BB909082 ( RCE07764 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  361 bits (927), Expect = 2e-98
 Identities = 170/191 (89%), Positives = 180/191 (94%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
           VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSSYD
Sbjct: 332 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYD 391

Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
           QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNN
Sbjct: 392 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNN 451

Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
           MTFLLPDGYAYRRT CG+PSGLYNTQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG
Sbjct: 452 MTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILG 511

Query: 542 DDNTGMTTIPI 574
            DNTGMT + I
Sbjct: 512 GDNTGMTNLAI 522

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  284 bits (727), Expect = 3e-75
 Identities = 130/195 (66%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIRGSNRYIEQIARDYSTFFSLDW 169
           VDD FI+ ELM++FPL + AR P      CIMY  ETIRGSNRY++ IARD+ +FF++DW
Sbjct: 317 VDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIRGSNRYLDSIARDFISFFTIDW 376

Query: 170 SSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHT 349
           SS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFLHT
Sbjct: 377 SSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHT 436

Query: 350 WYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFIL 529
           WYNNM F+  DG+AY R+  G+PSGL NTQYLDSF NLFLIID + EFGFT +EI   + 
Sbjct: 437 WYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCNLFLIIDGLFEFGFTQAEILSIVF 496

Query: 530 LVLGDDNTGMTTIPI 574
            ++GDDN+G T + I
Sbjct: 497 FIMGDDNSGFTMMDI 511

[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  275 bits (702), Expect = 2e-72
 Identities = 122/187 (65%), Positives = 151/187 (80%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
           VDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN +I+  A+ + ++F++DWS YD
Sbjct: 317 VDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYD 376

Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
           QRLPR ITD+YYTDFL SLI+IN GYQPT +Y  YPDL    ++ RM NLLHFLHTWYNN
Sbjct: 377 QRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNN 436

Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
           M ++  DG+AY R  CG+PSGL+NTQYLDSFGNL+LIID MLEFG +  EI   +LL++G
Sbjct: 437 MVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMG 496

Query: 542 DDNTGMT 562
           DDN+G T
Sbjct: 497 DDNSGFT 503

[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  270 bits (691), Expect = 5e-71
 Identities = 119/187 (63%), Positives = 153/187 (81%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
           +DD+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I++IA  + +FF++DWS +D
Sbjct: 316 MDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKIASSFRSFFTIDWSGFD 375

Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
           QRLPRVITDI+++DFL  +IVI+HGYQPTY+YP+YPDL   K++ RMDN+L FLHTWYNN
Sbjct: 376 QRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNN 435

Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
           + F+  DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI +  LLV+G
Sbjct: 436 LVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMG 495

Query: 542 DDNTGMT 562
           DDN+  T
Sbjct: 496 DDNSAFT 502

[5][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  265 bits (677), Expect = 2e-69
 Identities = 116/185 (62%), Positives = 151/185 (81%)
 Frame = +2

Query: 8   DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 187
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 188 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 367
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 61  LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120

Query: 368 FLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDD 547
           ++  DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI +  LLV+GDD
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDD 180

Query: 548 NTGMT 562
           N+  T
Sbjct: 181 NSAFT 185

[6][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  264 bits (675), Expect = 3e-69
 Identities = 115/187 (61%), Positives = 152/187 (81%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
           +DD+FI +E  +TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y ++F++DWS +D
Sbjct: 316 MDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFD 375

Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
           QRLPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN
Sbjct: 376 QRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNN 435

Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
           + ++  DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI +  LLV+G
Sbjct: 436 LVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMG 495

Query: 542 DDNTGMT 562
           DDN+  T
Sbjct: 496 DDNSAFT 502

[7][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  249 bits (635), Expect = 1e-64
 Identities = 108/188 (57%), Positives = 148/188 (78%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
           VDD+F+ IE MLTFP  + ARKP CCIMYGLETIRGSN+ +++IA DY +FF++DWS +D
Sbjct: 313 VDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQILDKIASDYKSFFTIDWSGFD 372

Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
           QRLP VI  +++T+++  L+V+NHGY PTYEYP+YPDL  + +  R+ NL+ FL TWY N
Sbjct: 373 QRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFN 432

Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
           M F+  DG++Y R   G+PSG+ NTQ+LDSFGNLFL+ID ++EFG T++EI+  +L ++G
Sbjct: 433 MVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMG 492

Query: 542 DDNTGMTT 565
           DDN+  TT
Sbjct: 493 DDNSAFTT 500

[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  206 bits (524), Expect = 1e-51
 Identities = 96/187 (51%), Positives = 135/187 (72%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
           VD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN  ++ +A+ + +F ++DWS YD
Sbjct: 344 VDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNIKLDSLAQGFISFATIDWSGYD 403

Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
           QRLP  I   ++  +L SL++I+HGY PT EY     ++   ++ R  NL++F  TWY N
Sbjct: 404 QRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFN 462

Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
           M FL  DG+A+RR   G+PSG+  TQ+LDSFGNL+LIID++LEFG T  +I+  +L ++G
Sbjct: 463 MVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMG 522

Query: 542 DDNTGMT 562
           DDN+  T
Sbjct: 523 DDNSIFT 529

[9][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  167 bits (423), Expect = 5e-40
 Identities = 82/201 (40%), Positives = 124/201 (61%), Gaps = 21/201 (10%)
 Frame = +2

Query: 11  IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
           IF+ IE ML +PL  Q RK  C IMYGLETIRG    IE +A  +S F  +DWS +DQ +
Sbjct: 284 IFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSKFDQTV 343

Query: 191 PRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK----- 307
           P  + D++Y D++ +LI+++ GY   + Y  +                 +L+E       
Sbjct: 344 PFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNEAPPETAI 403

Query: 308 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 487
             ++++NLL F++TW+  M ++ PDG+AYRRT  G+PSG+  TQ +DSF NL ++ID++ 
Sbjct: 404 FANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLF 463

Query: 488 EFGFTNSEIERFILLVLGDDN 550
           EFGF  S+I   ++L++GDDN
Sbjct: 464 EFGFHESDITSALILLMGDDN 484

[10][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  167 bits (422), Expect = 7e-40
 Identities = 82/201 (40%), Positives = 124/201 (61%), Gaps = 21/201 (10%)
 Frame = +2

Query: 11  IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
           IF+ IE ML +PL  Q RK  C IMYG ETIRG    IE +A  +S F  +DWS +DQ +
Sbjct: 284 IFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMMEIESLATRFSNFMMIDWSKFDQTV 343

Query: 191 PRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK----- 307
           P  + D++Y D++ +LI+I+ GY   + Y  +                 +L+E       
Sbjct: 344 PFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNEAPPEASV 403

Query: 308 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 487
             ++++NLL F++TW+  M ++ PDG+AYRRT  G+PSG+  TQ +DSF NL ++ID++ 
Sbjct: 404 FANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLF 463

Query: 488 EFGFTNSEIERFILLVLGDDN 550
           EFGF  S+I+  ++L++GDDN
Sbjct: 464 EFGFHESDIKSALILLMGDDN 484

[11][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  166 bits (421), Expect = 9e-40
 Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 23/207 (11%)
 Frame = +2

Query: 11  IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
           I+I IE ML +PL  QARK  CCIMYGLETIRG    +E+I+  +++F  +DWS +D   
Sbjct: 280 IYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMNELERISNAFNSFLLIDWSRFDHLA 339

Query: 191 PRVITDIYYTDFLRSLIVINHGYQP-----------------------TYEYPTYPDLDE 301
           P  I++ ++  +L + I+I+HGY                         + EY T P+   
Sbjct: 340 PFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSFSAQAQSHGIPMISKEYQTPPEATV 399

Query: 302 HKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDA 481
                ++ NL+ FL  WY +M F+ PDG+AYRRT  G+PSG+  TQ++DSF NL +++D 
Sbjct: 400 FA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDSFVNLTILLDG 457

Query: 482 MLEFGFTNSEIERFILLVLGDDNTGMT 562
           ++EFGFT+ EI++ ++ ++GDDN   T
Sbjct: 458 LIEFGFTDEEIKQLLVFIMGDDNVIFT 484

[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/201 (40%), Positives = 124/201 (61%), Gaps = 21/201 (10%)
 Frame = +2

Query: 11  IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
           IF+ IE ML +PL  Q RK  C IMYGLETIRG    IE +A  +S F  +DWS +DQ +
Sbjct: 284 IFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSKFDQTV 343

Query: 191 PRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK----- 307
           P  + D++Y D++ +LI+++ GY   + Y  +                 +L+E       
Sbjct: 344 PFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGDSNLNEAPPEAAV 403

Query: 308 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 487
             ++++NLL F++TW+  M ++ PDG+AY RT  G+PSG+  TQ +DSF NL ++ID++ 
Sbjct: 404 FANKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLF 463

Query: 488 EFGFTNSEIERFILLVLGDDN 550
           EFGF  S+I+  ++L++GDDN
Sbjct: 464 EFGFHESDIKSALILLMGDDN 484

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score =  137 bits (346), Expect = 5e-31
 Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 31/211 (14%)
 Frame = +2

Query: 11  IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
           +F+++E MLT  L  Q RKP  CI++  ETIRG    + +I+ +++ F   D+S +DQ  
Sbjct: 307 LFLMLEAMLTLGLMAQCRKPDNCILWSYETIRGGMHELHRISTEFNVFMGFDYSRFDQLA 366

Query: 191 PRVITDIYYTDFLRSLIVINHGYQPT--YEYPTYPDLDEHKLYHRMD------------- 325
           P  I   ++  F+  +I ++ GYQ +  Y    Y   D  K Y  +D             
Sbjct: 367 PFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQYA-YDFEKKYDNLDKSEPKFQEFAKKS 425

Query: 326 ----------------NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFG 457
                           N+L F+  WY  M F+ PDGY Y R   G+PSG++ TQ LDSF 
Sbjct: 426 NNLFPKHVVAFSFVIFNILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFV 485

Query: 458 NLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           NLF+ +DA+LEFGF+  +I+ F L + GDDN
Sbjct: 486 NLFIFVDALLEFGFSIDQIKCFRLFIQGDDN 516

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
 Frame = +2

Query: 17  IIIELMLTFPLTIQ--ARKPSCCIMYGLETIRGSNRYIEQIARD----YSTFFSLDWSSY 178
           ++ ELM  +PL +   AR P   +++G ET+ G    +   A D    YST  +LDWS +
Sbjct: 232 LMAELMFIWPLQVSLLARGPQSPMLWGYETLTGGWSRLFSWASDTMPRYSTVLTLDWSRF 291

Query: 179 DQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN 358
           D+     +    +   +R +     GY PT  YP  PD +      R++NL +++     
Sbjct: 292 DKDARHTVIRDIHAMIMRPMFTFTEGYHPTISYPNAPDTNP----DRLENLWNWMTDAIL 347

Query: 359 NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVL 538
            +  +LPDG   +    GI SG + TQ LDS  N  +I   +   GF   ++++F + V 
Sbjct: 348 TVPLMLPDGQLLQFNHSGIYSGYFQTQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQ 404

Query: 539 GDDN 550
           GDD+
Sbjct: 405 GDDS 408

[15][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
 Frame = +2

Query: 158 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP--TYPDLDEHKLYHRMDNL 331
           +LDWS +D+     +    +T  +R      +GY PT+ YP  T  D DE  +  R++NL
Sbjct: 324 TLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNGYHPTHRYPISTDVDADEQPVSTRLENL 383

Query: 332 LHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSE 511
            +++      +  L+PDG   R T  GI SG   TQ LDS  N+ +I   +   GF   +
Sbjct: 384 WNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYMQTQILDSLYNMVMIFTMVSRLGF---D 440

Query: 512 IERFILLVLGDDNTGM 559
           +++ ++ V GDD+  M
Sbjct: 441 LDKVVIKVQGDDSIFM 456

[16][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
           1 RepID=Q52UL1_9VIRU
          Length = 573

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
 Frame = +2

Query: 80  IMYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVI 247
           +++  ET+ G     N    Q  + + T F+LDWS +D R+   + D    D ++S    
Sbjct: 232 LLWNYETLNGGWYRLNDEFYQQWQSFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCF 290

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 427
              Y PT  YPT     +     R+ NL +++ T Y +       G  YRR   G+PSG+
Sbjct: 291 CGNYCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGI 345

Query: 428 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDD 547
           + TQ+ DSF N  +++  +   GF  +  +R+ L VLGDD
Sbjct: 346 FCTQFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDD 383

[17][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETIRGS----NRYIEQIARDYSTFFSLD 166
           V  + +++E M  +PL    R +    +++G ET+ G     N  +        +  SLD
Sbjct: 224 VPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETMLGGWYKLNHELHLNPFYQGSILSLD 283

Query: 167 WSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFL 343
           WS +D R L  VI D+Y    ++S    N+GY PT +YP   D   H    ++ NL  ++
Sbjct: 284 WSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPTVDYP---DSSTHP--QKLHNLWDWM 338

Query: 344 HTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERF 523
            T        L DG  ++RT  GI SG + TQ++DS  N  +I+  +   GF     E  
Sbjct: 339 LTALKFAPCALADGTIWQRTVRGIASGQFTTQFMDSIYNGLMILTILSRMGFVID--ETL 396

Query: 524 ILLVLGDDNTGMTTIPI 574
            + +LGDD+     + I
Sbjct: 397 PIKLLGDDSVTRLAVSI 413

[18][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 74.7 bits (182), Expect = 5e-12
 Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
 Frame = +2

Query: 149 TFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMD 325
           +F +LDWS +D+R    ++  I YT   R+ +  + GY PT+  PT+P  D  K   R++
Sbjct: 309 SFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTHSAPTHPQWDHTKAI-RLE 365

Query: 326 NLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 499
            L  +L T  N      +LPDG  YRR   GIPSGL+ TQ LDS+ N  ++   +   GF
Sbjct: 366 RL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATLLSALGF 423

Query: 500 TNSEIERFILLVLGDDN 550
              + +  I+ V GDD+
Sbjct: 424 ---DPKHCIIKVQGDDS 437

[19][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
 Frame = +2

Query: 149 TFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMD 325
           +F +LDWS +D+R    ++  I YT   R+ +  + GY PT+  PT+P  D  K      
Sbjct: 253 SFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTHSAPTHPQWDHTKAIRHER 310

Query: 326 NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 505
             L  L   +     +LPDG  YRR   GIPSGL+ TQ LDS+ N  ++   +   GF  
Sbjct: 311 LWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQSLDSWYNYTMLATLLSALGF-- 367

Query: 506 SEIERFILLVLGDDN 550
            + +  I+ V GDD+
Sbjct: 368 -DPKHCIIKVQGDDS 381

[20][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
           mycovirus RepID=Q8B0U3_9VIRU
          Length = 598

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
 Frame = +2

Query: 80  IMYGLETIRGS--NRYIEQIARD--YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIV 244
           +++G ETI G   N Y+E I     +STF  +DWSS+D R L  +I    + ++ R+   
Sbjct: 259 LLWGNETILGGGLNLYMECIIPRLYFSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFD 317

Query: 245 INHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 424
             +GY PT +Y        H     ++ L +++      M   LPDG  Y+R   GIPSG
Sbjct: 318 FENGYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSG 372

Query: 425 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           L+ TQ+LDSF N+ +I+  +   GF  S +    + V GDD+
Sbjct: 373 LFTTQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDS 411

[21][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
 Frame = +2

Query: 80  IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
           +++G ET  G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +  
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
             GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395

Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           PSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437

[22][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
 Frame = +2

Query: 80  IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
           +++G ET  G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +  
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
             GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395

Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           PSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437

[23][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
 Frame = +2

Query: 80  IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
           +++G ET  G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +  
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
             GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395

Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           PSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437

[24][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
 Frame = +2

Query: 80  IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
           +++G ET  G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +  
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
             GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395

Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           PSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437

[25][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 72.0 bits (175), Expect = 3e-11
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
 Frame = +2

Query: 80  IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
           +++G ET  G    + Q+        +F +LDWS +D+R    ++  I YT  ++S +  
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
             GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR   GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395

Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           PSGL+ TQ  DS+ N  ++   +   GF  S     I+ V GDD+
Sbjct: 396 PSGLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437

[26][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
 Frame = +2

Query: 14  FIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDW 169
           +II E ML +     I+    +  +++G ET  G         Y   I     +F +LDW
Sbjct: 259 WIIAETMLYWEYIAWIKLNPGTTPMLWGYETFTGGWFRLNHQLYCGMIKH---SFLTLDW 315

Query: 170 SSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLH 346
           S +D+R    ++  I Y   +RS +  + GY PT+  P +P  +  K   R++ L  +L 
Sbjct: 316 SRFDKRAYFPLLRRILYP--VRSFLTFDEGYVPTHAAPYHPQWNHEKAL-RLERL--WLW 370

Query: 347 TWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER 520
           T  N      +LPDG  YRR   GIPSGL+ TQ LDS+ N  ++   +   GF   + ++
Sbjct: 371 TLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILSALGF---DPKQ 427

Query: 521 FILLVLGDDNTGMTTIPI 574
            I+ V GDD+    T+ I
Sbjct: 428 CIIKVQGDDSIIRLTVLI 445

[27][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
           RepID=Q5XM56_9VIRU
          Length = 573

 Score = 71.2 bits (173), Expect = 5e-11
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 5/181 (2%)
 Frame = +2

Query: 17  IIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYD 181
           I  E M ++PL +         +++  ET+ G     N    Q  + + T F+LDWS +D
Sbjct: 210 IFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQSFCTIFNLDWSEFD 269

Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
            R+   + D    D ++S       Y PT   PT     +     R+ NL +++ T Y +
Sbjct: 270 MRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----RLQNLWNWIGTAYKD 323

Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
                  G  YRR   G+PSG++ TQ+ DSF N  +++  +   GF  +  +R+ L VLG
Sbjct: 324 TPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLG 381

Query: 542 D 544
           D
Sbjct: 382 D 382

[28][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
           insulare T-type partitivirus RepID=C1KDH6_9VIRU
          Length = 585

 Score = 68.9 bits (167), Expect = 3e-10
 Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
 Frame = +2

Query: 17  IIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYIEQ---IARDYS-TFFSLDWSSYD 181
           I+ + M  +PL      + +  +++G ET  G    I     + R YS T+ ++DWS +D
Sbjct: 235 ILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLYSQTYLTVDWSGFD 294

Query: 182 QR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFL 343
            R    + R I D +  Y DF          Y PT    TYPD     +  RM+ L ++ 
Sbjct: 295 LRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDPI--RMERLWNWQ 341

Query: 344 HTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERF 523
                 M F+LPD   Y R    IPSGL+ TQ+LDS  NL +I   +   GF   +I   
Sbjct: 342 RDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILSAMGF---DITNL 398

Query: 524 ILLVLGDDN 550
           ++LV GDD+
Sbjct: 399 MILVQGDDS 407

[29][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
           cryptic virus 1 RepID=B7ZGY8_9VIRU
          Length = 587

 Score = 67.8 bits (164), Expect = 6e-10
 Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
 Frame = +2

Query: 80  IMYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIV 244
           +++G ET+ G     N  +        +   LDW  +D   L  V  DI    +  S   
Sbjct: 256 LLWGYETMTGGWYRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFD 313

Query: 245 INHGYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPS 421
            +HGYQPT +Y  T  D D      R+ NL  ++          LPDG  +RR+  G+PS
Sbjct: 314 CSHGYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPS 367

Query: 422 GLYNTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
           GL+ TQ+LDS  N   +F I+DAM  F  T+      I+ VLGDD+
Sbjct: 368 GLFITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS 408

[30][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
 Frame = +2

Query: 149 TFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMD 325
           +F +LDWS +D+R    ++  I YT  +++ +    GY PT+  PT+P   +  +  R++
Sbjct: 309 SFLTLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLE 365

Query: 326 NLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 499
            L  +L T  N      +LPDG  YRR   GIPSGL+ TQ LDS+ N  ++   +    F
Sbjct: 366 RL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILSALHF 423

Query: 500 TNSEIERFILLVLGDDN 550
              +    I+ V GDD+
Sbjct: 424 ---DPLHCIIKVQGDDS 437

[31][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
           partitivirus S RepID=C7ENF4_9VIRU
          Length = 580

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
 Frame = +2

Query: 80  IMYGLETIRGSNRYIE---QIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVI 247
           +++G E ++G  + +    Q  R   T  SLDWS +D+R L  VI D++     +S    
Sbjct: 245 LLWGNEIMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDF 302

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 427
            H Y+PT  Y      + H+   R++NL  ++     +   L PDG  Y+ T  GI SG 
Sbjct: 303 TH-YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGF 358

Query: 428 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
             TQ LDSF N+ +++  +   G  N E   F + V GDD+
Sbjct: 359 QQTQLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDS 398

[32][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-2 RepID=Q6BE42_9VIRU
          Length = 538

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
 Frame = +2

Query: 2   VDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYI--EQIARD--YSTFFSLD 166
           V    I  E M  +PL +I     +  +++  E++ G    +  E  AR   YS  F+LD
Sbjct: 161 VPKYLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMYSPIFNLD 220

Query: 167 WSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------HKLY---- 313
           WS +D R       +Y+T +   +  ++  +     Y PT P LDE      H  Y    
Sbjct: 221 WSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLHPPYSEPF 273

Query: 314 ---HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAM 484
               R+ NL  ++   Y NM  +   G  ++R+  G+PSG++ TQ+ DSF N  +I+  +
Sbjct: 274 TNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNAVIIVTCL 333

Query: 485 LEFGFTNSEIER-FILLVLGDD 547
           L  G+   E+    ++ ++GDD
Sbjct: 334 LALGY---EVRHDHLIKLMGDD 352

[33][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
           disease-associated mycovirus RepID=Q65A75_9VIRU
          Length = 621

 Score = 63.9 bits (154), Expect = 8e-09
 Identities = 38/134 (28%), Positives = 68/134 (50%)
 Frame = +2

Query: 149 TFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDN 328
           ++ +LDW  +D++    I D  + D + + +  ++GY PT +YP        +   R+  
Sbjct: 311 SYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPDTKSTWTQERSTRLKR 369

Query: 329 LLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNS 508
           L  +    + +   +LP+G+ Y R   GIPSGL+ TQ +DS+ N  ++   +   GF   
Sbjct: 370 LFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDSWYNYTMLATILSAMGF--- 426

Query: 509 EIERFILLVLGDDN 550
           +    I+ V GDD+
Sbjct: 427 DPRSCIIKVQGDDS 440

[34][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
           associated partitivirus RepID=Q65A70_9VIRU
          Length = 621

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 38/134 (28%), Positives = 67/134 (50%)
 Frame = +2

Query: 149 TFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDN 328
           ++ +LDW  +D++    I D  + D + + +  ++GY PT +YP            R+  
Sbjct: 311 SYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPDTKSTWTQGRSTRIKR 369

Query: 329 LLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNS 508
           L  +    + +   +LP+G+ Y R   GIPSGL+ TQ +DS+ N  ++   +   GF   
Sbjct: 370 LFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDSWYNYTMLATILSAMGF--- 426

Query: 509 EIERFILLVLGDDN 550
           +    I+ V GDD+
Sbjct: 427 DPRSCIIKVQGDDS 440

[35][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
           Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
          Length = 367

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
 Frame = +2

Query: 149 TFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPTYEYP---TYPDLDEHKLYH 316
           T+ ++DWS +D+R    +I  I+     R      +GY PT +YP   T+PD        
Sbjct: 80  TYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPTKDYPFSPTHPD-------- 129

Query: 317 RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 496
           ++  L  +    + +   +LP+G+ Y+R   GIPSGL+ TQ +DS+ N  ++   +    
Sbjct: 130 KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQLMDSWYNYVMLCSIL---H 186

Query: 497 FTNSEIERFILLVLGDDN 550
           + + + +  I+ V GDD+
Sbjct: 187 YMDIDPKTCIIKVQGDDS 204

[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
           isometric virus RepID=B7X9J3_9VIRU
          Length = 587

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
 Frame = +2

Query: 80  IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVI 247
           +++G E + G  R + +     R  +T  SLDWS +D+R L  VI D++  D  RS    
Sbjct: 250 LLWGNEMMSGGWRKLNRTIYNGRTVNTVLSLDWSQFDKRALHEVIDDVH--DIWRSYFDF 307

Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 427
           +  Y PT  YP  P  DE     R++NL  ++          L  G   +    GI SG 
Sbjct: 308 SF-YMPTSFYPNAP-TDE----SRLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGF 361

Query: 428 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFI 526
             TQ LDSF N+ +I+  +   G   +  + FI
Sbjct: 362 QQTQLLDSFVNMIMILTCLSRAGVNINSKDFFI 394