilliermondii RepID=RPB1_PICGU Length = 1579 Score = 106 bits (265), Expect = 1e-21 Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 870 LNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 929 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T LE D +I A++V+ IE TTL V S ++ Sbjct: 930 GVPRLKEILNVAKNIKTPALTVYLEKDIAADIEKAKVVQSAIEHTTLKNVTASTEIFYDP 989 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 + + D + EAY I V+ESI L+ + K+ +K++ Sbjct: 990 DPRSTVLEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1040 [176][TOP] >UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054 RepID=UPI0000F24379 Length = 1739 Score = 106 bits (264), Expect = 1e-21 Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1038 LNRSSFEWVVGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097 Query: 268 GVPRIMEIINGASNIKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T L+ D+I A++V+ IE T+L V S ++ Sbjct: 1098 GVPRLKEILNVAKNIKTPALTVYLDPALSDDIEKAKVVQSAIEHTSLKNVTSSTEIYYDP 1157 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 I D + EAY +I V+ESI L+ + K+ +K++ Sbjct: 1158 DPRTTVIEEDYDTV-EAYFSIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1208 [177][TOP] >UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BD271 Length = 1749 Score = 106 bits (264), Expect = 1e-21 Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +SR E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1043 LSRISFEWVMGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1102 Query: 268 GVPRIMEIINGASNIKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T LE + +I A++V+ IE TTL V + ++ Sbjct: 1103 GVPRLKEILNVAKNIKTPALTVYLEKESAADIEKAKIVQSAIEHTTLKNVTSATEIFYDP 1162 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 + I D + EAY I V+ESI L+ + K+ +K++ Sbjct: 1163 DPRSTVIEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1213 [178][TOP] >UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RSM9_DEBHA Length = 1749 Score = 106 bits (264), Expect = 1e-21 Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +SR E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1043 LSRISFEWVMGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1102 Query: 268 GVPRIMEIINGASNIKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T LE + +I A++V+ IE TTL V + ++ Sbjct: 1103 GVPRLKEILNVAKNIKTPALTVYLEKESAADIEKAKIVQSAIEHTTLKNVTSATEIFYDP 1162 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 + I D + EAY I V+ESI L+ + K+ +K++ Sbjct: 1163 DPRSTVIEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1213 [179][TOP] >UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3GID7_PICST Length = 1739 Score = 106 bits (264), Expect = 1e-21 Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1038 LNRSSFEWVVGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097 Query: 268 GVPRIMEIINGASNIKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T L+ D+I A++V+ IE T+L V S ++ Sbjct: 1098 GVPRLKEILNVAKNIKTPALTVYLDPALSDDIEKAKVVQSAIEHTSLKNVTSSTEIYYDP 1157 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 I D + EAY +I V+ESI L+ + K+ +K++ Sbjct: 1158 DPRTTVIEEDYDTV-EAYFSIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1208 [180][TOP] >UniRef100_C5A207 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus gammatolerans EJ3 RepID=RPOA2_THEGJ Length = 391 Score = 106 bits (264), Expect = 1e-21 Identities = 53/142 (37%), Positives = 90/142 (63%), Gaps = 2/142 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + + ++E ++ ++ YR +E G PIG + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 37 LKKAEVEAIIEDAVNEYRKALVEPGEPIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINI--ARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PRI+EI++ N TP++T L+ + ++ AR V RIE TT+ +A+ + + Sbjct: 97 GLPRIIEIVDARKNPSTPVMTVFLDEEHRYDLEKAREVARRIEGTTIENLAREMSI--DI 154 Query: 442 RSAALFISLDEKIIEEAYLNID 507 + + +D + +E++ L+++ Sbjct: 155 LNFEFIVEIDPERLEKSGLDME 176 [181][TOP] >UniRef100_Q976A6 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus tokodaii RepID=RPOA2_SULTO Length = 392 Score = 105 bits (262), Expect = 3e-21 Identities = 66/192 (34%), Positives = 112/192 (58%), Gaps = 8/192 (4%) Frame = +1 Query: 10 KLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAH 189 KL + + +D + L N + ++ ++ +D+ + Y+ IE G +G + A Sbjct: 20 KLPDKVIQDLREALLNTD------INLTESDVDKIIDLAVKDYQESLIEPGEAVGIVSAQ 73 Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL------ETDD 351 SIGEPGTQMTL+TFHFAG+ +NVTLG+PR++EI++ TPI+T L + + Sbjct: 74 SIGEPGTQMTLRTFHFAGIRELNVTLGLPRLIEIVDARKTPSTPIMTIYLTDEYKYDKEK 133 Query: 352 NINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESI 531 + IAR +IE T + V SI V T+ S + I LDE+++++ +D ++VK+ I Sbjct: 134 ALEIAR----KIEYTKIENVISSISVDITNMS--ITIQLDEEMLKDK--GVDPSSVKKII 185 Query: 532 --LQTGKLKLKE 561 L+ GK+++++ Sbjct: 186 SKLKLGKIRIED 197 [182][TOP] >UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi RepID=Q8MX30_NAEGR Length = 1590 Score = 105 bits (261), Expect = 3e-21 Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 2/127 (1%) Frame = +1 Query: 154 EAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA 333 + G +G++ A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ E++N A NIKTP +T Sbjct: 1025 QPGEMVGSVAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKELLNVAKNIKTPGLTI 1084 Query: 334 ILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNID 507 L + + A+MVK +E TTLG V + +V A I D + IEE + Sbjct: 1085 YLNNEYIGDFEKAKMVKEDLEYTTLGHVTAAASIVYDPEPANSVIEEDREFIEELLEELK 1144 Query: 508 SNTVKES 528 V +S Sbjct: 1145 DTAVLDS 1151 [183][TOP] >UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q5ACI7_CANAL Length = 1728 Score = 104 bits (260), Expect = 4e-21 Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E + ++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1038 LNRASFEWVMGEIETQFQKSIVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T L E +I A++V+ IE TTL V S ++ Sbjct: 1098 GVPRLKEILNVAKNIKTPAMTVFLDPEVASDIEKAKIVQSAIEHTTLKNVTSSTEIYYDP 1157 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 I D + EAY I V+ESI L+ + K+ +K++ Sbjct: 1158 DPRTTVIEDDYDTV-EAYFAIPDQKVEESIDKQSPWLLRLELDRAKMLDKQL 1208 [184][TOP] >UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=C4YN85_CANAL Length = 1742 Score = 104 bits (260), Expect = 4e-21 Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E + ++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1038 LNRASFEWVMGEIETQFQKSIVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T L E +I A++V+ IE TTL V S ++ Sbjct: 1098 GVPRLKEILNVAKNIKTPAMTVFLDPEVASDIEKAKIVQSAIEHTTLKNVTSSTEIYYDP 1157 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 I D + EAY I V+ESI L+ + K+ +K++ Sbjct: 1158 DPRTTVIEDDYDTV-EAYFAIPDQKVEESIDKQSPWLLRLELDRAKMLDKQL 1208 [185][TOP] >UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R4Y0_PICPG Length = 1743 Score = 104 bits (260), Expect = 4e-21 Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 2/150 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E L ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1039 LNRDAFEWVLGTIEAQFQRSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1098 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINI--ARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T L+ + ++I A++++ IE TTL V + ++ Sbjct: 1099 GVPRLKEILNVAKNIKTPALTVYLDREIALDIEKAKVIQSSIEYTTLKNVTSATEIYYDP 1158 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI 531 + I D + EAY +I V+E+I Sbjct: 1159 DPTSTVIEEDFDTV-EAYFSIPDEKVEETI 1187 [186][TOP] >UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus RepID=Q9BMP2_STYMT Length = 1678 Score = 103 bits (258), Expect = 7e-21 Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 2/120 (1%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 SR+ + G +G+IGA S+GEP TQMTL TFHFAGV++ NVTLGVPR+ EIIN A N Sbjct: 967 SRFDQALVNPGEMVGSIGAQSMGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVAKN 1026 Query: 310 IKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 IKTP + L+ D + IA ++ GRIE TTL V KS + + DE++I Sbjct: 1027 IKTPSMKIFLKDKDKQDERIATIIGGRIEHTTLCHVVKSSAIYYDPDPERTIVREDEELI 1086 [187][TOP] >UniRef100_C5LSN9 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LSN9_9ALVE Length = 1667 Score = 103 bits (258), Expect = 7e-21 Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 2/138 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + +R ++ L R+ + AG +G I A SIGEP TQMTL TFHFAGV S NVTL Sbjct: 1076 LGQRAVDWLLGEVEQRFEKSLVAAGESVGTIAAQSIGEPATQMTLNTFHFAGVGSKNVTL 1135 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EIIN A N+KTP +T L D + A+ V+ +E T+LG++ +++ Sbjct: 1136 GVPRLKEIINVAKNLKTPSMTVYLHPDYASDDAKAKQVQSELEHTSLGKITSYTQILFDP 1195 Query: 442 RSAALFISLDEKIIEEAY 495 + D +++EE Y Sbjct: 1196 DVRTSILEEDRQLVEEYY 1213 [188][TOP] >UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WN64_CANDC Length = 1735 Score = 103 bits (256), Expect = 1e-20 Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 11/172 (6%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E L ++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTL Sbjct: 1038 LNRVSFEWVLGEIETQFQKSIVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A NIKTP +T L E +I A++V+ IE TTL V S ++ Sbjct: 1098 GVPRLKEILNVAKNIKTPAMTVYLDPEVASDIEKAKIVQSAIEHTTLKNVTSSAEIYYDP 1157 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570 I D + EAY I V+E+I L+ + K+ +K++ Sbjct: 1158 DPRTTVIEDDYDTV-EAYFAIPDQKVEETIDKQSPWLLRLELDRAKMLDKQL 1208 [189][TOP] >UniRef100_C4Y5N4 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y5N4_CLAL4 Length = 1402 Score = 102 bits (255), Expect = 2e-20 Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 11/151 (7%) Frame = +1 Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330 + G +G I A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A NIKTP +T Sbjct: 1018 VHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALT 1077 Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504 L+ + +I A++V+ IE TTL V + ++ + I D + EAY I Sbjct: 1078 VYLDPEIASDIEKAKVVQSAIEHTTLKNVTSATEIFYDPDPRSTVIEEDYDTV-EAYFAI 1136 Query: 505 DSNTVKESI---------LQTGKLKLKEKEI 570 V+E+I L+ + K+ +K++ Sbjct: 1137 PDEKVEETIDNQSPWLLRLELDRAKMLDKQL 1167 [190][TOP] >UniRef100_UPI00006A2ADB UPI00006A2ADB related cluster n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A2ADB Length = 385 Score = 102 bits (253), Expect = 3e-20 Identities = 49/80 (61%), Positives = 62/80 (77%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM Sbjct: 103 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 162 Query: 256 NVTLGVPRIMEIINGASNIK 315 N+TLGVPRI EIIN + NI+ Sbjct: 163 NITLGVPRIKEIINASKNIR 182 [191][TOP] >UniRef100_Q8U0M5 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus furiosus RepID=RPOA2_PYRFU Length = 397 Score = 101 bits (252), Expect = 4e-20 Identities = 50/113 (44%), Positives = 74/113 (65%), Gaps = 2/113 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +++ ++E +D + Y +E G P+G + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 39 LTKAEIEAIIDDVVKEYERALVEPGEPVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARM--VKGRIEKTTLGQVAKS 420 G+PRI+EI++ N TP++T L+ + + A+ V RIE TTL +A+S Sbjct: 99 GLPRIIEIVDARKNPSTPMMTVYLDEEHRYDRAKAEEVARRIEGTTLENLARS 151 [192][TOP] >UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JYP8_SCHJY Length = 1748 Score = 101 bits (251), Expect = 5e-20 Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 11/160 (6%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 +R++ ++ G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N Sbjct: 1054 ARFQQCQVNPGEMVGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKN 1113 Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 IKTP +T L E N+++A+ V+ +IE TTL V + ++ I D + Sbjct: 1114 IKTPSLTIYLLPEIASNMDLAKNVQTQIEHTTLKTVTSATEIHYDPDPQNTVIDEDRDFV 1173 Query: 484 EEAYLNIDSNTVKESI---------LQTGKLKLKEKEIKI 576 EA+ I V+E++ L+ + K+ +K++ + Sbjct: 1174 -EAFFAIPDEEVEENLYKQSPWLLRLELDRAKMLDKKLSM 1212 [193][TOP] >UniRef100_Q4Y2E0 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4Y2E0_PLACH Length = 176 Score = 99.8 bits (247), Expect = 1e-19 Identities = 54/118 (45%), Positives = 80/118 (67%), Gaps = 1/118 (0%) Frame = +1 Query: 226 TFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLG 405 TFHFAGVASMNVTLGVPRI EIIN ++ I+TPI+ L DN N A M+K ++EKT++ Sbjct: 1 TFHFAGVASMNVTLGVPRIKEIINASNVIQTPILNIPLRIKDNYNFALMMKSKLEKTSIR 60 Query: 406 QVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL-QTGKLKLKEKEIKI 576 + + IK + + I +E++I++ +LNI++ T+++ IL QT K+K +I I Sbjct: 61 DICEYIKENYCPKGIFISIKFNEELIQKLFLNINAYTIRDVILKQTHISKIKINKIYI 118 [194][TOP] >UniRef100_C6A1G1 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A1G1_THESM Length = 397 Score = 99.8 bits (247), Expect = 1e-19 Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 2/147 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + + ++E +D + Y +E G +G + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 41 LKKAEIEAIIDEVVQEYEQALVEPGEAVGTVTAQSIGEPSTQMTLNTFHYAGVAEINVTL 100 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINI--ARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PRI+EI++ N TPI+T L+ + N A V RIE TTL +A+S+ + + Sbjct: 101 GLPRIIEIVDARKNPSTPIMTVHLDEEHRYNSEKALEVAKRIEGTTLESLARSMTLDILN 160 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVK 522 + +D + +E++ L ++ K Sbjct: 161 ME--FVVDIDPERLEKSGLTMEKIQAK 185 [195][TOP] >UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DXL0_ZYGRC Length = 1744 Score = 99.4 bits (246), Expect = 2e-19 Identities = 57/132 (43%), Positives = 78/132 (59%), Gaps = 2/132 (1%) Frame = +1 Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330 + G +G + A SIGEP TQMTL TFHFAGVAS VT GVPR+ EI+N A N+KTP +T Sbjct: 1058 VHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLT 1117 Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504 A LE D + A++++ IE TTL V + ++ + I DE+II+ + + Sbjct: 1118 AYLEPDYAADQEKAKLIRSVIEHTTLKSVTVASEIYYDPDPRSTAIPEDEEIIQLHFSLL 1177 Query: 505 DSNTVKESILQT 540 D T K Q+ Sbjct: 1178 DDETEKSLAQQS 1189 [196][TOP] >UniRef100_P11514 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus acidocaldarius RepID=RPOA2_SULAC Length = 393 Score = 99.4 bits (246), Expect = 2e-19 Identities = 61/194 (31%), Positives = 111/194 (57%), Gaps = 8/194 (4%) Frame = +1 Query: 10 KLTETITEDDPKHLKNLNNFIPRISGI--SRRQLEVFLDICLSRYRFKKIEAGTPIGAIG 183 +L E + K ++L I I+G+ + ++ +D+ + Y+ IE G IG + Sbjct: 13 RLNEIKDKIPDKLHEDLRAAIMDINGVELTEEDIDRIIDLTIREYQQSLIEPGEAIGVVT 72 Query: 184 AHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL------ET 345 A S+GEPGTQMTL+TFHFAG+ +NVTLG+PR++EI++ TP++T L + Sbjct: 73 AQSVGEPGTQMTLRTFHFAGIRELNVTLGLPRLIEIVDARKVPSTPMMTIYLTDEYKTDK 132 Query: 346 DDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKE 525 D ++IAR RIE T + V S+ V ++ S L D++++++ ++I+ Sbjct: 133 DKALDIAR----RIEYTRVENVVSSVSVDISNMSITL--QFDQEMLKDKGVSIEEIKKII 186 Query: 526 SILQTGKLKLKEKE 567 + L+ G++++++ + Sbjct: 187 TKLKLGEIRIEDND 200 [197][TOP] >UniRef100_P09847 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter thermautotrophicus str. Winter RepID=RPOA2_METTW Length = 449 Score = 99.4 bits (246), Expect = 2e-19 Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 2/163 (1%) Frame = +1 Query: 40 PKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMT 219 P+ ++ + I R G+S +L+ + Y +EAG +G + A S+GEPGTQMT Sbjct: 90 PRLIEEIAEAIKR-HGLSDDELDELVRGVRRAYERAMVEAGEAVGTVAAQSVGEPGTQMT 148 Query: 220 LKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEK 393 ++TFH+AGVA +NVTLG+PR++EI++ I TP ++ E D + R +I K Sbjct: 149 MRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPTMSIYFEGDRKYDEEFVRKKANKICK 208 Query: 394 TTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVK 522 +TL V K+ + S LDE+ I E +L D K Sbjct: 209 STLNDVLKNFSIQYADMSVE--AELDEEKIREKHLEYDDIIAK 249 [198][TOP] >UniRef100_O27126 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=RPOA2_METTH Length = 451 Score = 99.4 bits (246), Expect = 2e-19 Identities = 61/173 (35%), Positives = 90/173 (52%), Gaps = 2/173 (1%) Frame = +1 Query: 10 KLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAH 189 KL E I E KH +S +L+ + Y ++EAG +G + A Sbjct: 91 KLIEDIAEVMKKH------------ELSDDELDELIRRVRRAYDRARVEAGEAVGTVAAQ 138 Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN--I 363 S+GEPGTQMT++TFH+AGVA +NVTLG+PR++EI++ I TP ++ E D + Sbjct: 139 SVGEPGTQMTMRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPTMSIYFEGDLRYDEEF 198 Query: 364 ARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVK 522 R +I K+TL V K+ + S + LDE+ I+E +L D K Sbjct: 199 VRRKANKIGKSTLNDVLKNFSIQYADMS--VVAELDEEKIQEKHLEYDEILAK 249 [199][TOP] >UniRef100_B7Z6H4 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B7Z6H4_HUMAN Length = 1369 Score = 99.0 bits (245), Expect = 2e-19 Identities = 59/167 (35%), Positives = 93/167 (55%) Frame = +1 Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255 ++ I+ Q+E FL+ C +Y ++E G+ +GA+ M Sbjct: 1002 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGAL---------------------CTQM 1040 Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435 N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V Sbjct: 1041 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1100 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + + L + I L +++ TV+ SI T KL++K ++ + Sbjct: 1101 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1146 [200][TOP] >UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CBQ3_YARLI Length = 1750 Score = 99.0 bits (245), Expect = 2e-19 Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 11/151 (7%) Frame = +1 Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330 + G +G I A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A NIKTP +T Sbjct: 1062 VHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALT 1121 Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504 LE +I A++V+ IE T+L V + ++ I D + +AY +I Sbjct: 1122 VYLEPSVAADIEKAKVVQSAIEHTSLKNVTAATEIYYDPDPRTTVIEEDIDTV-DAYFSI 1180 Query: 505 DSNTVKESI---------LQTGKLKLKEKEI 570 TV+ ++ L+ + K+ +K++ Sbjct: 1181 PDETVEATLDNQSPWLLRLELDRAKMLDKQL 1211 [201][TOP] >UniRef100_P14247 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcus vannielii SB RepID=RPOA2_METVS Length = 386 Score = 99.0 bits (245), Expect = 2e-19 Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 2/141 (1%) Frame = +1 Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330 IE G +G I A SIGEPGTQMT++TFH+AGVA +NVTLG+PR++EI++ TP ++ Sbjct: 54 IEPGEAVGVIAAQSIGEPGTQMTMRTFHYAGVAELNVTLGLPRMIEIVDARKEPSTPTMS 113 Query: 331 AILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504 L D + A +V IE TT+ V++ I V + + I LD + +E L + Sbjct: 114 IYLRGDYKYDRESAAIVSKNIESTTVESVSEDISVDLVNE--CITIVLDVQQLESRQLTV 171 Query: 505 DSNTVKESILQTGKLKLKEKE 567 N V E+I KLK++E E Sbjct: 172 --NNVVEAIKSKMKLKIEENE 190 [202][TOP] >UniRef100_C7P942 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P942_METFA Length = 387 Score = 98.6 bits (244), Expect = 3e-19 Identities = 62/177 (35%), Positives = 103/177 (58%), Gaps = 3/177 (1%) Frame = +1 Query: 34 DDPKHLKN-LNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGT 210 D P+ LK+ L + + ++ +E ++ ++ YR +E +G + A SIGEPGT Sbjct: 14 DLPQSLKDELFEKLSKEKDLTDEMIEEIINEVVNAYRNAMVEPYEAVGIVAAQSIGEPGT 73 Query: 211 QMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILET--DDNINIARMVKGR 384 QMT++TFH+AGVA +NVTLG+PR++EI++ TPI+T L+ ++ A + Sbjct: 74 QMTMRTFHYAGVAEINVTLGLPRMIEIVDARKEPSTPIMTIYLKEGYKNDKEKAEKIAKE 133 Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKL 555 IE TL +A+SI + ++S + + LDE + + L ID V E+I + K+K+ Sbjct: 134 IESLTLENIAESISIDLWTQS--IKVELDENRLADRGLTIDD--VVEAIKKKVKVKI 186 [203][TOP] >UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO Length = 1752 Score = 98.6 bits (244), Expect = 3e-19 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 11/160 (6%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 +R++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N Sbjct: 1054 ARFQQAVVSPGEMVGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKN 1113 Query: 310 IKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 IKTP +T L N+++A+ V+ +IE TTL V + ++ I D+ + Sbjct: 1114 IKTPSLTIYLMPWIAANMDLAKNVQTQIEHTTLSTVTSATEIHYDPDPQDTVIEEDKDFV 1173 Query: 484 EEAYLNIDSNTVKESI---------LQTGKLKLKEKEIKI 576 EA+ I V+E++ L+ + K+ +K++ + Sbjct: 1174 -EAFFAIPDEEVEENLYKQSPWLLRLELDRAKMLDKKLSM 1212 [204][TOP] >UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis macrandra RepID=Q9C428_9FUNG Length = 1603 Score = 98.2 bits (243), Expect = 4e-19 Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 5/148 (3%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 SR++ K+ +G I A SIGEP TQMTL TFHFAGV S NVTLGVPR+ EIIN A+N Sbjct: 997 SRFKAAKVNPAEMVGTIAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKEIINVATN 1056 Query: 310 IKTPIITAILETDD-----NINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDE 474 ++TP + L+ + ++ A+ ++ +IE TTLG++A +V + D Sbjct: 1057 LRTPSLLVCLKANKDGRPLDLPQAKKIQAKIEYTTLGKLAVQSEVYYDPDLRNSVVEADR 1116 Query: 475 KIIEEAYLNIDSNTVKESILQTGKLKLK 558 + +AY I+ ++ L + L+++ Sbjct: 1117 DWL-DAYFEIEDADALQARLSSWALRIE 1143 [205][TOP] >UniRef100_Q12WS7 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WS7_METBU Length = 386 Score = 98.2 bits (243), Expect = 4e-19 Identities = 54/160 (33%), Positives = 96/160 (60%), Gaps = 2/160 (1%) Frame = +1 Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 G++++++E ++ ++ Y + +E +G + A SIGEPGTQMT++TFH+AGVA +NVT Sbjct: 33 GVTKKEMEEIIERVMADYNYACVEPCEAVGVVSAQSIGEPGTQMTMRTFHYAGVAEINVT 92 Query: 265 LGVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 LG+PR++EI++ TP++T L E + + AR V IE T + +A V Sbjct: 93 LGLPRLIEIVDARKTPSTPMMTVALAKEHAADRDFARKVAWEIEATHIEHLA---DVTTD 149 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558 + L + L+EK++ + +ID + + E + + K+ +K Sbjct: 150 LANMNLILDLNEKMLLQR--DIDVDAIAEKLAEGLKVNVK 187 [206][TOP] >UniRef100_Q2N151 RNA polymerase III large subunit (Fragment) n=1 Tax=Suberites fuscus RepID=Q2N151_9METZ Length = 269 Score = 97.4 bits (241), Expect = 7e-19 Identities = 57/111 (51%), Positives = 72/111 (64%) Frame = +1 Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423 VASMN+TLGVPRI EIIN + I TPIITA L+ D + AR+VKGRIEKT LG+VA+ I Sbjct: 1 VASMNITLGVPRIKEIINASKAISTPIITAHLKVDSDPEHARVVKGRIEKTLLGEVARYI 60 Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 + V + I LD I+ L ID+ TV+ +I KLK+K K + I Sbjct: 61 EEVYEPDGCYIKICLDSNRIKLLKLEIDTWTVQFAICSAPKLKIKPKHVSI 111 [207][TOP] >UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5E245_LACTC Length = 1740 Score = 97.4 bits (241), Expect = 7e-19 Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++++ E L S++ + G +G + A SIGEP TQMTL TFHFAGVAS VT Sbjct: 1037 LNKQTFEWVLSNVESQFLRSIVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTS 1096 Query: 268 GVPRIMEIINGASNIKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A N+KTP +T L+ D + A++++ IE TTL + + ++ Sbjct: 1097 GVPRLKEILNVAKNMKTPSLTVYLDKDHAADQEKAKLIRSAIEHTTLKSITVASEIYYDP 1156 Query: 442 RSAALFISLDEKIIEEAYLNIDSNT 516 + I DE+II+ + +D T Sbjct: 1157 DPRSTVIEEDEEIIQLHFSLMDEET 1181 [208][TOP] >UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FQS9_CANGA Length = 1715 Score = 97.1 bits (240), Expect = 9e-19 Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 2/126 (1%) Frame = +1 Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330 + G +G + A SIGEP TQMTL TFHFAGVAS VT GVPR+ EI+N A N+KTP +T Sbjct: 1058 VHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLT 1117 Query: 331 AILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504 LE + + + A++V+ IE TTL V + ++ + I D++II+ + + Sbjct: 1118 VYLEPEYSADQEKAKLVRSAIEHTTLKSVTVASEIYYDPDPRSTVIPEDDEIIQLHFSLL 1177 Query: 505 DSNTVK 522 D T K Sbjct: 1178 DDETEK 1183 [209][TOP] >UniRef100_C8SAT4 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAT4_FERPL Length = 376 Score = 97.1 bits (240), Expect = 9e-19 Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 9/169 (5%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + ++ + ++ C Y +E G G + A SIGEPGTQMT++TFH+AGVA +NVTL Sbjct: 28 VDKKTAKKVIEKCYEVYMKNLMEPGEAAGIVAAQSIGEPGTQMTMRTFHYAGVAEINVTL 87 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PR++EI++ N TP++T L E + AR V RIE TT+ VA + Sbjct: 88 GLPRLIEILDVRKNPSTPMMTIRLLPEYAKDREKAREVANRIEATTVNDVA---DIATDL 144 Query: 442 RSAALFISLDEKIIEEAYL-------NIDSNTVKESILQTGKLKLKEKE 567 R+ + ++ D K +E+ L I+ + +E + GK+ ++ KE Sbjct: 145 RNMRIIVTPDPKALEKKDLKFADVLKKIEKSVKEEVFEEDGKIIIQIKE 193 [210][TOP] >UniRef100_P58192 DNA-directed RNA polymerase subunit A'' n=2 Tax=Sulfolobus solfataricus RepID=RPOA2_SULSO Length = 392 Score = 97.1 bits (240), Expect = 9e-19 Identities = 56/168 (33%), Positives = 96/168 (57%), Gaps = 8/168 (4%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL Sbjct: 40 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 99 Query: 268 GVPRIMEIINGASNIKTPIITAIL------ETDDNINIARMVKGRIEKTTLGQVAKSIKV 429 G+PR++EI++ TP++T L + D + +AR ++E T + V S + Sbjct: 100 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKRDRDKALEVAR----KLEYTKIENVVSSTSI 155 Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567 S S + + LD +++++ + +D VK++I L+ G ++E E Sbjct: 156 DIASMS--IILQLDNEMLKDKGVTVDD--VKKAIGRLKLGDFMIEESE 199 [211][TOP] >UniRef100_Q5JE34 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus kodakarensis RepID=RPOA2_PYRKO Length = 391 Score = 97.1 bits (240), Expect = 9e-19 Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 2/162 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + + +++ +D + Y+ IE G +G + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 37 LKKDEIQAIIDETVREYQKALIEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI--NIARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PRI+EI++ N TPI+T L+ + + A V RIE TTL +A+ + + Sbjct: 97 GLPRIIEIVDARKNPSTPIMTVYLDEEHRYDRDKALEVARRIEGTTLENLAREETIDILN 156 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567 + +D + +E+A L+++ K TG K E E Sbjct: 157 ME--YVVEIDPERLEKAGLDMEKVVRK----LTGSFKSAEFE 192 [212][TOP] >UniRef100_O28390 DNA-directed RNA polymerase subunit A'' n=1 Tax=Archaeoglobus fulgidus RepID=RPOA2_ARCFU Length = 380 Score = 97.1 bits (240), Expect = 9e-19 Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 2/163 (1%) Frame = +1 Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 G+ + + + ++ C Y +E G G + A SIGEPGTQMT++TFH+AGVA +NVT Sbjct: 31 GLKKTEAKKVVEKCFQAYLANLMEPGEAAGIVAAQSIGEPGTQMTMRTFHYAGVAEINVT 90 Query: 265 LGVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438 LG+PR++EI++ N TP++T L E + AR V RIE T + VA + Sbjct: 91 LGLPRLIEILDVRKNPSTPMMTIRLLPEYAKDREKAREVANRIEATYVKDVA---DIEVD 147 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567 R + + DEK +E L ++ +K I + K +++E E Sbjct: 148 IRRFTIIVKPDEKALERKGLTVED--LKSKIGKALKTEVEETE 188 [213][TOP] >UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata RepID=Q9AXN0_9RHOD Length = 1746 Score = 96.7 bits (239), Expect = 1e-18 Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 +R+ K G IGA+ SIGEP TQMTL TFHFAGV++ NVTLGVPR+ EIIN A + Sbjct: 1069 NRFLHAKCPPGEMIGAVAPQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVAKH 1128 Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 KTP +T L E + A+ V+ ++ TTL V +S ++ I D++++ Sbjct: 1129 CKTPSLTVYLRGEAARDAERAKQVQAELQHTTLNHVTQSTEIYYDPNPQDTVIEADQELV 1188 Query: 484 EEAY 495 Y Sbjct: 1189 RSYY 1192 [214][TOP] >UniRef100_Q2N0X2 RNA polymerase III large subunit (Fragment) n=1 Tax=Monosiga brevicollis RepID=Q2N0X2_MONBE Length = 233 Score = 96.7 bits (239), Expect = 1e-18 Identities = 50/112 (44%), Positives = 70/112 (62%) Frame = +1 Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423 VA+MNVTLGVPRI EIIN A NI TP+ITA LE D + AR VK R+E TLG+VA Sbjct: 1 VAAMNVTLGVPRIKEIINAAKNISTPVITAKLENDREESFARQVKARLETLTLGEVADHF 60 Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579 VV + + L+ K+I+ +L + NT+ +SI + K+K + + ++ Sbjct: 61 DVVCNEDGGYVRVKLNLKVIQRKHLEVTMNTIIDSIAASRLTKIKHEHLSVM 112 [215][TOP] >UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii RepID=A1YIA7_ISSOR Length = 1647 Score = 96.7 bits (239), Expect = 1e-18 Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 11/153 (7%) Frame = +1 Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330 + G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N KTP +T Sbjct: 982 VNPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNFKTPALT 1041 Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504 LE + +I A+ ++ IE T+L V ++ I D + EAY I Sbjct: 1042 VYLEEEYATDIEKAKSIQSAIEHTSLKNVTACTEIYYDPDPRTTVIEEDFDTV-EAYFAI 1100 Query: 505 DSNTVKESI---------LQTGKLKLKEKEIKI 576 V+E++ L+ + K+ +K++ + Sbjct: 1101 PDEKVEENLHKQSPWLLRLELDRAKMLDKQLSM 1133 [216][TOP] >UniRef100_A2BN35 DNA-directed RNA polymerase subunit A'' n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=A2BN35_HYPBU Length = 424 Score = 96.7 bits (239), Expect = 1e-18 Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%) Frame = +1 Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 G++ + + + L Y + K+E G P+G + A SIGEPGTQMTL+TFH+AG+ NVT Sbjct: 49 GLTPEEAKKIIVNVLYEYEYSKVEPGEPVGTVAAQSIGEPGTQMTLRTFHYAGIREFNVT 108 Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNI--NIARMVKGRIEKTTLGQVAKSIKVVAT 438 LG+PR +E+++ TPI+ L+ + N A+ V RIE T + VA + + Sbjct: 109 LGLPRFIELVDARREPSTPIMHIYLDEEHRYDENKAKEVARRIEFTRVINVASEVDIDLV 168 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552 + + I LD ++E+ + ++ L+ GK++ Sbjct: 169 --NMRMVIKLDPVMLEDKGVTVEQVKKALERLKLGKVE 204 [217][TOP] >UniRef100_Q9V113 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus abyssi RepID=RPOA2_PYRAB Length = 397 Score = 96.7 bits (239), Expect = 1e-18 Identities = 51/142 (35%), Positives = 85/142 (59%), Gaps = 2/142 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +++ ++E +D + Y +E G +G + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 39 LTKAEVETIIDEVVKEYERALVEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PRI+EI++ N TP++T L+ + + A V RIE TTL +A++ + + Sbjct: 99 GLPRIIEIVDARKNPSTPMMTVYLDEEHRYDREKAEEVARRIEGTTLENLARTTTLDLIN 158 Query: 442 RSAALFISLDEKIIEEAYLNID 507 + +D + +E++ L ++ Sbjct: 159 ME--FIVEIDPERLEKSGLTME 178 [218][TOP] >UniRef100_P29158 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus celer RepID=RPOA2_THECE Length = 393 Score = 96.3 bits (238), Expect = 2e-18 Identities = 53/142 (37%), Positives = 85/142 (59%), Gaps = 2/142 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + + +++ +D + Y+ IE G IG + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 37 LKKAEVQAIIDETVKEYQKALIEPGEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PRI+EI++ N TPI+T L+ + + A V RIE T+L +A+ + Sbjct: 97 GLPRIIEIVDARKNPSTPIMTVYLDEEHRYDREKALEVARRIEGTSLENLARETTI--DI 154 Query: 442 RSAALFISLDEKIIEEAYLNID 507 + + +D + +E+A L+++ Sbjct: 155 LNFEFIVEIDPERLEKAGLDME 176 [219][TOP] >UniRef100_O93777 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus horikoshii RepID=RPOA2_PYRHO Length = 397 Score = 96.3 bits (238), Expect = 2e-18 Identities = 52/142 (36%), Positives = 85/142 (59%), Gaps = 2/142 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +++ ++E +D + Y IE G +G + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 39 LTKVEVETIIDEVIKEYEKALIEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PRI+EI++ N TP++T L+ + + A V RIE TTL +A++ + + Sbjct: 99 GLPRIIEIVDARKNPSTPMMTVYLDEEHRYDREKAEEVARRIEGTTLENLARTTTLDLIN 158 Query: 442 RSAALFISLDEKIIEEAYLNID 507 + +D + +E++ L ++ Sbjct: 159 ME--FIVEVDPERLEKSGLTME 178 [220][TOP] >UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium gossypii RepID=RPB1_ASHGO Length = 1745 Score = 96.3 bits (238), Expect = 2e-18 Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++++ E L+ +++ + G +G + A SIGEP TQMTL TFHFAGVAS VT Sbjct: 1037 LTKQTFEWVLNNIEAQFLRSIVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTS 1096 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A N+KTP +T LE + A++++ IE TTL V + ++ Sbjct: 1097 GVPRLKEILNVAKNMKTPSLTVYLEESYATDQEKAKLIRSAIEHTTLKSVPVASEIYYDP 1156 Query: 442 RSAALFISLDEKIIEEAYLNIDSNT 516 ++ I DE+II+ + +D T Sbjct: 1157 DPSSTVIEEDEEIIQLHFSLMDEET 1181 [221][TOP] >UniRef100_UPI0001A48A43 DNA-DIRECTED RNA POLYMERASE RPO1C SUBUNIT n=1 Tax=Sulfolobus shibatae RepID=UPI0001A48A43 Length = 395 Score = 95.9 bits (237), Expect = 2e-18 Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 4/164 (2%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL Sbjct: 43 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 102 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PR++EI++ TP++T L E + A V ++E T + V S + S Sbjct: 103 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKHDKEKALEVARKLEYTKIENVVSSTSIDIAS 162 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567 S + + LD +++++ + +D VK++I L+ G+ + E E Sbjct: 163 MS--IILQLDNEMLKDKGVTVDD--VKKAINRLKLGEFVIDESE 202 [222][TOP] >UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ02_THAPS Length = 1627 Score = 95.9 bits (237), Expect = 2e-18 Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 +R+ K+ G G + A SIGEP TQMTL TFH+AGV++ NVTLGVPR+ EIIN A Sbjct: 1070 ARFHHAKVSPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKT 1129 Query: 310 IKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 +KTP +T L+ + ++A++V IE T L + K ++ ++ D + + Sbjct: 1130 VKTPGLTIYLQNHVSGDADVAKLVHSMIEYTVLTDLTKLTEIYYDPDPVNTIVAKDREFV 1189 Query: 484 EEAY 495 +E Y Sbjct: 1190 KEYY 1193 [223][TOP] >UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TTU2_VANPO Length = 1311 Score = 95.9 bits (237), Expect = 2e-18 Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 2/126 (1%) Frame = +1 Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330 + G +G + A SIGEP TQMTL TFHFAGVAS VT GVPR+ EI+N A N+KTP T Sbjct: 740 VHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSST 799 Query: 331 AILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504 LE + I+ A+ ++ IE TTL V + ++ + I DE+II+ + + Sbjct: 800 VYLEPEYAIDQEKAKFIRSAIEHTTLKSVTVASEIYYDPDPRSTVIPDDEEIIQLHFSLL 859 Query: 505 DSNTVK 522 D T K Sbjct: 860 DDETEK 865 [224][TOP] >UniRef100_Q464Y8 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q464Y8_METBF Length = 426 Score = 95.9 bits (237), Expect = 2e-18 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 6/154 (3%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261 +G+S++++E ++ + YR IE G + A SIGEPGTQMT++TFH+AGVA +NV Sbjct: 32 AGVSKKEMEEIIEQVMEEYRSSCIEPCDAAGVVAAQSIGEPGTQMTMRTFHYAGVAEINV 91 Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIA------RMVKGRIEKTTLGQVAKSI 423 TLG+PR++EI++ TP++T L ++ + A R + IE T + +A Sbjct: 92 TLGLPRLIEIVDARKIPSTPMMTIALSKENPEDYAYDREKTRALAWEIEATKIDHIA--- 148 Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKE 525 V L I L EK +E + ID VKE Sbjct: 149 DVTTDLSQMKLIIDLHEKAMEGRNITIDQ--VKE 180 [225][TOP] >UniRef100_B8YB54 RNA polymerase subunit 1C n=1 Tax=Sulfolobus shibatae B12 RepID=B8YB54_SULSH Length = 395 Score = 95.9 bits (237), Expect = 2e-18 Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 4/164 (2%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL Sbjct: 43 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 102 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PR++EI++ TP++T L E + A V ++E T + V S + S Sbjct: 103 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKHDKEKALEVARKLEYTKIENVVSSTSIDIAS 162 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567 S + + LD +++++ + +D VK++I L+ G+ + E E Sbjct: 163 MS--IILQLDNEMLKDKGVTVDD--VKKAINRLKLGEFVIDESE 202 [226][TOP] >UniRef100_C3MZM9 DNA-directed RNA polymerase subunit A'' n=6 Tax=Sulfolobus islandicus RepID=RPOA2_SULIA Length = 392 Score = 95.9 bits (237), Expect = 2e-18 Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 4/164 (2%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL Sbjct: 40 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 99 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PR++EI++ TP++T L E + A V ++E T + V S + S Sbjct: 100 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKHDKEKALEVARKLEYTKIENVVSSTSIDIAS 159 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567 S + + LD +++++ + +D VK++I L+ G+ + E E Sbjct: 160 MS--IILQLDNEMLKDKGVTVDD--VKKAINRLKLGEFVIDESE 199 [227][TOP] >UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U396_PHYPA Length = 1742 Score = 95.5 bits (236), Expect = 3e-18 Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 2/150 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R E + +R+ + G IG + A SIGEP TQMTL TFHFAGV++ NVTL Sbjct: 1059 LTREAFEWVIGEVETRFLMSLVAPGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTL 1118 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDN--INIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EIIN A IKTP +T L+ N A+ V+ +E TTL V ++ ++ Sbjct: 1119 GVPRLREIINVAKKIKTPSLTVYLKPGVNKEKERAKNVQCALEYTTLRSVTQATEIWYDP 1178 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI 531 + I D + ++ Y D + E I Sbjct: 1179 EPMSTLIEEDMEFVKSYYEMPDEDVAPEKI 1208 [228][TOP] >UniRef100_B6YT17 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus onnurineus NA1 RepID=RPOA2_THEON Length = 391 Score = 95.5 bits (236), Expect = 3e-18 Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 2/140 (1%) Frame = +1 Query: 94 RRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGV 273 + ++E ++ + Y+ +E G IG + A SIGEP TQMTL TFH+AGVA +NVTLG+ Sbjct: 39 KAEVEAIIEETVKEYQNSLVEPGEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGL 98 Query: 274 PRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRS 447 PRI+EI++ N TPI+T L+ + A V RIE TTL +A+ + + + Sbjct: 99 PRIIEIVDARKNPSTPIMTVYLDEKHRYDREKALEVARRIEGTTLENLAREMSI--DILN 156 Query: 448 AALFISLDEKIIEEAYLNID 507 + +D + +E++ L+++ Sbjct: 157 FEFIVEIDPERLEKSGLDME 176 [229][TOP] >UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H9U6_PENCW Length = 1733 Score = 95.1 bits (235), Expect = 3e-18 Identities = 54/131 (41%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 SR+ G +G + A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ EI+N A+N Sbjct: 1067 SRFARAAANPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATN 1126 Query: 310 IKTPIITAILE---TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKI 480 IKTP +T E T D A++++ +E T+L V +S ++ + I D + Sbjct: 1127 IKTPSMTVYQEGVKTHDKEG-AKLLRSLVEHTSLRSVTESTEIYYDPDIQSTVIENDRDM 1185 Query: 481 IEEAYLNIDSN 513 +E ++ + N Sbjct: 1186 VESYFIIPEDN 1196 [230][TOP] >UniRef100_B5IW00 Putative uncharacterized protein (Fragment) n=1 Tax=Thermococcus barophilus MP RepID=B5IW00_9EURY Length = 169 Score = 95.1 bits (235), Expect = 3e-18 Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 2/114 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 + ++++E ++ + Y +E G IG + A SIGEP TQMTL TFH+AGVA +NVTL Sbjct: 39 LKKKEVEAIIEEVVKEYENAVVEPGEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98 Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSI 423 G+PRI+EI++ N TPI+T L+ + + A V +IE TTL +A+S+ Sbjct: 99 GLPRIIEIVDARKNPSTPIMTVYLDEEHRYDREKALEVARKIEGTTLINLAQSM 152 [231][TOP] >UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR Length = 1748 Score = 94.4 bits (233), Expect = 6e-18 Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 SR+ AG +G + A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ EI+N A+N Sbjct: 1071 SRFAKANAPAGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATN 1130 Query: 310 IKTPIITAILE---TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKI 480 IKTP +T E T D A+ ++ +E T+L V ++ ++ + I D + Sbjct: 1131 IKTPSMTVYQEPGRTHDKEG-AKQLRSVVEHTSLRSVTEATEIYYDPDIQSTVIENDRDM 1189 Query: 481 IEEAYLNIDSNTVKESILQT 540 + E+Y I + +S Q+ Sbjct: 1190 V-ESYFIIPEDVTDDSSRQS 1208 [232][TOP] >UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CL79_KLULA Length = 1720 Score = 94.4 bits (233), Expect = 6e-18 Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 2/147 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++R+ + L+ +++ + G +G + A SIGEP TQMTL TFHFAGVAS VT Sbjct: 1037 LNRQTFDWVLNNIEAQFLRSIVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTS 1096 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ EI+N A N+KTP +T L+ + + A+ ++ IE TTL V + ++ Sbjct: 1097 GVPRLKEILNVAKNMKTPSLTVYLDPEYAADQEKAKEIRSAIEHTTLKSVTVASEIYYDP 1156 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVK 522 + I DE+II+ + +D T K Sbjct: 1157 DPRSTVIEDDEEIIQLHFSLMDEETEK 1183 [233][TOP] >UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0D054_ASPTN Length = 1742 Score = 94.4 bits (233), Expect = 6e-18 Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 4/138 (2%) Frame = +1 Query: 139 RFKKIEA--GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNI 312 RF K A G +G + A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ EI+N A+NI Sbjct: 1073 RFAKAAASPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATNI 1132 Query: 313 KTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIE 486 KTP +T E T + A+ ++ +E T+L V ++ ++ I D ++ Sbjct: 1133 KTPSMTVYQEPYTCHDKESAKQLRSAVEHTSLRSVTEATEIYYDPDIQTTVIENDRDMV- 1191 Query: 487 EAYLNIDSNTVKESILQT 540 E+Y I + +S Q+ Sbjct: 1192 ESYFIIPEDVTDDSTRQS 1209 [234][TOP] >UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MI48_9CHLO Length = 1694 Score = 94.0 bits (232), Expect = 8e-18 Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 2/124 (1%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 SR++ G IG + A SIGEP TQMTL TFHFAGV++ NVTLGVPR+ EIIN A Sbjct: 1055 SRFKMALAPPGDGIGTVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINIAKK 1114 Query: 310 IKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 IKTP +T L D + +A+ V+ +E TTL VA ++ I D++ + Sbjct: 1115 IKTPSLTVALRKDLAGDRAMAKNVQASLEYTTLHSVAAVSEIYYDPDPTDTVIEEDKEFV 1174 Query: 484 EEAY 495 Y Sbjct: 1175 RAYY 1178 [235][TOP] >UniRef100_B8D6G8 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6G8_DESK1 Length = 406 Score = 94.0 bits (232), Expect = 8e-18 Identities = 59/193 (30%), Positives = 104/193 (53%), Gaps = 3/193 (1%) Frame = +1 Query: 10 KLTETITEDDPKHLKN-LNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGA 186 +L E +++ + ++N L N +I I+R +E F++ + RY IE G +G I A Sbjct: 16 RLKENVSQQVYEEVRNKLLNIAGKIV-ITRETVERFIEHIIERYHSSLIEPGEAVGTIAA 74 Query: 187 HSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL--ETDDNIN 360 S+GEP TQMTL+ FH+AGV NVTLG+PR++EI++ +TPI+ L E + Sbjct: 75 QSLGEPSTQMTLRVFHYAGVREYNVTLGLPRLIEIVDARKKPETPIMEIYLVDEYRRSEE 134 Query: 361 IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQT 540 AR + +IE T L + + + + + LD +++E+ L+++ K L Sbjct: 135 KAREIARKIESTYLENITRELDIDLI--EGVTRVRLDPEMLEDKGLSVEVIIKKLKELDV 192 Query: 541 GKLKLKEKEIKIL 579 G++ + +++ Sbjct: 193 GEVSRGDDPYEVI 205 [236][TOP] >UniRef100_A3DMP5 DNA-directed RNA polymerase, subunit A' n=1 Tax=Staphylothermus marinus F1 RepID=A3DMP5_STAMF Length = 421 Score = 94.0 bits (232), Expect = 8e-18 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 2/157 (1%) Frame = +1 Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264 G+ +++ + + RY + E G P+G + A SIGEP TQMTL+TFH+AGV NVT Sbjct: 43 GLYIEEVKAIIKETIDRYMRSQAEPGEPVGTVAAQSIGEPSTQMTLRTFHYAGVREFNVT 102 Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVAT 438 LG+PR++EI++ TPI+ L+ + + A+ V IE TT+ ++K I V Sbjct: 103 LGLPRLIEIVDARKKPGTPIMEIPLDEEHKYDEEKAKKVARMIESTTIENISKEINVDPY 162 Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549 + I LD +++ + +++D L+ GK+ Sbjct: 163 EGAT---IVLDSEMLSDKGISVDEVVKVLEKLKLGKV 196 [237][TOP] >UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium discoideum RepID=RPB1_DICDI Length = 1727 Score = 94.0 bits (232), Expect = 8e-18 Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 5/135 (3%) Frame = +1 Query: 106 EVFLDIC---LSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVP 276 + FL +C S++ G +GA+ A SIGEP TQMTL TFH+AGV+S NVTLGVP Sbjct: 1059 KAFLWVCGEIESKFLQALAHPGEMVGALAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVP 1118 Query: 277 RIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSA 450 R+ EIIN A +KTP +T L+ +++ A++VK ++E TTL V + ++ Sbjct: 1119 RLKEIINIAKQVKTPSLTIYLKPHMARDMDRAKIVKSQLEYTTLANVTSATEIYYDPDPQ 1178 Query: 451 ALFISLDEKIIEEAY 495 IS D + + + Sbjct: 1179 NTIISEDAEFVNSYF 1193 [238][TOP] >UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=O77375_PLAF7 Length = 2457 Score = 93.6 bits (231), Expect = 1e-17 Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 8/145 (5%) Frame = +1 Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339 G +GA+ A SIGEP TQMTL TFHFAGV S NVTLGVPR+ E+IN N+KTP T L Sbjct: 1399 GECVGALAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKELINIVKNVKTPSTTIYL 1458 Query: 340 E--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513 + ++ A+ + ++E TTL Q+ +++ + + D+ + E Y D + Sbjct: 1459 DDMVSNDQQKAKDILTKLEYTTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDED 1518 Query: 514 TVKESI------LQTGKLKLKEKEI 570 + S+ +Q + + EK++ Sbjct: 1519 DTQYSLGEWVLRIQLTNIHVNEKKL 1543 [239][TOP] >UniRef100_A1RWW4 DNA-directed RNA polymerase, subunit A' n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RWW4_THEPD Length = 403 Score = 93.6 bits (231), Expect = 1e-17 Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 2/167 (1%) Frame = +1 Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261 +G+SR + ++ L RY + G +G + A SIGEP TQMTL+TFHFAGV +NV Sbjct: 36 AGLSRSEALSVINEALRRYLSSLVSPGEAVGMVAAQSIGEPATQMTLRTFHFAGVRELNV 95 Query: 262 TLGVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVA 435 TLG+PR++EI++ TPI+ LE + +++ A + IE TT+ + SI + Sbjct: 96 TLGLPRLIEIVDLRREPSTPIMEVYLEPEHAKDLDFALKIAREIELTTMENLCSSITI-- 153 Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576 A+ + LD ++E + +D + I KLK K+ +I++ Sbjct: 154 DYFEFAIVMELDPDMMENRGVTMD-----DVINALEKLKGKKGKIEV 195 [240][TOP] >UniRef100_A8TEB9 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanococcus voltae A3 RepID=A8TEB9_METVO Length = 387 Score = 93.6 bits (231), Expect = 1e-17 Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 2/172 (1%) Frame = +1 Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231 +NL N I + + S ++ ++ Y +E G +G + A SIGEPGTQMT++TF Sbjct: 21 QNLLNKILKENIESEEMIDEIVNETQIAYERTLVEPGEAVGVVAAQSIGEPGTQMTMRTF 80 Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLG 405 H+AGVA +NVTLG+PR++EI++ TP +T L D + A+ V IE TT+ Sbjct: 81 HYAGVAELNVTLGLPRMIEIVDARKEPSTPTMTINLLEDYKYDREKAQQVAKNIESTTVE 140 Query: 406 QVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKE 561 VA +I V ++ ++ ++ +E+ L+++ V SI KLK+ + Sbjct: 141 SVADNISVNLVEECISIILNAEK--LEKRNLSVED--VVNSIKSKMKLKIDQ 188 [241][TOP] >UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium falciparum CDC/Honduras RepID=RPB1_PLAFD Length = 2452 Score = 93.6 bits (231), Expect = 1e-17 Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 8/145 (5%) Frame = +1 Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339 G +GA+ A SIGEP TQMTL TFHFAGV S NVTLGVPR+ E+IN N+KTP T L Sbjct: 1402 GECVGALAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKELINIVKNVKTPSTTIYL 1461 Query: 340 E--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513 + ++ A+ + ++E TTL Q+ +++ + + D+ + E Y D + Sbjct: 1462 DDMVSNDQQKAKDILTKLEYTTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDED 1521 Query: 514 TVKESI------LQTGKLKLKEKEI 570 + S+ +Q + + EK++ Sbjct: 1522 DTQYSLGEWVLRIQLTNIHVNEKKL 1546 [242][TOP] >UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1EA31_9CHLO Length = 1720 Score = 93.2 bits (230), Expect = 1e-17 Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 SR++ G IG + A SIGEP TQMTL TFHFAGV++ NVTLGVPR+ E+IN A Sbjct: 1053 SRFKVALAPPGDGIGTVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKELINIAKK 1112 Query: 310 IKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 IKTP +T L D + +A+ V+ +E TTL VA + +V I D++ + Sbjct: 1113 IKTPSLTVALRKDLAGDRAMAKNVQSILEYTTLHSVAAASEVWYDPDPTDTVIEEDKEFV 1172 Query: 484 EEAY 495 Y Sbjct: 1173 RSYY 1176 [243][TOP] >UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IRZ2_CHLRE Length = 1789 Score = 93.2 bits (230), Expect = 1e-17 Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 6/142 (4%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ + L+ L +R+ + AG +G + A S+GEP TQMTL TFHFAGV++ NVTL Sbjct: 1053 LNNKALDWLLGELETRFFLAQAHAGECVGTVAAQSLGEPTTQMTLNTFHFAGVSAKNVTL 1112 Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKV---- 429 GVPR+ E+IN A NIKTP +T L +N + A+ ++ ++E T V K+ ++ Sbjct: 1113 GVPRLTELINLAKNIKTPTLTVHLLPGLRENKDAAKEIQSKLEYTCFKNVVKTTEIWYDP 1172 Query: 430 VATSRSAALFISLDEKIIEEAY 495 V + + I DE+++ Y Sbjct: 1173 VDPANANQTVIGEDEEMLSSYY 1194 [244][TOP] >UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3L428_PLAKH Length = 2353 Score = 93.2 bits (230), Expect = 1e-17 Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 8/145 (5%) Frame = +1 Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339 G +GA+ A SIGEP TQMTL TFHFAGV S NVTLGVPR+ E+IN N+KTP T L Sbjct: 1320 GECVGALAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKELINIVKNVKTPSTTIYL 1379 Query: 340 E--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513 + ++ A+ + ++E TTL Q+ +++ + + + D+ ++E Y D + Sbjct: 1380 DDIVSNDQQKAKDILTKLEYTTLKQLTSHAQIIYDPNTTSTILEEDKTWVDEFYEFPDED 1439 Query: 514 TVKESI------LQTGKLKLKEKEI 570 + ++ +Q + + EK++ Sbjct: 1440 DTQYTLGEWVLRIQLTNIHVNEKKL 1464 [245][TOP] >UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4P7Q0_USTMA Length = 1774 Score = 93.2 bits (230), Expect = 1e-17 Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 2/126 (1%) Frame = +1 Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339 G G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EIIN A NIKTP +T L Sbjct: 1073 GEMCGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINCAENIKTPSVTVYL 1132 Query: 340 --ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513 + + A++++ + TTL V +++V +A I D+ + EA+ I Sbjct: 1133 TEQYSQSQESAKVIQTALAHTTLQTVTSAVEVHYDPDPSATVIEEDKDFV-EAFFAIPDE 1191 Query: 514 TVKESI 531 V+ S+ Sbjct: 1192 EVEASL 1197 [246][TOP] >UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W4S0_PYRTR Length = 1742 Score = 93.2 bits (230), Expect = 1e-17 Identities = 52/148 (35%), Positives = 86/148 (58%), Gaps = 1/148 (0%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +++ L+ L R+ + G +G + A SIGEP TQMTL TFHFAGV+S NVTL Sbjct: 1051 LNKEALKYILGELEDRFLKAAVAPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTL 1110 Query: 268 GVPRIMEIINGASNIKTP-IITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444 GVPR+ EI+N A+NIKTP ++ + + A+ ++ IE TTL + +++++ Sbjct: 1111 GVPRLKEILNVAANIKTPSMLVRQINKKADQGDAKKLRSTIELTTLRSLTQAVELYYDPD 1170 Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKES 528 + + D+ ++E ++ + + V ES Sbjct: 1171 IQSTRVEDDQDMVESYFILPEEDEVIES 1198 [247][TOP] >UniRef100_A3CS85 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CS85_METMJ Length = 390 Score = 93.2 bits (230), Expect = 1e-17 Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 2/161 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 ++ + E L++ S Y+ +IE +G + A SIGEPGTQMT++TFH+AGVA +NVTL Sbjct: 31 VTEEEFEQILEMVFSEYQKSRIEPCEAVGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTL 90 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 G+PR++EI++ TP + L D N + AR V +IE L + + Sbjct: 91 GLPRLIEIMDARREPSTPTMAVHLLDDWAFNRDRAREVSWQIEAAPLHEFG---DITIDM 147 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564 + + + L++ + + ++ID IL+ G K++EK Sbjct: 148 ENMQVLVMLNKAVCDRRKISID------EILEAGPRKMREK 182 [248][TOP] >UniRef100_Q8PUR2 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanosarcina mazei RepID=RPOA2_METMA Length = 408 Score = 93.2 bits (230), Expect = 1e-17 Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 6/159 (3%) Frame = +1 Query: 49 LKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKT 228 LK L + + + +G+S++++E ++ + Y IE G + A SIGEPGTQMT++T Sbjct: 23 LKTLRDDVIK-AGVSKKEMEEIIERVMEEYTVSCIEPCDAAGVVAAQSIGEPGTQMTMRT 81 Query: 229 FHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIA------RMVKGRIE 390 FH+AGVA +NVTLG+PR++EI++ TP++T L + + A R + IE Sbjct: 82 FHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKEHPEDYAYDREKTRALAWEIE 141 Query: 391 KTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNID 507 T + +A V L I L EK +E + ID Sbjct: 142 ATKIDHIA---DVTTDLSQMKLIIDLHEKAMEGRNITID 177 [249][TOP] >UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351 Length = 2085 Score = 92.8 bits (229), Expect = 2e-17 Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 2/124 (1%) Frame = +1 Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309 SR+ + G IG + A SIGEP TQMTL TFH+AGV++ NVTLGVPR+ EIIN A N Sbjct: 1071 SRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKN 1130 Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483 IKTP ++ L E + +A+ V+ +E TTL V + ++ I D + + Sbjct: 1131 IKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFV 1190 Query: 484 EEAY 495 + Y Sbjct: 1191 QSYY 1194 [250][TOP] >UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=Q99368_SOYBN Length = 977 Score = 92.8 bits (229), Expect = 2e-17 Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 2/150 (1%) Frame = +1 Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267 +SR E + SR+ + G IG + A SIGEP TQMTL TFHFAGV++ NVTL Sbjct: 248 LSRESFEWVVGEIESRFLQSLVVPGEMIGVVAAQSIGEPATQMTLNTFHFAGVSAKNVTL 307 Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441 GVPR+ E+IN A +IKTP ++ L+ D A+ V+ +E TTL V ++ +V Sbjct: 308 GVPRLRELINVAKSIKTPSLSVYLKPDAGKTKERAKTVQCALEYTTLRSVTQATEVWYDP 367 Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI 531 + I D + Y D E I Sbjct: 368 DPMSTIIEEDVDFVMSYYEMPDEEVALEKI 397