[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 209 bits (532), Expect = 1e-52
Identities = 101/191 (52%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
V+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+S
Sbjct: 250 VTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMS 309
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEFQMFVPS 351
SPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF + P+ K K ++ +PS
Sbjct: 310 SPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPS 369
Query: 352 RVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGM 531
RV N+ K TN+VNAFAIMCATTGMH GKCI+HF+W ++G++SF +GM
Sbjct: 370 RVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGM 429
Query: 532 GTKDV--HHGE 558
G + HHGE
Sbjct: 430 GDSTIGEHHGE 440
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 209 bits (532), Expect = 1e-52
Identities = 101/191 (52%), Positives = 131/191 (68%), Gaps = 5/191 (2%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
V+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+S
Sbjct: 1060 VTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMS 1119
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEFQMFVPS 351
SPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF + P+ K K ++ +PS
Sbjct: 1120 SPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPS 1179
Query: 352 RVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGM 531
RV N+ K TN+VNAFAIMCATTGMH GKCI+HF+W ++G++SF +GM
Sbjct: 1180 RVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGM 1239
Query: 532 GTKDV--HHGE 558
G + HHGE
Sbjct: 1240 GDSTIGEHHGE 1250
[3][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 199 bits (506), Expect = 1e-49
Identities = 96/193 (49%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
V+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L
Sbjct: 249 VTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLC 308
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSR 354
+PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR
Sbjct: 309 APMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSR 368
Query: 355 VSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMG 534
+ NL K V TNFVNA AI+CATTGMH G C +HF+W W H E K G L F GMG
Sbjct: 369 IGNLSSKHVKVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMG 427
Query: 535 TKDVHHGETRFFS 573
+ H G+T ++
Sbjct: 428 INNEHIGDTMCYN 440
[4][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 199 bits (506), Expect = 1e-49
Identities = 96/193 (49%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
V+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L
Sbjct: 1086 VTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLC 1145
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSR 354
+PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K ++ +PSR
Sbjct: 1146 APMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSR 1205
Query: 355 VSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMG 534
+ NL K V TNFVNA AI+CATTGMH G C +HF+W W H E K G L F GMG
Sbjct: 1206 IGNLSSKHVKVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMG 1264
Query: 535 TKDVHHGETRFFS 573
+ H G+T ++
Sbjct: 1265 INNEHIGDTMCYN 1277
[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 190 bits (483), Expect = 6e-47
Identities = 89/173 (51%), Positives = 116/173 (67%), Gaps = 1/173 (0%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
++ KLR+ +W + + + H + G IQ+ +TANFG GA+FW++PLS
Sbjct: 249 LTSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLS 307
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGK-DKEFQMFVPSRV 357
+P AP+ VE+KFEFYIRI GID PDLC+QINYKQRFGWFM+ P K E +PSR+
Sbjct: 308 APRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRI 367
Query: 358 SNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLS 516
N+ +K C NF NAFAIMCATTGMHWG+CI+HFTW+W + EA K +S
Sbjct: 368 GNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFTWSWHRNTEAGKNAREIS 420
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 188 bits (478), Expect = 2e-46
Identities = 85/180 (47%), Positives = 120/180 (66%), Gaps = 2/180 (1%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
VSC LR+ +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L
Sbjct: 1082 VSCSLRVALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLC 1141
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSR 354
+P+APE +E+ F++YI IHGI+++ LC++INY Q F WFM++ + +P+R
Sbjct: 1142 APLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPAR 1201
Query: 355 VSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMG 534
++NL K V TNFVNA AIMCATTGMH+GKC +HF+W W + + G +S TGMG
Sbjct: 1202 MANLTSKEVQVTNFVNALAIMCATTGMHFGKCTLHFSWGWYRG-KLADQSGAVSLQTGMG 1260
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 186 bits (471), Expect = 1e-45
Identities = 90/195 (46%), Positives = 123/195 (63%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
VSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L
Sbjct: 249 VSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLC 308
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSR 354
+P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++ + +P+R
Sbjct: 309 APLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPAR 368
Query: 355 VSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMG 534
++NL K V TNFVNA AIMCATTGMH+GKC +HF+W W + + G S TGMG
Sbjct: 369 MANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMG 427
Query: 535 TKDV--HHGETRFFS 573
V H G F+
Sbjct: 428 KSTVAEHFGGRHSFN 442
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 186 bits (471), Expect = 1e-45
Identities = 90/195 (46%), Positives = 123/195 (63%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
VSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L
Sbjct: 1081 VSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLC 1140
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQMFVPSR 354
+P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++ + +P+R
Sbjct: 1141 APLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPAR 1200
Query: 355 VSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMG 534
++NL K V TNFVNA AIMCATTGMH+GKC +HF+W W + + G S TGMG
Sbjct: 1201 MANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMG 1259
Query: 535 TKDV--HHGETRFFS 573
V H G F+
Sbjct: 1260 KSTVAEHFGGRHSFN 1274
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 169 bits (429), Expect = 1e-40
Identities = 79/149 (53%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
VS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+S
Sbjct: 74 VSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMS 133
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQMFVPSRV 357
SPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ +KE + +PSR+
Sbjct: 134 SPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRI 193
Query: 358 SNLVIKGVDCTNFVNAFAIMCATTGMHWG 444
+N+ K + N VNAF+IMCATTGM WG
Sbjct: 194 ANIEYKEAEVINHVNAFSIMCATTGMQWG 222
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 169 bits (429), Expect = 1e-40
Identities = 79/149 (53%), Positives = 104/149 (69%), Gaps = 1/149 (0%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
VS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+S
Sbjct: 1094 VSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMS 1153
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQMFVPSRV 357
SPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ +KE + +PSR+
Sbjct: 1154 SPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRI 1213
Query: 358 SNLVIKGVDCTNFVNAFAIMCATTGMHWG 444
+N+ K + N VNAF+IMCATTGM WG
Sbjct: 1214 ANIEYKEAEVINHVNAFSIMCATTGMQWG 1242
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 107 bits (267), Expect = 7e-22
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
V+ KL I +W + H D G + +L I+ FY+++ +G GA + L
Sbjct: 261 VASKLHISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLC 320
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVS 360
SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P ++ + +
Sbjct: 321 SPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSN 380
Query: 361 NLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGT 537
+L + + T + NAF MC T+ MH+G I+HF+W + A+ G ++ G G
Sbjct: 381 HLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGP 440
Query: 538 KDVH-HGETRFFSI 576
++ + G R FSI
Sbjct: 441 EEENFRGHCRNFSI 454
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 103 bits (257), Expect = 1e-20
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
V+ + RI +W I H D G + +L I+ FY+++ +G GA V L
Sbjct: 249 VASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLC 308
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVS 360
SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P ++ + +
Sbjct: 309 SPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSN 368
Query: 361 NLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGT 537
+L + + T + NAF MC T+ MH+G I+HF+W + A+ G ++ G G
Sbjct: 369 HLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGP 428
Query: 538 KDVH-HGETRFFSI 576
++ + G R SI
Sbjct: 429 EEENFRGHCRNLSI 442
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 103 bits (257), Expect = 1e-20
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 VSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLS 180
V+ + RI +W I H D G + +L I+ FY+++ +G GA V L
Sbjct: 932 VASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLC 991
Query: 181 SPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVS 360
SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P ++ + +
Sbjct: 992 SPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSN 1051
Query: 361 NLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHDIEASKMKGNLSFGTGMGT 537
+L + + T + NAF MC T+ MH+G I+HF+W + A+ G ++ G G
Sbjct: 1052 HLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGP 1111
Query: 538 KDVH-HGETRFFSI 576
++ + G R SI
Sbjct: 1112 EEENFRGHCRNLSI 1125
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.6 bits (135), Expect = 1e-06
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Frame = +1
Query: 40 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 219
PT+ Q PH + G E+ I++ F+S A + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 220 FYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDC 387
F + I+ DSQ P + F +KP+ +P + + K
Sbjct: 333 FIVHINTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATV 392
Query: 388 TNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGT 525
T N + + A TG H+G+ V +W +A +G++S T
Sbjct: 393 TLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITT 436
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 55.1 bits (131), Expect = 4e-06
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 4/168 (2%)
Frame = +1
Query: 34 TTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESK 213
T PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+
Sbjct: 271 TPPTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGS 330
Query: 214 FEFYIRIH--GIDSQ--PDLCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGV 381
+EF + I DSQ P + F +KP+ +P + + K
Sbjct: 331 YEFIVHIDTWRPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDA 390
Query: 382 DCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGT 525
T N + + A TG H+G+ V +W +A +G++S T
Sbjct: 391 TVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITT 436
[16][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 54.7 bits (130), Expect = 5e-06
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Frame = +1
Query: 1 VSCKLRIIIWG--TTPTIAQTGQMPHCDIIEGGSG-ELRIQSPFYSTANFGSEGAQFWVI 171
+SC++ +I+ T + Q ++P C I GG +RIQ+PF F + G Q +
Sbjct: 293 ISCEMFLILQPDKTAHNLEQALRLPGCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIY 351
Query: 172 PLSSPMAPEKVESKFEFYIRIHGIDSQPDLC-KQINYKQRFGWFMVKPEGKDKEFQMFVP 348
+ PM + + + +++ + I + D + I F W + FQ +P
Sbjct: 352 AVGGPMGAQAISAPYQYMVHFSHIQEEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IP 409
Query: 349 SRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFTW 468
+R+S+LV+ G T NA A + + G G+ F W
Sbjct: 410 ARLSDLVLPGQTVTMRRNALANLIRSCGFFRGRVTFVFQW 449
[17][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 54.7 bits (130), Expect = 5e-06
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 5/167 (2%)
Frame = +1
Query: 40 PTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 219
PT+ Q PH + G E+ I++ +S A + ++PLS P+AP+ +E
Sbjct: 273 PTLRQVLWGPHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYE 332
Query: 220 FYIRIH--GIDSQPDLCKQINYKQRFGWFM---VKPEGKDKEFQMFVPSRVSNLVIKGVD 384
F + I+ DSQ + + + WF +KP+ +P + + K
Sbjct: 333 FIVHINTWRPDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDAT 391
Query: 385 CTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDIEASKMKGNLSFGT 525
T N + + A TG H+G+ V +W +A +G++S T
Sbjct: 392 VTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITT 436