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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 361 bits (927), Expect = 2e-98
Identities = 170/191 (89%), Positives = 180/191 (94%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSSYD
Sbjct: 332 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYD 391
Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNN
Sbjct: 392 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNN 451
Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
MTFLLPDGYAYRRT CG+PSGLYNTQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG
Sbjct: 452 MTFLLPDGYAYRRTHCGVPSGLYNTQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILG 511
Query: 542 DDNTGMTTIPI 574
DNTGMT + I
Sbjct: 512 GDNTGMTNLAI 522
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 284 bits (727), Expect = 3e-75
Identities = 130/195 (66%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIRGSNRYIEQIARDYSTFFSLDW 169
VDD FI+ ELM++FPL + AR P CIMY ETIRGSNRY++ IARD+ +FF++DW
Sbjct: 317 VDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIRGSNRYLDSIARDFISFFTIDW 376
Query: 170 SSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHT 349
SS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFLHT
Sbjct: 377 SSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHT 436
Query: 350 WYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFIL 529
WYNNM F+ DG+AY R+ G+PSGL NTQYLDSF NLFLIID + EFGFT +EI +
Sbjct: 437 WYNNMVFVTADGFAYLRSAAGVPSGLLNTQYLDSFCNLFLIIDGLFEFGFTQAEILSIVF 496
Query: 530 LVLGDDNTGMTTIPI 574
++GDDN+G T + I
Sbjct: 497 FIMGDDNSGFTMMDI 511
[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 275 bits (702), Expect = 2e-72
Identities = 122/187 (65%), Positives = 151/187 (80%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
VDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN +I+ A+ + ++F++DWS YD
Sbjct: 317 VDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYD 376
Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
QRLPR ITD+YYTDFL SLI+IN GYQPT +Y YPDL ++ RM NLLHFLHTWYNN
Sbjct: 377 QRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNN 436
Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
M ++ DG+AY R CG+PSGL+NTQYLDSFGNL+LIID MLEFG + EI +LL++G
Sbjct: 437 MVYVTADGFAYIRKFCGVPSGLFNTQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMG 496
Query: 542 DDNTGMT 562
DDN+G T
Sbjct: 497 DDNSGFT 503
[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 270 bits (691), Expect = 5e-71
Identities = 119/187 (63%), Positives = 153/187 (81%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
+DD+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I++IA + +FF++DWS +D
Sbjct: 316 MDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKIASSFRSFFTIDWSGFD 375
Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
QRLPRVITDI+++DFL +IVI+HGYQPTY+YP+YPDL K++ RMDN+L FLHTWYNN
Sbjct: 376 QRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNN 435
Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
+ F+ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+G
Sbjct: 436 LVFVTADGFAYIRTCAGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMG 495
Query: 542 DDNTGMT 562
DDN+ T
Sbjct: 496 DDNSAFT 502
[5][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 265 bits (677), Expect = 2e-69
Identities = 116/185 (62%), Positives = 151/185 (81%)
Frame = +2
Query: 8 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 187
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 188 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 367
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120
Query: 368 FLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDD 547
++ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+GDD
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDD 180
Query: 548 NTGMT 562
N+ T
Sbjct: 181 NSAFT 185
[6][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 264 bits (675), Expect = 3e-69
Identities = 115/187 (61%), Positives = 152/187 (81%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
+DD+FI +E +TFPL + ARK CCIMYG ETIRGSNR I+++A +Y ++F++DWS +D
Sbjct: 316 MDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFD 375
Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
QRLPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN
Sbjct: 376 QRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNN 435
Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
+ ++ DG+AY RTC G+PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+G
Sbjct: 436 LVYVTADGFAYIRTCTGVPSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMG 495
Query: 542 DDNTGMT 562
DDN+ T
Sbjct: 496 DDNSAFT 502
[7][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 249 bits (635), Expect = 1e-64
Identities = 108/188 (57%), Positives = 148/188 (78%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
VDD+F+ IE MLTFP + ARKP CCIMYGLETIRGSN+ +++IA DY +FF++DWS +D
Sbjct: 313 VDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQILDKIASDYKSFFTIDWSGFD 372
Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
QRLP VI +++T+++ L+V+NHGY PTYEYP+YPDL + + R+ NL+ FL TWY N
Sbjct: 373 QRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFN 432
Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
M F+ DG++Y R G+PSG+ NTQ+LDSFGNLFL+ID ++EFG T++EI+ +L ++G
Sbjct: 433 MVFVTADGFSYVREHAGVPSGMLNTQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMG 492
Query: 542 DDNTGMTT 565
DDN+ TT
Sbjct: 493 DDNSAFTT 500
[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 206 bits (524), Expect = 1e-51
Identities = 96/187 (51%), Positives = 135/187 (72%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYD 181
VD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN ++ +A+ + +F ++DWS YD
Sbjct: 344 VDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNIKLDSLAQGFISFATIDWSGYD 403
Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
QRLP I ++ +L SL++I+HGY PT EY ++ ++ R NL++F TWY N
Sbjct: 404 QRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFN 462
Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
M FL DG+A+RR G+PSG+ TQ+LDSFGNL+LIID++LEFG T +I+ +L ++G
Sbjct: 463 MVFLSADGFAFRRQFAGVPSGMLLTQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMG 522
Query: 542 DDNTGMT 562
DDN+ T
Sbjct: 523 DDNSIFT 529
[9][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 167 bits (423), Expect = 5e-40
Identities = 82/201 (40%), Positives = 124/201 (61%), Gaps = 21/201 (10%)
Frame = +2
Query: 11 IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
IF+ IE ML +PL Q RK C IMYGLETIRG IE +A +S F +DWS +DQ +
Sbjct: 284 IFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSKFDQTV 343
Query: 191 PRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK----- 307
P + D++Y D++ +LI+++ GY + Y + +L+E
Sbjct: 344 PFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNEAPPETAI 403
Query: 308 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 487
++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++
Sbjct: 404 FANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLF 463
Query: 488 EFGFTNSEIERFILLVLGDDN 550
EFGF S+I ++L++GDDN
Sbjct: 464 EFGFHESDITSALILLMGDDN 484
[10][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 167 bits (422), Expect = 7e-40
Identities = 82/201 (40%), Positives = 124/201 (61%), Gaps = 21/201 (10%)
Frame = +2
Query: 11 IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
IF+ IE ML +PL Q RK C IMYG ETIRG IE +A +S F +DWS +DQ +
Sbjct: 284 IFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMMEIESLATRFSNFMMIDWSKFDQTV 343
Query: 191 PRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK----- 307
P + D++Y D++ +LI+I+ GY + Y + +L+E
Sbjct: 344 PFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSFAAQARKLGVHGNSNLNEAPPEASV 403
Query: 308 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 487
++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++
Sbjct: 404 FANKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLF 463
Query: 488 EFGFTNSEIERFILLVLGDDN 550
EFGF S+I+ ++L++GDDN
Sbjct: 464 EFGFHESDIKSALILLMGDDN 484
[11][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 166 bits (421), Expect = 9e-40
Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 23/207 (11%)
Frame = +2
Query: 11 IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
I+I IE ML +PL QARK CCIMYGLETIRG +E+I+ +++F +DWS +D
Sbjct: 280 IYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMNELERISNAFNSFLLIDWSRFDHLA 339
Query: 191 PRVITDIYYTDFLRSLIVINHGYQP-----------------------TYEYPTYPDLDE 301
P I++ ++ +L + I+I+HGY + EY T P+
Sbjct: 340 PFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSFSAQAQSHGIPMISKEYQTPPEATV 399
Query: 302 HKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDA 481
++ NL+ FL WY +M F+ PDG+AYRRT G+PSG+ TQ++DSF NL +++D
Sbjct: 400 FA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDSFVNLTILLDG 457
Query: 482 MLEFGFTNSEIERFILLVLGDDNTGMT 562
++EFGFT+ EI++ ++ ++GDDN T
Sbjct: 458 LIEFGFTDEEIKQLLVFIMGDDNVIFT 484
[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 166 bits (419), Expect = 2e-39
Identities = 81/201 (40%), Positives = 124/201 (61%), Gaps = 21/201 (10%)
Frame = +2
Query: 11 IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
IF+ IE ML +PL Q RK C IMYGLETIRG IE +A +S F +DWS +DQ +
Sbjct: 284 IFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSKFDQTV 343
Query: 191 PRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------PDLDEHK----- 307
P + D++Y D++ +LI+++ GY + Y + +L+E
Sbjct: 344 PFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGDSNLNEAPPEAAV 403
Query: 308 LYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAML 487
++++NLL F++TW+ M ++ PDG+AY RT G+PSG+ TQ +DSF NL ++ID++
Sbjct: 404 FANKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLF 463
Query: 488 EFGFTNSEIERFILLVLGDDN 550
EFGF S+I+ ++L++GDDN
Sbjct: 464 EFGFHESDIKSALILLMGDDN 484
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 137 bits (346), Expect = 5e-31
Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 31/211 (14%)
Frame = +2
Query: 11 IFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRL 190
+F+++E MLT L Q RKP CI++ ETIRG + +I+ +++ F D+S +DQ
Sbjct: 307 LFLMLEAMLTLGLMAQCRKPDNCILWSYETIRGGMHELHRISTEFNVFMGFDYSRFDQLA 366
Query: 191 PRVITDIYYTDFLRSLIVINHGYQPT--YEYPTYPDLDEHKLYHRMD------------- 325
P I ++ F+ +I ++ GYQ + Y Y D K Y +D
Sbjct: 367 PFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQYA-YDFEKKYDNLDKSEPKFQEFAKKS 425
Query: 326 ----------------NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFG 457
N+L F+ WY M F+ PDGY Y R G+PSG++ TQ LDSF
Sbjct: 426 NNLFPKHVVAFSFVIFNILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFV 485
Query: 458 NLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
NLF+ +DA+LEFGF+ +I+ F L + GDDN
Sbjct: 486 NLFIFVDALLEFGFSIDQIKCFRLFIQGDDN 516
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 89.7 bits (221), Expect = 1e-16
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Frame = +2
Query: 17 IIIELMLTFPLTIQ--ARKPSCCIMYGLETIRGSNRYIEQIARD----YSTFFSLDWSSY 178
++ ELM +PL + AR P +++G ET+ G + A D YST +LDWS +
Sbjct: 232 LMAELMFIWPLQVSLLARGPQSPMLWGYETLTGGWSRLFSWASDTMPRYSTVLTLDWSRF 291
Query: 179 DQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN 358
D+ + + +R + GY PT YP PD + R++NL +++
Sbjct: 292 DKDARHTVIRDIHAMIMRPMFTFTEGYHPTISYPNAPDTNP----DRLENLWNWMTDAIL 347
Query: 359 NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVL 538
+ +LPDG + GI SG + TQ LDS N +I + GF ++++F + V
Sbjct: 348 TVPLMLPDGQLLQFNHSGIYSGYFQTQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQ 404
Query: 539 GDDN 550
GDD+
Sbjct: 405 GDDS 408
[15][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 76.3 bits (186), Expect = 2e-12
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Frame = +2
Query: 158 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYP--TYPDLDEHKLYHRMDNL 331
+LDWS +D+ + +T +R +GY PT+ YP T D DE + R++NL
Sbjct: 324 TLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNGYHPTHRYPISTDVDADEQPVSTRLENL 383
Query: 332 LHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSE 511
+++ + L+PDG R T GI SG TQ LDS N+ +I + GF +
Sbjct: 384 WNWMTDAVLTVPLLMPDGTMIRFTHSGIYSGYMQTQILDSLYNMVMIFTMVSRLGF---D 440
Query: 512 IERFILLVLGDDNTGM 559
+++ ++ V GDD+ M
Sbjct: 441 LDKVVIKVQGDDSIFM 456
[16][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
1 RepID=Q52UL1_9VIRU
Length = 573
Score = 76.3 bits (186), Expect = 2e-12
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Frame = +2
Query: 80 IMYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVI 247
+++ ET+ G N Q + + T F+LDWS +D R+ + D D ++S
Sbjct: 232 LLWNYETLNGGWYRLNDEFYQQWQSFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCF 290
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 427
Y PT YPT + R+ NL +++ T Y + G YRR G+PSG+
Sbjct: 291 CGNYCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGI 345
Query: 428 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDD 547
+ TQ+ DSF N +++ + GF + +R+ L VLGDD
Sbjct: 346 FCTQFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDD 383
[17][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 75.5 bits (184), Expect = 3e-12
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETIRGS----NRYIEQIARDYSTFFSLD 166
V + +++E M +PL R + +++G ET+ G N + + SLD
Sbjct: 224 VPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETMLGGWYKLNHELHLNPFYQGSILSLD 283
Query: 167 WSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFL 343
WS +D R L VI D+Y ++S N+GY PT +YP D H ++ NL ++
Sbjct: 284 WSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPTVDYP---DSSTHP--QKLHNLWDWM 338
Query: 344 HTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERF 523
T L DG ++RT GI SG + TQ++DS N +I+ + GF E
Sbjct: 339 LTALKFAPCALADGTIWQRTVRGIASGQFTTQFMDSIYNGLMILTILSRMGFVID--ETL 396
Query: 524 ILLVLGDDNTGMTTIPI 574
+ +LGDD+ + I
Sbjct: 397 PIKLLGDDSVTRLAVSI 413
[18][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 74.7 bits (182), Expect = 5e-12
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Frame = +2
Query: 149 TFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMD 325
+F +LDWS +D+R ++ I YT R+ + + GY PT+ PT+P D K R++
Sbjct: 309 SFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTHSAPTHPQWDHTKAI-RLE 365
Query: 326 NLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 499
L +L T N +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 366 RL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATLLSALGF 423
Query: 500 TNSEIERFILLVLGDDN 550
+ + I+ V GDD+
Sbjct: 424 ---DPKHCIIKVQGDDS 437
[19][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 73.9 bits (180), Expect = 8e-12
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 149 TFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMD 325
+F +LDWS +D+R ++ I YT R+ + + GY PT+ PT+P D K
Sbjct: 253 SFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGYVPTHSAPTHPQWDHTKAIRHER 310
Query: 326 NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 505
L L + +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF
Sbjct: 311 LWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLFITQSLDSWYNYTMLATLLSALGF-- 367
Query: 506 SEIERFILLVLGDDN 550
+ + I+ V GDD+
Sbjct: 368 -DPKHCIIKVQGDDS 381
[20][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
mycovirus RepID=Q8B0U3_9VIRU
Length = 598
Score = 73.6 bits (179), Expect = 1e-11
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 5/162 (3%)
Frame = +2
Query: 80 IMYGLETIRGS--NRYIEQIARD--YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIV 244
+++G ETI G N Y+E I +STF +DWSS+D R L +I + ++ R+
Sbjct: 259 LLWGNETILGGGLNLYMECIIPRLYFSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFD 317
Query: 245 INHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 424
+GY PT +Y H ++ L +++ M LPDG Y+R GIPSG
Sbjct: 318 FENGYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSG 372
Query: 425 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
L+ TQ+LDSF N+ +I+ + GF S + + V GDD+
Sbjct: 373 LFTTQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDS 411
[21][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 73.6 bits (179), Expect = 1e-11
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Frame = +2
Query: 80 IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
+++G ET G + Q+ +F +LDWS +D+R ++ I YT ++S +
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
GY PT+ P +P ++ K + L L W F +LPDG YRR GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395
Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
PSGL+ TQ LDS+ N ++ + GF S I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437
[22][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 73.6 bits (179), Expect = 1e-11
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Frame = +2
Query: 80 IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
+++G ET G + Q+ +F +LDWS +D+R ++ I YT ++S +
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
GY PT+ P +P ++ K + L L W F +LPDG YRR GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395
Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
PSGL+ TQ LDS+ N ++ + GF S I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437
[23][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 73.6 bits (179), Expect = 1e-11
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Frame = +2
Query: 80 IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
+++G ET G + Q+ +F +LDWS +D+R ++ I YT ++S +
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
GY PT+ P +P ++ K + L L W F +LPDG YRR GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395
Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
PSGL+ TQ LDS+ N ++ + GF S I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437
[24][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 73.6 bits (179), Expect = 1e-11
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Frame = +2
Query: 80 IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
+++G ET G + Q+ +F +LDWS +D+R ++ I YT ++S +
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
GY PT+ P +P ++ K + L L W F +LPDG YRR GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395
Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
PSGL+ TQ LDS+ N ++ + GF S I+ V GDD+
Sbjct: 396 PSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437
[25][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 72.0 bits (175), Expect = 3e-11
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 8/165 (4%)
Frame = +2
Query: 80 IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVI 247
+++G ET G + Q+ +F +LDWS +D+R ++ I YT ++S +
Sbjct: 283 MLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLRKIMYT--VKSFLTF 340
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTCCGI 415
GY PT+ P +P ++ K + L L W F +LPDG YRR GI
Sbjct: 341 EEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHFAGI 395
Query: 416 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
PSGL+ TQ DS+ N ++ + GF S I+ V GDD+
Sbjct: 396 PSGLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDS 437
[26][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 71.6 bits (174), Expect = 4e-11
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Frame = +2
Query: 14 FIIIELMLTFPLT--IQARKPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDW 169
+II E ML + I+ + +++G ET G Y I +F +LDW
Sbjct: 259 WIIAETMLYWEYIAWIKLNPGTTPMLWGYETFTGGWFRLNHQLYCGMIKH---SFLTLDW 315
Query: 170 SSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLH 346
S +D+R ++ I Y +RS + + GY PT+ P +P + K R++ L +L
Sbjct: 316 SRFDKRAYFPLLRRILYP--VRSFLTFDEGYVPTHAAPYHPQWNHEKAL-RLERL--WLW 370
Query: 347 TWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER 520
T N +LPDG YRR GIPSGL+ TQ LDS+ N ++ + GF + ++
Sbjct: 371 TLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILSALGF---DPKQ 427
Query: 521 FILLVLGDDNTGMTTIPI 574
I+ V GDD+ T+ I
Sbjct: 428 CIIKVQGDDSIIRLTVLI 445
[27][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
RepID=Q5XM56_9VIRU
Length = 573
Score = 71.2 bits (173), Expect = 5e-11
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 5/181 (2%)
Frame = +2
Query: 17 IIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYD 181
I E M ++PL + +++ ET+ G N Q + + T F+LDWS +D
Sbjct: 210 IFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQSFCTIFNLDWSEFD 269
Query: 182 QRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNN 361
R+ + D D ++S Y PT PT + R+ NL +++ T Y +
Sbjct: 270 MRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----RLQNLWNWIGTAYKD 323
Query: 362 MTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLG 541
G YRR G+PSG++ TQ+ DSF N +++ + GF + +R+ L VLG
Sbjct: 324 TPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLG 381
Query: 542 D 544
D
Sbjct: 382 D 382
[28][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
insulare T-type partitivirus RepID=C1KDH6_9VIRU
Length = 585
Score = 68.9 bits (167), Expect = 3e-10
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Frame = +2
Query: 17 IIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYIEQ---IARDYS-TFFSLDWSSYD 181
I+ + M +PL + + +++G ET G I + R YS T+ ++DWS +D
Sbjct: 235 ILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLYSQTYLTVDWSGFD 294
Query: 182 QR----LPRVITDIY--YTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFL 343
R + R I D + Y DF Y PT TYPD + RM+ L ++
Sbjct: 295 LRSLFTIQREIFDDWRTYFDFT--------AYIPTR---TYPDSKTDPI--RMERLWNWQ 341
Query: 344 HTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERF 523
M F+LPD Y R IPSGL+ TQ+LDS NL +I + GF +I
Sbjct: 342 RDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILSAMGF---DITNL 398
Query: 524 ILLVLGDDN 550
++LV GDD+
Sbjct: 399 MILVQGDDS 407
[29][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
cryptic virus 1 RepID=B7ZGY8_9VIRU
Length = 587
Score = 67.8 bits (164), Expect = 6e-10
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Frame = +2
Query: 80 IMYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIV 244
+++G ET+ G N + + LDW +D L V DI + S
Sbjct: 256 LLWGYETMTGGWYRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFD 313
Query: 245 INHGYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPS 421
+HGYQPT +Y T D D R+ NL ++ LPDG +RR+ G+PS
Sbjct: 314 CSHGYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPS 367
Query: 422 GLYNTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
GL+ TQ+LDS N +F I+DAM F T+ I+ VLGDD+
Sbjct: 368 GLFITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS 408
[30][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 67.4 bits (163), Expect = 8e-10
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Frame = +2
Query: 149 TFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMD 325
+F +LDWS +D+R ++ I YT +++ + GY PT+ PT+P + + R++
Sbjct: 309 SFLTLDWSRFDKRAYFPLLRRILYT--VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLE 365
Query: 326 NLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGF 499
L +L T N +LPDG YRR GIPSGL+ TQ LDS+ N ++ + F
Sbjct: 366 RL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDSWYNYTMLATILSALHF 423
Query: 500 TNSEIERFILLVLGDDN 550
+ I+ V GDD+
Sbjct: 424 ---DPLHCIIKVQGDDS 437
[31][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 65.9 bits (159), Expect = 2e-09
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Frame = +2
Query: 80 IMYGLETIRGSNRYIE---QIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVI 247
+++G E ++G + + Q R T SLDWS +D+R L VI D++ +S
Sbjct: 245 LLWGNEIMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDF 302
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 427
H Y+PT Y + H+ R++NL ++ + L PDG Y+ T GI SG
Sbjct: 303 TH-YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGF 358
Query: 428 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN 550
TQ LDSF N+ +++ + G N E F + V GDD+
Sbjct: 359 QQTQLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDS 398
[32][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-2 RepID=Q6BE42_9VIRU
Length = 538
Score = 63.9 bits (154), Expect = 8e-09
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Frame = +2
Query: 2 VDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGSNRYI--EQIARD--YSTFFSLD 166
V I E M +PL +I + +++ E++ G + E AR YS F+LD
Sbjct: 161 VPKYLIFAEAMFFWPLFSIYFTSANTPLLWNYESLNGGWHRLDSEYHARYTMYSPIFNLD 220
Query: 167 WSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY-PTYPDLDE------HKLY---- 313
WS +D R +Y+T + + ++ + Y PT P LDE H Y
Sbjct: 221 WSEFDMR-------VYFTVWSDIIDRVSTYFCFCGRYCPTLPVLDEETGTQLHPPYSEPF 273
Query: 314 ---HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAM 484
R+ NL ++ Y NM + G ++R+ G+PSG++ TQ+ DSF N +I+ +
Sbjct: 274 TNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMPSGIFCTQFYDSFYNAVIIVTCL 333
Query: 485 LEFGFTNSEIER-FILLVLGDD 547
L G+ E+ ++ ++GDD
Sbjct: 334 LALGY---EVRHDHLIKLMGDD 352
[33][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 63.9 bits (154), Expect = 8e-09
Identities = 38/134 (28%), Positives = 68/134 (50%)
Frame = +2
Query: 149 TFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDN 328
++ +LDW +D++ I D + D + + + ++GY PT +YP + R+
Sbjct: 311 SYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPDTKSTWTQERSTRLKR 369
Query: 329 LLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNS 508
L + + + +LP+G+ Y R GIPSGL+ TQ +DS+ N ++ + GF
Sbjct: 370 LFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLFITQLIDSWYNYTMLATILSAMGF--- 426
Query: 509 EIERFILLVLGDDN 550
+ I+ V GDD+
Sbjct: 427 DPRSCIIKVQGDDS 440
[34][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 62.4 bits (150), Expect = 2e-08
Identities = 38/134 (28%), Positives = 67/134 (50%)
Frame = +2
Query: 149 TFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDN 328
++ +LDW +D++ I D + D + + + ++GY PT +YP R+
Sbjct: 311 SYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTKDYPDTKSTWTQGRSTRIKR 369
Query: 329 LLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNS 508
L + + + +LP+G+ Y R GIPSGL+ TQ +DS+ N ++ + GF
Sbjct: 370 LFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLFITQLIDSWYNYTMLATILSAMGF--- 426
Query: 509 EIERFILLVLGDDN 550
+ I+ V GDD+
Sbjct: 427 DPRSCIIKVQGDDS 440
[35][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
Length = 367
Score = 59.3 bits (142), Expect = 2e-07
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Frame = +2
Query: 149 TFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPTYEYP---TYPDLDEHKLYH 316
T+ ++DWS +D+R +I I+ R +GY PT +YP T+PD
Sbjct: 80 TYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPTKDYPFSPTHPD-------- 129
Query: 317 RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 496
++ L + + + +LP+G+ Y+R GIPSGL+ TQ +DS+ N ++ +
Sbjct: 130 KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLFITQLMDSWYNYVMLCSIL---H 186
Query: 497 FTNSEIERFILLVLGDDN 550
+ + + + I+ V GDD+
Sbjct: 187 YMDIDPKTCIIKVQGDDS 204
[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
isometric virus RepID=B7X9J3_9VIRU
Length = 587
Score = 56.2 bits (134), Expect = 2e-06
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Frame = +2
Query: 80 IMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVI 247
+++G E + G R + + R +T SLDWS +D+R L VI D++ D RS
Sbjct: 250 LLWGNEMMSGGWRKLNRTIYNGRTVNTVLSLDWSQFDKRALHEVIDDVH--DIWRSYFDF 307
Query: 248 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 427
+ Y PT YP P DE R++NL ++ L G + GI SG
Sbjct: 308 SF-YMPTSFYPNAP-TDE----SRLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGF 361
Query: 428 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFI 526
TQ LDSF N+ +I+ + G + + FI
Sbjct: 362 QQTQLLDSFVNMIMILTCLSRAGVNINSKDFFI 394