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[1][TOP]
>UniRef100_UPI00019836CE PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019836CE
Length = 1383
Score = 234 bits (598), Expect = 3e-60
Identities = 119/171 (69%), Positives = 144/171 (84%)
Frame = +1
Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246
F ISGI+ +QL+VFLD C+SRY+ K+IEAGT IGAIGAHSIGEPGTQMTLKTFHFAGV
Sbjct: 1004 FAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 1063
Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426
ASMNVTLGVPRI EIINGA I TPIITA LE ++N+ ARMVKGRIE+TTLGQVAKSIK
Sbjct: 1064 ASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIK 1123
Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+V TSR A + ++LD + I+ + L+IDSN V+ESIL+ ++KLK++ IK+L
Sbjct: 1124 IVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVL 1174
[2][TOP]
>UniRef100_A7NZA4 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NZA4_VITVI
Length = 1370
Score = 234 bits (598), Expect = 3e-60
Identities = 119/171 (69%), Positives = 144/171 (84%)
Frame = +1
Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246
F ISGI+ +QL+VFLD C+SRY+ K+IEAGT IGAIGAHSIGEPGTQMTLKTFHFAGV
Sbjct: 1004 FAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGV 1063
Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426
ASMNVTLGVPRI EIINGA I TPIITA LE ++N+ ARMVKGRIE+TTLGQVAKSIK
Sbjct: 1064 ASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIK 1123
Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+V TSR A + ++LD + I+ + L+IDSN V+ESIL+ ++KLK++ IK+L
Sbjct: 1124 IVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVL 1174
[3][TOP]
>UniRef100_B9GIK9 DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa
RepID=B9GIK9_POPTR
Length = 1394
Score = 223 bits (567), Expect = 1e-56
Identities = 118/193 (61%), Positives = 144/193 (74%)
Frame = +1
Query: 1 ENTKLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAI 180
EN K E +T KN ++SGI+ +QLEVFL CL RY +K+IE GT IGAI
Sbjct: 1004 ENIKNVEGLTGIS----KNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAI 1059
Query: 181 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN 360
GA SIGEPGTQMTLKTFHFAGVASMN+T GVPRI EIINGA I TPIIT LE + N+N
Sbjct: 1060 GAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVN 1119
Query: 361 IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQT 540
AR++KGRI+KT LGQVAKSIK+V TSRSA++ ++LD K I EA L++D+N V+E IL+T
Sbjct: 1120 AARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILET 1179
Query: 541 GKLKLKEKEIKIL 579
K+K K + I +L
Sbjct: 1180 PKIKRKLQRINVL 1192
[4][TOP]
>UniRef100_B9T0Q9 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9T0Q9_RICCO
Length = 1383
Score = 221 bits (562), Expect = 4e-56
Identities = 111/176 (63%), Positives = 140/176 (79%)
Frame = +1
Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231
K + +I G+S RQ+EVF+ C++RY +K++E GT IGAIGA SIGEPGTQMTLKTF
Sbjct: 990 KIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTF 1049
Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQV 411
HFAGVASMN+T GVPRI EIINGA I TPIITA LE + N+ AR+ KGRI+KT LGQV
Sbjct: 1050 HFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKGRIQKTVLGQV 1109
Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
AKSIK+V TSRSA++ I+LD K I+ A L++D+N VKE+IL+T ++KLK + IK+L
Sbjct: 1110 AKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVL 1165
[5][TOP]
>UniRef100_UPI0001505876 NRPC1; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
binding / zinc ion binding n=1 Tax=Arabidopsis thaliana
RepID=UPI0001505876
Length = 1376
Score = 207 bits (526), Expect = 6e-52
Identities = 109/168 (64%), Positives = 134/168 (79%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
+ SG++ +QLEVF+ IC+ RYR KKIEAGT IG IGA SIGEPGTQMTLKTFHFAGVASM
Sbjct: 993 KASGVTDKQLEVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASM 1052
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+T GVPRI EIIN + NI TP+I+A LE + AR VKGRIEKTTLGQVA+SI+V+
Sbjct: 1053 NITQGVPRINEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLM 1112
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
TS SA++ I LD KIIEEA L+I +VK SIL+T ++KL + +I++L
Sbjct: 1113 TSTSASVRIILDNKIIEEACLSITPWSVKNSILKTPRIKLNDNDIRVL 1160
[6][TOP]
>UniRef100_Q9LVH0 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
RepID=Q9LVH0_ARATH
Length = 1383
Score = 197 bits (501), Expect = 5e-49
Identities = 104/159 (65%), Positives = 127/159 (79%)
Frame = +1
Query: 103 LEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI 282
++VF+ IC+ RYR KKIEAGT IG IGA SIGEPGTQMTLKTFHFAGVASMN+T GVPRI
Sbjct: 1009 MQVFVKICVFRYREKKIEAGTAIGTIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRI 1068
Query: 283 MEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFI 462
EIIN + NI TP+I+A LE + AR VKGRIEKTTLGQVA+SI+V+ TS SA++ I
Sbjct: 1069 NEIINASKNISTPVISAELENPLELTSARWVKGRIEKTTLGQVAESIEVLMTSTSASVRI 1128
Query: 463 SLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
LD KIIEEA L+I +VK SIL+T ++KL + +I++L
Sbjct: 1129 ILDNKIIEEACLSITPWSVKNSILKTPRIKLNDNDIRVL 1167
[7][TOP]
>UniRef100_A9RSV5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RSV5_PHYPA
Length = 1397
Score = 197 bits (501), Expect = 5e-49
Identities = 103/172 (59%), Positives = 130/172 (75%), Gaps = 5/172 (2%)
Frame = +1
Query: 79 ISGISRRQLE-----VFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243
ISG++ RQLE VFLD C+ RY K++E G +GA+GA SIGEPGTQMTLKTFHFAG
Sbjct: 1017 ISGLTSRQLEICLLQVFLDTCIKRYHMKRVEPGAAVGAVGAQSIGEPGTQMTLKTFHFAG 1076
Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423
VASMN+TLGVPRI EIIN + NI TPIITA+L + ++ AR+VKGRIEKTTLG+VAKSI
Sbjct: 1077 VASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKSI 1136
Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
K V + A + + LD K I+ L+I+S+TV +I+QT K+KLK I+I+
Sbjct: 1137 KTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLKHVNIRIV 1188
[8][TOP]
>UniRef100_B9FFW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FFW1_ORYSJ
Length = 1321
Score = 194 bits (492), Expect = 5e-48
Identities = 102/179 (56%), Positives = 130/179 (72%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
+H + ISGIS +QL+VFLD CLSRY KKIEAG IGAIGA SIGEPGTQMTL
Sbjct: 930 RHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTL 989
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMNVTLGVPRI EIIN A I TPIITA L ++ ++ AR+VKG +EK L
Sbjct: 990 KTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVL 1049
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
G+VA++IK+V S L + LD + IE ++ I +++V+ SIL K+KLK + ++++
Sbjct: 1050 GEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVI 1108
[9][TOP]
>UniRef100_Q7X881 DNA-directed RNA polymerase n=3 Tax=Oryza sativa RepID=Q7X881_ORYSJ
Length = 1383
Score = 194 bits (492), Expect = 5e-48
Identities = 102/179 (56%), Positives = 130/179 (72%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
+H + ISGIS +QL+VFLD CLSRY KKIEAG IGAIGA SIGEPGTQMTL
Sbjct: 992 RHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTL 1051
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMNVTLGVPRI EIIN A I TPIITA L ++ ++ AR+VKG +EK L
Sbjct: 1052 KTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVL 1111
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
G+VA++IK+V S L + LD + IE ++ I +++V+ SIL K+KLK + ++++
Sbjct: 1112 GEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVI 1170
[10][TOP]
>UniRef100_C5YBD9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YBD9_SORBI
Length = 1391
Score = 192 bits (488), Expect = 2e-47
Identities = 100/167 (59%), Positives = 127/167 (76%)
Frame = +1
Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
ISGIS +QL+VFLD CLSRY+ KKIEAG IGAIGA SIGEPGTQMTLKTFHFAGVASMN
Sbjct: 1011 ISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 1070
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
VTLGVPRI EIIN A I TPIITA L + ++ AR+VKG +EK LG+VA +I++V
Sbjct: 1071 VTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLK 1130
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
S L + LD ++IE ++ I +++V+ SIL K+KLK + ++++
Sbjct: 1131 SSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVI 1177
[11][TOP]
>UniRef100_Q86AQ5 DNA-directed RNA polymerase III subunit rpc1 n=1 Tax=Dictyostelium
discoideum RepID=RPC1_DICDI
Length = 1450
Score = 188 bits (478), Expect = 2e-46
Identities = 104/186 (55%), Positives = 126/186 (67%), Gaps = 6/186 (3%)
Frame = +1
Query: 31 EDDPKHLKNLN------NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHS 192
E + K LK L + + +I I++ Q+E+FLDICL +Y +IE GT +GAIGA S
Sbjct: 1051 EKESKRLKLLGERFANEHVVNQIHRITKTQIELFLDICLDKYSRARIEPGTAVGAIGAQS 1110
Query: 193 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARM 372
IGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN A NI TPIITA L D +I AR+
Sbjct: 1111 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKNISTPIITASLNCDYDIRSARI 1170
Query: 373 VKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
V GRIEKTTLG VA IK V L I +D+ ++ L I+S T+ +SI T LK
Sbjct: 1171 VAGRIEKTTLGHVATHIKEVVKRAGCYLSIKIDKNFVDSLQLEINSKTISQSIASTKGLK 1230
Query: 553 LKEKEI 570
LK ++I
Sbjct: 1231 LKPEQI 1236
[12][TOP]
>UniRef100_C1E5P6 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1E5P6_9CHLO
Length = 1479
Score = 184 bits (468), Expect = 3e-45
Identities = 92/162 (56%), Positives = 118/162 (72%)
Frame = +1
Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
G+++ QL+ FL+ C+ +Y K+IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVT
Sbjct: 1014 GVTKAQLDEFLERCVRKYSAKRIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVT 1073
Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444
LGVPRI EIIN A NI TPIITA LE DDN+ AR+VKGR+EKTTLG+V K I VV
Sbjct: 1074 LGVPRIKEIINAAKNISTPIITATLECDDNVKAARVVKGRVEKTTLGEVCKFIDVVYNPS 1133
Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570
+ + + LD +I L++ +V+ S++ KLKLK +
Sbjct: 1134 ACYVEVCLDPAVISALQLDVTVESVRHSLITAPKLKLKANTV 1175
[13][TOP]
>UniRef100_C1MN08 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MN08_9CHLO
Length = 1591
Score = 182 bits (462), Expect = 2e-44
Identities = 92/162 (56%), Positives = 117/162 (72%)
Frame = +1
Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
G++ QL+ FL C+ +Y K+IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMN+T
Sbjct: 1163 GVTAAQLDEFLARCVQKYDAKRIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNIT 1222
Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444
LGVPRI EIIN + NI TPIITA L DD++ AR+VKGR+EKTTLG+V K I VV
Sbjct: 1223 LGVPRIKEIINASKNISTPIITATLACDDDVKAARVVKGRVEKTTLGEVCKHIHVVFDPT 1282
Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570
+ L ++LD +I L++ TVK ++L T KLKLK +
Sbjct: 1283 ACYLEVALDPDVIRALQLDVTVATVKRALLSTTKLKLKPNRV 1324
[14][TOP]
>UniRef100_Q01DV6 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
RepID=Q01DV6_OSTTA
Length = 1406
Score = 177 bits (448), Expect = 7e-43
Identities = 87/163 (53%), Positives = 116/163 (71%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
IS QL FLD+C+ +Y K+IE GT +GA+GA SIGEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1014 ISESQLNTFLDVCMQKYNAKRIEPGTAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITL 1073
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + +I TPII+A L +D ++ AR+VKGR+EKTTLG++ +V S
Sbjct: 1074 GVPRIKEIINASKSISTPIISASLMSDRDVKAARVVKGRVEKTTLGEICSDAGIVVRSHE 1133
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
L + LD + I + L++ +T + ++L KLKLK + + I
Sbjct: 1134 VYLELVLDLEAINQLQLDVTIHTARTAVLAAPKLKLKPQHVLI 1176
[15][TOP]
>UniRef100_A4RTE2 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RTE2_OSTLU
Length = 1395
Score = 177 bits (448), Expect = 7e-43
Identities = 89/163 (54%), Positives = 117/163 (71%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S RQ++ FLD C +Y K+IE GT +GAIGA SIGEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 1015 MSDRQMKAFLDACARKYTEKRIEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNITL 1074
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + NI TPIITA L +D ++ AR+VKGR+EKTTLG++ I +V
Sbjct: 1075 GVPRIKEIINASKNISTPIITASLMSDRDVKAARVVKGRVEKTTLGEICSEINIVVRPHD 1134
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
L + LD + I + L++ ++V+ ++L KLKLK + + I
Sbjct: 1135 LYLELMLDMEAINQLQLDVTIHSVRLAVLGAPKLKLKPQHVLI 1177
[16][TOP]
>UniRef100_Q45NI8 RNA polymerase III largest subunit n=1 Tax=Medicago sativa
RepID=Q45NI8_MEDSA
Length = 147
Score = 174 bits (442), Expect = 3e-42
Identities = 89/104 (85%), Positives = 96/104 (92%)
Frame = +1
Query: 1 ENTKLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAI 180
+NT LT++I EDD +LKN F+P+ISGISRRQLEVFLDICLSRYR KKIEAGTPIGAI
Sbjct: 47 KNTTLTKSIGEDDSSNLKN---FLPKISGISRRQLEVFLDICLSRYRLKKIEAGTPIGAI 103
Query: 181 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNI 312
GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EIINGASNI
Sbjct: 104 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGASNI 147
[17][TOP]
>UniRef100_Q6CB20 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CB20_YARLI
Length = 1483
Score = 171 bits (432), Expect = 5e-41
Identities = 86/169 (50%), Positives = 117/169 (69%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ ++ IS R ++ FL CL +Y+ ++E GT +GAIGA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1067 VNQVCRISHRMVDTFLQACLRKYQKAQVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1126
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMNVTLGVPRI EIIN + I TPIIT +L + + AR+VKGRIEKT LG +A I+
Sbjct: 1127 SMNVTLGVPRIKEIINASKAISTPIITTVLNNETELQAARIVKGRIEKTLLGDIAHYIQD 1186
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ A++ + +D I+ L ID + ++E+I++ KLKLK ++ I
Sbjct: 1187 EYSYAKASVRVRIDFNTIDHLLLEIDMDQIREAIIKAPKLKLKPGQVSI 1235
[18][TOP]
>UniRef100_A5E7R0 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E7R0_LODEL
Length = 1450
Score = 168 bits (425), Expect = 3e-40
Identities = 88/172 (51%), Positives = 119/172 (69%)
Frame = +1
Query: 64 NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243
N I ++ IS++ +++FL CL +Y K+EAGT +GAIGA SIGEPGTQMTLKTFHFAG
Sbjct: 1048 NAIDQLMKISKKTVKIFLTQCLYKYSRAKVEAGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1107
Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423
VASMNVTLGVPRI EIIN + I TPII A+L +D+ AR+ KGRIEKT+L V+ I
Sbjct: 1108 VASMNVTLGVPRIKEIINASKTISTPIINAVLVNEDDEIAARVAKGRIEKTSLKDVSIYI 1167
Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+ V A L I +D IE+ L +D + + E+I + KLK+ + ++ ++
Sbjct: 1168 EDVYKDNLAFLSIKVDLDSIEKLQLELDISNIAEAICKAPKLKISQSDVSVM 1219
[19][TOP]
>UniRef100_A9VCM2 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9VCM2_MONBE
Length = 1414
Score = 167 bits (422), Expect = 7e-40
Identities = 87/187 (46%), Positives = 119/187 (63%)
Frame = +1
Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198
E EDDP +NN + ++R + +F++ L ++R +E GT +GAIGA SIG
Sbjct: 1007 EAPAEDDPAKRHLVNNLM----SVTREDMRIFVEKALFKFRRTVVEPGTAVGAIGAQSIG 1062
Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378
EPGTQMTLKTFHFAGVA+MNVTLGVPRI EIIN A NI TP+ITA LE D + AR VK
Sbjct: 1063 EPGTQMTLKTFHFAGVAAMNVTLGVPRIKEIINAAKNISTPVITAKLENDREESFARQVK 1122
Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
R+E TLG+VA VV + + L+ K+I+ +L + NT+ +SI + K+K
Sbjct: 1123 ARLETLTLGEVADHFDVVCNEDGGYVRVKLNLKVIQRKHLEVTMNTIIDSIAASRLTKIK 1182
Query: 559 EKEIKIL 579
+ + ++
Sbjct: 1183 HEHLSVM 1189
[20][TOP]
>UniRef100_UPI00017927B1 PREDICTED: similar to AGAP004703-PA n=1 Tax=Acyrthosiphon pisum
RepID=UPI00017927B1
Length = 1355
Score = 166 bits (421), Expect = 9e-40
Identities = 91/175 (52%), Positives = 114/175 (65%)
Frame = +1
Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231
K LN + +I I+ QL F CL++Y IE GTP+GAI A SIGEPGTQMTLKTF
Sbjct: 947 KWLNLEVSKIQRITSTQLIKFYVTCLTKYMAAVIEPGTPVGAIAAQSIGEPGTQMTLKTF 1006
Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQV 411
HFAGVASMN+T GVPRI EIIN + NI TPIITA LE D + AR+VK RIE+TTL +V
Sbjct: 1007 HFAGVASMNITQGVPRIKEIINSSKNISTPIITAYLENDKDKEFARIVKARIEQTTLTEV 1066
Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
I VV S L I +D I+ L + T+++SIL T ++ +K ++ I
Sbjct: 1067 CSFIDVVLDSAECYLLIHIDMNRIKLLQLEVTIETIRDSILSTPRIGIKANQVNI 1121
[21][TOP]
>UniRef100_C4Y380 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y380_CLAL4
Length = 1491
Score = 165 bits (418), Expect = 2e-39
Identities = 90/186 (48%), Positives = 121/186 (65%)
Frame = +1
Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198
+ + ++DP + +N + IS+ +E FL CL +Y ++E GT +GAIGAHSIG
Sbjct: 1071 DMVLDEDPVSINAINQLMK----ISQTCVEEFLKQCLYKYLRARVEPGTAVGAIGAHSIG 1126
Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378
EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII +L D++ AR+VK
Sbjct: 1127 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIINTVLVNDEDEVAARVVK 1186
Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
GRIEKT L VA ++ V + A L I +D K IE+ L + + ++++I KLK+
Sbjct: 1187 GRIEKTLLRDVAFFVEDVYKNDMAYLSIKIDLKTIEKLQLELTMDNIRQAIANAPKLKIL 1246
Query: 559 EKEIKI 576
E+ +
Sbjct: 1247 NSEVSV 1252
[22][TOP]
>UniRef100_UPI000151B46E DNA-directed RNA polymerase III largest subunit n=1 Tax=Pichia
guilliermondii ATCC 6260 RepID=UPI000151B46E
Length = 1379
Score = 163 bits (412), Expect = 1e-38
Identities = 91/183 (49%), Positives = 118/183 (64%)
Frame = +1
Query: 28 TEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPG 207
++DDP L +N ++S IS + + FLD C+ +Y K+E GT +GAIGA SIGEPG
Sbjct: 963 SKDDPVQLNAVN----QLSKISLKAINKFLDQCIYKYSRAKVEPGTAVGAIGAQSIGEPG 1018
Query: 208 TQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRI 387
TQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII +L DD+ AR+VKGRI
Sbjct: 1019 TQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINGVLVNDDDEIAARVVKGRI 1078
Query: 388 EKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567
EKT L VA I+ V A L + +D IE+ L + ++ +I+ KLK+ +
Sbjct: 1079 EKTLLEDVAFFIEDVYKDNLAYLSVKIDLDTIEKLQLELTIESIAHAIVTAPKLKIVASD 1138
Query: 568 IKI 576
+ I
Sbjct: 1139 VSI 1141
[23][TOP]
>UniRef100_A5DM42 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
RepID=A5DM42_PICGU
Length = 1379
Score = 163 bits (412), Expect = 1e-38
Identities = 91/183 (49%), Positives = 118/183 (64%)
Frame = +1
Query: 28 TEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPG 207
++DDP L +N ++S IS + + FLD C+ +Y K+E GT +GAIGA SIGEPG
Sbjct: 963 SKDDPVQLNAVN----QLSKISLKAINKFLDQCIYKYSRAKVEPGTAVGAIGAQSIGEPG 1018
Query: 208 TQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRI 387
TQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII +L DD+ AR+VKGRI
Sbjct: 1019 TQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINGVLVNDDDEIAARVVKGRI 1078
Query: 388 EKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567
EKT L VA I+ V A L + +D IE+ L + ++ +I+ KLK+ +
Sbjct: 1079 EKTLLEDVAFFIEDVYKDNLAYLSVKIDLDTIEKLQLELTIESIAHAIVTAPKLKIVASD 1138
Query: 568 IKI 576
+ I
Sbjct: 1139 VSI 1141
[24][TOP]
>UniRef100_UPI0001923A96 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC1,
partial n=1 Tax=Hydra magnipapillata RepID=UPI0001923A96
Length = 730
Score = 162 bits (411), Expect = 1e-38
Identities = 85/151 (56%), Positives = 106/151 (70%)
Frame = +1
Query: 124 CLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGA 303
C RY + E GT +GA+ A SIGEPGTQMTLKTFHFAGVA+MN+TLGVPRI EIIN +
Sbjct: 448 CAKRYLHARCEPGTAVGALCAQSIGEPGTQMTLKTFHFAGVATMNITLGVPRIKEIINAS 507
Query: 304 SNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
I TPIITA LE DD+I AR VKGR+EKTTLG+V + I+ V T + L I +D + I
Sbjct: 508 KKISTPIITAPLEVDDDIEYARSVKGRVEKTTLGEVCEYIEEVFTPDACYLLIKIDSQRI 567
Query: 484 EEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
L ID+N +K ++ + KLKLK + + I
Sbjct: 568 NLLKLEIDANAIKYALCISPKLKLKPQFVSI 598
[25][TOP]
>UniRef100_A7SJ34 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7SJ34_NEMVE
Length = 1398
Score = 160 bits (405), Expect = 7e-38
Identities = 82/177 (46%), Positives = 119/177 (67%)
Frame = +1
Query: 46 HLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLK 225
H N + ++ + QL++FL +C +Y ++E G+ +GAI A SIGEPGTQMTLK
Sbjct: 991 HSITSNKIVDYVNRCTETQLKLFLSMCREKYLRARMEPGSAVGAICAQSIGEPGTQMTLK 1050
Query: 226 TFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLG 405
TFHFAGVASMN+TLGVPRI EIIN + I TPII+A L+ D + +AR VKGRIE+T LG
Sbjct: 1051 TFHFAGVASMNITLGVPRIKEIINASRKISTPIISAQLQDDRDQELARAVKGRIERTLLG 1110
Query: 406 QVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+V + I+ V + L I LD + I L +D++T++ +I + KL+L + ++++
Sbjct: 1111 EVTEYIEEVFLPDNCYLLIKLDTERIRLLKLEVDADTIQAAICSSRKLRLNQSQVRV 1167
[26][TOP]
>UniRef100_Q756K2 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
RepID=Q756K2_ASHGO
Length = 1459
Score = 160 bits (404), Expect = 9e-38
Identities = 86/170 (50%), Positives = 111/170 (65%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ ++ IS + + FLDI +S+YR K+E GT +GAIGAHSIGEPGTQMTLKTFHFAGVA
Sbjct: 1055 VNQLCKISSKLVRTFLDIAISKYRKAKVEPGTAVGAIGAHSIGEPGTQMTLKTFHFAGVA 1114
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMNVTLGVPRI EIIN + I TPII A L DD+ AR+VKGR+EKT L V I+
Sbjct: 1115 SMNVTLGVPRIKEIINASKVISTPIINATLVNDDDERAARVVKGRVEKTLLSDVIFYIQD 1174
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
V + L + +D IE+ L + + +I KLK+ ++ I+
Sbjct: 1175 VYRDNMSFLQVKVDLATIEKLQLELTVEDIAIAITSAPKLKISTGDVSIV 1224
[27][TOP]
>UniRef100_B9WF61 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WF61_CANDC
Length = 1448
Score = 160 bits (404), Expect = 9e-38
Identities = 86/172 (50%), Positives = 114/172 (66%)
Frame = +1
Query: 61 NNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFA 240
+N I ++S IS ++ FL+ CL +Y ++E GT +GAIGA SIGEPGTQMTLKTFHFA
Sbjct: 1045 SNAIDQLSKISSNAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIGEPGTQMTLKTFHFA 1104
Query: 241 GVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKS 420
GVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ KGRIEKT L VA
Sbjct: 1105 GVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAKGRIEKTLLEDVAFY 1164
Query: 421 IKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
I+ V A L I +D + I++ L ++ + +I KLK+ + ++ +
Sbjct: 1165 IEDVYKDNLAYLSIKVDLETIDKLQLELNLENIAVAIANAPKLKISQSDVSV 1216
[28][TOP]
>UniRef100_UPI00003BE6A5 hypothetical protein DEHA0G13849g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BE6A5
Length = 1457
Score = 159 bits (402), Expect = 1e-37
Identities = 85/169 (50%), Positives = 112/169 (66%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
I ++S +S + FL+ C+ +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1048 INQLSKVSANSINKFLEQCIYKYSRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1107
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMNVTLGVPRI EIIN + I TPII ++L DD+ AR+VKGR+EKT L VA I+
Sbjct: 1108 SMNVTLGVPRIKEIINASKVISTPIINSVLVNDDDEIAARVVKGRVEKTLLEDVAYFIED 1167
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
V + A L I +D IE+ L ++ ++ SI KLK+ ++ +
Sbjct: 1168 VYKNNMAYLSIKIDLNTIEKLQLELNIESIAHSIANAPKLKILAGDVSV 1216
[29][TOP]
>UniRef100_Q5A164 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5A164_CANAL
Length = 1448
Score = 159 bits (402), Expect = 1e-37
Identities = 87/186 (46%), Positives = 121/186 (65%)
Frame = +1
Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198
E + ++D +K ++ ++S IS + ++ FL+ CL +Y ++E GT +GAIGA SIG
Sbjct: 1035 EIVMDEDAVKVKAID----QLSKISSKAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIG 1090
Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378
EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ K
Sbjct: 1091 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAK 1150
Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
GRIEKT L VA I+ V A L I +D + I++ L ++ + +I KLK+
Sbjct: 1151 GRIEKTLLEDVAFYIEDVYKDNLAYLSIKIDLETIDKLQLELNLENIAVAIANAPKLKIA 1210
Query: 559 EKEIKI 576
+ ++ +
Sbjct: 1211 QSDVSV 1216
[30][TOP]
>UniRef100_Q5A0Z3 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5A0Z3_CANAL
Length = 1448
Score = 159 bits (402), Expect = 1e-37
Identities = 87/186 (46%), Positives = 121/186 (65%)
Frame = +1
Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198
E + ++D +K ++ ++S IS + ++ FL+ CL +Y ++E GT +GAIGA SIG
Sbjct: 1035 EIVMDEDAVKVKAID----QLSKISSKAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIG 1090
Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378
EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ K
Sbjct: 1091 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAK 1150
Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
GRIEKT L VA I+ V A L I +D + I++ L ++ + +I KLK+
Sbjct: 1151 GRIEKTLLEDVAFYIEDVYKDNLAYLSIKIDLETIDKLQLELNLENIAVAIANAPKLKIA 1210
Query: 559 EKEIKI 576
+ ++ +
Sbjct: 1211 QSDVSV 1216
[31][TOP]
>UniRef100_C4YGE6 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YGE6_CANAL
Length = 1448
Score = 159 bits (402), Expect = 1e-37
Identities = 87/186 (46%), Positives = 121/186 (65%)
Frame = +1
Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198
E + ++D +K ++ ++S IS + ++ FL+ CL +Y ++E GT +GAIGA SIG
Sbjct: 1035 EIVMDEDTVKVKAID----QLSKISSKAVKTFLEQCLYKYSRARVEPGTAVGAIGAQSIG 1090
Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378
EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L DD+ AR+ K
Sbjct: 1091 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDDDEIAARVAK 1150
Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
GRIEKT L VA I+ V A L I +D + I++ L ++ + +I KLK+
Sbjct: 1151 GRIEKTLLEDVAFYIEDVYKDNLAYLSIKIDLETIDKLQLELNLENIAVAIANAPKLKIA 1210
Query: 559 EKEIKI 576
+ ++ +
Sbjct: 1211 QSDVSV 1216
[32][TOP]
>UniRef100_Q6BI69 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Debaryomyces
hansenii RepID=RPC1_DEBHA
Length = 1457
Score = 159 bits (402), Expect = 1e-37
Identities = 85/169 (50%), Positives = 112/169 (66%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
I ++S +S + FL+ C+ +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1048 INQLSKVSANSINKFLEQCIYKYSRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1107
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMNVTLGVPRI EIIN + I TPII ++L DD+ AR+VKGR+EKT L VA I+
Sbjct: 1108 SMNVTLGVPRIKEIINASKVISTPIINSVLVNDDDEIAARVVKGRVEKTLLEDVAYFIED 1167
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
V + A L I +D IE+ L ++ ++ SI KLK+ ++ +
Sbjct: 1168 VYKNNMAYLSIKIDLNTIEKLQLELNIESIAHSIANAPKLKILAGDVSV 1216
[33][TOP]
>UniRef100_UPI000186E437 DNA-directed RNA polymerase III largest subunit, putative n=1
Tax=Pediculus humanus corporis RepID=UPI000186E437
Length = 1364
Score = 159 bits (401), Expect = 2e-37
Identities = 85/171 (49%), Positives = 115/171 (67%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
++L ++ I +I ++ Q+ F IC +Y K+EAGT +GA+ A SIGEPGTQMTL
Sbjct: 992 RNLSDIPKAIIQIERLTVSQIVEFFQICRKKYLRAKVEAGTAVGALAAQSIGEPGTQMTL 1051
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMN+T GVPRI EIIN + I TPIITA LE D + AR VKGRIEKTTL
Sbjct: 1052 KTFHFAGVASMNITQGVPRIKEIINASKKISTPIITAYLENDSDAEFARRVKGRIEKTTL 1111
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKL 555
G++++ I+ V + + LD I+ L +D+N++K + L T +LK+
Sbjct: 1112 GEISEYIEEVFLPDDFFIIVKLDVDRIKLLKLEVDANSIKYT-LCTARLKV 1161
[34][TOP]
>UniRef100_UPI0000D57400 PREDICTED: similar to AGAP004703-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D57400
Length = 1390
Score = 159 bits (401), Expect = 2e-37
Identities = 90/169 (53%), Positives = 111/169 (65%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ I ++ QL FL IC S+Y IE GT +GA+ A SIGEPGTQMTLKTFHFAGVA
Sbjct: 1003 VKEIERLTCSQLVTFLQICGSKYTRSIIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVA 1062
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMN+T GVPRI EIIN + +I TPIITA L +I AR VK RIE+TTLG+VA I
Sbjct: 1063 SMNITQGVPRIKEIINASKDISTPIITASLTNPRDIGFAREVKARIERTTLGEVATFIDE 1122
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ T L I L+ I+ L I++ TV+ SI T KLKLK E+++
Sbjct: 1123 IYTQYDCFLLIQLNYDRIKLLKLEINAETVRYSIC-TSKLKLKPNEVRV 1170
[35][TOP]
>UniRef100_Q5KFV9 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KFV9_CRYNE
Length = 1466
Score = 159 bits (401), Expect = 2e-37
Identities = 89/184 (48%), Positives = 116/184 (63%)
Frame = +1
Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204
+ DDP + L N + ++ QL FL+ C RY KIE G+ +GA+GA SIGEP
Sbjct: 1053 LNSDDPAVQRVLEN----ANKVTEAQLSSFLENCRIRYLRAKIEPGSTVGAVGAQSIGEP 1108
Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384
GTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII A L ++ AR+VKGR
Sbjct: 1109 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIIAAELAIPESETAARIVKGR 1168
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
IEKT LG +A I+ T+ +A + + +D + L I ++K ++++ KLK+ E
Sbjct: 1169 IEKTVLGDIAAVIEESWTNANAYIEVHIDMDAVRRLQLEISLESIKWALVRANKLKIPEG 1228
Query: 565 EIKI 576
I I
Sbjct: 1229 SIHI 1232
[36][TOP]
>UniRef100_Q55QA7 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q55QA7_CRYNE
Length = 1466
Score = 159 bits (401), Expect = 2e-37
Identities = 89/184 (48%), Positives = 116/184 (63%)
Frame = +1
Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204
+ DDP + L N + ++ QL FL+ C RY KIE G+ +GA+GA SIGEP
Sbjct: 1053 LNSDDPAVQRVLEN----ANKVTEAQLSSFLENCRIRYLRAKIEPGSTVGAVGAQSIGEP 1108
Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384
GTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII A L ++ AR+VKGR
Sbjct: 1109 GTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKVISTPIIAAELAIPESETAARIVKGR 1168
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
IEKT LG +A I+ T+ +A + + +D + L I ++K ++++ KLK+ E
Sbjct: 1169 IEKTVLGDIAAVIEESWTNANAYIEVHIDMDAVRRLQLEISLESIKWALVRANKLKIPEG 1228
Query: 565 EIKI 576
I I
Sbjct: 1229 SIHI 1232
[37][TOP]
>UniRef100_A7TNS6 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
70294 RepID=A7TNS6_VANPO
Length = 1460
Score = 158 bits (399), Expect = 3e-37
Identities = 81/170 (47%), Positives = 116/170 (68%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ ++ I+ + +E FL+I +S+YR ++E GT +GAIGA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1056 VEKLCKITEKTVEKFLEIAMSKYRRARVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1115
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGRIEKT L VA ++
Sbjct: 1116 SMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDKRAARVVKGRIEKTLLSDVAYYVQD 1175
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
V + L + +D I++ L + + ++ + KLK++ +++I+
Sbjct: 1176 VYKDNLSFLEVKIDLSTIDKLQLELTIEDIAVALTRAPKLKIQTTDVQIV 1225
[38][TOP]
>UniRef100_A4IHM8 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
RepID=A4IHM8_XENTR
Length = 1390
Score = 157 bits (398), Expect = 4e-37
Identities = 84/167 (50%), Positives = 116/167 (69%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1001 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1060
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + NI TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1061 NITLGVPRIKEIINASKNISTPIITAHLDIDDDADFARLVKGRIEKTLLGEISEYIEEVF 1120
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
L + L + I L +++ TV+ SI + KL++K +I +
Sbjct: 1121 LPDDCFLLVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDIAV 1166
[39][TOP]
>UniRef100_C4R7G6 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R7G6_PICPG
Length = 1460
Score = 157 bits (398), Expect = 4e-37
Identities = 86/186 (46%), Positives = 122/186 (65%)
Frame = +1
Query: 19 ETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIG 198
E+ ++ P H +++ I ++ I+ + FL++ ++Y K+E GT +GAIGA SIG
Sbjct: 1036 ESFVDESPDH--SVSILINQLYRITEAAVTKFLELSATKYNRAKVEPGTAVGAIGAQSIG 1093
Query: 199 EPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVK 378
EPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L +D+ AR+VK
Sbjct: 1094 EPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKTISTPIINAVLVNEDDERAARVVK 1153
Query: 379 GRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
GRIEKT L V I+ V A L + +D + IE L ++ + ++ +I++ KLKL
Sbjct: 1154 GRIEKTILQDVVYYIQDVYKENQAYLQVKVDLETIERLQLELNIDEIRLAIVKAPKLKLA 1213
Query: 559 EKEIKI 576
+++ I
Sbjct: 1214 LEDVII 1219
[40][TOP]
>UniRef100_UPI00015A5DDB PREDICTED: im:7139382 n=1 Tax=Danio rerio RepID=UPI00015A5DDB
Length = 1390
Score = 157 bits (396), Expect = 7e-37
Identities = 86/180 (47%), Positives = 120/180 (66%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
+PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM
Sbjct: 996 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1048
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPII+A L+T+D+ + AR+VKGRIEKT
Sbjct: 1049 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIISANLDTNDDPDFARLVKGRIEKT 1108
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
LG++++ I+ V + + L I L +++ TV+ SI T KL++K ++++
Sbjct: 1109 LLGEISEYIEEVFLPDDTFILVKLSLDRIRLLRLEVNAETVRYSIC-TSKLRVKPGDVQV 1167
[41][TOP]
>UniRef100_UPI00015B5AFA PREDICTED: hypothetical protein n=1 Tax=Nasonia vitripennis
RepID=UPI00015B5AFA
Length = 1372
Score = 156 bits (395), Expect = 1e-36
Identities = 89/180 (49%), Positives = 114/180 (63%), Gaps = 2/180 (1%)
Frame = +1
Query: 43 KHLKNLNN--FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
+H+K+ +N I ++ QL F+ C +Y KIE GT +GA+ A SIGEPGTQM
Sbjct: 973 QHIKSNDNQPVYKYIERLTVSQLAEFIHTCKEKYMKAKIEPGTAVGALAAQSIGEPGTQM 1032
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVASMN+T GVPRI EIIN I TPIITA LE D + AR VKGRIEKT
Sbjct: 1033 TLKTFHFAGVASMNITQGVPRIKEIINANPKISTPIITAALENDTDPEFARRVKGRIEKT 1092
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
TLG++ + I+ V L + +D ++ L +D N+++ S L T KLKL K + I
Sbjct: 1093 TLGEITEYIEEVYLPDDCFLLLKIDIDRVKLLKLEVDVNSIRYS-LCTSKLKLNPKNVVI 1151
[42][TOP]
>UniRef100_UPI0000DA3EBF PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide
A, 155kDa n=1 Tax=Rattus norvegicus RepID=UPI0000DA3EBF
Length = 1390
Score = 156 bits (395), Expect = 1e-36
Identities = 82/167 (49%), Positives = 116/167 (69%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+R Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITRTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDMDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167
[43][TOP]
>UniRef100_UPI0000DA3DE9 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide
A, 155kDa n=2 Tax=Rattus norvegicus RepID=UPI0000DA3DE9
Length = 1362
Score = 156 bits (395), Expect = 1e-36
Identities = 82/167 (49%), Positives = 116/167 (69%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+R Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITRTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDMDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167
[44][TOP]
>UniRef100_Q5RK26 Polr3a protein (Fragment) n=1 Tax=Rattus norvegicus
RepID=Q5RK26_RAT
Length = 491
Score = 156 bits (395), Expect = 1e-36
Identities = 82/167 (49%), Positives = 116/167 (69%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+R Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 103 QLDRITRTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 162
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 163 NITLGVPRIKEIINASKAISTPIITAQLDMDDDADYARLVKGRIEKTLLGEISEYIEEVF 222
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 223 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 268
[45][TOP]
>UniRef100_C7GMM0 Rpo31p n=1 Tax=Saccharomyces cerevisiae JAY291 RepID=C7GMM0_YEAS2
Length = 1460
Score = 156 bits (395), Expect = 1e-36
Identities = 82/175 (46%), Positives = 115/175 (65%)
Frame = +1
Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234
N+ + ++ IS + + FL+I L +YR ++E GT IGAIGA SIGEPGTQMTLKTFH
Sbjct: 1051 NVKTSVSQLYRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPGTQMTLKTFH 1110
Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414
FAGVASMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L VA
Sbjct: 1111 FAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVA 1170
Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
++ V + + + +D I++ L + + +I + KLK++ ++ I+
Sbjct: 1171 FYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIEDIAVAITRASKLKIQASDVNII 1225
[46][TOP]
>UniRef100_B3LJF9 DNA-directed RNA polymerase n=3 Tax=Saccharomyces cerevisiae
RepID=B3LJF9_YEAS1
Length = 1460
Score = 156 bits (395), Expect = 1e-36
Identities = 82/175 (46%), Positives = 115/175 (65%)
Frame = +1
Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234
N+ + ++ IS + + FL+I L +YR ++E GT IGAIGA SIGEPGTQMTLKTFH
Sbjct: 1051 NVKTSVSQLYRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPGTQMTLKTFH 1110
Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414
FAGVASMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L VA
Sbjct: 1111 FAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVA 1170
Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
++ V + + + +D I++ L + + +I + KLK++ ++ I+
Sbjct: 1171 FYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIEDIAVAITRASKLKIQASDVNII 1225
[47][TOP]
>UniRef100_P04051 DNA-directed RNA polymerase III subunit RPC1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPC1_YEAST
Length = 1460
Score = 156 bits (395), Expect = 1e-36
Identities = 82/175 (46%), Positives = 115/175 (65%)
Frame = +1
Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234
N+ + ++ IS + + FL+I L +YR ++E GT IGAIGA SIGEPGTQMTLKTFH
Sbjct: 1051 NVKTSVSQLYRISEKSVRKFLEIALFKYRKARLEPGTAIGAIGAQSIGEPGTQMTLKTFH 1110
Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414
FAGVASMNVTLGVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L VA
Sbjct: 1111 FAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVA 1170
Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
++ V + + + +D I++ L + + +I + KLK++ ++ I+
Sbjct: 1171 FYVQDVYKDNLSFIQVRIDLGTIDKLQLELTIEDIAVAITRASKLKIQASDVNII 1225
[48][TOP]
>UniRef100_UPI00016E6B79 UPI00016E6B79 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E6B79
Length = 1390
Score = 156 bits (394), Expect = 1e-36
Identities = 86/180 (47%), Positives = 119/180 (66%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
+PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM
Sbjct: 996 EPKVLYQLDRITPT-------QLERFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1048
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT
Sbjct: 1049 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1108
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
LG++++ I+ V + + L + I L +++ TV+ SI + KL++K +I +
Sbjct: 1109 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDIAV 1167
[49][TOP]
>UniRef100_A3GEY3 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GEY3_PICST
Length = 1448
Score = 156 bits (394), Expect = 1e-36
Identities = 85/171 (49%), Positives = 112/171 (65%)
Frame = +1
Query: 64 NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243
N + ++ IS + +E FL+ L +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAG
Sbjct: 1047 NAVDQLLKISSKTIEKFLEQSLYKYSKAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAG 1106
Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423
VASMNVTLGVPRI EIIN + I TPII ++L DD+ AR+VKGR+EKT L VA I
Sbjct: 1107 VASMNVTLGVPRIKEIINASKTISTPIINSVLVNDDDEIAARVVKGRVEKTLLKDVAFFI 1166
Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ V + A L I +D IE+ L + + + +I KLK+ ++ +
Sbjct: 1167 EDVYKNEMAYLSIKIDMSTIEKLQLELTIDDIVTAIHNAPKLKISPGDVSV 1217
[50][TOP]
>UniRef100_Q4P157 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P157_USTMA
Length = 1400
Score = 155 bits (392), Expect = 2e-36
Identities = 82/156 (52%), Positives = 108/156 (69%)
Frame = +1
Query: 112 FLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEI 291
FL+ C +Y KIE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EI
Sbjct: 1033 FLEQCYIKYMKAKIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI 1092
Query: 292 INGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLD 471
IN A I TPII A L ++ + AR+VKGRIEKT LG +A I+ ++ L + +D
Sbjct: 1093 INAAKVINTPIIEAKLVSEKSERAARIVKGRIEKTYLGDIASVIEEAWAAQYTYLGVHID 1152
Query: 472 EKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+ I++ L I N +K +I+ KLK+KE+ + ++
Sbjct: 1153 MEAIQKLQLEITLNDIKWAIVNAPKLKIKEERVMVV 1188
[51][TOP]
>UniRef100_A8PGH2 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8PGH2_COPC7
Length = 1403
Score = 155 bits (392), Expect = 2e-36
Identities = 83/164 (50%), Positives = 109/164 (66%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ L +FLDIC RY +IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1023 VTESHLRIFLDICWERYVKARIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1082
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A I TPII+ L T D+ AR+VKGR+EKT LG V ++
Sbjct: 1083 GVPRIKEIINAAKAISTPIISCKLVTPDSEPSARIVKGRLEKTLLGDVVSVLEEAWAPDY 1142
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+ I +D I++ L + + +K +I+ KLK+K++ I I+
Sbjct: 1143 TYIGIIVDVDAIQKLQLELTLDDIKWAIVAAKKLKIKQESITII 1186
[52][TOP]
>UniRef100_Q6CMC7 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CMC7_KLULA
Length = 1457
Score = 155 bits (391), Expect = 3e-36
Identities = 82/164 (50%), Positives = 110/164 (67%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
IS+ ++ FL I +S+Y ++E GT +GAIGA SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1060 ISKILVQKFLSIAISKYHRARVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1119
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TPII A+L D++ AR+VKGR+EKT L V+ ++ +
Sbjct: 1120 GVPRIKEIINASKVISTPIINAVLVNDNDERAARVVKGRVEKTLLSDVSFYVQDIYRDNM 1179
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
A L I +D + IE+ L + + +I + KLK+ +I I+
Sbjct: 1180 AFLQIKIDSETIEKLQLELTLEDIVVAIAKAPKLKIGTNDISII 1223
[53][TOP]
>UniRef100_UPI00017B08B5 UPI00017B08B5 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B08B5
Length = 1391
Score = 154 bits (390), Expect = 4e-36
Identities = 85/174 (48%), Positives = 116/174 (66%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
+PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM
Sbjct: 998 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1050
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT
Sbjct: 1051 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1110
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
LG++++ I+ V + + L + I L +++ TV+ SI + KL++K
Sbjct: 1111 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVK 1163
[54][TOP]
>UniRef100_A8Q6K6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q6K6_MALGO
Length = 1376
Score = 154 bits (390), Expect = 4e-36
Identities = 81/164 (49%), Positives = 110/164 (67%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S + F+++C +Y KIE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1003 VSEATILEFINLCWDKYMRAKIEPGSAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1062
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A I TPII A L ++ + AR+VKGRIEKT LG VA I+ +
Sbjct: 1063 GVPRIKEIINAAKVINTPIIAATLVSEKSEQAARIVKGRIEKTYLGDVASVIEEAWSGTY 1122
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+ I +D I++ L + + +K +I+ ++K+KE+ I +L
Sbjct: 1123 TYIGIDIDTAAIQKLQLEVTLDDIKRAIVAMPRMKIKEERIIVL 1166
[55][TOP]
>UniRef100_Q5CWY0 DNA-directed RNA polymerase n=2 Tax=Cryptosporidium parvum
RepID=Q5CWY0_CRYPV
Length = 1871
Score = 154 bits (389), Expect = 5e-36
Identities = 87/167 (52%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
I+ RQL F+ S+Y E G +GAI A SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1437 ITIRQLYEFIKASWSKYMKAITEPGEAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNVTL 1496
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A+ I TPII A LE D + N A++VKG I KT L +V I+ + +
Sbjct: 1497 GVPRIKEIINAATKILTPIIEAKLENDSDFNYAQIVKGSIVKTLLNEVVSDIEELYSPNG 1556
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579
+ I+L+E+ I+ YL+I++ TV++SI+ G K+KLK ++I++L
Sbjct: 1557 VFININLNEETIKGHYLDINAYTVRDSIVSHGPISKIKLKLEDIQVL 1603
[56][TOP]
>UniRef100_Q5CK97 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CK97_CRYHO
Length = 1869
Score = 154 bits (389), Expect = 5e-36
Identities = 87/167 (52%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
I+ RQL F+ S+Y E G +GAI A SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1435 ITIRQLYEFIKASWSKYMKAITEPGEAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNVTL 1494
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A+ I TPII A LE D + N A++VKG I KT L +V I+ + +
Sbjct: 1495 GVPRIKEIINAATKILTPIIEAKLENDSDFNYAQIVKGSIVKTLLNEVVSDIEELYSPNG 1554
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579
+ I+L+E+ I+ YL+I++ TV++SI+ G K+KLK ++I++L
Sbjct: 1555 VFININLNEETIKGHYLDINAYTVRDSIVSHGPISKIKLKLEDIQVL 1601
[57][TOP]
>UniRef100_C5DJG5 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DJG5_LACTC
Length = 1460
Score = 154 bits (389), Expect = 5e-36
Identities = 82/170 (48%), Positives = 112/170 (65%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ ++ IS + + FL+I + +Y K+E GT +GA+GAHSIGEPGTQMTLKTFHFAGVA
Sbjct: 1055 VDQLCKISSKLVLKFLEIAIFKYHKAKVEPGTAVGAVGAHSIGEPGTQMTLKTFHFAGVA 1114
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMNVTLGVPRI EIIN + I TPII A+L +++ AR+VKGRIEKT L VA I+
Sbjct: 1115 SMNVTLGVPRIKEIINASKVISTPIINAVLVNNNDERAARVVKGRIEKTLLSDVAFYIQD 1174
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
V + L + +D IE+ L + + +I + KLK+ ++ I+
Sbjct: 1175 VYKDNMSFLQVKVDLGTIEKLQLELTVEDIAVAITRAAKLKIAASDVSIM 1224
[58][TOP]
>UniRef100_UPI000155D900 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
n=1 Tax=Equus caballus RepID=UPI000155D900
Length = 1390
Score = 154 bits (388), Expect = 6e-36
Identities = 81/167 (48%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDRDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167
[59][TOP]
>UniRef100_UPI0001554E8D PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide
A, 155kDa n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0001554E8D
Length = 1382
Score = 154 bits (388), Expect = 6e-36
Identities = 81/167 (48%), Positives = 116/167 (69%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 994 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1053
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L++DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1054 NITLGVPRIKEIINASKAISTPIITAQLDSDDDSDFARLVKGRIEKTLLGEISEYIEEVF 1113
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI + KL++K ++ +
Sbjct: 1114 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1159
[60][TOP]
>UniRef100_UPI0000F2AF25 PREDICTED: similar to Proteasome (prosome, macropain) subunit, alpha
type, 2 n=1 Tax=Monodelphis domestica RepID=UPI0000F2AF25
Length = 1390
Score = 154 bits (388), Expect = 6e-36
Identities = 81/167 (48%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDQDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167
[61][TOP]
>UniRef100_B2RXC6 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=B2RXC6_MOUSE
Length = 1390
Score = 154 bits (388), Expect = 6e-36
Identities = 81/167 (48%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167
[62][TOP]
>UniRef100_B0DK21 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DK21_LACBS
Length = 1397
Score = 154 bits (388), Expect = 6e-36
Identities = 81/166 (48%), Positives = 110/166 (66%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261
S ++ QL FLD+C +Y +IE G+ +GA+GA SIGEPGTQMTLKTFHFAGVASMNV
Sbjct: 1016 SKVTESQLRKFLDLCWVKYVKARIEPGSTVGAVGAQSIGEPGTQMTLKTFHFAGVASMNV 1075
Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
TLGVPRI EIIN A I TPII+ L T D+ AR+VK R+EKT LG +A ++
Sbjct: 1076 TLGVPRIKEIINAAKAISTPIISCKLVTSDSEASARIVKARLEKTLLGDIASVLEEAWAP 1135
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+ I +D I++ L + + +K +I+ KLK+K++ I ++
Sbjct: 1136 EYTYIGIIVDVNAIQKLQLELTLDDIKWAIVNAKKLKIKQESITVM 1181
[63][TOP]
>UniRef100_UPI0000E22532 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
n=1 Tax=Pan troglodytes RepID=UPI0000E22532
Length = 1349
Score = 153 bits (387), Expect = 8e-36
Identities = 81/167 (48%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 961 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1020
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1021 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1080
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1081 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1126
[64][TOP]
>UniRef100_O14802 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Homo sapiens
RepID=RPC1_HUMAN
Length = 1390
Score = 153 bits (387), Expect = 8e-36
Identities = 81/167 (48%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1167
[65][TOP]
>UniRef100_Q6FKG9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FKG9_CANGA
Length = 1459
Score = 153 bits (386), Expect = 1e-35
Identities = 82/170 (48%), Positives = 112/170 (65%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
I ++ I+ ++ FL+I +S+Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1055 ITQLYRITEDAVQKFLEIAISKYHRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1114
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
SMNVTLGVPRI EIIN + I TPII A+L +++ AR+VKGRIEKT L V I+
Sbjct: 1115 SMNVTLGVPRIKEIINASKVISTPIINAVLVNNNDERAARVVKGRIEKTLLSDVCYYIQD 1174
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
V A L + +D I++ L + + +I + KLK++ ++ +L
Sbjct: 1175 VYKENMAYLQVKVDLNTIDKLQLELTIEDIAIAITRAPKLKIQTSDVTVL 1224
[66][TOP]
>UniRef100_UPI00017EFF90 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide
A, 155kDa n=1 Tax=Sus scrofa RepID=UPI00017EFF90
Length = 1390
Score = 152 bits (385), Expect = 1e-35
Identities = 81/167 (48%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ I L + I L +++ TV+ SI + KL++K ++ +
Sbjct: 1122 LPDDCFILIKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1167
[67][TOP]
>UniRef100_Q8TCW3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=Q8TCW3_HUMAN
Length = 435
Score = 152 bits (385), Expect = 1e-35
Identities = 81/165 (49%), Positives = 114/165 (69%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 271 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 330
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 331 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 390
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570
+ + L + I L +++ TV+ SI T KL++K ++
Sbjct: 391 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDV 434
[68][TOP]
>UniRef100_UPI000194E725 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A,
155kDa, partial n=1 Tax=Taeniopygia guttata
RepID=UPI000194E725
Length = 346
Score = 152 bits (384), Expect = 2e-35
Identities = 81/167 (48%), Positives = 114/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 73 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 132
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 133 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 192
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI KL++K ++ +
Sbjct: 193 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-VSKLRVKPGDVAV 238
[69][TOP]
>UniRef100_UPI000194C79C PREDICTED: polymerase (RNA) III (DNA directed) polypeptide A, 155kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C79C
Length = 1390
Score = 152 bits (384), Expect = 2e-35
Identities = 81/167 (48%), Positives = 114/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-VSKLRVKPGDVAV 1167
[70][TOP]
>UniRef100_UPI00004BFD05 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide
A, 155kDa n=1 Tax=Canis lupus familiaris
RepID=UPI00004BFD05
Length = 1390
Score = 152 bits (384), Expect = 2e-35
Identities = 80/167 (47%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI + KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1167
[71][TOP]
>UniRef100_UPI0000EB3E23 DNA-directed RNA polymerase III subunit RPC1 (EC 2.7.7.6) (RNA
polymerase III subunit C1) (DNA-directed RNA polymerase
III subunit A) (DNA-directed RNA polymerase III largest
subunit) (RPC155) (C160). n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB3E23
Length = 1393
Score = 152 bits (384), Expect = 2e-35
Identities = 80/167 (47%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1005 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1064
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1065 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1124
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI + KL++K ++ +
Sbjct: 1125 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1170
[72][TOP]
>UniRef100_UPI0000612BF9 UPI0000612BF9 related cluster n=1 Tax=Bos taurus RepID=UPI0000612BF9
Length = 1392
Score = 152 bits (384), Expect = 2e-35
Identities = 80/167 (47%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1004 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1063
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1064 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1123
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI + KL++K ++ +
Sbjct: 1124 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1169
[73][TOP]
>UniRef100_A4IF62 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Bos taurus
RepID=RPC1_BOVIN
Length = 1390
Score = 152 bits (384), Expect = 2e-35
Identities = 80/167 (47%), Positives = 115/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQIEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI + KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSICMS-KLRVKPGDVAV 1167
[74][TOP]
>UniRef100_UPI00003AE23E polymerase (RNA) III (DNA directed) polypeptide A, 155kDa n=1
Tax=Gallus gallus RepID=UPI00003AE23E
Length = 1390
Score = 152 bits (383), Expect = 2e-35
Identities = 81/167 (48%), Positives = 114/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-ISKLRVKPGDVAV 1167
[75][TOP]
>UniRef100_Q16SE0 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16SE0_AEDAE
Length = 1298
Score = 152 bits (383), Expect = 2e-35
Identities = 84/178 (47%), Positives = 113/178 (63%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
K ++ + + +R QLE FL ++Y E GT +GA+ A SIGEPGTQMTL
Sbjct: 906 KRYRHCSKVSLEVERTTRGQLEAFLTQVRNKYNKAITEPGTAVGALAAQSIGEPGTQMTL 965
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMN+T GVPRI+EIIN I TPIITA +E + ++ AR VK RIEKTTL
Sbjct: 966 KTFHFAGVASMNITQGVPRIVEIINATKAISTPIITAEIEDNTSMEFARKVKARIEKTTL 1025
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
G+++ I+ S L I LD I L +++ T++ SI T KLKLK++ +++
Sbjct: 1026 GEISSYIEEAYKSDDCFLLIKLDLDRIRVLGLEVNAETIRYSIC-TSKLKLKQENVEV 1082
[76][TOP]
>UniRef100_Q16PD2 DNA-directed RNA polymerase n=1 Tax=Aedes aegypti RepID=Q16PD2_AEDAE
Length = 1298
Score = 152 bits (383), Expect = 2e-35
Identities = 84/178 (47%), Positives = 113/178 (63%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
K ++ + + +R QLE FL ++Y E GT +GA+ A SIGEPGTQMTL
Sbjct: 906 KRYRHCSKVSLEVERTTRGQLEAFLTQVRNKYNKAITEPGTAVGALAAQSIGEPGTQMTL 965
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMN+T GVPRI+EIIN I TPIITA +E + ++ AR VK RIEKTTL
Sbjct: 966 KTFHFAGVASMNITQGVPRIVEIINATKAISTPIITAEIEDNTSMEFARKVKARIEKTTL 1025
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
G+++ I+ S L I LD I L +++ T++ SI T KLKLK++ +++
Sbjct: 1026 GEISSYIEEAYKSDDCFLLIKLDLDRIRVLGLEVNAETIRYSIC-TSKLKLKQENVEV 1082
[77][TOP]
>UniRef100_A2DEX5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
RepID=A2DEX5_TRIVA
Length = 1657
Score = 152 bits (383), Expect = 2e-35
Identities = 82/170 (48%), Positives = 112/170 (65%)
Frame = +1
Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234
+++++I ++ LE F+ C+ R E G +GA+ SIGEP TQMTL++FH
Sbjct: 968 SMDSYIRATIPFTKSFLEEFVKFCMHRCEKSMAEPGMTVGAVAGQSIGEPATQMTLRSFH 1027
Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414
FAGVASMNVTLGVPRI E++N S IKTPIITA L + + AR+VKG I++ TLGQV
Sbjct: 1028 FAGVASMNVTLGVPRIEEVMNAVSEIKTPIITANLLSQRDEIAARIVKGIIDRVTLGQVC 1087
Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
K I+ +S + I LD +II EA LNI S TV+ SI+ T K+ +K++
Sbjct: 1088 KHIEYNQNEKSCYIDIELDAEIIREAKLNITSETVRRSIVNTPKIGVKDE 1137
[78][TOP]
>UniRef100_Q5ZL98 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Gallus gallus
RepID=RPC1_CHICK
Length = 1390
Score = 152 bits (383), Expect = 2e-35
Identities = 81/167 (48%), Positives = 114/167 (68%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1002 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1062 NITLGVPRIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI KL++K ++ +
Sbjct: 1122 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-ISKLRVKPGDVAV 1167
[79][TOP]
>UniRef100_B7G2E6 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7G2E6_PHATR
Length = 1281
Score = 151 bits (382), Expect = 3e-35
Identities = 85/166 (51%), Positives = 110/166 (66%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261
S ++ QLE+ L L + +E G +GAIGA SI EPGTQMTLKTFHF+G++SMNV
Sbjct: 940 SRMTETQLELLLTEALDKCMLAYVEPGEAVGAIGAQSISEPGTQMTLKTFHFSGISSMNV 999
Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
TLGVPR+ EIIN A I TPIITA LE D+N AR+VK IEKTTLG+V+K +K V
Sbjct: 1000 TLGVPRLKEIINAAKLISTPIITAKLECDNNKVAARIVKAVIEKTTLGEVSKYMKEVYAP 1059
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
S + + LD IE+ LN+D ++V+ SIL K K +++L
Sbjct: 1060 GSCYISVELDMDAIEQLKLNVDVHSVRRSILYGTKGIAKNAGMQML 1105
[80][TOP]
>UniRef100_B4L5G1 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L5G1_DROMO
Length = 1382
Score = 151 bits (382), Expect = 3e-35
Identities = 87/186 (46%), Positives = 120/186 (64%)
Frame = +1
Query: 13 LTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHS 192
+T+ I++ K+ + +I ISR QL FL RY E GT +GAI A S
Sbjct: 974 VTKRISKLQEKYGAEHKDLCKQIECISREQLLEFLRRINDRYNRAVTEPGTAVGAIAAQS 1033
Query: 193 IGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARM 372
IGEPGTQMTLKTFHFAGVASMN+T GVPRI+EIIN I TPIITA L + ++ AR
Sbjct: 1034 IGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELRNNTSMEFARQ 1093
Query: 373 VKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
VK RIEKTTLG+++ +++V +S L I +D I+ L+ID +++ SIL++ +L+
Sbjct: 1094 VKARIEKTTLGELSSFVELVCGPQSCHLVIGIDTARIKVLGLHIDLDSIMCSILKS-RLR 1152
Query: 553 LKEKEI 570
+K ++
Sbjct: 1153 IKANQL 1158
[81][TOP]
>UniRef100_UPI0001A2B922 UPI0001A2B922 related cluster n=1 Tax=Danio rerio
RepID=UPI0001A2B922
Length = 438
Score = 151 bits (381), Expect = 4e-35
Identities = 86/182 (47%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
+PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM
Sbjct: 265 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 317
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPII+A L+T+D+ + AR+VKGRIEKT
Sbjct: 318 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIISANLDTNDDPDFARLVKGRIEKT 377
Query: 397 TLGQVAKSIKVVATSRSAALFI--SLDE-KIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567
LG++++ I+ V + + SLD +++ + +++ TV+ SI T KL++K +
Sbjct: 378 LLGEISEYIEEVFLPDDTFILVKLSLDRIRLLCFCCVQVNAETVRYSIC-TSKLRVKPGD 436
Query: 568 IK 573
++
Sbjct: 437 VQ 438
[82][TOP]
>UniRef100_Q7PMU6 DNA-directed RNA polymerase n=1 Tax=Anopheles gambiae
RepID=Q7PMU6_ANOGA
Length = 1379
Score = 151 bits (381), Expect = 4e-35
Identities = 83/159 (52%), Positives = 107/159 (67%)
Frame = +1
Query: 100 QLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 279
QLE FL ++Y E GT +GA+ A SIGEPGTQMTLKTFHFAGVASMN+T GVPR
Sbjct: 1006 QLEEFLLQVRNKYNKAVTEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPR 1065
Query: 280 IMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALF 459
I+EIIN I TPIITA +E + N+ AR VK RIEKTTLG+++ I+ V L
Sbjct: 1066 IVEIINATKAISTPIITAEIENNTNMEFARKVKARIEKTTLGEISSYIEEVYKMNECFLL 1125
Query: 460 ISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
I LD I L ++++T++ SI T KLKLK++ +++
Sbjct: 1126 IKLDLGRIRVLGLEVNADTIRYSIC-TSKLKLKQENVEV 1163
[83][TOP]
>UniRef100_C5DY31 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DY31_ZYGRC
Length = 1458
Score = 151 bits (381), Expect = 4e-35
Identities = 83/193 (43%), Positives = 120/193 (62%)
Frame = +1
Query: 1 ENTKLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAI 180
++ L E + ED + + + ++ I+ + + FL + + +YR K+E GT +GAI
Sbjct: 1038 QSVDLDENVPED-------IRHSVDQVYRITDKMVREFLRVAILKYRRAKVEPGTAVGAI 1090
Query: 181 GAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN 360
GA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII A+L + +
Sbjct: 1091 GAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINAVLVNESDER 1150
Query: 361 IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQT 540
AR+VKGRIEKT L VA I+ V + L + +D I++ L + + ++ +
Sbjct: 1151 AARVVKGRIEKTLLSDVAFYIQDVYRDNLSYLQVRVDLSTIDKLQLELTIEDIAVAMTRA 1210
Query: 541 GKLKLKEKEIKIL 579
KLK++ ++ I+
Sbjct: 1211 PKLKIQASDVHIV 1223
[84][TOP]
>UniRef100_B8C4M1 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8C4M1_THAPS
Length = 1422
Score = 150 bits (379), Expect = 7e-35
Identities = 83/146 (56%), Positives = 101/146 (69%)
Frame = +1
Query: 100 QLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 279
Q+ FL LS+Y +E G +GAIGA SI EPGTQMTLKTFHFAGV+SMNVTLGVPR
Sbjct: 1033 QVNEFLKTALSKYTKAMVEPGEAVGAIGAQSISEPGTQMTLKTFHFAGVSSMNVTLGVPR 1092
Query: 280 IMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALF 459
+ EIIN + NI TPIITA L DDN AR+VK IEKTTLG+++ +K V +S L
Sbjct: 1093 LKEIINASKNISTPIITAKLVQDDNKVGARIVKAGIEKTTLGEISIYVKEVYSSGDCYLS 1152
Query: 460 ISLDEKIIEEAYLNIDSNTVKESILQ 537
I LD I + LNID+ +V+ IL+
Sbjct: 1153 ILLDMDAIRQLRLNIDAVSVRRCILK 1178
[85][TOP]
>UniRef100_B9PZ91 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
RepID=B9PZ91_TOXGO
Length = 1747
Score = 149 bits (377), Expect = 1e-34
Identities = 83/167 (49%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ R + FL +Y EAG +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1356 VTVRHILEFLRCSWRKYVKAISEAGEAVGAMGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1415
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A I+TPII L D++ N A MVK RIEKT L + IK V
Sbjct: 1416 GVPRIKEIINAAQKIQTPIIVVPLVNDEDYNYAVMVKNRIEKTLLSECCSYIKEVYAPDG 1475
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579
A L + LD+ I + +L+I++NTVK++IL+ K+++ + ++I+
Sbjct: 1476 AWLVVKLDQHTIRKLFLDINANTVKDAILRQTAVNKVRITKNSVEII 1522
[86][TOP]
>UniRef100_B6KRB8 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B6KRB8_TOXGO
Length = 1746
Score = 149 bits (377), Expect = 1e-34
Identities = 83/167 (49%), Positives = 110/167 (65%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ R + FL +Y EAG +GA+GA SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1355 VTVRHILEFLRCSWRKYVKAISEAGEAVGAMGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1414
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A I+TPII L D++ N A MVK RIEKT L + IK V
Sbjct: 1415 GVPRIKEIINAAQKIQTPIIVVPLVNDEDYNYAVMVKNRIEKTLLSECCSYIKEVYAPDG 1474
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579
A L + LD+ I + +L+I++NTVK++IL+ K+++ + ++I+
Sbjct: 1475 AWLVVKLDQHTIRKLFLDINANTVKDAILRQTAVNKVRITKNSVEII 1521
[87][TOP]
>UniRef100_B6AIF4 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AIF4_9CRYT
Length = 1803
Score = 149 bits (377), Expect = 1e-34
Identities = 86/167 (51%), Positives = 112/167 (67%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
I+ R L F+ +C +Y ++ G +GAI A SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1386 ITVRHLYEFISLCWLKYMKAIVQPGDAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNVTL 1445
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A+ I TPII A L+ + A+MVKG+I K L +V I+ V + +
Sbjct: 1446 GVPRIKEIINAATKILTPIIQAPLKNPWDYKCAQMVKGKIVKYLLREVCTHIEEVYSPQG 1505
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579
L I L EK I+ YL+I++ TV++SI G KL+LKE +I+I+
Sbjct: 1506 VCLNIYLCEKTIQNLYLDINAYTVRDSIYSHGQICKLRLKEGDIQII 1552
[88][TOP]
>UniRef100_B4JN80 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JN80_DROGR
Length = 1303
Score = 149 bits (376), Expect = 2e-34
Identities = 84/165 (50%), Positives = 111/165 (67%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
+I IS+ QL FL RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 916 QIESISQEQLLEFLRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 975
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+T GVPRI+EIIN +I TPIITA L + ++ AR VK RIEKTTLG+++ +++V
Sbjct: 976 NITQGVPRIVEIINATKSISTPIITAELRNNKSMEFARQVKARIEKTTLGELSSYVELVC 1035
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEI 570
S L I++D I+ L ID +T+ SIL++ +L++K ++
Sbjct: 1036 GPYSCHLVINIDAARIKVLGLYIDLDTIIASILKS-RLRIKPGQV 1079
[89][TOP]
>UniRef100_B3MLS5 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MLS5_DROAN
Length = 1301
Score = 149 bits (375), Expect = 2e-34
Identities = 89/200 (44%), Positives = 121/200 (60%), Gaps = 14/200 (7%)
Frame = +1
Query: 19 ETITEDDPKHLKNLN--------------NFIPRISGISRRQLEVFLDICLSRYRFKKIE 156
E ED KHLK ++ N +I ++ QL FL RY E
Sbjct: 882 EDFKEDVRKHLKTVSKRISLLQEKYDPYGNLCNQIECLTTEQLLEFLRRINDRYNRAVTE 941
Query: 157 AGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAI 336
GT +GAI A SIGEPGTQMTLKTFHFAGVASMN+T GVPRI+EIIN I TPIITA
Sbjct: 942 PGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE 1001
Query: 337 LETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNT 516
L+ + ++ AR VK RIEKTTLG+++ ++VV L I +D I+ L+I+ +T
Sbjct: 1002 LQDNLSMEFARQVKARIEKTTLGELSSYVEVVCGPHCCYLAIGIDMSRIKLLGLHINLDT 1061
Query: 517 VKESILQTGKLKLKEKEIKI 576
+ SIL++ +++LK ++++
Sbjct: 1062 IVASILKS-RMRLKPAQVEV 1080
[90][TOP]
>UniRef100_A7EYX3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
UF-70 RepID=A7EYX3_SCLS1
Length = 1459
Score = 149 bits (375), Expect = 2e-34
Identities = 70/170 (41%), Positives = 114/170 (67%)
Frame = +1
Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246
++ +++ +S+ L+ F ++CL +Y K+E G +GA+GA SIGEPGTQMTLKTFHFAGV
Sbjct: 1053 YVNQVAKVSKTTLKKFCELCLEKYSRAKVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGV 1112
Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426
A MN+T GVPRI EIIN + I TP + L D ++++AR+VK R+EKT L +V +
Sbjct: 1113 AGMNLTAGVPRIKEIINASKTIATPFVKCPLLNDKDLDVARLVKARMEKTYLHEVLHFAE 1172
Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ ++RSA + +++D + + + + + +IL+ KLK+K +++ +
Sbjct: 1173 DMWSARSAVICLAVDTEYLVNRQIEVTVENIATTILKNKKLKVKSEDLNV 1222
[91][TOP]
>UniRef100_B4MT76 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4MT76_DROWI
Length = 1381
Score = 148 bits (374), Expect = 3e-34
Identities = 82/167 (49%), Positives = 112/167 (67%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
+I +S QL +L RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 994 QIEAVSGEQLLEYLRRINERYNRAVSEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 1053
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+T GVPRI+EIIN I TPIITA L + ++ AR VK RIEKTTLG+++ ++VV
Sbjct: 1054 NITQGVPRIVEIINATKTISTPIITAELRNNTSMEYARQVKARIEKTTLGELSSYVEVVC 1113
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ S L I +D I+ L+I+ +T+ SIL++ +L++K ++++
Sbjct: 1114 RAFSCHLVIGIDMARIKVLGLHINLDTIVASILKS-RLRIKPNQVEV 1159
[92][TOP]
>UniRef100_A7AP17 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AP17_BABBO
Length = 1541
Score = 148 bits (374), Expect = 3e-34
Identities = 86/167 (51%), Positives = 107/167 (64%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S RQ+ F+ C Y+ G IGA+GA SIGEPGTQMTLKTFHFAGVASMNVTL
Sbjct: 1174 LSVRQIFEFVRCCWKDYQRAICVPGEAIGALGAQSIGEPGTQMTLKTFHFAGVASMNVTL 1233
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN +S I+TPII L + + A MVK RIEKTTLGQV IK +
Sbjct: 1234 GVPRIKEIINASSTIQTPIIEVPLINNKDFEYALMVKARIEKTTLGQVCSDIKEIFGPTG 1293
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTG---KLKLKEKEIKIL 579
A L ++L+E +I++ L ID+ V+E IL K KL + I ++
Sbjct: 1294 AQLRVTLNENLIKKLLLQIDAFKVREIILDNSVMTKFKLGKHAISVV 1340
[93][TOP]
>UniRef100_C7YT68 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7YT68_NECH7
Length = 1449
Score = 148 bits (374), Expect = 3e-34
Identities = 72/167 (43%), Positives = 108/167 (64%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
R + ++ L +F+ +CL +Y+ +E G +GA+GAHSIGEPGTQMTLKTFHFAGVA M
Sbjct: 1042 RTAKVTLSTLRLFIKMCLDKYKKAHVEPGHAVGAVGAHSIGEPGTQMTLKTFHFAGVAGM 1101
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
++T GVPRI EIIN + I TP+IT LE ++ I AR+VKGRIEKT + V + ++
Sbjct: 1102 SITQGVPRIKEIINASKTISTPVITCPLENNEQIEAARVVKGRIEKTYISDVLRFVEDEW 1161
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + + +D + + +L I + E+I + KLK++ ++ I
Sbjct: 1162 RTNEGNVVLQIDSTALSDMHLGIGPYDIAEAICKQRKLKVQRDDLSI 1208
[94][TOP]
>UniRef100_B3L8U1 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L8U1_PLAKH
Length = 1970
Score = 148 bits (373), Expect = 3e-34
Identities = 80/165 (48%), Positives = 115/165 (69%), Gaps = 2/165 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
++ +QL +F+ +S+Y FK I + G +G+I A SIGEPGTQMTLKTFHFAGVASMN+T
Sbjct: 1424 VNLKQLYLFIFFNVSKY-FKYISSPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMNIT 1482
Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444
LGVPRI EIIN +SNI+TPI+ L+ DN N A M+K ++EKTT+ + IK TSR
Sbjct: 1483 LGVPRIKEIINASSNIQTPILNIPLQVKDNYNFALMMKSKLEKTTIRDICLYIKEDYTSR 1542
Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL-KLKEKEIKI 576
L + +E++I +LNI++ T+K+ I++ + K+K +I +
Sbjct: 1543 GIFLSVKFNEQLIHNLFLNINAYTIKDIIMRQSHINKIKINKIVV 1587
[95][TOP]
>UniRef100_B0EG66 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
RepID=B0EG66_ENTDI
Length = 1379
Score = 148 bits (373), Expect = 3e-34
Identities = 78/166 (46%), Positives = 108/166 (65%)
Frame = +1
Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
+ GI+ + L+ F+ IC + EAGTP+GA+ S+GEP TQM LKTFHFAGVASMN
Sbjct: 1006 LCGITIQTLKEFISICQKKGLRSVCEAGTPVGALAGQSMGEPSTQMVLKTFHFAGVASMN 1065
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
+ LGVPRI EIIN + I+TPI+TA L ++ AR+VKGRIE T L ++AKSIK+V
Sbjct: 1066 IALGVPRIKEIINASKKIQTPIVTAKLVNSQDLTSARIVKGRIEATRLKEIAKSIKIVFK 1125
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
A + + LD + I++ L V++ +L LKLK+ ++ I
Sbjct: 1126 PAEAYISVKLDFETIKQLELECTIEKVQDVLLNYRGLKLKDNQVII 1171
[96][TOP]
>UniRef100_UPI000023CDC4 hypothetical protein FG09860.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023CDC4
Length = 2443
Score = 147 bits (372), Expect = 4e-34
Identities = 71/167 (42%), Positives = 109/167 (65%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
R + ++ L++F+ +CL +Y+ +E G +GA+GAHSIGEPGTQMTLKTFHFAGVA M
Sbjct: 2035 RTAKVTLSTLQLFIKLCLEKYKKAHVEPGHAVGAVGAHSIGEPGTQMTLKTFHFAGVAGM 2094
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
++T GVPRI EIIN + I TP+IT LE ++ I AR+VKGRIEKT + + + ++
Sbjct: 2095 SITQGVPRIKEIINASKAISTPVITCPLENNEQIEAARVVKGRIEKTYISDILRFVEDEW 2154
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + + +D + + +L I + E+I + KLK++ ++ I
Sbjct: 2155 RTTEGNVVLQIDPTALSDMHLGIGPYDIAEAICKQRKLKVQRDDLSI 2201
[97][TOP]
>UniRef100_Q8IE49 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=Q8IE49_PLAF7
Length = 2356
Score = 147 bits (372), Expect = 4e-34
Identities = 81/170 (47%), Positives = 117/170 (68%), Gaps = 4/170 (2%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
S I+ +QL +F+ + +Y FK I G +G+I A SIGEPGTQMTLKTFHFAGVASMN
Sbjct: 1765 SFINLKQLYLFIFFNIYKY-FKYISTPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMN 1823
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
VTLGVPRI EIIN +++I+TPI+ LE +DN N A M+K ++EKTT+ + IK T
Sbjct: 1824 VTLGVPRIKEIINASNSIQTPILNIPLEVNDNYNFALMMKSKLEKTTIRDICMYIKEDYT 1883
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579
SR L + +E++I++ +LNI++ +K+ IL+ K+K+ + I ++
Sbjct: 1884 SRGVFLSVKFNEELIQKLFLNINAYNIKDIILKQSHINKIKINKIHINVI 1933
[98][TOP]
>UniRef100_C4M626 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
RepID=C4M626_ENTHI
Length = 1379
Score = 147 bits (372), Expect = 4e-34
Identities = 79/174 (45%), Positives = 110/174 (63%)
Frame = +1
Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234
N N + GI+ + L+ F+ IC + EAGTP+GA+ S+GEP TQM LKTFH
Sbjct: 998 NQENAQHGLCGITIQTLKDFISICHEKGLRSVCEAGTPVGALAGQSMGEPSTQMVLKTFH 1057
Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414
FAGVASMN+ LGVPRI EIIN + I+TPI+TA L ++ AR+VKGRIE T L ++A
Sbjct: 1058 FAGVASMNIALGVPRIKEIINASKKIQTPIVTAKLVNSQDVTSARIVKGRIEATRLKEIA 1117
Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
KS+K+V A + + LD + I++ L V++ +L LKLK+ ++ I
Sbjct: 1118 KSVKIVFKPAEAYISVKLDFETIKQLELECTIEKVQDVLLNYRGLKLKDNQVII 1171
[99][TOP]
>UniRef100_C5MI79 DNA-directed RNA polymerase (Fragment) n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5MI79_CANTT
Length = 1159
Score = 147 bits (372), Expect = 4e-34
Identities = 81/153 (52%), Positives = 104/153 (67%)
Frame = +1
Query: 31 EDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGT 210
++DP + ++N + IS++ +E FL+ CL +Y K+E GT +GAIGA SIGEPGT
Sbjct: 1011 DEDPAVVNSVNQILK----ISQKTIEKFLEQCLYKYSRAKVEPGTAVGAIGAQSIGEPGT 1066
Query: 211 QMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIE 390
QMTLKTFHFAGVASMNVTLGVPRI EIIN + I TPII ++L D++ AR+ KGRIE
Sbjct: 1067 QMTLKTFHFAGVASMNVTLGVPRIKEIINASKVISTPIINSVLVNDEDEIAARVAKGRIE 1126
Query: 391 KTTLGQVAKSIKVVATSRSAALFISLDEKIIEE 489
KT L VA I+ V L I +D + I+E
Sbjct: 1127 KTLLEDVAFYIEDVYKDNLCYLSIKIDLETIDE 1159
[100][TOP]
>UniRef100_P27625 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Plasmodium
falciparum RepID=RPC1_PLAFA
Length = 2339
Score = 147 bits (372), Expect = 4e-34
Identities = 81/170 (47%), Positives = 117/170 (68%), Gaps = 4/170 (2%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
S I+ +QL +F+ + +Y FK I G +G+I A SIGEPGTQMTLKTFHFAGVASMN
Sbjct: 1754 SFINLKQLYLFIFFNIYKY-FKYISTPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMN 1812
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
VTLGVPRI EIIN +++I+TPI+ LE +DN N A M+K ++EKTT+ + IK T
Sbjct: 1813 VTLGVPRIKEIINASNSIQTPILNIPLEVNDNYNFALMMKSKLEKTTIRDICMYIKEDYT 1872
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQ---TGKLKLKEKEIKIL 579
SR L + +E++I++ +LNI++ +K+ IL+ K+K+ + I ++
Sbjct: 1873 SRGVFLSVKFNEELIQKLFLNINAYNIKDIILKQSHINKIKINKIHINVI 1922
[101][TOP]
>UniRef100_UPI00016E6B7A UPI00016E6B7A related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E6B7A
Length = 1320
Score = 147 bits (371), Expect = 6e-34
Identities = 86/186 (46%), Positives = 117/186 (62%), Gaps = 5/186 (2%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
+PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM
Sbjct: 952 EPKVLYQLDRITPT-------QLERFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1004
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT
Sbjct: 1005 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1064
Query: 397 TLGQVAKSIKVVATSRSAALFISLD-EKI----IEEAYLNIDSNTVKESILQTGKLKLKE 561
LG++++ I+ V + + L E+I +EEA + + +S + LKE
Sbjct: 1065 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEEAVVCVSPRENSKSSMYYVLQSLKE 1124
Query: 562 KEIKIL 579
K++
Sbjct: 1125 DLPKVV 1130
[102][TOP]
>UniRef100_Q4S3H6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4S3H6_TETNG
Length = 1319
Score = 145 bits (367), Expect = 2e-33
Identities = 84/185 (45%), Positives = 115/185 (62%), Gaps = 4/185 (2%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
+PK L L+ P QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQM
Sbjct: 952 EPKVLYQLDRITPT-------QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQM 1004
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVASMN+TLGVPRI EIIN + NI TPIITA L+ +D+ + AR+VKGRIEKT
Sbjct: 1005 TLKTFHFAGVASMNITLGVPRIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKT 1064
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIE----EAYLNIDSNTVKESILQTGKLKLKEK 564
LG++++ I+ V + + L + I EA + + +S + LKE+
Sbjct: 1065 LLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEAVVCVSPRENSKSSMYYVLQSLKEE 1124
Query: 565 EIKIL 579
K++
Sbjct: 1125 LPKVV 1129
[103][TOP]
>UniRef100_B0WFY1 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0WFY1_CULQU
Length = 1303
Score = 145 bits (367), Expect = 2e-33
Identities = 81/159 (50%), Positives = 105/159 (66%)
Frame = +1
Query: 100 QLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPR 279
QL+ FL +Y E GT +GA+ A SIGEPGTQMTLKTFHFAGVASMN+T GVPR
Sbjct: 930 QLKKFLMQVRDKYNKAITEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPR 989
Query: 280 IMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALF 459
I+EIIN I TPIITA + + ++ AR VK RIEKTTLG+++ I+ V S L
Sbjct: 990 IVEIINATKAISTPIITAEIADNTSMEFARKVKARIEKTTLGEISSYIEEVYKSDDCFLL 1049
Query: 460 ISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
I LD I L +++ T++ SI T KLKLK++ +++
Sbjct: 1050 IKLDLDRIRVLGLEVNAETIRYSIC-TSKLKLKQENVEV 1087
[104][TOP]
>UniRef100_B5DTL9 GA22253 (Fragment) n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=B5DTL9_DROPS
Length = 419
Score = 144 bits (364), Expect = 4e-33
Identities = 83/175 (47%), Positives = 112/175 (64%)
Frame = +1
Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231
+ N +I I+ QL F+ RY E GT +GAI A SIGEPGTQMTLKTF
Sbjct: 24 REYGNLCHQIECITAEQLLEFVRRINDRYNRAVSEPGTAVGAIAAQSIGEPGTQMTLKTF 83
Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQV 411
HFAGVASMN+T GVPRI+EIIN I TPIITA L+ + ++ AR VK RIEKTTLG++
Sbjct: 84 HFAGVASMNITQGVPRIVEIINATKTISTPIITAELQENSSMEYARHVKSRIEKTTLGEL 143
Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ I+VV S L + +D I+ L+I+ T+ IL++ +++LK +++I
Sbjct: 144 SSFIEVVCGPYSCHLAMGIDMSRIKVLGLHINLETIVACILKS-RMRLKPAQVEI 197
[105][TOP]
>UniRef100_B4IKC6 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IKC6_DROSE
Length = 1369
Score = 144 bits (364), Expect = 4e-33
Identities = 83/179 (46%), Positives = 114/179 (63%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL
Sbjct: 969 KRYEKCINLCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 1028
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL
Sbjct: 1029 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 1088
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++++
Sbjct: 1089 AELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVEVV 1146
[106][TOP]
>UniRef100_Q2GTS6 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2GTS6_CHAGB
Length = 1290
Score = 144 bits (363), Expect = 5e-33
Identities = 72/163 (44%), Positives = 105/163 (64%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ R++ +S R L F+ +CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA
Sbjct: 981 VNRVAKVSERTLRQFIQMCLHKYKKARVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1040
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
M++T GVPRI EIIN + I TP+I+ LE +I AR+VKGRIEKT + + +
Sbjct: 1041 GMSITQGVPRIKEIINASKTISTPVISCELENRVDIKAARVVKGRIEKTYVSDIISFVDD 1100
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
A + + +D + + + L I + ++I++ KLKLK
Sbjct: 1101 EWLPDVAKIVLQVDLQALSDMQLGISMKDIADAIVRAKKLKLK 1143
[107][TOP]
>UniRef100_B4PX62 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PX62_DROYA
Length = 1383
Score = 143 bits (361), Expect = 8e-33
Identities = 83/177 (46%), Positives = 112/177 (63%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL
Sbjct: 983 KRYEKYINLCHQIECLTAEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 1042
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL
Sbjct: 1043 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 1102
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573
+++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++
Sbjct: 1103 AELSSYVEVVCGPYSCYLAIGIDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVE 1158
[108][TOP]
>UniRef100_B3NXK5 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NXK5_DROER
Length = 1383
Score = 143 bits (361), Expect = 8e-33
Identities = 83/177 (46%), Positives = 112/177 (63%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL
Sbjct: 983 KRYEKYINLCHQIECLTAEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 1042
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL
Sbjct: 1043 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 1102
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573
+++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++
Sbjct: 1103 AELSSYVEVVCGPYSCYLAIGIDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVE 1158
[109][TOP]
>UniRef100_Q7RXJ6 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7RXJ6_NEUCR
Length = 1474
Score = 143 bits (361), Expect = 8e-33
Identities = 74/174 (42%), Positives = 110/174 (63%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
DP+ + + R++ +S L F+++CLS++ K+E G +GA+GA SIGEPGTQM
Sbjct: 1007 DPEEEEIQQAHVDRVAKVSEATLRKFMNLCLSKFDKAKVEPGHAVGAVGAQSIGEPGTQM 1066
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVA M++T GVPRI EII + I TP+I+ LE + +I AR+VKG+IEKT
Sbjct: 1067 TLKTFHFAGVAGMSITQGVPRIKEIIGASKLISTPVISCELENNRDIKAARIVKGKIEKT 1126
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
+ V ++ V A + + +D + + + L I + +I++ KLKLK
Sbjct: 1127 YISDVITYVEDVWLPDVAKIVLKIDMQALSDMQLGIGLREIMVAIVKAKKLKLK 1180
[110][TOP]
>UniRef100_A2QU24 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QU24_ASPNC
Length = 1450
Score = 143 bits (361), Expect = 8e-33
Identities = 75/183 (40%), Positives = 110/183 (60%)
Frame = +1
Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204
I +D + K LN+ ++ R L F+ CL +Y+ ++EAG +GA+GA SIGEP
Sbjct: 1026 IDPNDERSQKGLNH----TGKLTERTLRTFISSCLMKYKKAQVEAGHAVGAVGAQSIGEP 1081
Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384
GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP++ L T DNI AR+VKGR
Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVVACELVTKDNIIAARIVKGR 1141
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
IEKT L + ++ T + A + + ++ K I++ L + + +I + K +
Sbjct: 1142 IEKTYLRDIIHYVRETWTGKEAYITVKINWKTIQDLALELKIENILSAIKNHKRFKADDL 1201
Query: 565 EIK 573
+ +
Sbjct: 1202 KFR 1204
[111][TOP]
>UniRef100_B4R5H7 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
RepID=B4R5H7_DROSI
Length = 723
Score = 143 bits (360), Expect = 1e-32
Identities = 83/177 (46%), Positives = 112/177 (63%)
Frame = +1
Query: 43 KHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTL 222
K + N +I ++ QL F+ RY E GT +GAI A SIGEPGTQMTL
Sbjct: 323 KRYEKCINLCHQIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTL 382
Query: 223 KTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTL 402
KTFHFAGVASMN+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL
Sbjct: 383 KTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTL 442
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573
+++ ++VV S L I +D I+ L+ID +T+ SIL++ ++++K +++
Sbjct: 443 AELSSYVEVVCGPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVE 498
[112][TOP]
>UniRef100_A9UN86 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
melanogaster RepID=A9UN86_DROME
Length = 1410
Score = 143 bits (360), Expect = 1e-32
Identities = 81/168 (48%), Positives = 111/168 (66%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
+I ++ QL F+ RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1021 QIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 1080
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL +++ ++VV
Sbjct: 1081 NITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTLAELSSYVEVVC 1140
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
S L I +D I+ L+ID +T+ SIL++ ++++K +++++
Sbjct: 1141 GPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVEVV 1187
[113][TOP]
>UniRef100_A8JUY3 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A8JUY3_DROME
Length = 1376
Score = 143 bits (360), Expect = 1e-32
Identities = 81/168 (48%), Positives = 111/168 (66%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
+I ++ QL F+ RY E GT +GAI A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 987 QIECLTTEQLLQFVRRINDRYNRAVTEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASM 1046
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+T GVPRI+EIIN I TPIITA LE ++ AR VK RIEKTTL +++ ++VV
Sbjct: 1047 NITQGVPRIVEIINATKTISTPIITAELENCHSMEFARQVKARIEKTTLAELSSYVEVVC 1106
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
S L I +D I+ L+ID +T+ SIL++ ++++K +++++
Sbjct: 1107 GPYSCYLAIGVDMARIKLLGLHIDLDTIVFSILKS-RMRVKPTQVEVV 1153
[114][TOP]
>UniRef100_B8MLB5 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8MLB5_TALSN
Length = 1441
Score = 143 bits (360), Expect = 1e-32
Identities = 74/170 (43%), Positives = 103/170 (60%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ + +S R L F+ CLS+Y KIE G +GA+GA SIGEPGTQMTLKTFHFAGV
Sbjct: 1036 LDHVGKLSERSLRYFIKSCLSKYEKAKIEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVG 1095
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
++ +T GVPRI EIIN + I TP+IT L D ++ AR+ KGRIEKT L + I+
Sbjct: 1096 NLALTQGVPRIKEIINASKEISTPVITCHLAVPDKVHAARIAKGRIEKTFLRDIIHYIRE 1155
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+ + + + L+ IE L + +KE+I+ + K K+ I +L
Sbjct: 1156 SWSDKEGYITVKLNWDTIENLQLELSLPQIKEAIINHRRFKGKDLSIDVL 1205
[115][TOP]
>UniRef100_Q7RQQ6 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RQQ6_PLAYO
Length = 2020
Score = 142 bits (359), Expect = 1e-32
Identities = 82/167 (49%), Positives = 115/167 (68%), Gaps = 2/167 (1%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
S I+ +QL +F+ +S+Y FK I + G +G+I A SIGEPGTQMTLKTFHFAGVASMN
Sbjct: 1450 SFINLKQLYIFIYFNISKY-FKYISSPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMN 1508
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
VTLGVPRI EIIN +S I+TPI+ L DN N A M+K ++EKT++ + + IK
Sbjct: 1509 VTLGVPRIKEIINASSIIQTPILNIPLRIKDNYNFALMMKSKLEKTSIRDICEYIKENYC 1568
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESIL-QTGKLKLKEKEIKI 576
S+ + I +E +I++ +LNI++ T+++ IL QT K+K +I I
Sbjct: 1569 SKGIYISIKFNEDLIQKLFLNINAYTIRDIILKQTHISKIKINKIYI 1615
[116][TOP]
>UniRef100_B7PVV6 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7PVV6_IXOSC
Length = 1394
Score = 142 bits (359), Expect = 1e-32
Identities = 79/168 (47%), Positives = 107/168 (63%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ ++ QL F C +Y +E T +GA+ A SIGEP TQMTLKTFHFAGVASM
Sbjct: 1002 QLDRLTASQLRSFFATCREKYFRAVMEPATAVGAVCAQSIGEPATQMTLKTFHFAGVASM 1061
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+T GVPRI EIIN + NI TPIITA L + + AR VKGRIEKTTLG+V++ ++ V
Sbjct: 1062 NITQGVPRIKEIINASKNISTPIITAALAVNQDAEYARRVKGRIEKTTLGEVSEYLEEVF 1121
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
+ I LD I L ++++TV SI T KL++K + + ++
Sbjct: 1122 LPDECFVLIKLDLDRIRLLQLEVNADTVCYSI-ATSKLRIKGQNLSVV 1168
[117][TOP]
>UniRef100_A5K7T9 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7T9_PLAVI
Length = 1946
Score = 142 bits (359), Expect = 1e-32
Identities = 78/165 (47%), Positives = 114/165 (69%), Gaps = 2/165 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEA-GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
++ +QL +F+ +S+Y FK I A G +G+I A SIGEPGTQMTLKTFHFAGVASMNVT
Sbjct: 1427 VNLKQLYLFIFFNVSKY-FKYISAPGDAVGSISAQSIGEPGTQMTLKTFHFAGVASMNVT 1485
Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444
LGVPRI EIIN +S I+TPI+ L+ D+ N A M+K ++EKTT+ + IK T+R
Sbjct: 1486 LGVPRIKEIINASSTIQTPILNIPLQVKDSYNFALMMKSKLEKTTVRDICLYIKEDYTAR 1545
Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL-KLKEKEIKI 576
L + +E++I +LNI++ T+++ I++ + K+K +I +
Sbjct: 1546 GIFLSVKFNEQLIHNLFLNINAYTIRDIIMRQSHISKIKINKILV 1590
[118][TOP]
>UniRef100_A6SCV1 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SCV1_BOTFB
Length = 1468
Score = 142 bits (359), Expect = 1e-32
Identities = 67/171 (39%), Positives = 111/171 (64%)
Frame = +1
Query: 64 NFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAG 243
+++ +++ +S L+ F ++CL +Y K+E G +GA+GA SIGEPGTQMTLKTFHFAG
Sbjct: 1049 DYVNQVAKVSETTLKKFCELCLEKYSRAKVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAG 1108
Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423
VA MN+T GVPRI EIIN + I TP + L + +AR+VK R+EKT L +V
Sbjct: 1109 VAGMNLTAGVPRIKEIINASKTIATPFVKCPLLNSKELEVARLVKARMEKTYLHEVLHFA 1168
Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + +++SA + +++D + + + + + +IL+ KLK++ +++ +
Sbjct: 1169 EDMWSAKSAIICLAVDTEYLVNRQIEVTVENIAHTILKNKKLKVRSEDLHV 1219
[119][TOP]
>UniRef100_Q0CS43 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CS43_ASPTN
Length = 1450
Score = 142 bits (357), Expect = 2e-32
Identities = 74/183 (40%), Positives = 110/183 (60%)
Frame = +1
Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204
I +D + K LN+ ++ L F++ CL +Y+ ++E G +GA+GA SIGEP
Sbjct: 1026 IDPNDERSQKGLNH----TGKLTETTLRTFINACLMKYKKAQVEPGHAVGAVGAQSIGEP 1081
Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384
GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP++ L T DNI AR+VKGR
Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVVACELVTKDNIIAARIVKGR 1141
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
IEKT L + ++ T + A + + ++ K I++ L + N + +I + K +
Sbjct: 1142 IEKTYLRDIIHYVRETWTGKEAFITVKINWKTIQDLALELKINNILAAIKNHKRFKADDL 1201
Query: 565 EIK 573
+ +
Sbjct: 1202 KFR 1204
[120][TOP]
>UniRef100_B6K857 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6K857_SCHJY
Length = 1406
Score = 142 bits (357), Expect = 2e-32
Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 8/194 (4%)
Frame = +1
Query: 19 ETITEDDPKHLKNLNNFIP--------RISGISRRQLEVFLDICLSRYRFKKIEAGTPIG 174
E +EDD +N ++F P + +S++QL FL C +Y K+E GT +G
Sbjct: 990 ERPSEDDFDDFEN-DDFAPLAARKSVDNVLRVSKKQLYTFLQFCWEKYMKAKVEPGTAVG 1048
Query: 175 AIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDN 354
A+GAHSIGEPGTQMTLKTFHFAGVA+ TLGVPRI EIIN A I TPII L D +
Sbjct: 1049 AVGAHSIGEPGTQMTLKTFHFAGVAA-QTTLGVPRIKEIINAAKTISTPIIYGALVNDQD 1107
Query: 355 INIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534
+ AR+VKGRIEKT L V S++ + + + + ++ I + L++ + +I
Sbjct: 1108 VRSARVVKGRIEKTYLKDVISSLEEIFGPTNTYISVHVNFDTIRKLQLDLTLADIASAIW 1167
Query: 535 QTGKLKLKEKEIKI 576
KLK+ +++ +
Sbjct: 1168 TAPKLKIPMQQVTV 1181
[121][TOP]
>UniRef100_UPI00018665E5 hypothetical protein BRAFLDRAFT_127993 n=1 Tax=Branchiostoma floridae
RepID=UPI00018665E5
Length = 1391
Score = 141 bits (356), Expect = 3e-32
Identities = 85/179 (47%), Positives = 110/179 (61%), Gaps = 12/179 (6%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QL+ FL + +Y KIE GT +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 1003 QLERITPTQLKQFLIMVRDKYLRAKIEPGTAVGAVCAQSIGEPGTQMTLKTFHFAGVASM 1062
Query: 256 NV------------TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTT 399
N+ TLGVPRI EIIN + NI TPIITA LE D + AR VKGRIEK+
Sbjct: 1063 NILLTYLLNHVAHITLGVPRIKEIINASKNISTPIITAQLEDDTSAEFARRVKGRIEKSL 1122
Query: 400 LGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
LG+V + ++ V L I L I+ L + ++T++ SI T KL++K I +
Sbjct: 1123 LGEVTEYMEEVYLPDDCFLLIKLHMDRIKLLKLEVSADTIRYSIC-TSKLRIKPANIVV 1180
[122][TOP]
>UniRef100_Q4N1T2 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N1T2_THEPA
Length = 1617
Score = 141 bits (356), Expect = 3e-32
Identities = 75/157 (47%), Positives = 105/157 (66%)
Frame = +1
Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
++ IS Q+ F+ Y+ E G IGA+G+ SIGEP TQMTLKTFHFAGVASMN
Sbjct: 1252 VNRISLEQMFEFIRYSWKDYQKSLCEPGEAIGALGSQSIGEPATQMTLKTFHFAGVASMN 1311
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
VTLGVPRI EIIN S I TPII LE + + + A VK +IEKTTLGQ+ +IK + T
Sbjct: 1312 VTLGVPRIQEIINATSLIATPIIEVPLEDNTDYDFALKVKSKIEKTTLGQICLNIKQLYT 1371
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549
+ + L +L+ +IE+ ++ ++++ V++ I+ +G L
Sbjct: 1372 PQMSKLLFTLNRDLIEQLHIQVNADKVRDIIIDSGCL 1408
[123][TOP]
>UniRef100_A4QVL1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4QVL1_MAGGR
Length = 970
Score = 141 bits (356), Expect = 3e-32
Identities = 76/183 (41%), Positives = 113/183 (61%)
Frame = +1
Query: 28 TEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPG 207
T DD K + R++ IS L FL +C ++ K E G +GA+GA SIGEPG
Sbjct: 552 TADDSKADMQRVAQVNRVAKISHTTLIKFLKLCQEKHERAKTEPGHAVGAVGAQSIGEPG 611
Query: 208 TQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRI 387
TQMTLKTFHFAGVA M++T GVPRI EIIN + I TP+IT L+ + I AR+VKGRI
Sbjct: 612 TQMTLKTFHFAGVAGMSITQGVPRIKEIINASKLISTPVITCPLQNNKQIEAARVVKGRI 671
Query: 388 EKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567
EKT + V + I+ + + ++ + +D +++ +L I + E+I + KLK++ +
Sbjct: 672 EKTYVSDVLRFIEDEWKADTGSVVLQIDMGALQDMHLGIGLPEIAEAICKYKKLKIEPDD 731
Query: 568 IKI 576
+++
Sbjct: 732 LRL 734
[124][TOP]
>UniRef100_A8PJK8 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PJK8_BRUMA
Length = 1404
Score = 140 bits (354), Expect = 5e-32
Identities = 80/177 (45%), Positives = 107/177 (60%)
Frame = +1
Query: 34 DDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQ 213
+D K+ K R +SR Q F+ +CL ++R E GT +GA+ A SIGEP TQ
Sbjct: 1003 NDCKNQKFFRETEIRSHCLSRAQAVAFIKLCLRKFRRAICEPGTAVGAVAATSIGEPSTQ 1062
Query: 214 MTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEK 393
MTLKTFHFAGVASMN+T GVPRI EIING I TP+ITA L + + +AR VK RIEK
Sbjct: 1063 MTLKTFHFAGVASMNITQGVPRIKEIINGVKLISTPLITAALTNEKDEKLARRVKARIEK 1122
Query: 394 TTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
TTLG++ I+ V + + ++ K + L I +++ +SI T KL + K
Sbjct: 1123 TTLGEICDYIEEVYLPDDCFILLKINAKRVRLLQLEITMSSIAQSIC-TSKLPVPVK 1178
[125][TOP]
>UniRef100_B0XZZ0 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XZZ0_ASPFC
Length = 1453
Score = 139 bits (350), Expect = 2e-31
Identities = 73/183 (39%), Positives = 109/183 (59%)
Frame = +1
Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204
I D + K LN+ ++ + L F+ CL +Y+ ++E G +GA+GA SIGEP
Sbjct: 1026 IDPSDERSQKGLNH----TGKLTEKTLRTFITSCLMKYKKAQVEPGHAVGAVGAQSIGEP 1081
Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384
GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L T DN+ AR+VKGR
Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVISCDLVTKDNVIAARIVKGR 1141
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
IEKT L + ++ T + A L + ++ + I+ L + + ++I + K +
Sbjct: 1142 IEKTYLRDIIHYVREAWTGKEAYLTVKINWETIQNLALELKIRNIVDAIKNHKRFKADDL 1201
Query: 565 EIK 573
+ +
Sbjct: 1202 KFR 1204
[126][TOP]
>UniRef100_A1D5Y9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D5Y9_NEOFI
Length = 1453
Score = 139 bits (350), Expect = 2e-31
Identities = 73/183 (39%), Positives = 109/183 (59%)
Frame = +1
Query: 25 ITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEP 204
I D + K LN+ ++ + L F+ CL +Y+ ++E G +GA+GA SIGEP
Sbjct: 1026 IDPSDERSQKGLNH----TGKLTEKTLRTFITSCLMKYKKAQVEPGHAVGAVGAQSIGEP 1081
Query: 205 GTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGR 384
GTQMTLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L T DN+ AR+VKGR
Sbjct: 1082 GTQMTLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVISCDLVTKDNVIAARIVKGR 1141
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
IEKT L + ++ T + A L + ++ + I+ L + + ++I + K +
Sbjct: 1142 IEKTYLRDIIHYVREAWTGKEAYLTVKINWETIQNLALELKIRNIVDAIKNHKRFKADDL 1201
Query: 565 EIK 573
+ +
Sbjct: 1202 KFR 1204
[127][TOP]
>UniRef100_O94666 DNA-directed RNA polymerase III subunit rpc1 n=1
Tax=Schizosaccharomyces pombe RepID=RPC1_SCHPO
Length = 1405
Score = 139 bits (350), Expect = 2e-31
Identities = 80/169 (47%), Positives = 104/169 (61%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ I ++ +QL F+D C +Y K+E GT +GAIGA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1014 VENIIRVTEKQLRSFVDRCWEKYMRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVA 1073
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
+ TLGVPRI EIIN A I TPIIT L D + AR+VKGRIEKT L V I+
Sbjct: 1074 A-QTTLGVPRIKEIINAAKTISTPIITGQLINDRDERSARVVKGRIEKTYLKDVTSYIEE 1132
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
V + L I ++ I + L+I + +I T KLK+ +++ +
Sbjct: 1133 VYGPVTTYLSIQVNFDTISKLQLDITLADIAAAIWNTPKLKIPSQQVTV 1181
[128][TOP]
>UniRef100_Q4U940 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4U940_THEAN
Length = 1648
Score = 138 bits (348), Expect = 3e-31
Identities = 75/145 (51%), Positives = 96/145 (66%)
Frame = +1
Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
++ IS Q+ F+ Y+ E G IGA+G+ SIGEP TQMTLKTFHFAGVASMN
Sbjct: 1269 VNRISLEQMFEFIRYSWKDYQKSLCEPGEAIGALGSQSIGEPATQMTLKTFHFAGVASMN 1328
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
VTLGVPRI EIIN S I TPII LE + A VK +IEKTTLGQ+ +IK + T
Sbjct: 1329 VTLGVPRIQEIINATSLIATPIIEVPLEDKTSYEFALKVKSKIEKTTLGQICLNIKQLYT 1388
Query: 439 SRSAALFISLDEKIIEEAYLNIDSN 513
+++ L +L+ +IE+ +L I+SN
Sbjct: 1389 PQNSKLLFTLNRNLIEQLHLEINSN 1413
[129][TOP]
>UniRef100_B2ADZ3 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2ADZ3_PODAN
Length = 1521
Score = 138 bits (348), Expect = 3e-31
Identities = 70/158 (44%), Positives = 103/158 (65%), Gaps = 1/158 (0%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S L F+++CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1093 VSEASLRKFIELCLEKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1152
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+IT +LE +++ AR VK RIEKT + + + V
Sbjct: 1153 GVPRIKEIINASKTISTPVITCVLENTKDVSAARAVKHRIEKTYIKDILDYVDDVWLQDV 1212
Query: 448 AALFISLDEKIIEE-AYLNIDSNTVKESILQTGKLKLK 558
A + + L++ +E + I + + ++I++ KLKLK
Sbjct: 1213 AKIVLRLEKDGLENLEQIGITTTDIADAIVKAKKLKLK 1250
[130][TOP]
>UniRef100_Q2U3T5 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
RepID=Q2U3T5_ASPOR
Length = 1447
Score = 138 bits (347), Expect = 4e-31
Identities = 67/155 (43%), Positives = 99/155 (63%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ + L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1043 LTEKTLRTFISACLMKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1102
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+++ L T DN+ AR+VKGRIEKT L + ++ T +
Sbjct: 1103 GVPRIKEIINASKEISTPVVSCELVTKDNVIAARIVKGRIEKTYLRDITHYVRETWTGKE 1162
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + + ++ K I++ L + + +I + K
Sbjct: 1163 AYITVKINWKTIQDLALELKIQDILAAIKNHRRFK 1197
[131][TOP]
>UniRef100_B8NTG3 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8NTG3_ASPFN
Length = 1436
Score = 138 bits (347), Expect = 4e-31
Identities = 67/155 (43%), Positives = 99/155 (63%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ + L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1043 LTEKTLRTFISACLMKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1102
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+++ L T DN+ AR+VKGRIEKT L + ++ T +
Sbjct: 1103 GVPRIKEIINASKEISTPVVSCELVTKDNVIAARIVKGRIEKTYLRDITHYVRETWTGKE 1162
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + + ++ K I++ L + + +I + K
Sbjct: 1163 AYITVKINWKTIQDLALELKIQDILAAIKNHRRFK 1197
[132][TOP]
>UniRef100_Q0V3B7 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V3B7_PHANO
Length = 1473
Score = 136 bits (343), Expect = 1e-30
Identities = 70/166 (42%), Positives = 106/166 (63%)
Frame = +1
Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
I+ IS+ L+ F+D+CL++Y +++ G +GAIGA SIGEPGTQMTLKTFHFAGVA M+
Sbjct: 1073 IAKISQTALDTFIDLCLTKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMS 1132
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
+T GVPRI EIIN +S I TP+IT +L + + AR+VK R+EKT L + ++ V
Sbjct: 1133 ITQGVPRIKEIINASSTISTPVITCVLSNKISESAARIVKARVEKTYLRDIINYVEDVWH 1192
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
A + + +D + +++I + + +I + LK + K+
Sbjct: 1193 PTGAYVAMRIDWDTVNALFVDITPHEIVNAINKHKPLKWGKAGTKV 1238
[133][TOP]
>UniRef100_C9SQ00 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SQ00_9PEZI
Length = 1456
Score = 136 bits (343), Expect = 1e-30
Identities = 69/170 (40%), Positives = 106/170 (62%)
Frame = +1
Query: 67 FIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGV 246
+ R++ +S L++F+ +CL +Y+ +E G +GA+GA SIGEPGTQMTLKTFHFAGV
Sbjct: 1048 YADRVAKVSENTLKLFIKLCLEKYKKAHVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGV 1107
Query: 247 ASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIK 426
A M++T GVPRI EIIN + I TP+I L + + AR+VK RIEKT + + I+
Sbjct: 1108 AGMSITQGVPRIKEIINASKLISTPVIKCPLVQNKEMRAARIVKARIEKTYVSDILSYIE 1167
Query: 427 VVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + + + +D + + L I + V E+I + KLK++ ++ I
Sbjct: 1168 DEWMANAGNVVLQIDMDALSDMQLGIGIHDVAEAICRHRKLKVQRGDLHI 1217
[134][TOP]
>UniRef100_B2VYJ3 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2VYJ3_PYRTR
Length = 1471
Score = 136 bits (343), Expect = 1e-30
Identities = 72/158 (45%), Positives = 102/158 (64%)
Frame = +1
Query: 79 ISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 258
I+ ISR L+ F+ +C S+Y +++ G +GAIGA SIGEPGTQMTLKTFHFAGVA M+
Sbjct: 1072 IAKISRSALDTFIALCWSKYHRSRVQPGHAVGAIGAQSIGEPGTQMTLKTFHFAGVAGMS 1131
Query: 259 VTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
+T GVPRI EIIN +S I TP+I LE + +AR VK RIEKT L V + ++ V
Sbjct: 1132 ITQGVPRIKEIINASSTISTPVIDCELENKVSERVAREVKARIEKTYLRDVIRYVEDVWY 1191
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + + +D I++ ++++ + +K +I LK
Sbjct: 1192 PEGAYVAMRIDWDTIQKLFIDVKPHEIKAAISAHKPLK 1229
[135][TOP]
>UniRef100_C8VPJ2 Putative uncharacterized protein n=2 Tax=Emericella nidulans
RepID=C8VPJ2_EMENI
Length = 1445
Score = 135 bits (340), Expect = 2e-30
Identities = 72/179 (40%), Positives = 108/179 (60%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
D + +K LN+ ++ R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQM
Sbjct: 1030 DERTIKGLNH----TGKLTERTLRTFIAECLMKYKKAQVEPGHAVGAVGAQSIGEPGTQM 1085
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L NI ARM KGRIEKT
Sbjct: 1086 TLKTFHFAGVAGMSITQGVPRIKEIINASKEISTPVISCELVEKRNIVAARMAKGRIEKT 1145
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573
L + ++ T + A L + ++ I L++ ++++I + K ++ +++
Sbjct: 1146 FLRDIIHYVRETWTGKEAYLTVKINWDTISALELDLTVGKIRQAIENHRRFKSEDLKLR 1204
[136][TOP]
>UniRef100_A1CLD8 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CLD8_ASPCL
Length = 1449
Score = 135 bits (339), Expect = 3e-30
Identities = 71/179 (39%), Positives = 108/179 (60%)
Frame = +1
Query: 37 DPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQM 216
D + K LN+ ++ + L F+ CL +Y+ ++E G +GA+GA SIGEPGTQM
Sbjct: 1030 DERSQKGLNH----TGKLTEKTLRTFIAACLLKYKRAQVEPGHAVGAVGAQSIGEPGTQM 1085
Query: 217 TLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKT 396
TLKTFHFAGVA M++T GVPRI EIIN + I TP+I+ L T DN+ AR+VKGRIEKT
Sbjct: 1086 TLKTFHFAGVAGMSITQGVPRIKEIINASKAISTPVISCDLVTKDNVIAARIVKGRIEKT 1145
Query: 397 TLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIK 573
L + ++ T + A + + ++ + I+ L + + + +I + K + + +
Sbjct: 1146 FLRDIIHYVRETWTGKEAYITVKINWETIQNLALELKIHHIVAAIKNHKRFKADDLKFR 1204
[137][TOP]
>UniRef100_C5LQF1 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LQF1_9ALVE
Length = 1133
Score = 132 bits (331), Expect = 3e-29
Identities = 72/154 (46%), Positives = 94/154 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ QL F+ C +YR +E G +GA A SIGEP TQMTLKTFHFAGVASMNVTL
Sbjct: 719 LTEAQLRSFMTTCARKYRRALMEPGEAVGATSAQSIGEPATQMTLKTFHFAGVASMNVTL 778
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A +I TPII+ LE D A MVK +I++T LG + + IK V
Sbjct: 779 GVPRIKEIINAAKHISTPIISCKLEQDRVEAAAFMVKSKIQRTLLGDICEYIKQVYEPSG 838
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549
L + L + + L++ + +KE++ G L
Sbjct: 839 VYLIVKLCGETLRRMQLDLTMDELKEALCAKGAL 872
[138][TOP]
>UniRef100_C5KZ53 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5KZ53_9ALVE
Length = 1719
Score = 132 bits (331), Expect = 3e-29
Identities = 72/154 (46%), Positives = 94/154 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ QL F+ C +YR +E G +GA A SIGEP TQMTLKTFHFAGVASMNVTL
Sbjct: 990 LTEAQLRSFMTTCARKYRRALMEPGEAVGATSAQSIGEPATQMTLKTFHFAGVASMNVTL 1049
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN A +I TPII+ LE D A MVK +I++T LG + + IK V
Sbjct: 1050 GVPRIKEIINAAKHISTPIISCKLEQDRVEAAAFMVKSKIQRTLLGDICEYIKQVYEPSG 1109
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549
L + L + + L++ + +KE++ G L
Sbjct: 1110 VYLIVKLCGETLRRMQLDLTMDELKEALCAKGAL 1143
[139][TOP]
>UniRef100_Q1DVM7 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1DVM7_COCIM
Length = 1430
Score = 132 bits (331), Expect = 3e-29
Identities = 67/148 (45%), Positives = 95/148 (64%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1041 LSAKTLTTFITSCLTKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1100
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TPIIT L +++ A++VKGR+EKT + + I+ TS
Sbjct: 1101 GVPRIKEIINASKEISTPIITCELVNKEDVRAAQIVKGRVEKTFIKDIIYYIEEAWTSSV 1160
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESI 531
A + I +D I+ L + + +I
Sbjct: 1161 AYINIKIDFSTIQALQLELTLRDILNAI 1188
[140][TOP]
>UniRef100_B6QI35 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QI35_PENMQ
Length = 1439
Score = 132 bits (331), Expect = 3e-29
Identities = 69/170 (40%), Positives = 98/170 (57%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
+ + +S L F+ CL +Y KIE G +GA+GA SIGEPGTQMTLKTFHFAGV
Sbjct: 1035 LDHVGKLSEGSLRYFIKSCLFKYEKAKIEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVG 1094
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
++ +T GVPRI EIIN + I TP+IT L ++ AR+ KGRIEKT L + I+
Sbjct: 1095 NLALTQGVPRIKEIINASKEISTPVITCHLAIPHELHAARIAKGRIEKTFLRDIIHYIRE 1154
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
T + + + L+ IE L + +K++I + K + + +L
Sbjct: 1155 SWTDKEGYITVKLNWDTIENLQLELSLRQIKDAITSHRRFKGSDLTVDVL 1204
[141][TOP]
>UniRef100_B6H2R1 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H2R1_PENCW
Length = 1448
Score = 132 bits (331), Expect = 3e-29
Identities = 72/155 (46%), Positives = 96/155 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1043 LTETTLRAFITACLLKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1102
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP++ L + AR+VKGRIEKT L V SI V +
Sbjct: 1103 GVPRIKEIINASREISTPVVACELVNRGSTIAARIVKGRIEKTFLQDVIHSITEVWSPDD 1162
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A L + L+ K IE+ L I + + E+I + K
Sbjct: 1163 AYLKVVLNWKTIEDLALEITTPQIVEAIKTNKRFK 1197
[142][TOP]
>UniRef100_Q18566 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
RepID=Q18566_CAEEL
Length = 1400
Score = 130 bits (328), Expect = 6e-29
Identities = 78/179 (43%), Positives = 105/179 (58%), Gaps = 3/179 (1%)
Frame = +1
Query: 4 NTKLTETITEDDPKHLKNLNNFIPRI---SGISRRQLEVFLDICLSRYRFKKIEAGTPIG 174
N + + T++ K KNL + + S +++ QL F+++C + E GT +G
Sbjct: 988 NHETADLKTKESCKICKNLEAYKTSLLANSCLTKTQLCSFIELCYYKVARAITEPGTAVG 1047
Query: 175 AIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDN 354
AI A SIGEP TQMTLKTFHFAGVASMN+T GVPRI EIIN I TPIITA L +
Sbjct: 1048 AIAATSIGEPSTQMTLKTFHFAGVASMNITQGVPRIKEIINAVKTISTPIITAALLDPYD 1107
Query: 355 INIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESI 531
++AR VK RIEKTTLG++ I+ V L + L+ K I L + ++ +I
Sbjct: 1108 ESLARRVKARIEKTTLGEICDYIEEVYLPDDYFLLVKLNSKRIRLLQLEVCMESISYAI 1166
[143][TOP]
>UniRef100_C5PCH6 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PCH6_COCP7
Length = 1444
Score = 130 bits (327), Expect = 7e-29
Identities = 66/148 (44%), Positives = 94/148 (63%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1041 LSAKTLTTFITSCLTKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1100
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TPIIT L +++ A++VKGR+EKT + + I+ T
Sbjct: 1101 GVPRIKEIINASKEISTPIITCELVNKEDVRAAQIVKGRVEKTFIKDIIYYIEEAWTGSV 1160
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESI 531
A + I +D I+ L + + +I
Sbjct: 1161 AYINIKIDFSTIQALQLELTLRDILNAI 1188
[144][TOP]
>UniRef100_C1GX38 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1GX38_PARBA
Length = 1425
Score = 130 bits (327), Expect = 7e-29
Identities = 69/155 (44%), Positives = 95/155 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
IS R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1008 ISARTLAAFITSCLVKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1067
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + V I+ T
Sbjct: 1068 GVPRIKEIINASKEISTPVITCQLVNKGDLRAAQIVKGRVEKTFMRDVIYYIEEDWTGND 1127
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + I +D I+ L + + +I + + K
Sbjct: 1128 AYINIKIDFSTIQNLQLELGLQDILAAIKKHKRFK 1162
[145][TOP]
>UniRef100_C1GGI7 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GGI7_PARBD
Length = 1458
Score = 130 bits (327), Expect = 7e-29
Identities = 68/155 (43%), Positives = 95/155 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
IS R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1041 ISARTLAAFITSCLVKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1100
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T
Sbjct: 1101 GVPRIKEIINASKEISTPVITCQLVNKGDLRAAQIVKGRVEKTFMRDIIYYIEEDWTGND 1160
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + I +D I+ L + + +I + + K
Sbjct: 1161 AYINIKIDFSTIQNLQLELGLQDILSAIKKHKRFK 1195
[146][TOP]
>UniRef100_C0SHD3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SHD3_PARBP
Length = 1449
Score = 130 bits (327), Expect = 7e-29
Identities = 68/155 (43%), Positives = 95/155 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
IS R L F+ CL +Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1032 ISARTLAAFITSCLVKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1091
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T
Sbjct: 1092 GVPRIKEIINASKEISTPVITCQLVNKGDLRAAQIVKGRVEKTFMRDIIYYIEEDWTGND 1151
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + I +D I+ L + + +I + + K
Sbjct: 1152 AYINIKIDFSTIQNLQLELGLQDILSAIKKHKRFK 1186
[147][TOP]
>UniRef100_C6HPI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HPI8_AJECH
Length = 1333
Score = 130 bits (326), Expect = 1e-28
Identities = 67/155 (43%), Positives = 96/155 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S R L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 915 VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 974
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T
Sbjct: 975 GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE 1034
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + I +D I+ L + + +I + + K
Sbjct: 1035 AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFK 1069
[148][TOP]
>UniRef100_C5GRI8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GRI8_AJEDR
Length = 1456
Score = 130 bits (326), Expect = 1e-28
Identities = 67/161 (41%), Positives = 99/161 (61%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
I + +S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1032 IDHTAKVSTKALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1091
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
M++T GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+
Sbjct: 1092 GMSITQGVPRIKEIINASKEISTPVITCELVNKHDLRAAQIVKGRVEKTFIRDIIYYIEE 1151
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
T A + I +D I+ L ++ + +I + + K
Sbjct: 1152 DWTGNEAYINIKIDFSTIQNLQLELNLQDILVAIKKHKRFK 1192
[149][TOP]
>UniRef100_C4JWU1 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JWU1_UNCRE
Length = 1435
Score = 130 bits (326), Expect = 1e-28
Identities = 67/154 (43%), Positives = 96/154 (62%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
I + +S + L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1035 ISHTAKLSAKTLTAFVTSCLTKYKKAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1094
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
M++T GVPRI EIIN + I TPIIT L +++ A++VKGR+EKT + + I+
Sbjct: 1095 GMSITQGVPRIKEIINASKEISTPIITCELVNKEDLRAAQIVKGRVEKTFIKDIIYYIEE 1154
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESI 531
T A + I +D I+ L + + +I
Sbjct: 1155 AWTGSVAYINIKIDFSAIQALQLELTLRDILNAI 1188
[150][TOP]
>UniRef100_C0NZL8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NZL8_AJECG
Length = 1456
Score = 130 bits (326), Expect = 1e-28
Identities = 67/155 (43%), Positives = 96/155 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S R L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1038 VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1097
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T
Sbjct: 1098 GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE 1157
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + I +D I+ L + + +I + + K
Sbjct: 1158 AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFK 1192
[151][TOP]
>UniRef100_A6RGX8 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6RGX8_AJECN
Length = 1439
Score = 130 bits (326), Expect = 1e-28
Identities = 67/155 (43%), Positives = 96/155 (61%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S R L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1021 VSTRALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1080
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+ T
Sbjct: 1081 GVPRIKEIINASKEISTPVITCELVNKQDLRAAQIVKGRVEKTFVRDIIYYIEEDWTGNE 1140
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
A + I +D I+ L + + +I + + K
Sbjct: 1141 AYINIKIDFSTIQNLQLELTLQDILMAIKKHKRFK 1175
[152][TOP]
>UniRef100_UPI000022105F Hypothetical protein CBG05787 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI000022105F
Length = 1402
Score = 129 bits (325), Expect = 1e-28
Identities = 73/151 (48%), Positives = 93/151 (61%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261
S ++R QL F+ +C + E GT +GAI A SIGEP TQMTLKTFHFAGVASMN+
Sbjct: 1017 SCLTRSQLLSFIQLCYYKIARAITEPGTAVGAIAATSIGEPSTQMTLKTFHFAGVASMNI 1076
Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
T GVPRI EIIN I TPIITA L + ++AR VK RIEKTTLG++ I+ V
Sbjct: 1077 TQGVPRIKEIINAVKTISTPIITASLLDPYDESLARRVKARIEKTTLGEICDYIEEVYLP 1136
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESIL 534
L + L+ K I L + ++ +I+
Sbjct: 1137 DDYFLLVKLNSKRIRLLQLEVSLESISYAIV 1167
[153][TOP]
>UniRef100_A8X1M6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae
RepID=A8X1M6_CAEBR
Length = 1435
Score = 129 bits (325), Expect = 1e-28
Identities = 73/151 (48%), Positives = 93/151 (61%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261
S ++R QL F+ +C + E GT +GAI A SIGEP TQMTLKTFHFAGVASMN+
Sbjct: 1034 SCLTRSQLLSFIQLCYYKIARAITEPGTAVGAIAATSIGEPSTQMTLKTFHFAGVASMNI 1093
Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
T GVPRI EIIN I TPIITA L + ++AR VK RIEKTTLG++ I+ V
Sbjct: 1094 TQGVPRIKEIINAVKTISTPIITASLLDPYDESLARRVKARIEKTTLGEICDYIEEVYLP 1153
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESIL 534
L + L+ K I L + ++ +I+
Sbjct: 1154 DDYFLLVKLNSKRIRLLQLEVSLESISYAIV 1184
[154][TOP]
>UniRef100_C5JRK1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081
RepID=C5JRK1_AJEDS
Length = 1456
Score = 129 bits (324), Expect = 2e-28
Identities = 67/161 (41%), Positives = 98/161 (60%)
Frame = +1
Query: 70 IPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVA 249
I + +S L F+ CL++Y+ ++E G +GA+GA SIGEPGTQMTLKTFHFAGVA
Sbjct: 1032 IDHTAKVSTNALTSFITACLTKYKRAQVEPGHAVGAVGAQSIGEPGTQMTLKTFHFAGVA 1091
Query: 250 SMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
M++T GVPRI EIIN + I TP+IT L ++ A++VKGR+EKT + + I+
Sbjct: 1092 GMSITQGVPRIKEIINASKEISTPVITCELVNKHDLRAAQIVKGRVEKTFIRDIIYYIEE 1151
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
T A + I +D I+ L ++ + +I + + K
Sbjct: 1152 DWTGNEAYINIKIDFSTIQNLQLELNLQDILVAIKKHKRFK 1192
[155][TOP]
>UniRef100_C5FEK3 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FEK3_NANOT
Length = 1443
Score = 128 bits (322), Expect = 3e-28
Identities = 68/139 (48%), Positives = 89/139 (64%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S R L+ F+ CL +Y +E G IGAIGA SIGEPGTQMTLKTFHFAGVA M++T
Sbjct: 1036 LSARTLKAFIASCLDKYMRAHVEPGHSIGAIGAQSIGEPGTQMTLKTFHFAGVAGMSITQ 1095
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPRI EIIN + I TPIIT L ++ A +VKGRIEK L + I+ + + +
Sbjct: 1096 GVPRIKEIINASKEISTPIITCELTNKTDMRAAEIVKGRIEKLFLKDIVYYIEEIRSEST 1155
Query: 448 AALFISLDEKIIEEAYLNI 504
+ + I +D I++ L I
Sbjct: 1156 SFIKIKVDFSTIDKLQLEI 1174
[156][TOP]
>UniRef100_D0A1W8 DNA-directed RNA polymerase iii largest subunit (Rna polymerase iii
largest subunit, putative) n=1 Tax=Trypanosoma brucei
gambiense DAL972 RepID=D0A1W8_TRYBG
Length = 1530
Score = 125 bits (314), Expect = 2e-27
Identities = 72/183 (39%), Positives = 109/183 (59%), Gaps = 8/183 (4%)
Frame = +1
Query: 10 KLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAH 189
K+ ++ E L++L + ++R + F+ C S+Y K E GTP GAI A
Sbjct: 1092 KVKDSKEEGRVSELRDLEMLQTELLPLTRGMVTRFIAQCASKYLRKACEPGTPCGAIAAQ 1151
Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA---ILETDDN-- 354
S+GEP TQMTL+TFHFAGVASM++T GVPR++E+IN NI TP++TA ++E ++N
Sbjct: 1152 SVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEVINANRNIATPVVTAPVLLMEGEENHC 1211
Query: 355 ---INIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKE 525
AR VK +IE+ L +V I V + L + L+ +I + +L I++ TV++
Sbjct: 1212 EIFRKRARFVKAQIERVLLREVVSEIVEVCSDTEFYLRVHLNMSVITKLHLPINAITVRQ 1271
Query: 526 SIL 534
IL
Sbjct: 1272 RIL 1274
[157][TOP]
>UniRef100_Q38BW7 DNA-directed RNA polymerase n=1 Tax=Trypanosoma brucei
RepID=Q38BW7_9TRYP
Length = 1530
Score = 124 bits (310), Expect = 7e-27
Identities = 70/170 (41%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Frame = +1
Query: 49 LKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKT 228
L++L + ++R + F+ C S+Y K E GTP GAI A S+GEP TQMTL+T
Sbjct: 1105 LRDLEMLQTELLPLTRGMVTRFIAQCASKYLRKACEPGTPCGAIAAQSVGEPSTQMTLRT 1164
Query: 229 FHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA---ILETDDN-----INIARMVKGR 384
FHFAGVASM++T GVPR++E+IN NI TP++TA ++E ++N AR VK +
Sbjct: 1165 FHFAGVASMSITQGVPRLVEVINANRNIATPVVTAPVLLMEGEENHCEIFRKRARFVKAQ 1224
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534
IE+ L +V I V + L + L+ +I + +L I++ TV++ IL
Sbjct: 1225 IERVLLREVVSEIVEVCSDTEFYLRVHLNMSVITKLHLPINAITVRQRIL 1274
[158][TOP]
>UniRef100_P08968 DNA-directed RNA polymerase III subunit RPC1 n=1 Tax=Trypanosoma
brucei brucei RepID=RPC1_TRYBB
Length = 1530
Score = 124 bits (310), Expect = 7e-27
Identities = 70/170 (41%), Positives = 104/170 (61%), Gaps = 8/170 (4%)
Frame = +1
Query: 49 LKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKT 228
L++L + ++R + F+ C S+Y K E GTP GAI A S+GEP TQMTL+T
Sbjct: 1105 LRDLEMLQTELLPLTRGMVTRFIAQCASKYLRKACEPGTPCGAIAAQSVGEPSTQMTLRT 1164
Query: 229 FHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA---ILETDDN-----INIARMVKGR 384
FHFAGVASM++T GVPR++E+IN NI TP++TA ++E ++N AR VK +
Sbjct: 1165 FHFAGVASMSITQGVPRLVEVINANRNIATPVVTAPVLLMEGEENHCEIFRKRARFVKAQ 1224
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534
IE+ L +V I V + L + L+ +I + +L I++ TV++ IL
Sbjct: 1225 IERVLLREVVSEIVEVCSDTEFYLRVHLNMSVITKLHLPINAITVRQRIL 1274
[159][TOP]
>UniRef100_C4V991 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4V991_NOSCE
Length = 1335
Score = 123 bits (308), Expect = 1e-26
Identities = 65/155 (41%), Positives = 94/155 (60%)
Frame = +1
Query: 91 SRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLG 270
+R +F D+ + + IE GT +GAI SIGEPGTQMTLKTFHFAGVASMN+TLG
Sbjct: 985 TREFFNLFFDLIKQKIKNCLIEPGTAVGAIAGQSIGEPGTQMTLKTFHFAGVASMNITLG 1044
Query: 271 VPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSA 450
VPR++EIIN NI TPII L+ +D +N A++VKGR+ K + +
Sbjct: 1045 VPRLIEIINAVVNINTPIINVSLDKNDLLN-AQIVKGRVLKVLFKDICNHVTDSVCKDGI 1103
Query: 451 ALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKL 555
+ +D +I + L ID ++K+++ T ++ +
Sbjct: 1104 FIDFKIDLNLINKLRLQIDMKSIKQNLNITEQITI 1138
[160][TOP]
>UniRef100_C4QF52 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
RepID=C4QF52_SCHMA
Length = 1342
Score = 122 bits (307), Expect = 2e-26
Identities = 73/166 (43%), Positives = 99/166 (59%)
Frame = +1
Query: 55 NLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFH 234
N +N I + ++R QL +FL +Y IE GT +GA+ S+GEP TQMTLKTFH
Sbjct: 1004 NGSNLINQNERLTRTQLRIFLTHVKEKYEKALIEPGTAVGALCGQSVGEPATQMTLKTFH 1063
Query: 235 FAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVA 414
FAGVASMN+T GVPR+ EI+N A+ IKTP+I L + ++AR VK IE T L ++
Sbjct: 1064 FAGVASMNITQGVPRMREIVNAAARIKTPLICVTLTDPFSASLARQVKLSIEPTRLADIS 1123
Query: 415 KSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
S+ T + I LD+K ++ I + V +I QT KLK
Sbjct: 1124 LSLSQCLTPEYVYVAIKLDKKRMDRR--GITTPQVATAI-QTTKLK 1166
[161][TOP]
>UniRef100_Q8SRM3 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
RepID=Q8SRM3_ENCCU
Length = 1349
Score = 121 bits (304), Expect = 3e-26
Identities = 63/146 (43%), Positives = 91/146 (62%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S+ +E F + + +E GT +GAI SIGEPGTQMTLKTFHFAGVASMN+TL
Sbjct: 998 LSKDFIETFFSMVSQKMMNLIVEPGTTVGAIAGQSIGEPGTQMTLKTFHFAGVASMNITL 1057
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRS 447
GVPR+ EIIN NI TPII A L+ ++ ++KGR+++ +L V S+ V +
Sbjct: 1058 GVPRLKEIINAVCNISTPIINAELDDPHDLFRTEVIKGRLDRISLKDVCSSLTEVISKDE 1117
Query: 448 AALFISLDEKIIEEAYLNIDSNTVKE 525
L I +D + + LN+D + +++
Sbjct: 1118 IFLDIRVDLESLSRLKLNLDIHKIEK 1143
[162][TOP]
>UniRef100_A8IFE0 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IFE0_CHLRE
Length = 1167
Score = 119 bits (299), Expect = 1e-25
Identities = 61/82 (74%), Positives = 69/82 (84%), Gaps = 1/82 (1%)
Frame = +1
Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAI-LETDDNINIA 366
SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN A I TPII + L D+++ A
Sbjct: 829 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAARTISTPIIKVVALAVDNDVKAA 888
Query: 367 RMVKGRIEKTTLGQVAKSIKVV 432
R+VKGR+EKTTLGQVA+ IK+V
Sbjct: 889 RLVKGRLEKTTLGQVARHIKIV 910
[163][TOP]
>UniRef100_Q4DZA9 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
RepID=Q4DZA9_TRYCR
Length = 1553
Score = 117 bits (293), Expect = 6e-25
Identities = 70/164 (42%), Positives = 93/164 (56%), Gaps = 23/164 (14%)
Frame = +1
Query: 112 FLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEI 291
FL C S+Y K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T GVPR++EI
Sbjct: 1132 FLAQCASKYILKACEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEI 1191
Query: 292 INGASNIKTPIITAIL--------------------ETDDNINI---ARMVKGRIEKTTL 402
IN NI TP++TA + E D R VK ++E+ L
Sbjct: 1192 INANRNIATPVVTAPVRRHRRGKSLSIKQEVVGESCEEDSQEEFEKRVRRVKSQVERVLL 1251
Query: 403 GQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL 534
+VA I V TS L + L+ +I + +L I++ TV++ IL
Sbjct: 1252 KEVASEIVEVCTSTEFYLRVHLNMSLIAKLWLPINAITVRQRIL 1295
[164][TOP]
>UniRef100_Q22M85 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
RepID=Q22M85_TETTH
Length = 1418
Score = 116 bits (290), Expect = 1e-24
Identities = 68/165 (41%), Positives = 102/165 (61%), Gaps = 4/165 (2%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
I++RQ+ F RY +E G +GA+GA SI EP TQMTLK+FHFAGVASMN+T
Sbjct: 1020 ITKRQINYFFKTLWERYPQMLVEPGEAVGAVGATSISEPATQMTLKSFHFAGVASMNITQ 1079
Query: 268 GVPRIMEIINGASNIKTPII-TAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444
GVPR+ EII+ A I TPII +L + + R ++ +IEKT LG+++ + V + +
Sbjct: 1080 GVPRMKEIIDAAKKISTPIIDVKLLPQFQSEHSYRSIRLQIEKTYLGEISNFYQEVYSPK 1139
Query: 445 SAALFISLDEKIIEEAY---LNIDSNTVKESILQTGKLKLKEKEI 570
L+I ++K +E+ L I +++K+ IL+ K +KE +I
Sbjct: 1140 DCHLYIEYNKKKLEQFRLYGLEIPLSSIKKGILEIAK-DIKEDQI 1183
[165][TOP]
>UniRef100_A4I9K6 DNA-directed RNA polymerase n=1 Tax=Leishmania infantum
RepID=A4I9K6_LEIIN
Length = 1590
Score = 116 bits (290), Expect = 1e-24
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 13/157 (8%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+++ L FL+ + K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T
Sbjct: 1120 LTKGMLLHFLEASARKVHRKLCEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQ 1179
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI-------------NIARMVKGRIEKTTLGQ 408
GVPR++EIIN +I TP+ITA + +D AR VKG +E+ L +
Sbjct: 1180 GVPRLVEIINANKSIATPVITAPIVLEDEFTSIDLAPASRTQYQAARAVKGLMERVLLKE 1239
Query: 409 VAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTV 519
+A+ + V T R+ + I L+ ++IE L ID+ V
Sbjct: 1240 IAREMVEVVTPRAYYIHIFLNMELIERLLLPIDAAVV 1276
[166][TOP]
>UniRef100_Q4Q3H2 DNA-directed RNA polymerase n=1 Tax=Leishmania major
RepID=Q4Q3H2_LEIMA
Length = 1582
Score = 114 bits (286), Expect = 4e-24
Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 13/157 (8%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+++ L FL+ + K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T
Sbjct: 1115 LTKGMLLHFLEASARKVHRKLCEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQ 1174
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI-------------NIARMVKGRIEKTTLGQ 408
GVPR++EIIN +I TP+ITA + +D AR VKG +E+ L +
Sbjct: 1175 GVPRLVEIINANKSIATPVITAPIVLEDEFTSIDLASASRTQYQAARAVKGLMERVLLKE 1234
Query: 409 VAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTV 519
+ + + V T R+ + I L+ ++IE L ID+ V
Sbjct: 1235 ITREMVEVVTPRAYYIHIFLNMELIERLLLPIDAAVV 1271
[167][TOP]
>UniRef100_A4HAF0 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
RepID=A4HAF0_LEIBR
Length = 1581
Score = 114 bits (285), Expect = 5e-24
Identities = 67/157 (42%), Positives = 89/157 (56%), Gaps = 13/157 (8%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R L F + + K E GTP GAI A S+GEP TQMTL+TFHFAGVASM++T
Sbjct: 1114 LTRGMLLRFFEDSARKVHRKLCEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQ 1173
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI-------------NIARMVKGRIEKTTLGQ 408
GVPR++EIIN NI TP+ITA + +D AR VKG +E+ L +
Sbjct: 1174 GVPRLVEIINANKNIATPVITAPILLEDEFTSIDLASARRTQYQAARAVKGLMERVLLKE 1233
Query: 409 VAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTV 519
+ + + V T R + I LD +IE L ID+ V
Sbjct: 1234 ITREMVEVVTPRQYYIQIFLDIGLIERLLLPIDAAVV 1270
[168][TOP]
>UniRef100_C6LP76 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581
RepID=C6LP76_GIALA
Length = 1742
Score = 113 bits (283), Expect = 9e-24
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 14/169 (8%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
I+R+ ++ FL +Y +E G+P GA+ A S+GEP TQMTLK+FH AG+ASMN+T
Sbjct: 1267 ITRKDIDDFLRQVRRKYIRLNLEPGSPCGAVAAQSVGEPSTQMTLKSFHHAGLASMNITQ 1326
Query: 268 GVPRIMEIINGASNIKTPIITAILE------------TDDNINIARMVKGRIEKTTLGQV 411
GVPR+ EI++G I TPI T L T+ + ARM+K IE T LGQ+
Sbjct: 1327 GVPRLKEIVDGVVKISTPITTVELHIDADEEEDPAIITEKYLEKARMMKNIIECTYLGQI 1386
Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLN--IDSNTVKESILQTGKLK 552
+ SI + S + ++LD KII + L I TV SIL K K
Sbjct: 1387 SASIIECYSQSSCHIEVNLDMKIIADMGLAGVITVETVVASILHNDKAK 1435
[169][TOP]
>UniRef100_A9CTM9 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
RepID=A9CTM9_ENTBH
Length = 1174
Score = 110 bits (274), Expect = 1e-22
Identities = 58/98 (59%), Positives = 70/98 (71%)
Frame = +1
Query: 145 KKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPI 324
K IE GT +GAI A SIGEPGTQMTLKTFHFAGVASMN+TLGVPRI EIIN S I TPI
Sbjct: 847 KFIEPGTAVGAIAAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINATSTISTPI 906
Query: 325 ITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
I+ + N+ A ++K ++EK L + K I ++ T
Sbjct: 907 ISV---KNVNLQDAYIIKQKLEKNVLKDIIKRIDIMYT 941
[170][TOP]
>UniRef100_P25202 DNA-directed RNA polymerase III subunit RPC1 n=2 Tax=Giardia
intestinalis RepID=RPC1_GIALA
Length = 1741
Score = 109 bits (272), Expect = 2e-22
Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 14/169 (8%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++++ ++ FL +Y +E G+P GA+ A S+GEP TQMTLK+FH AG+ASMN+T
Sbjct: 1267 LTKKDIDDFLRQVRRKYIRLNLEPGSPCGAVAAQSVGEPSTQMTLKSFHHAGLASMNITQ 1326
Query: 268 GVPRIMEIINGASNIKTPIITAILE------------TDDNINIARMVKGRIEKTTLGQV 411
GVPR+ EI++G I TPI T L T+ + ARM+K IE T LGQ+
Sbjct: 1327 GVPRLKEIVDGVVKISTPITTVELHVDVDKEELAATVTEKYLEKARMMKNIIECTYLGQI 1386
Query: 412 AKSIKVVATSRSAALFISLDEKIIEEAYLN--IDSNTVKESILQTGKLK 552
+ SI + + ++LD KII + L I TV SIL K K
Sbjct: 1387 SASIIECYSQSVCHIEVNLDMKIIADMGLAGIITVETVVASILHNDKAK 1435
[171][TOP]
>UniRef100_Q0U9K8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
RepID=Q0U9K8_PHANO
Length = 1720
Score = 108 bits (270), Expect = 3e-22
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 2/149 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+S++ L+ L R+ + G +G + A SIGEP TQMTL TFHFAGV+S NVTL
Sbjct: 1058 LSKKALDYILGELQDRFLKAAVAPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTL 1117
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI--NIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A+NIKTP + + +TD N A++++ RIE TTL + +S+++
Sbjct: 1118 GVPRLKEILNIAANIKTPSM-LVRQTDKNAGQQEAKVLRSRIELTTLRSLTQSVELYYDP 1176
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKES 528
A + D+ ++E ++ + N V ES
Sbjct: 1177 EIQATLVESDQDMVESYFIVPEENEVIES 1205
[172][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 106 bits (265), Expect = 1e-21
Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 304 LNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 363
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T LE D +I A++V+ IE TTL V S ++
Sbjct: 364 GVPRLKEILNVAKNIKTPALTVYLEKDIAADIEKAKVVQSAIEHTTLKNVTASTEIFYDP 423
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
+ + D + EAY I V+ESI L+ + K+ +K++
Sbjct: 424 DPRSTVLEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 474
[173][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 106 bits (265), Expect = 1e-21
Identities = 63/158 (39%), Positives = 90/158 (56%), Gaps = 11/158 (6%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N
Sbjct: 1046 TQFQKSVVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKN 1105
Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
IKTP +T L E +I +A++V+ IE TTL V S ++ I D +
Sbjct: 1106 IKTPALTVYLDPEVASDIELAKIVQSSIEHTTLKNVTSSTEIYYDPDPRTTVIEEDYDTV 1165
Query: 484 EEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
EAY I V+ESI L+ + K+ +K++
Sbjct: 1166 -EAYFAIPDQKVEESIEKQSPWLLRLELDRAKMLDKQL 1202
[174][TOP]
>UniRef100_B7R290 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Thermococcus sp.
AM4 RepID=B7R290_9EURY
Length = 391
Score = 106 bits (265), Expect = 1e-21
Identities = 54/142 (38%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ + ++E ++ ++ Y+ +E G PIG + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 37 LKKAEVEAIIEDAVNEYKRALVEPGEPIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PRI+EI++ N TP++T L+ D ++ AR V RIE TT+ +A+ + +
Sbjct: 97 GLPRIIEIVDARKNPSTPVMTVFLDEDHRHDLEKAREVARRIEGTTIENLAREMSI--DI 154
Query: 442 RSAALFISLDEKIIEEAYLNID 507
+ + LD + +E++ L+++
Sbjct: 155 LNFEFIVELDPERLEKSGLDME 176
[175][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 106 bits (265), Expect = 1e-21
Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 870 LNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 929
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T LE D +I A++V+ IE TTL V S ++
Sbjct: 930 GVPRLKEILNVAKNIKTPALTVYLEKDIAADIEKAKVVQSAIEHTTLKNVTASTEIFYDP 989
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
+ + D + EAY I V+ESI L+ + K+ +K++
Sbjct: 990 DPRSTVLEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1040
[176][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 106 bits (264), Expect = 1e-21
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1038 LNRSSFEWVVGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097
Query: 268 GVPRIMEIINGASNIKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T L+ D+I A++V+ IE T+L V S ++
Sbjct: 1098 GVPRLKEILNVAKNIKTPALTVYLDPALSDDIEKAKVVQSAIEHTSLKNVTSSTEIYYDP 1157
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
I D + EAY +I V+ESI L+ + K+ +K++
Sbjct: 1158 DPRTTVIEEDYDTV-EAYFSIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1208
[177][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 106 bits (264), Expect = 1e-21
Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+SR E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1043 LSRISFEWVMGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1102
Query: 268 GVPRIMEIINGASNIKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T LE + +I A++V+ IE TTL V + ++
Sbjct: 1103 GVPRLKEILNVAKNIKTPALTVYLEKESAADIEKAKIVQSAIEHTTLKNVTSATEIFYDP 1162
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
+ I D + EAY I V+ESI L+ + K+ +K++
Sbjct: 1163 DPRSTVIEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1213
[178][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 106 bits (264), Expect = 1e-21
Identities = 66/172 (38%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+SR E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1043 LSRISFEWVMGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1102
Query: 268 GVPRIMEIINGASNIKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T LE + +I A++V+ IE TTL V + ++
Sbjct: 1103 GVPRLKEILNVAKNIKTPALTVYLEKESAADIEKAKIVQSAIEHTTLKNVTSATEIFYDP 1162
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
+ I D + EAY I V+ESI L+ + K+ +K++
Sbjct: 1163 DPRSTVIEEDYDTV-EAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1213
[179][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 106 bits (264), Expect = 1e-21
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E + ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1038 LNRSSFEWVVGEIETQFQKSIVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097
Query: 268 GVPRIMEIINGASNIKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T L+ D+I A++V+ IE T+L V S ++
Sbjct: 1098 GVPRLKEILNVAKNIKTPALTVYLDPALSDDIEKAKVVQSAIEHTSLKNVTSSTEIYYDP 1157
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
I D + EAY +I V+ESI L+ + K+ +K++
Sbjct: 1158 DPRTTVIEEDYDTV-EAYFSIPDEKVEESIEKQSPWLLRLELDRAKMLDKQL 1208
[180][TOP]
>UniRef100_C5A207 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=RPOA2_THEGJ
Length = 391
Score = 106 bits (264), Expect = 1e-21
Identities = 53/142 (37%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ + ++E ++ ++ YR +E G PIG + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 37 LKKAEVEAIIEDAVNEYRKALVEPGEPIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINI--ARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PRI+EI++ N TP++T L+ + ++ AR V RIE TT+ +A+ + +
Sbjct: 97 GLPRIIEIVDARKNPSTPVMTVFLDEEHRYDLEKAREVARRIEGTTIENLAREMSI--DI 154
Query: 442 RSAALFISLDEKIIEEAYLNID 507
+ + +D + +E++ L+++
Sbjct: 155 LNFEFIVEIDPERLEKSGLDME 176
[181][TOP]
>UniRef100_Q976A6 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus tokodaii
RepID=RPOA2_SULTO
Length = 392
Score = 105 bits (262), Expect = 3e-21
Identities = 66/192 (34%), Positives = 112/192 (58%), Gaps = 8/192 (4%)
Frame = +1
Query: 10 KLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAH 189
KL + + +D + L N + ++ ++ +D+ + Y+ IE G +G + A
Sbjct: 20 KLPDKVIQDLREALLNTD------INLTESDVDKIIDLAVKDYQESLIEPGEAVGIVSAQ 73
Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL------ETDD 351
SIGEPGTQMTL+TFHFAG+ +NVTLG+PR++EI++ TPI+T L + +
Sbjct: 74 SIGEPGTQMTLRTFHFAGIRELNVTLGLPRLIEIVDARKTPSTPIMTIYLTDEYKYDKEK 133
Query: 352 NINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESI 531
+ IAR +IE T + V SI V T+ S + I LDE+++++ +D ++VK+ I
Sbjct: 134 ALEIAR----KIEYTKIENVISSISVDITNMS--ITIQLDEEMLKDK--GVDPSSVKKII 185
Query: 532 --LQTGKLKLKE 561
L+ GK+++++
Sbjct: 186 SKLKLGKIRIED 197
[182][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 105 bits (261), Expect = 3e-21
Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Frame = +1
Query: 154 EAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITA 333
+ G +G++ A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ E++N A NIKTP +T
Sbjct: 1025 QPGEMVGSVAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKELLNVAKNIKTPGLTI 1084
Query: 334 ILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNID 507
L + + A+MVK +E TTLG V + +V A I D + IEE +
Sbjct: 1085 YLNNEYIGDFEKAKMVKEDLEYTTLGHVTAAASIVYDPEPANSVIEEDREFIEELLEELK 1144
Query: 508 SNTVKES 528
V +S
Sbjct: 1145 DTAVLDS 1151
[183][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 104 bits (260), Expect = 4e-21
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E + ++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1038 LNRASFEWVMGEIETQFQKSIVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T L E +I A++V+ IE TTL V S ++
Sbjct: 1098 GVPRLKEILNVAKNIKTPAMTVFLDPEVASDIEKAKIVQSAIEHTTLKNVTSSTEIYYDP 1157
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
I D + EAY I V+ESI L+ + K+ +K++
Sbjct: 1158 DPRTTVIEDDYDTV-EAYFAIPDQKVEESIDKQSPWLLRLELDRAKMLDKQL 1208
[184][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 104 bits (260), Expect = 4e-21
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E + ++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1038 LNRASFEWVMGEIETQFQKSIVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T L E +I A++V+ IE TTL V S ++
Sbjct: 1098 GVPRLKEILNVAKNIKTPAMTVFLDPEVASDIEKAKIVQSAIEHTTLKNVTSSTEIYYDP 1157
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
I D + EAY I V+ESI L+ + K+ +K++
Sbjct: 1158 DPRTTVIEDDYDTV-EAYFAIPDQKVEESIDKQSPWLLRLELDRAKMLDKQL 1208
[185][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 104 bits (260), Expect = 4e-21
Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E L ++++ + G +G I A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1039 LNRDAFEWVLGTIEAQFQRSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1098
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINI--ARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T L+ + ++I A++++ IE TTL V + ++
Sbjct: 1099 GVPRLKEILNVAKNIKTPALTVYLDREIALDIEKAKVIQSSIEYTTLKNVTSATEIYYDP 1158
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI 531
+ I D + EAY +I V+E+I
Sbjct: 1159 DPTSTVIEEDFDTV-EAYFSIPDEKVEETI 1187
[186][TOP]
>UniRef100_Q9BMP2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Stylonychia mytilus
RepID=Q9BMP2_STYMT
Length = 1678
Score = 103 bits (258), Expect = 7e-21
Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
SR+ + G +G+IGA S+GEP TQMTL TFHFAGV++ NVTLGVPR+ EIIN A N
Sbjct: 967 SRFDQALVNPGEMVGSIGAQSMGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVAKN 1026
Query: 310 IKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
IKTP + L+ D + IA ++ GRIE TTL V KS + + DE++I
Sbjct: 1027 IKTPSMKIFLKDKDKQDERIATIIGGRIEHTTLCHVVKSSAIYYDPDPERTIVREDEELI 1086
[187][TOP]
>UniRef100_C5LSN9 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
RepID=C5LSN9_9ALVE
Length = 1667
Score = 103 bits (258), Expect = 7e-21
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ +R ++ L R+ + AG +G I A SIGEP TQMTL TFHFAGV S NVTL
Sbjct: 1076 LGQRAVDWLLGEVEQRFEKSLVAAGESVGTIAAQSIGEPATQMTLNTFHFAGVGSKNVTL 1135
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EIIN A N+KTP +T L D + A+ V+ +E T+LG++ +++
Sbjct: 1136 GVPRLKEIINVAKNLKTPSMTVYLHPDYASDDAKAKQVQSELEHTSLGKITSYTQILFDP 1195
Query: 442 RSAALFISLDEKIIEEAY 495
+ D +++EE Y
Sbjct: 1196 DVRTSILEEDRQLVEEYY 1213
[188][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 103 bits (256), Expect = 1e-20
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E L ++++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTL
Sbjct: 1038 LNRVSFEWVLGEIETQFQKSIVHPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTL 1097
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A NIKTP +T L E +I A++V+ IE TTL V S ++
Sbjct: 1098 GVPRLKEILNVAKNIKTPAMTVYLDPEVASDIEKAKIVQSAIEHTTLKNVTSSAEIYYDP 1157
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI---------LQTGKLKLKEKEI 570
I D + EAY I V+E+I L+ + K+ +K++
Sbjct: 1158 DPRTTVIEDDYDTV-EAYFAIPDQKVEETIDKQSPWLLRLELDRAKMLDKQL 1208
[189][TOP]
>UniRef100_C4Y5N4 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720
RepID=C4Y5N4_CLAL4
Length = 1402
Score = 102 bits (255), Expect = 2e-20
Identities = 61/151 (40%), Positives = 87/151 (57%), Gaps = 11/151 (7%)
Frame = +1
Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330
+ G +G I A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A NIKTP +T
Sbjct: 1018 VHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALT 1077
Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504
L+ + +I A++V+ IE TTL V + ++ + I D + EAY I
Sbjct: 1078 VYLDPEIASDIEKAKVVQSAIEHTTLKNVTSATEIFYDPDPRSTVIEEDYDTV-EAYFAI 1136
Query: 505 DSNTVKESI---------LQTGKLKLKEKEI 570
V+E+I L+ + K+ +K++
Sbjct: 1137 PDEKVEETIDNQSPWLLRLELDRAKMLDKQL 1167
[190][TOP]
>UniRef100_UPI00006A2ADB UPI00006A2ADB related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A2ADB
Length = 385
Score = 102 bits (253), Expect = 3e-20
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ QLE FL+ C +Y ++E G+ +GA+ A SIGEPGTQMTLKTFHFAGVASM
Sbjct: 103 QLDRITPTQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASM 162
Query: 256 NVTLGVPRIMEIINGASNIK 315
N+TLGVPRI EIIN + NI+
Sbjct: 163 NITLGVPRIKEIINASKNIR 182
[191][TOP]
>UniRef100_Q8U0M5 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus furiosus
RepID=RPOA2_PYRFU
Length = 397
Score = 101 bits (252), Expect = 4e-20
Identities = 50/113 (44%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+++ ++E +D + Y +E G P+G + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 39 LTKAEIEAIIDDVVKEYERALVEPGEPVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINIARM--VKGRIEKTTLGQVAKS 420
G+PRI+EI++ N TP++T L+ + + A+ V RIE TTL +A+S
Sbjct: 99 GLPRIIEIVDARKNPSTPMMTVYLDEEHRYDRAKAEEVARRIEGTTLENLARS 151
[192][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 101 bits (251), Expect = 5e-20
Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
+R++ ++ G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N
Sbjct: 1054 ARFQQCQVNPGEMVGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKN 1113
Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
IKTP +T L E N+++A+ V+ +IE TTL V + ++ I D +
Sbjct: 1114 IKTPSLTIYLLPEIASNMDLAKNVQTQIEHTTLKTVTSATEIHYDPDPQNTVIDEDRDFV 1173
Query: 484 EEAYLNIDSNTVKESI---------LQTGKLKLKEKEIKI 576
EA+ I V+E++ L+ + K+ +K++ +
Sbjct: 1174 -EAFFAIPDEEVEENLYKQSPWLLRLELDRAKMLDKKLSM 1212
[193][TOP]
>UniRef100_Q4Y2E0 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium
chabaudi RepID=Q4Y2E0_PLACH
Length = 176
Score = 99.8 bits (247), Expect = 1e-19
Identities = 54/118 (45%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
Frame = +1
Query: 226 TFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLG 405
TFHFAGVASMNVTLGVPRI EIIN ++ I+TPI+ L DN N A M+K ++EKT++
Sbjct: 1 TFHFAGVASMNVTLGVPRIKEIINASNVIQTPILNIPLRIKDNYNFALMMKSKLEKTSIR 60
Query: 406 QVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESIL-QTGKLKLKEKEIKI 576
+ + IK + + I +E++I++ +LNI++ T+++ IL QT K+K +I I
Sbjct: 61 DICEYIKENYCPKGIFISIKFNEELIQKLFLNINAYTIRDVILKQTHISKIKINKIYI 118
[194][TOP]
>UniRef100_C6A1G1 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A1G1_THESM
Length = 397
Score = 99.8 bits (247), Expect = 1e-19
Identities = 55/147 (37%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ + ++E +D + Y +E G +G + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 41 LKKAEIEAIIDEVVQEYEQALVEPGEAVGTVTAQSIGEPSTQMTLNTFHYAGVAEINVTL 100
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNINI--ARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PRI+EI++ N TPI+T L+ + N A V RIE TTL +A+S+ + +
Sbjct: 101 GLPRIIEIVDARKNPSTPIMTVHLDEEHRYNSEKALEVAKRIEGTTLESLARSMTLDILN 160
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVK 522
+ +D + +E++ L ++ K
Sbjct: 161 ME--FVVDIDPERLEKSGLTMEKIQAK 185
[195][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 99.4 bits (246), Expect = 2e-19
Identities = 57/132 (43%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Frame = +1
Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330
+ G +G + A SIGEP TQMTL TFHFAGVAS VT GVPR+ EI+N A N+KTP +T
Sbjct: 1058 VHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLT 1117
Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504
A LE D + A++++ IE TTL V + ++ + I DE+II+ + +
Sbjct: 1118 AYLEPDYAADQEKAKLIRSVIEHTTLKSVTVASEIYYDPDPRSTAIPEDEEIIQLHFSLL 1177
Query: 505 DSNTVKESILQT 540
D T K Q+
Sbjct: 1178 DDETEKSLAQQS 1189
[196][TOP]
>UniRef100_P11514 DNA-directed RNA polymerase subunit A'' n=1 Tax=Sulfolobus
acidocaldarius RepID=RPOA2_SULAC
Length = 393
Score = 99.4 bits (246), Expect = 2e-19
Identities = 61/194 (31%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Frame = +1
Query: 10 KLTETITEDDPKHLKNLNNFIPRISGI--SRRQLEVFLDICLSRYRFKKIEAGTPIGAIG 183
+L E + K ++L I I+G+ + ++ +D+ + Y+ IE G IG +
Sbjct: 13 RLNEIKDKIPDKLHEDLRAAIMDINGVELTEEDIDRIIDLTIREYQQSLIEPGEAIGVVT 72
Query: 184 AHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL------ET 345
A S+GEPGTQMTL+TFHFAG+ +NVTLG+PR++EI++ TP++T L +
Sbjct: 73 AQSVGEPGTQMTLRTFHFAGIRELNVTLGLPRLIEIVDARKVPSTPMMTIYLTDEYKTDK 132
Query: 346 DDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKE 525
D ++IAR RIE T + V S+ V ++ S L D++++++ ++I+
Sbjct: 133 DKALDIAR----RIEYTRVENVVSSVSVDISNMSITL--QFDQEMLKDKGVSIEEIKKII 186
Query: 526 SILQTGKLKLKEKE 567
+ L+ G++++++ +
Sbjct: 187 TKLKLGEIRIEDND 200
[197][TOP]
>UniRef100_P09847 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter
thermautotrophicus str. Winter RepID=RPOA2_METTW
Length = 449
Score = 99.4 bits (246), Expect = 2e-19
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Frame = +1
Query: 40 PKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMT 219
P+ ++ + I R G+S +L+ + Y +EAG +G + A S+GEPGTQMT
Sbjct: 90 PRLIEEIAEAIKR-HGLSDDELDELVRGVRRAYERAMVEAGEAVGTVAAQSVGEPGTQMT 148
Query: 220 LKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEK 393
++TFH+AGVA +NVTLG+PR++EI++ I TP ++ E D + R +I K
Sbjct: 149 MRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPTMSIYFEGDRKYDEEFVRKKANKICK 208
Query: 394 TTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVK 522
+TL V K+ + S LDE+ I E +L D K
Sbjct: 209 STLNDVLKNFSIQYADMSVE--AELDEEKIREKHLEYDDIIAK 249
[198][TOP]
>UniRef100_O27126 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=RPOA2_METTH
Length = 451
Score = 99.4 bits (246), Expect = 2e-19
Identities = 61/173 (35%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +1
Query: 10 KLTETITEDDPKHLKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAH 189
KL E I E KH +S +L+ + Y ++EAG +G + A
Sbjct: 91 KLIEDIAEVMKKH------------ELSDDELDELIRRVRRAYDRARVEAGEAVGTVAAQ 138
Query: 190 SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN--I 363
S+GEPGTQMT++TFH+AGVA +NVTLG+PR++EI++ I TP ++ E D +
Sbjct: 139 SVGEPGTQMTMRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPTMSIYFEGDLRYDEEF 198
Query: 364 ARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVK 522
R +I K+TL V K+ + S + LDE+ I+E +L D K
Sbjct: 199 VRRKANKIGKSTLNDVLKNFSIQYADMS--VVAELDEEKIQEKHLEYDEILAK 249
[199][TOP]
>UniRef100_B7Z6H4 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B7Z6H4_HUMAN
Length = 1369
Score = 99.0 bits (245), Expect = 2e-19
Identities = 59/167 (35%), Positives = 93/167 (55%)
Frame = +1
Query: 76 RISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASM 255
++ I+ Q+E FL+ C +Y ++E G+ +GA+ M
Sbjct: 1002 QLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGAL---------------------CTQM 1040
Query: 256 NVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVA 435
N+TLGVPRI EIIN + I TPIITA L+ DD+ + AR+VKGRIEKT LG++++ I+ V
Sbjct: 1041 NITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVF 1100
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ + L + I L +++ TV+ SI T KL++K ++ +
Sbjct: 1101 LPDDCFILVKLSLERIRLLRLEVNAETVRYSIC-TSKLRVKPGDVAV 1146
[200][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 99.0 bits (245), Expect = 2e-19
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 11/151 (7%)
Frame = +1
Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330
+ G +G I A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A NIKTP +T
Sbjct: 1062 VHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALT 1121
Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504
LE +I A++V+ IE T+L V + ++ I D + +AY +I
Sbjct: 1122 VYLEPSVAADIEKAKVVQSAIEHTSLKNVTAATEIYYDPDPRTTVIEEDIDTV-DAYFSI 1180
Query: 505 DSNTVKESI---------LQTGKLKLKEKEI 570
TV+ ++ L+ + K+ +K++
Sbjct: 1181 PDETVEATLDNQSPWLLRLELDRAKMLDKQL 1211
[201][TOP]
>UniRef100_P14247 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcus
vannielii SB RepID=RPOA2_METVS
Length = 386
Score = 99.0 bits (245), Expect = 2e-19
Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Frame = +1
Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330
IE G +G I A SIGEPGTQMT++TFH+AGVA +NVTLG+PR++EI++ TP ++
Sbjct: 54 IEPGEAVGVIAAQSIGEPGTQMTMRTFHYAGVAELNVTLGLPRMIEIVDARKEPSTPTMS 113
Query: 331 AILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504
L D + A +V IE TT+ V++ I V + + I LD + +E L +
Sbjct: 114 IYLRGDYKYDRESAAIVSKNIESTTVESVSEDISVDLVNE--CITIVLDVQQLESRQLTV 171
Query: 505 DSNTVKESILQTGKLKLKEKE 567
N V E+I KLK++E E
Sbjct: 172 --NNVVEAIKSKMKLKIEENE 190
[202][TOP]
>UniRef100_C7P942 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanocaldococcus
fervens AG86 RepID=C7P942_METFA
Length = 387
Score = 98.6 bits (244), Expect = 3e-19
Identities = 62/177 (35%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Frame = +1
Query: 34 DDPKHLKN-LNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGT 210
D P+ LK+ L + + ++ +E ++ ++ YR +E +G + A SIGEPGT
Sbjct: 14 DLPQSLKDELFEKLSKEKDLTDEMIEEIINEVVNAYRNAMVEPYEAVGIVAAQSIGEPGT 73
Query: 211 QMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILET--DDNINIARMVKGR 384
QMT++TFH+AGVA +NVTLG+PR++EI++ TPI+T L+ ++ A +
Sbjct: 74 QMTMRTFHYAGVAEINVTLGLPRMIEIVDARKEPSTPIMTIYLKEGYKNDKEKAEKIAKE 133
Query: 385 IEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKL 555
IE TL +A+SI + ++S + + LDE + + L ID V E+I + K+K+
Sbjct: 134 IESLTLENIAESISIDLWTQS--IKVELDENRLADRGLTIDD--VVEAIKKKVKVKI 186
[203][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 98.6 bits (244), Expect = 3e-19
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 11/160 (6%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
+R++ + G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N
Sbjct: 1054 ARFQQAVVSPGEMVGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKN 1113
Query: 310 IKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
IKTP +T L N+++A+ V+ +IE TTL V + ++ I D+ +
Sbjct: 1114 IKTPSLTIYLMPWIAANMDLAKNVQTQIEHTTLSTVTSATEIHYDPDPQDTVIEEDKDFV 1173
Query: 484 EEAYLNIDSNTVKESI---------LQTGKLKLKEKEIKI 576
EA+ I V+E++ L+ + K+ +K++ +
Sbjct: 1174 -EAFFAIPDEEVEENLYKQSPWLLRLELDRAKMLDKKLSM 1212
[204][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 98.2 bits (243), Expect = 4e-19
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 5/148 (3%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
SR++ K+ +G I A SIGEP TQMTL TFHFAGV S NVTLGVPR+ EIIN A+N
Sbjct: 997 SRFKAAKVNPAEMVGTIAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKEIINVATN 1056
Query: 310 IKTPIITAILETDD-----NINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDE 474
++TP + L+ + ++ A+ ++ +IE TTLG++A +V + D
Sbjct: 1057 LRTPSLLVCLKANKDGRPLDLPQAKKIQAKIEYTTLGKLAVQSEVYYDPDLRNSVVEADR 1116
Query: 475 KIIEEAYLNIDSNTVKESILQTGKLKLK 558
+ +AY I+ ++ L + L+++
Sbjct: 1117 DWL-DAYFEIEDADALQARLSSWALRIE 1143
[205][TOP]
>UniRef100_Q12WS7 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12WS7_METBU
Length = 386
Score = 98.2 bits (243), Expect = 4e-19
Identities = 54/160 (33%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Frame = +1
Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
G++++++E ++ ++ Y + +E +G + A SIGEPGTQMT++TFH+AGVA +NVT
Sbjct: 33 GVTKKEMEEIIERVMADYNYACVEPCEAVGVVSAQSIGEPGTQMTMRTFHYAGVAEINVT 92
Query: 265 LGVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
LG+PR++EI++ TP++T L E + + AR V IE T + +A V
Sbjct: 93 LGLPRLIEIVDARKTPSTPMMTVALAKEHAADRDFARKVAWEIEATHIEHLA---DVTTD 149
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLK 558
+ L + L+EK++ + +ID + + E + + K+ +K
Sbjct: 150 LANMNLILDLNEKMLLQR--DIDVDAIAEKLAEGLKVNVK 187
[206][TOP]
>UniRef100_Q2N151 RNA polymerase III large subunit (Fragment) n=1 Tax=Suberites
fuscus RepID=Q2N151_9METZ
Length = 269
Score = 97.4 bits (241), Expect = 7e-19
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +1
Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423
VASMN+TLGVPRI EIIN + I TPIITA L+ D + AR+VKGRIEKT LG+VA+ I
Sbjct: 1 VASMNITLGVPRIKEIINASKAISTPIITAHLKVDSDPEHARVVKGRIEKTLLGEVARYI 60
Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
+ V + I LD I+ L ID+ TV+ +I KLK+K K + I
Sbjct: 61 EEVYEPDGCYIKICLDSNRIKLLKLEIDTWTVQFAICSAPKLKIKPKHVSI 111
[207][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 97.4 bits (241), Expect = 7e-19
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++++ E L S++ + G +G + A SIGEP TQMTL TFHFAGVAS VT
Sbjct: 1037 LNKQTFEWVLSNVESQFLRSIVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTS 1096
Query: 268 GVPRIMEIINGASNIKTPIITAILETDD--NINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A N+KTP +T L+ D + A++++ IE TTL + + ++
Sbjct: 1097 GVPRLKEILNVAKNMKTPSLTVYLDKDHAADQEKAKLIRSAIEHTTLKSITVASEIYYDP 1156
Query: 442 RSAALFISLDEKIIEEAYLNIDSNT 516
+ I DE+II+ + +D T
Sbjct: 1157 DPRSTVIEEDEEIIQLHFSLMDEET 1181
[208][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 97.1 bits (240), Expect = 9e-19
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 2/126 (1%)
Frame = +1
Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330
+ G +G + A SIGEP TQMTL TFHFAGVAS VT GVPR+ EI+N A N+KTP +T
Sbjct: 1058 VHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLT 1117
Query: 331 AILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504
LE + + + A++V+ IE TTL V + ++ + I D++II+ + +
Sbjct: 1118 VYLEPEYSADQEKAKLVRSAIEHTTLKSVTVASEIYYDPDPRSTVIPEDDEIIQLHFSLL 1177
Query: 505 DSNTVK 522
D T K
Sbjct: 1178 DDETEK 1183
[209][TOP]
>UniRef100_C8SAT4 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Ferroglobus
placidus DSM 10642 RepID=C8SAT4_FERPL
Length = 376
Score = 97.1 bits (240), Expect = 9e-19
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 9/169 (5%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ ++ + ++ C Y +E G G + A SIGEPGTQMT++TFH+AGVA +NVTL
Sbjct: 28 VDKKTAKKVIEKCYEVYMKNLMEPGEAAGIVAAQSIGEPGTQMTMRTFHYAGVAEINVTL 87
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PR++EI++ N TP++T L E + AR V RIE TT+ VA +
Sbjct: 88 GLPRLIEILDVRKNPSTPMMTIRLLPEYAKDREKAREVANRIEATTVNDVA---DIATDL 144
Query: 442 RSAALFISLDEKIIEEAYL-------NIDSNTVKESILQTGKLKLKEKE 567
R+ + ++ D K +E+ L I+ + +E + GK+ ++ KE
Sbjct: 145 RNMRIIVTPDPKALEKKDLKFADVLKKIEKSVKEEVFEEDGKIIIQIKE 193
[210][TOP]
>UniRef100_P58192 DNA-directed RNA polymerase subunit A'' n=2 Tax=Sulfolobus
solfataricus RepID=RPOA2_SULSO
Length = 392
Score = 97.1 bits (240), Expect = 9e-19
Identities = 56/168 (33%), Positives = 96/168 (57%), Gaps = 8/168 (4%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL
Sbjct: 40 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 99
Query: 268 GVPRIMEIINGASNIKTPIITAIL------ETDDNINIARMVKGRIEKTTLGQVAKSIKV 429
G+PR++EI++ TP++T L + D + +AR ++E T + V S +
Sbjct: 100 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKRDRDKALEVAR----KLEYTKIENVVSSTSI 155
Query: 430 VATSRSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567
S S + + LD +++++ + +D VK++I L+ G ++E E
Sbjct: 156 DIASMS--IILQLDNEMLKDKGVTVDD--VKKAIGRLKLGDFMIEESE 199
[211][TOP]
>UniRef100_Q5JE34 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus
kodakarensis RepID=RPOA2_PYRKO
Length = 391
Score = 97.1 bits (240), Expect = 9e-19
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 2/162 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ + +++ +D + Y+ IE G +G + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 37 LKKDEIQAIIDETVREYQKALIEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNI--NIARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PRI+EI++ N TPI+T L+ + + A V RIE TTL +A+ + +
Sbjct: 97 GLPRIIEIVDARKNPSTPIMTVYLDEEHRYDRDKALEVARRIEGTTLENLAREETIDILN 156
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567
+ +D + +E+A L+++ K TG K E E
Sbjct: 157 ME--YVVEIDPERLEKAGLDMEKVVRK----LTGSFKSAEFE 192
[212][TOP]
>UniRef100_O28390 DNA-directed RNA polymerase subunit A'' n=1 Tax=Archaeoglobus
fulgidus RepID=RPOA2_ARCFU
Length = 380
Score = 97.1 bits (240), Expect = 9e-19
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Frame = +1
Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
G+ + + + ++ C Y +E G G + A SIGEPGTQMT++TFH+AGVA +NVT
Sbjct: 31 GLKKTEAKKVVEKCFQAYLANLMEPGEAAGIVAAQSIGEPGTQMTMRTFHYAGVAEINVT 90
Query: 265 LGVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVAT 438
LG+PR++EI++ N TP++T L E + AR V RIE T + VA +
Sbjct: 91 LGLPRLIEILDVRKNPSTPMMTIRLLPEYAKDREKAREVANRIEATYVKDVA---DIEVD 147
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKE 567
R + + DEK +E L ++ +K I + K +++E E
Sbjct: 148 IRRFTIIVKPDEKALERKGLTVED--LKSKIGKALKTEVEETE 188
[213][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 96.7 bits (239), Expect = 1e-18
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
+R+ K G IGA+ SIGEP TQMTL TFHFAGV++ NVTLGVPR+ EIIN A +
Sbjct: 1069 NRFLHAKCPPGEMIGAVAPQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVAKH 1128
Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
KTP +T L E + A+ V+ ++ TTL V +S ++ I D++++
Sbjct: 1129 CKTPSLTVYLRGEAARDAERAKQVQAELQHTTLNHVTQSTEIYYDPNPQDTVIEADQELV 1188
Query: 484 EEAY 495
Y
Sbjct: 1189 RSYY 1192
[214][TOP]
>UniRef100_Q2N0X2 RNA polymerase III large subunit (Fragment) n=1 Tax=Monosiga
brevicollis RepID=Q2N0X2_MONBE
Length = 233
Score = 96.7 bits (239), Expect = 1e-18
Identities = 50/112 (44%), Positives = 70/112 (62%)
Frame = +1
Query: 244 VASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIARMVKGRIEKTTLGQVAKSI 423
VA+MNVTLGVPRI EIIN A NI TP+ITA LE D + AR VK R+E TLG+VA
Sbjct: 1 VAAMNVTLGVPRIKEIINAAKNISTPVITAKLENDREESFARQVKARLETLTLGEVADHF 60
Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKIL 579
VV + + L+ K+I+ +L + NT+ +SI + K+K + + ++
Sbjct: 61 DVVCNEDGGYVRVKLNLKVIQRKHLEVTMNTIIDSIAASRLTKIKHEHLSVM 112
[215][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 96.7 bits (239), Expect = 1e-18
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 11/153 (7%)
Frame = +1
Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330
+ G +G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EI+N A N KTP +T
Sbjct: 982 VNPGEMVGVVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNFKTPALT 1041
Query: 331 AILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504
LE + +I A+ ++ IE T+L V ++ I D + EAY I
Sbjct: 1042 VYLEEEYATDIEKAKSIQSAIEHTSLKNVTACTEIYYDPDPRTTVIEEDFDTV-EAYFAI 1100
Query: 505 DSNTVKESI---------LQTGKLKLKEKEIKI 576
V+E++ L+ + K+ +K++ +
Sbjct: 1101 PDEKVEENLHKQSPWLLRLELDRAKMLDKQLSM 1133
[216][TOP]
>UniRef100_A2BN35 DNA-directed RNA polymerase subunit A'' n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=A2BN35_HYPBU
Length = 424
Score = 96.7 bits (239), Expect = 1e-18
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 2/158 (1%)
Frame = +1
Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
G++ + + + L Y + K+E G P+G + A SIGEPGTQMTL+TFH+AG+ NVT
Sbjct: 49 GLTPEEAKKIIVNVLYEYEYSKVEPGEPVGTVAAQSIGEPGTQMTLRTFHYAGIREFNVT 108
Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNI--NIARMVKGRIEKTTLGQVAKSIKVVAT 438
LG+PR +E+++ TPI+ L+ + N A+ V RIE T + VA + +
Sbjct: 109 LGLPRFIELVDARREPSTPIMHIYLDEEHRYDENKAKEVARRIEFTRVINVASEVDIDLV 168
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLK 552
+ + I LD ++E+ + ++ L+ GK++
Sbjct: 169 --NMRMVIKLDPVMLEDKGVTVEQVKKALERLKLGKVE 204
[217][TOP]
>UniRef100_Q9V113 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus abyssi
RepID=RPOA2_PYRAB
Length = 397
Score = 96.7 bits (239), Expect = 1e-18
Identities = 51/142 (35%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+++ ++E +D + Y +E G +G + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 39 LTKAEVETIIDEVVKEYERALVEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PRI+EI++ N TP++T L+ + + A V RIE TTL +A++ + +
Sbjct: 99 GLPRIIEIVDARKNPSTPMMTVYLDEEHRYDREKAEEVARRIEGTTLENLARTTTLDLIN 158
Query: 442 RSAALFISLDEKIIEEAYLNID 507
+ +D + +E++ L ++
Sbjct: 159 ME--FIVEIDPERLEKSGLTME 178
[218][TOP]
>UniRef100_P29158 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus celer
RepID=RPOA2_THECE
Length = 393
Score = 96.3 bits (238), Expect = 2e-18
Identities = 53/142 (37%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ + +++ +D + Y+ IE G IG + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 37 LKKAEVQAIIDETVKEYQKALIEPGEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 96
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PRI+EI++ N TPI+T L+ + + A V RIE T+L +A+ +
Sbjct: 97 GLPRIIEIVDARKNPSTPIMTVYLDEEHRYDREKALEVARRIEGTSLENLARETTI--DI 154
Query: 442 RSAALFISLDEKIIEEAYLNID 507
+ + +D + +E+A L+++
Sbjct: 155 LNFEFIVEIDPERLEKAGLDME 176
[219][TOP]
>UniRef100_O93777 DNA-directed RNA polymerase subunit A'' n=1 Tax=Pyrococcus
horikoshii RepID=RPOA2_PYRHO
Length = 397
Score = 96.3 bits (238), Expect = 2e-18
Identities = 52/142 (36%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+++ ++E +D + Y IE G +G + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 39 LTKVEVETIIDEVIKEYEKALIEPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PRI+EI++ N TP++T L+ + + A V RIE TTL +A++ + +
Sbjct: 99 GLPRIIEIVDARKNPSTPMMTVYLDEEHRYDREKAEEVARRIEGTTLENLARTTTLDLIN 158
Query: 442 RSAALFISLDEKIIEEAYLNID 507
+ +D + +E++ L ++
Sbjct: 159 ME--FIVEVDPERLEKSGLTME 178
[220][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 96.3 bits (238), Expect = 2e-18
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++++ E L+ +++ + G +G + A SIGEP TQMTL TFHFAGVAS VT
Sbjct: 1037 LTKQTFEWVLNNIEAQFLRSIVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTS 1096
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A N+KTP +T LE + A++++ IE TTL V + ++
Sbjct: 1097 GVPRLKEILNVAKNMKTPSLTVYLEESYATDQEKAKLIRSAIEHTTLKSVPVASEIYYDP 1156
Query: 442 RSAALFISLDEKIIEEAYLNIDSNT 516
++ I DE+II+ + +D T
Sbjct: 1157 DPSSTVIEEDEEIIQLHFSLMDEET 1181
[221][TOP]
>UniRef100_UPI0001A48A43 DNA-DIRECTED RNA POLYMERASE RPO1C SUBUNIT n=1 Tax=Sulfolobus
shibatae RepID=UPI0001A48A43
Length = 395
Score = 95.9 bits (237), Expect = 2e-18
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL
Sbjct: 43 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 102
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PR++EI++ TP++T L E + A V ++E T + V S + S
Sbjct: 103 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKHDKEKALEVARKLEYTKIENVVSSTSIDIAS 162
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567
S + + LD +++++ + +D VK++I L+ G+ + E E
Sbjct: 163 MS--IILQLDNEMLKDKGVTVDD--VKKAINRLKLGEFVIDESE 202
[222][TOP]
>UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BQ02_THAPS
Length = 1627
Score = 95.9 bits (237), Expect = 2e-18
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
+R+ K+ G G + A SIGEP TQMTL TFH+AGV++ NVTLGVPR+ EIIN A
Sbjct: 1070 ARFHHAKVSPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKT 1129
Query: 310 IKTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
+KTP +T L+ + ++A++V IE T L + K ++ ++ D + +
Sbjct: 1130 VKTPGLTIYLQNHVSGDADVAKLVHSMIEYTVLTDLTKLTEIYYDPDPVNTIVAKDREFV 1189
Query: 484 EEAY 495
+E Y
Sbjct: 1190 KEYY 1193
[223][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 95.9 bits (237), Expect = 2e-18
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Frame = +1
Query: 151 IEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIIT 330
+ G +G + A SIGEP TQMTL TFHFAGVAS VT GVPR+ EI+N A N+KTP T
Sbjct: 740 VHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSST 799
Query: 331 AILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNI 504
LE + I+ A+ ++ IE TTL V + ++ + I DE+II+ + +
Sbjct: 800 VYLEPEYAIDQEKAKFIRSAIEHTTLKSVTVASEIYYDPDPRSTVIPDDEEIIQLHFSLL 859
Query: 505 DSNTVK 522
D T K
Sbjct: 860 DDETEK 865
[224][TOP]
>UniRef100_Q464Y8 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q464Y8_METBF
Length = 426
Score = 95.9 bits (237), Expect = 2e-18
Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 6/154 (3%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261
+G+S++++E ++ + YR IE G + A SIGEPGTQMT++TFH+AGVA +NV
Sbjct: 32 AGVSKKEMEEIIEQVMEEYRSSCIEPCDAAGVVAAQSIGEPGTQMTMRTFHYAGVAEINV 91
Query: 262 TLGVPRIMEIINGASNIKTPIITAILETDDNINIA------RMVKGRIEKTTLGQVAKSI 423
TLG+PR++EI++ TP++T L ++ + A R + IE T + +A
Sbjct: 92 TLGLPRLIEIVDARKIPSTPMMTIALSKENPEDYAYDREKTRALAWEIEATKIDHIA--- 148
Query: 424 KVVATSRSAALFISLDEKIIEEAYLNIDSNTVKE 525
V L I L EK +E + ID VKE
Sbjct: 149 DVTTDLSQMKLIIDLHEKAMEGRNITIDQ--VKE 180
[225][TOP]
>UniRef100_B8YB54 RNA polymerase subunit 1C n=1 Tax=Sulfolobus shibatae B12
RepID=B8YB54_SULSH
Length = 395
Score = 95.9 bits (237), Expect = 2e-18
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL
Sbjct: 43 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 102
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PR++EI++ TP++T L E + A V ++E T + V S + S
Sbjct: 103 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKHDKEKALEVARKLEYTKIENVVSSTSIDIAS 162
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567
S + + LD +++++ + +D VK++I L+ G+ + E E
Sbjct: 163 MS--IILQLDNEMLKDKGVTVDD--VKKAINRLKLGEFVIDESE 202
[226][TOP]
>UniRef100_C3MZM9 DNA-directed RNA polymerase subunit A'' n=6 Tax=Sulfolobus
islandicus RepID=RPOA2_SULIA
Length = 392
Score = 95.9 bits (237), Expect = 2e-18
Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R +++ D+ + Y I G IG + A S+GEPGTQMTL+TFHFAG+ +NVTL
Sbjct: 40 VTRDEIDKIFDLAIKEYSEGLIAPGEAIGIVAAQSVGEPGTQMTLRTFHFAGIRELNVTL 99
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PR++EI++ TP++T L E + A V ++E T + V S + S
Sbjct: 100 GLPRLIEIVDAKKVPSTPMMTIYLTDEYKHDKEKALEVARKLEYTKIENVVSSTSIDIAS 159
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI--LQTGKLKLKEKE 567
S + + LD +++++ + +D VK++I L+ G+ + E E
Sbjct: 160 MS--IILQLDNEMLKDKGVTVDD--VKKAINRLKLGEFVIDESE 199
[227][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 95.5 bits (236), Expect = 3e-18
Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R E + +R+ + G IG + A SIGEP TQMTL TFHFAGV++ NVTL
Sbjct: 1059 LTREAFEWVIGEVETRFLMSLVAPGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTL 1118
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDN--INIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EIIN A IKTP +T L+ N A+ V+ +E TTL V ++ ++
Sbjct: 1119 GVPRLREIINVAKKIKTPSLTVYLKPGVNKEKERAKNVQCALEYTTLRSVTQATEIWYDP 1178
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI 531
+ I D + ++ Y D + E I
Sbjct: 1179 EPMSTLIEEDMEFVKSYYEMPDEDVAPEKI 1208
[228][TOP]
>UniRef100_B6YT17 DNA-directed RNA polymerase subunit A'' n=1 Tax=Thermococcus
onnurineus NA1 RepID=RPOA2_THEON
Length = 391
Score = 95.5 bits (236), Expect = 3e-18
Identities = 52/140 (37%), Positives = 84/140 (60%), Gaps = 2/140 (1%)
Frame = +1
Query: 94 RRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGV 273
+ ++E ++ + Y+ +E G IG + A SIGEP TQMTL TFH+AGVA +NVTLG+
Sbjct: 39 KAEVEAIIEETVKEYQNSLVEPGEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGL 98
Query: 274 PRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVATSRS 447
PRI+EI++ N TPI+T L+ + A V RIE TTL +A+ + + +
Sbjct: 99 PRIIEIVDARKNPSTPIMTVYLDEKHRYDREKALEVARRIEGTTLENLAREMSI--DILN 156
Query: 448 AALFISLDEKIIEEAYLNID 507
+ +D + +E++ L+++
Sbjct: 157 FEFIVEIDPERLEKSGLDME 176
[229][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 95.1 bits (235), Expect = 3e-18
Identities = 54/131 (41%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
SR+ G +G + A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ EI+N A+N
Sbjct: 1067 SRFARAAANPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATN 1126
Query: 310 IKTPIITAILE---TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKI 480
IKTP +T E T D A++++ +E T+L V +S ++ + I D +
Sbjct: 1127 IKTPSMTVYQEGVKTHDKEG-AKLLRSLVEHTSLRSVTESTEIYYDPDIQSTVIENDRDM 1185
Query: 481 IEEAYLNIDSN 513
+E ++ + N
Sbjct: 1186 VESYFIIPEDN 1196
[230][TOP]
>UniRef100_B5IW00 Putative uncharacterized protein (Fragment) n=1 Tax=Thermococcus
barophilus MP RepID=B5IW00_9EURY
Length = 169
Score = 95.1 bits (235), Expect = 3e-18
Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+ ++++E ++ + Y +E G IG + A SIGEP TQMTL TFH+AGVA +NVTL
Sbjct: 39 LKKKEVEAIIEEVVKEYENAVVEPGEAIGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTL 98
Query: 268 GVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSI 423
G+PRI+EI++ N TPI+T L+ + + A V +IE TTL +A+S+
Sbjct: 99 GLPRIIEIVDARKNPSTPIMTVYLDEEHRYDREKALEVARKIEGTTLINLAQSM 152
[231][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 94.4 bits (233), Expect = 6e-18
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 3/140 (2%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
SR+ AG +G + A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ EI+N A+N
Sbjct: 1071 SRFAKANAPAGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATN 1130
Query: 310 IKTPIITAILE---TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKI 480
IKTP +T E T D A+ ++ +E T+L V ++ ++ + I D +
Sbjct: 1131 IKTPSMTVYQEPGRTHDKEG-AKQLRSVVEHTSLRSVTEATEIYYDPDIQSTVIENDRDM 1189
Query: 481 IEEAYLNIDSNTVKESILQT 540
+ E+Y I + +S Q+
Sbjct: 1190 V-ESYFIIPEDVTDDSSRQS 1208
[232][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 94.4 bits (233), Expect = 6e-18
Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 2/147 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++R+ + L+ +++ + G +G + A SIGEP TQMTL TFHFAGVAS VT
Sbjct: 1037 LNRQTFDWVLNNIEAQFLRSIVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTS 1096
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ EI+N A N+KTP +T L+ + + A+ ++ IE TTL V + ++
Sbjct: 1097 GVPRLKEILNVAKNMKTPSLTVYLDPEYAADQEKAKEIRSAIEHTTLKSVTVASEIYYDP 1156
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVK 522
+ I DE+II+ + +D T K
Sbjct: 1157 DPRSTVIEDDEEIIQLHFSLMDEETEK 1183
[233][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 94.4 bits (233), Expect = 6e-18
Identities = 57/138 (41%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Frame = +1
Query: 139 RFKKIEA--GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNI 312
RF K A G +G + A SIGEP TQMTL TFHFAGV+S NVTLGVPR+ EI+N A+NI
Sbjct: 1073 RFAKAAASPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATNI 1132
Query: 313 KTPIITAILE--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIE 486
KTP +T E T + A+ ++ +E T+L V ++ ++ I D ++
Sbjct: 1133 KTPSMTVYQEPYTCHDKESAKQLRSAVEHTSLRSVTEATEIYYDPDIQTTVIENDRDMV- 1191
Query: 487 EAYLNIDSNTVKESILQT 540
E+Y I + +S Q+
Sbjct: 1192 ESYFIIPEDVTDDSTRQS 1209
[234][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 94.0 bits (232), Expect = 8e-18
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
SR++ G IG + A SIGEP TQMTL TFHFAGV++ NVTLGVPR+ EIIN A
Sbjct: 1055 SRFKMALAPPGDGIGTVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINIAKK 1114
Query: 310 IKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
IKTP +T L D + +A+ V+ +E TTL VA ++ I D++ +
Sbjct: 1115 IKTPSLTVALRKDLAGDRAMAKNVQASLEYTTLHSVAAVSEIYYDPDPTDTVIEEDKEFV 1174
Query: 484 EEAY 495
Y
Sbjct: 1175 RAYY 1178
[235][TOP]
>UniRef100_B8D6G8 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D6G8_DESK1
Length = 406
Score = 94.0 bits (232), Expect = 8e-18
Identities = 59/193 (30%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Frame = +1
Query: 10 KLTETITEDDPKHLKN-LNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGA 186
+L E +++ + ++N L N +I I+R +E F++ + RY IE G +G I A
Sbjct: 16 RLKENVSQQVYEEVRNKLLNIAGKIV-ITRETVERFIEHIIERYHSSLIEPGEAVGTIAA 74
Query: 187 HSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL--ETDDNIN 360
S+GEP TQMTL+ FH+AGV NVTLG+PR++EI++ +TPI+ L E +
Sbjct: 75 QSLGEPSTQMTLRVFHYAGVREYNVTLGLPRLIEIVDARKKPETPIMEIYLVDEYRRSEE 134
Query: 361 IARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQT 540
AR + +IE T L + + + + + LD +++E+ L+++ K L
Sbjct: 135 KAREIARKIESTYLENITRELDIDLI--EGVTRVRLDPEMLEDKGLSVEVIIKKLKELDV 192
Query: 541 GKLKLKEKEIKIL 579
G++ + +++
Sbjct: 193 GEVSRGDDPYEVI 205
[236][TOP]
>UniRef100_A3DMP5 DNA-directed RNA polymerase, subunit A' n=1 Tax=Staphylothermus
marinus F1 RepID=A3DMP5_STAMF
Length = 421
Score = 94.0 bits (232), Expect = 8e-18
Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 2/157 (1%)
Frame = +1
Query: 85 GISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 264
G+ +++ + + RY + E G P+G + A SIGEP TQMTL+TFH+AGV NVT
Sbjct: 43 GLYIEEVKAIIKETIDRYMRSQAEPGEPVGTVAAQSIGEPSTQMTLRTFHYAGVREFNVT 102
Query: 265 LGVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLGQVAKSIKVVAT 438
LG+PR++EI++ TPI+ L+ + + A+ V IE TT+ ++K I V
Sbjct: 103 LGLPRLIEIVDARKKPGTPIMEIPLDEEHKYDEEKAKKVARMIESTTIENISKEINVDPY 162
Query: 439 SRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKL 549
+ I LD +++ + +++D L+ GK+
Sbjct: 163 EGAT---IVLDSEMLSDKGISVDEVVKVLEKLKLGKV 196
[237][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 94.0 bits (232), Expect = 8e-18
Identities = 54/135 (40%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Frame = +1
Query: 106 EVFLDIC---LSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVP 276
+ FL +C S++ G +GA+ A SIGEP TQMTL TFH+AGV+S NVTLGVP
Sbjct: 1059 KAFLWVCGEIESKFLQALAHPGEMVGALAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVP 1118
Query: 277 RIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSA 450
R+ EIIN A +KTP +T L+ +++ A++VK ++E TTL V + ++
Sbjct: 1119 RLKEIINIAKQVKTPSLTIYLKPHMARDMDRAKIVKSQLEYTTLANVTSATEIYYDPDPQ 1178
Query: 451 ALFISLDEKIIEEAY 495
IS D + + +
Sbjct: 1179 NTIISEDAEFVNSYF 1193
[238][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 93.6 bits (231), Expect = 1e-17
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
Frame = +1
Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339
G +GA+ A SIGEP TQMTL TFHFAGV S NVTLGVPR+ E+IN N+KTP T L
Sbjct: 1399 GECVGALAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKELINIVKNVKTPSTTIYL 1458
Query: 340 E--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513
+ ++ A+ + ++E TTL Q+ +++ + + D+ + E Y D +
Sbjct: 1459 DDMVSNDQQKAKDILTKLEYTTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDED 1518
Query: 514 TVKESI------LQTGKLKLKEKEI 570
+ S+ +Q + + EK++
Sbjct: 1519 DTQYSLGEWVLRIQLTNIHVNEKKL 1543
[239][TOP]
>UniRef100_A1RWW4 DNA-directed RNA polymerase, subunit A' n=1 Tax=Thermofilum pendens
Hrk 5 RepID=A1RWW4_THEPD
Length = 403
Score = 93.6 bits (231), Expect = 1e-17
Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 2/167 (1%)
Frame = +1
Query: 82 SGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNV 261
+G+SR + ++ L RY + G +G + A SIGEP TQMTL+TFHFAGV +NV
Sbjct: 36 AGLSRSEALSVINEALRRYLSSLVSPGEAVGMVAAQSIGEPATQMTLRTFHFAGVRELNV 95
Query: 262 TLGVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVA 435
TLG+PR++EI++ TPI+ LE + +++ A + IE TT+ + SI +
Sbjct: 96 TLGLPRLIEIVDLRREPSTPIMEVYLEPEHAKDLDFALKIAREIELTTMENLCSSITI-- 153
Query: 436 TSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEKEIKI 576
A+ + LD ++E + +D + I KLK K+ +I++
Sbjct: 154 DYFEFAIVMELDPDMMENRGVTMD-----DVINALEKLKGKKGKIEV 195
[240][TOP]
>UniRef100_A8TEB9 DNA-directed RNA polymerase, subunit A'' n=1 Tax=Methanococcus
voltae A3 RepID=A8TEB9_METVO
Length = 387
Score = 93.6 bits (231), Expect = 1e-17
Identities = 59/172 (34%), Positives = 96/172 (55%), Gaps = 2/172 (1%)
Frame = +1
Query: 52 KNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTF 231
+NL N I + + S ++ ++ Y +E G +G + A SIGEPGTQMT++TF
Sbjct: 21 QNLLNKILKENIESEEMIDEIVNETQIAYERTLVEPGEAVGVVAAQSIGEPGTQMTMRTF 80
Query: 232 HFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNIN--IARMVKGRIEKTTLG 405
H+AGVA +NVTLG+PR++EI++ TP +T L D + A+ V IE TT+
Sbjct: 81 HYAGVAELNVTLGLPRMIEIVDARKEPSTPTMTINLLEDYKYDREKAQQVAKNIESTTVE 140
Query: 406 QVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKE 561
VA +I V ++ ++ ++ +E+ L+++ V SI KLK+ +
Sbjct: 141 SVADNISVNLVEECISIILNAEK--LEKRNLSVED--VVNSIKSKMKLKIDQ 188
[241][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 93.6 bits (231), Expect = 1e-17
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 8/145 (5%)
Frame = +1
Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339
G +GA+ A SIGEP TQMTL TFHFAGV S NVTLGVPR+ E+IN N+KTP T L
Sbjct: 1402 GECVGALAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKELINIVKNVKTPSTTIYL 1461
Query: 340 E--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513
+ ++ A+ + ++E TTL Q+ +++ + + D+ + E Y D +
Sbjct: 1462 DDMVSNDQQKAKDILTKLEYTTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDED 1521
Query: 514 TVKESI------LQTGKLKLKEKEI 570
+ S+ +Q + + EK++
Sbjct: 1522 DTQYSLGEWVLRIQLTNIHVNEKKL 1546
[242][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 93.2 bits (230), Expect = 1e-17
Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
SR++ G IG + A SIGEP TQMTL TFHFAGV++ NVTLGVPR+ E+IN A
Sbjct: 1053 SRFKVALAPPGDGIGTVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKELINIAKK 1112
Query: 310 IKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
IKTP +T L D + +A+ V+ +E TTL VA + +V I D++ +
Sbjct: 1113 IKTPSLTVALRKDLAGDRAMAKNVQSILEYTTLHSVAAASEVWYDPDPTDTVIEEDKEFV 1172
Query: 484 EEAY 495
Y
Sbjct: 1173 RSYY 1176
[243][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 93.2 bits (230), Expect = 1e-17
Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ + L+ L +R+ + AG +G + A S+GEP TQMTL TFHFAGV++ NVTL
Sbjct: 1053 LNNKALDWLLGELETRFFLAQAHAGECVGTVAAQSLGEPTTQMTLNTFHFAGVSAKNVTL 1112
Query: 268 GVPRIMEIINGASNIKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKV---- 429
GVPR+ E+IN A NIKTP +T L +N + A+ ++ ++E T V K+ ++
Sbjct: 1113 GVPRLTELINLAKNIKTPTLTVHLLPGLRENKDAAKEIQSKLEYTCFKNVVKTTEIWYDP 1172
Query: 430 VATSRSAALFISLDEKIIEEAY 495
V + + I DE+++ Y
Sbjct: 1173 VDPANANQTVIGEDEEMLSSYY 1194
[244][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 93.2 bits (230), Expect = 1e-17
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Frame = +1
Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339
G +GA+ A SIGEP TQMTL TFHFAGV S NVTLGVPR+ E+IN N+KTP T L
Sbjct: 1320 GECVGALAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLKELINIVKNVKTPSTTIYL 1379
Query: 340 E--TDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513
+ ++ A+ + ++E TTL Q+ +++ + + + D+ ++E Y D +
Sbjct: 1380 DDIVSNDQQKAKDILTKLEYTTLKQLTSHAQIIYDPNTTSTILEEDKTWVDEFYEFPDED 1439
Query: 514 TVKESI------LQTGKLKLKEKEI 570
+ ++ +Q + + EK++
Sbjct: 1440 DTQYTLGEWVLRIQLTNIHVNEKKL 1464
[245][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 93.2 bits (230), Expect = 1e-17
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +1
Query: 160 GTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAIL 339
G G + A SIGEP TQMTL TFH+AGV+S NVTLGVPR+ EIIN A NIKTP +T L
Sbjct: 1073 GEMCGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINCAENIKTPSVTVYL 1132
Query: 340 --ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNIDSN 513
+ + A++++ + TTL V +++V +A I D+ + EA+ I
Sbjct: 1133 TEQYSQSQESAKVIQTALAHTTLQTVTSAVEVHYDPDPSATVIEEDKDFV-EAFFAIPDE 1191
Query: 514 TVKESI 531
V+ S+
Sbjct: 1192 EVEASL 1197
[246][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 93.2 bits (230), Expect = 1e-17
Identities = 52/148 (35%), Positives = 86/148 (58%), Gaps = 1/148 (0%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+++ L+ L R+ + G +G + A SIGEP TQMTL TFHFAGV+S NVTL
Sbjct: 1051 LNKEALKYILGELEDRFLKAAVAPGEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTL 1110
Query: 268 GVPRIMEIINGASNIKTP-IITAILETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSR 444
GVPR+ EI+N A+NIKTP ++ + + A+ ++ IE TTL + +++++
Sbjct: 1111 GVPRLKEILNVAANIKTPSMLVRQINKKADQGDAKKLRSTIELTTLRSLTQAVELYYDPD 1170
Query: 445 SAALFISLDEKIIEEAYLNIDSNTVKES 528
+ + D+ ++E ++ + + V ES
Sbjct: 1171 IQSTRVEDDQDMVESYFILPEEDEVIES 1198
[247][TOP]
>UniRef100_A3CS85 DNA-directed RNA polymerase, subunit A' n=1 Tax=Methanoculleus
marisnigri JR1 RepID=A3CS85_METMJ
Length = 390
Score = 93.2 bits (230), Expect = 1e-17
Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
++ + E L++ S Y+ +IE +G + A SIGEPGTQMT++TFH+AGVA +NVTL
Sbjct: 31 VTEEEFEQILEMVFSEYQKSRIEPCEAVGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTL 90
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
G+PR++EI++ TP + L D N + AR V +IE L + +
Sbjct: 91 GLPRLIEIMDARREPSTPTMAVHLLDDWAFNRDRAREVSWQIEAAPLHEFG---DITIDM 147
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESILQTGKLKLKEK 564
+ + + L++ + + ++ID IL+ G K++EK
Sbjct: 148 ENMQVLVMLNKAVCDRRKISID------EILEAGPRKMREK 182
[248][TOP]
>UniRef100_Q8PUR2 DNA-directed RNA polymerase subunit A'' n=1 Tax=Methanosarcina
mazei RepID=RPOA2_METMA
Length = 408
Score = 93.2 bits (230), Expect = 1e-17
Identities = 56/159 (35%), Positives = 87/159 (54%), Gaps = 6/159 (3%)
Frame = +1
Query: 49 LKNLNNFIPRISGISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKT 228
LK L + + + +G+S++++E ++ + Y IE G + A SIGEPGTQMT++T
Sbjct: 23 LKTLRDDVIK-AGVSKKEMEEIIERVMEEYTVSCIEPCDAAGVVAAQSIGEPGTQMTMRT 81
Query: 229 FHFAGVASMNVTLGVPRIMEIINGASNIKTPIITAILETDDNINIA------RMVKGRIE 390
FH+AGVA +NVTLG+PR++EI++ TP++T L + + A R + IE
Sbjct: 82 FHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKEHPEDYAYDREKTRALAWEIE 141
Query: 391 KTTLGQVAKSIKVVATSRSAALFISLDEKIIEEAYLNID 507
T + +A V L I L EK +E + ID
Sbjct: 142 ATKIDHIA---DVTTDLSQMKLIIDLHEKAMEGRNITID 177
[249][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 92.8 bits (229), Expect = 2e-17
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 130 SRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIMEIINGASN 309
SR+ + G IG + A SIGEP TQMTL TFH+AGV++ NVTLGVPR+ EIIN A N
Sbjct: 1071 SRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKN 1130
Query: 310 IKTPIITAIL--ETDDNINIARMVKGRIEKTTLGQVAKSIKVVATSRSAALFISLDEKII 483
IKTP ++ L E + +A+ V+ +E TTL V + ++ I D + +
Sbjct: 1131 IKTPSLSVHLKPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFV 1190
Query: 484 EEAY 495
+ Y
Sbjct: 1191 QSYY 1194
[250][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 92.8 bits (229), Expect = 2e-17
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = +1
Query: 88 ISRRQLEVFLDICLSRYRFKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTL 267
+SR E + SR+ + G IG + A SIGEP TQMTL TFHFAGV++ NVTL
Sbjct: 248 LSRESFEWVVGEIESRFLQSLVVPGEMIGVVAAQSIGEPATQMTLNTFHFAGVSAKNVTL 307
Query: 268 GVPRIMEIINGASNIKTPIITAILETD--DNINIARMVKGRIEKTTLGQVAKSIKVVATS 441
GVPR+ E+IN A +IKTP ++ L+ D A+ V+ +E TTL V ++ +V
Sbjct: 308 GVPRLRELINVAKSIKTPSLSVYLKPDAGKTKERAKTVQCALEYTTLRSVTQATEVWYDP 367
Query: 442 RSAALFISLDEKIIEEAYLNIDSNTVKESI 531
+ I D + Y D E I
Sbjct: 368 DPMSTIIEEDVDFVMSYYEMPDEEVALEKI 397