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[1][TOP] >UniRef100_B9R9A5 DNA-directed RNA polymerase III 62 kDa polypeptide, putative n=1 Tax=Ricinus communis RepID=B9R9A5_RICCO Length = 485 Score = 174 bits (441), Expect = 5e-42 Identities = 84/161 (52%), Positives = 115/161 (71%) Frame = +1 Query: 82 QWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNC 261 Q GIK+A +IT+HFG +VA VC+ LL++GPLT+ +V +TEL+ VKNSLLVLIQHNC Sbjct: 5 QHGIKYATHIITNHFGNLVAKVCQCLLRKGPLTVQKVVEFTELNQTQVKNSLLVLIQHNC 64 Query: 262 VQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGR 441 VQ + + D+ K+ T Y+ LFDNILHR RF KF+ I+S++ C I +GLL +GR Sbjct: 65 VQAYR----SGDDLKLTTHYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLLEHGR 120 Query: 442 LNLKQMVDRASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564 L +KQ+VDRA+ + D+V+E+LCKL+ RY+E CP E Sbjct: 121 LTVKQIVDRANSRNSIGLDSVKENLCKLVNGRYIEHCPASE 161 [2][TOP] >UniRef100_A7QXF4 Chromosome undetermined scaffold_222, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QXF4_VITVI Length = 510 Score = 166 bits (421), Expect = 9e-40 Identities = 89/167 (53%), Positives = 118/167 (70%), Gaps = 3/167 (1%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 M Q+G++ AV LI+ HFG +VA VC+ LL++G LTL ++R+TEL VK+ +LVLIQ Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60 Query: 253 HNCVQPFHF-QGVTIDES-KVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426 HNCVQ F Q V E+ +V TQY+ LF NILHR RF KF+ IVSEEL +C +I +GL Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120 Query: 427 LHNGRLNLKQMVDRA-SQEKAEAEDTVRESLCKLLMARYVERCPIPE 564 L +GRL L+Q++DRA S +K +D +RES KL+ A +VERCP E Sbjct: 121 LQHGRLTLEQILDRAKSNQKPVVQDALRESFLKLVRAHFVERCPASE 167 [3][TOP] >UniRef100_UPI0001986342 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001986342 Length = 524 Score = 166 bits (420), Expect = 1e-39 Identities = 89/170 (52%), Positives = 118/170 (69%), Gaps = 6/170 (3%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 M Q+G++ AV LI+ HFG +VA VC+ LL++G LTL ++R+TEL VK+ +LVLIQ Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60 Query: 253 HNCVQPFHFQG-VTIDES-KVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426 HNCVQ F Q V E+ +V TQY+ LF NILHR RF KF+ IVSEEL +C +I +GL Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120 Query: 427 LHNGRLNLKQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCPIPE 564 L +GRL L+Q++DRA ++E E D +RES KL+ A +VERCP E Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASE 170 [4][TOP] >UniRef100_B9ID92 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9ID92_POPTR Length = 519 Score = 166 bits (419), Expect = 2e-39 Identities = 87/166 (52%), Positives = 118/166 (71%), Gaps = 3/166 (1%) Frame = +1 Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255 V Q+GIK+AV +IT+HFG +VA VC+ LLK+GPL L +VRYTELS V+N LLVLIQH Sbjct: 1 VSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQH 60 Query: 256 NCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429 NC+QPF +G + +KV + Y+VLFDN+LHR RF KFM IVS+E C + + LL Sbjct: 61 NCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLL 120 Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564 +GRL+ +Q+ D + + + ++E++ KL+MARYVERCPI E Sbjct: 121 QHGRLSSEQIFDGFRDRSSSGGMEALQENMHKLVMARYVERCPISE 166 [5][TOP] >UniRef100_A5C7H5 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5C7H5_VITVI Length = 721 Score = 163 bits (412), Expect = 1e-38 Identities = 87/168 (51%), Positives = 116/168 (69%), Gaps = 4/168 (2%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 M Q+G++ AV LI+ HFG +VA VC+ LL++G TL ++R+TEL VK+ +LVLIQ Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQ 60 Query: 253 HNCVQPFHF-QGVTIDES-KVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426 HNCVQ F Q V E+ +V TQY+ LF NILHR RF KF+ IVSEEL +C +I +GL Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120 Query: 427 LHNGRLNLKQMVDRASQEKAE--AEDTVRESLCKLLMARYVERCPIPE 564 L +GRL L+Q++DRA + E +D +RES KL+ A +VERCP E Sbjct: 121 LQHGRLTLEQILDRAKSNQREPVVQDALRESFLKLVRAHFVERCPASE 168 [6][TOP] >UniRef100_UPI00019831C0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019831C0 Length = 458 Score = 152 bits (385), Expect = 1e-35 Identities = 82/170 (48%), Positives = 110/170 (64%), Gaps = 2/170 (1%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 M ++GIK AV LI+ FG A VC+ LL++G L LD +VR +LS VK L VLIQ Sbjct: 1 MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60 Query: 253 HNCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426 HNCVQ F +G + V TQY++LFDNILHR RFPK + IVS+EL +C ++F+ Sbjct: 61 HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120 Query: 427 LHNGRLNLKQMVDRASQEKAEAEDTVRESLCKLLMARYVERCPIPEVSIV 576 L +G L L+Q++DR + E +D +R S KL+ A YVERCP P+ +V Sbjct: 121 LKHGWLTLQQILDRVPSNQNEVQDALRGSFTKLVNAHYVERCPAPDPFLV 170 [7][TOP] >UniRef100_A7NWI5 Chromosome chr5 scaffold_2, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7NWI5_VITVI Length = 528 Score = 148 bits (373), Expect = 3e-34 Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 6/174 (3%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 M ++GIK AV LI+ FG A VC+ LL++G L LD +VR +LS VK L VLIQ Sbjct: 1 MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60 Query: 253 HNCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426 HNCVQ F +G + V TQY++LFDNILHR RFPK + IVS+EL +C ++F+ Sbjct: 61 HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120 Query: 427 LHNGRLNLKQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCPIPEVSIV 576 L +G L L+Q++DR + E E D +R S KL+ A YVERCP P+ +V Sbjct: 121 LKHGWLTLQQILDRVPSNQNEGEPFVQDALRGSFTKLVNAHYVERCPAPDPFLV 174 [8][TOP] >UniRef100_A5ASC9 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5ASC9_VITVI Length = 549 Score = 147 bits (372), Expect = 5e-34 Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 6/174 (3%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 M ++GIK AV LI+ FG A VC+ L+++G L LD +VR T+LS VK L VLIQ Sbjct: 1 MTPEYGIKLAVHLISTDFGDHAAKVCDCLIRKGTLALDDIVRTTKLSPQQVKTYLKVLIQ 60 Query: 253 HNCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426 HNCVQ F +G + V TQY++LFDNILHR RFPK + IVS+EL +C ++F+ Sbjct: 61 HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEKLFEAF 120 Query: 427 LHNGRLNLKQMVDRASQEKAE----AEDTVRESLCKLLMARYVERCPIPEVSIV 576 L +G L L+Q++DR + E +D +R S KL+ A YVERCP P+ +V Sbjct: 121 LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLV 174 [9][TOP] >UniRef100_B8A7K6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8A7K6_ORYSI Length = 476 Score = 143 bits (360), Expect = 1e-32 Identities = 82/169 (48%), Positives = 105/169 (62%), Gaps = 5/169 (2%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 MV Q GI AV +I+DHFG +V+ VC LL+ G L L +VR ELS VKNSLLVLIQ Sbjct: 1 MVSQHGILLAVAIISDHFGSLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60 Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432 HNCVQ F+ D K T YL +FDNI+HR RF KF+ I+ ++ + A + +GLL Sbjct: 61 HNCVQAFNAPRGNGD--KTVTHYLAIFDNIVHRQRFSKFLSIIRADIPESEA-LLEGLLQ 117 Query: 433 NGRLNLKQMVDRASQEKAE-----AEDTVRESLCKLLMARYVERCPIPE 564 NGRL Q+V+R + E A + +R + KL+ A YVERCP PE Sbjct: 118 NGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPE 166 [10][TOP] >UniRef100_Q5QM91 Os01g0679000 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5QM91_ORYSJ Length = 506 Score = 142 bits (359), Expect = 1e-32 Identities = 82/169 (48%), Positives = 105/169 (62%), Gaps = 5/169 (2%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 MV Q GI AV +I+DHFG +V+ VC LL+ G L L +VR ELS VKNSLLVLIQ Sbjct: 1 MVSQHGILLAVAIISDHFGPLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60 Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432 HNCVQ F+ D K T YL +FDNI+HR RF KF+ I+ ++ + A + +GLL Sbjct: 61 HNCVQAFNAPRGNGD--KTVTHYLAIFDNIVHRQRFSKFLSIIRADIPESEA-LLEGLLQ 117 Query: 433 NGRLNLKQMVDRASQEKAE-----AEDTVRESLCKLLMARYVERCPIPE 564 NGRL Q+V+R + E A + +R + KL+ A YVERCP PE Sbjct: 118 NGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPE 166 [11][TOP] >UniRef100_Q9SMT8 RNA polymerase III subunit-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9SMT8_ARATH Length = 529 Score = 141 bits (356), Expect = 3e-32 Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 3/166 (1%) Frame = +1 Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVH--VKNSLLVLI 249 + ++GI +A+ +IT FG +V+ VCE LL++GPL+ + R E H VK+ L +LI Sbjct: 1 MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 60 Query: 250 QHNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429 QHNCVQ F + ESK QY+VLF+NILHR R+ KF IV+EEL KC + GLL Sbjct: 61 QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGLL 120 Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564 NGRL L Q ++R + +R+SL KL+ AR+VER P PE Sbjct: 121 SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPE 166 [12][TOP] >UniRef100_Q8LPK6 RNA polymerase III subunit-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8LPK6_ARATH Length = 523 Score = 141 bits (356), Expect = 3e-32 Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 3/166 (1%) Frame = +1 Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVH--VKNSLLVLI 249 + ++GI +A+ +IT FG +V+ VCE LL++GPL+ + R E H VK+ L +LI Sbjct: 3 MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 62 Query: 250 QHNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429 QHNCVQ F + ESK QY+VLF+NILHR R+ KF IV+EEL KC + GLL Sbjct: 63 QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGLL 122 Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564 NGRL L Q ++R + +R+SL KL+ AR+VER P PE Sbjct: 123 SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPE 168 [13][TOP] >UniRef100_Q8LE81 RNA polymerase III subunit-like protein n=1 Tax=Arabidopsis thaliana RepID=Q8LE81_ARATH Length = 521 Score = 140 bits (353), Expect = 7e-32 Identities = 76/166 (45%), Positives = 104/166 (62%), Gaps = 3/166 (1%) Frame = +1 Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVH--VKNSLLVLI 249 + ++GI +A+ +IT FG +V+ VCE LL++GPL+ + R E H VK+ L +LI Sbjct: 1 MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 60 Query: 250 QHNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429 QHNCVQ F + ESK QY+VLF+NILHR R+ KF IV+E+L KC + GLL Sbjct: 61 QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEQLDSKCGAVLDGLL 120 Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564 NGRL L Q ++R + +R+SL KL+ AR+VER P PE Sbjct: 121 SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPE 166 [14][TOP] >UniRef100_C5XGQ0 Putative uncharacterized protein Sb03g031160 n=1 Tax=Sorghum bicolor RepID=C5XGQ0_SORBI Length = 506 Score = 129 bits (325), Expect = 1e-28 Identities = 77/169 (45%), Positives = 102/169 (60%), Gaps = 5/169 (2%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 MV Q GI AV +I+DHFG IV+ VC LL+ G L+L + R ELS VKNSLL+LIQ Sbjct: 1 MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLLEIGRRLELSPAQVKNSLLILIQ 60 Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432 HNCVQ + D K T YL +FDN+LHR RF KF+ +V ++ + + +GLL Sbjct: 61 HNCVQAYTSPRGGGD--KTVTLYLAIFDNVLHRLRFSKFLSVVRVDIPES-EVLLEGLLQ 117 Query: 433 NGRLNLKQMVDRASQEKAE-----AEDTVRESLCKLLMARYVERCPIPE 564 NGRL +Q+V+R + E + +R + KL+ A YVERCP E Sbjct: 118 NGRLTFEQLVERTIFKVPEGSPLPTREEIRMNFNKLVYAHYVERCPKSE 166 [15][TOP] >UniRef100_B9EYL3 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9EYL3_ORYSJ Length = 423 Score = 129 bits (325), Expect = 1e-28 Identities = 76/164 (46%), Positives = 97/164 (59%) Frame = +1 Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252 MV Q GI AV +I+DHFG +V+ VC LL+ G L L +VR ELS VKNSLLVLIQ Sbjct: 1 MVSQHGILLAVAIISDHFGPLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60 Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432 HNCVQ F+ D K T YL +FDNI+HR RF KF+ I+ ++ + A + +GLL Sbjct: 61 HNCVQAFNAPRGNGD--KTVTHYLAIFDNIVHRQRFSKFLSIIRADIPESEA-LLEGLLQ 117 Query: 433 NGRLNLKQMVDRASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564 NG + A + +R + KL+ A YVERCP PE Sbjct: 118 NGSI-------------TPAREEIRMNFNKLVFAHYVERCPKPE 148 [16][TOP] >UniRef100_A9TAL8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TAL8_PHYPA Length = 520 Score = 117 bits (293), Expect = 7e-25 Identities = 63/146 (43%), Positives = 96/146 (65%), Gaps = 3/146 (2%) Frame = +1 Query: 145 VCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQPF--HFQGVTIDESKVKTQ 318 V + L+ +GPL L + R++EL+ +K+SLLVL+QH+CVQ + +GV +V T Sbjct: 4 VVKCLVYRGPLALADIARFSELNPSTLKSSLLVLVQHSCVQAYKVEHEGVGSAPPRVSTS 63 Query: 319 YLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNLKQMVDR-ASQEKAEAE 495 Y+ L DNILHR RFPKF+ V E+LG++ + +GLL +GRL L+Q+ R A++ + Sbjct: 64 YVPLCDNILHRMRFPKFLLAVREDLGEEVGSLVEGLLEHGRLTLEQITQRTAAKAGKKVV 123 Query: 496 DTVRESLCKLLMARYVERCPIPEVSI 573 V+E+ KL+ AR++ERCP E S+ Sbjct: 124 KGVKETFAKLVAARFIERCPAAEPSL 149 [17][TOP] >UniRef100_Q55FJ5 DNA-directed RNA polymerase III subunit rpc3 n=1 Tax=Dictyostelium discoideum RepID=RPC3_DICDI Length = 666 Score = 70.1 bits (170), Expect = 1e-10 Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 22/178 (12%) Frame = +1 Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTE----LSTVHVKNSLLVLIQHNC 261 K A+ ++ + FG V V E L+++G + ++ + L+ +K LLVLIQHN Sbjct: 5 KVAIDIVKESFGDDVTKVFEFLVQRGKSSYKIINQSLSGKGGLTIKRIKQCLLVLIQHNL 64 Query: 262 VQPFHFQ-GVTIDESKV---------KTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQ 411 V F +T DE + + Y + N +HR RFPKF+ + GD+ A Sbjct: 65 VTYEEFLLPLTKDEIEKLVPGEPLPSDSVYEAIIVNAIHRLRFPKFINYIKHSKGDEAAY 124 Query: 412 IFKGLLHNGRLNLKQMVDRASQ----EKAEAEDTV----RESLCKLLMARYVERCPIP 561 I + L+ +GRL + ++ +ASQ + E +D + ++ KL+M +++ R P P Sbjct: 125 ILEELIDHGRLPMDLLIKQASQIQRVDTFEDQDDITKRFEDTFTKLIMDQFIMRAPRP 182 [18][TOP] >UniRef100_UPI00015A634F DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III subunit C3) (DNA-directed RNA polymerase III subunit C). n=1 Tax=Danio rerio RepID=UPI00015A634F Length = 539 Score = 67.0 bits (162), Expect = 1e-09 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 8/163 (4%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270 ++ LL+ +HFG +V NV L++ G LTL L T+L+ VK SL VL+QH Sbjct: 6 VRLCGLLLQEHFGDVVENVGTHLIRNGVLTLRALAHETKLALDLVKKSLCVLVQHGMCT- 64 Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450 G +Y + ++ILH R+P+++ GD I + +L G++ + Sbjct: 65 ---FGPGRRGPAGPVEYHINCEHILHMLRYPRYIYTAKSLYGDTGELIVEEILQRGQMTM 121 Query: 451 ----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555 K + DR + E + + V + +L+ +++RCP Sbjct: 122 SSTVKTVADRLTHNMPEGQSMDYNEVVSAFSRLVETHFLQRCP 164 [19][TOP] >UniRef100_Q7ZUX1 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Danio rerio RepID=RPC3_DANRE Length = 539 Score = 67.0 bits (162), Expect = 1e-09 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 8/163 (4%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270 ++ LL+ +HFG +V NV L++ G LTL L T+L+ VK SL VL+QH Sbjct: 6 VRLCGLLLQEHFGDVVENVGTHLIRNGVLTLRALAHETKLALDLVKKSLCVLVQHGMCT- 64 Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450 G +Y + ++ILH R+P+++ GD I + +L G++ + Sbjct: 65 ---FGPGRRGPAGPVEYHINCEHILHMLRYPRYIYTAKSLYGDTGELIVEEILQRGQMTM 121 Query: 451 ----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555 K + DR + E + + V + +L+ +++RCP Sbjct: 122 SSTVKTVADRLTHNMPEGQSMDYNEVVSAFSRLVETHFLQRCP 164 [20][TOP] >UniRef100_Q5CFR3 Putative uncharacterized protein n=1 Tax=Cryptosporidium hominis RepID=Q5CFR3_CRYHO Length = 618 Score = 66.6 bits (161), Expect = 1e-09 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 18/150 (12%) Frame = +1 Query: 109 LITDHFGKIVANVCEKLLKQGPLTLD----LLVRYTELST----------VHVKNSLLVL 246 +I+ HFG + A + +KLL GPL +D L+++ E S + +NS++ L Sbjct: 11 IISTHFGGLPAMIIKKLLVNGPLPMDRLYHLVIKDKESSKYLSSNSKDNFLSFRNSMMYL 70 Query: 247 IQHNCVQPFHFQGVTIDESKVKTQYLVLF----DNILHRARFPKFMEIVSEELGDKCAQI 414 + H C+ + I+ K V+F D+++ R RFP +M + + LG+ C I Sbjct: 71 VHHYCIIYYEISDPNIELDNSKEGKNVVFEVNIDHVISRLRFPLYMAHIEKLLGETCKYI 130 Query: 415 FKGLLHNGRLNLKQMVDRASQEKAEAEDTV 504 F ++ +GR++ K ++ S+ E+ + Sbjct: 131 FMEVIKHGRISTKILISELSETVENIEENI 160 [21][TOP] >UniRef100_UPI00017B1A1A UPI00017B1A1A related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B1A1A Length = 537 Score = 66.2 bits (160), Expect = 2e-09 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHN-CVQ 267 ++ LL+ +HFG++V V LLK G L ++ T + VK +L VL+QH CV Sbjct: 6 VRLCGLLLREHFGEVVEKVGTHLLKSGAQNLRTILHETGMPLDLVKKALCVLVQHGICV- 64 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 F +G T Y D IL R+P+++ GD I + LL G + Sbjct: 65 -FRHRG-----PGRPTDYQSSCDRILRILRYPRYIYTAKTLYGDTGELIVEELLQRGEMT 118 Query: 448 L----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555 + K + DR +Q + + V + CKL+ +++RCP Sbjct: 119 MSRTVKTVADRLTQNMEDGQSMDYSEVSSAFCKLVETHFLQRCP 162 [22][TOP] >UniRef100_Q4RBZ5 Chromosome 8 SCAF20216, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RBZ5_TETNG Length = 542 Score = 66.2 bits (160), Expect = 2e-09 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHN-CVQ 267 ++ LL+ +HFG++V V LLK G L ++ T + VK +L VL+QH CV Sbjct: 6 VRLCGLLLREHFGEVVEKVGTHLLKSGAQNLRTILHETGMPLDLVKKALCVLVQHGICV- 64 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 F +G T Y D IL R+P+++ GD I + LL G + Sbjct: 65 -FRHRG-----PGRPTDYQSSCDRILRILRYPRYIYTAKTLYGDTGELIVEELLQRGEMT 118 Query: 448 L----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555 + K + DR +Q + + V + CKL+ +++RCP Sbjct: 119 MSRTVKTVADRLTQNMEDGQSMDYSEVSSAFCKLVETHFLQRCP 162 [23][TOP] >UniRef100_UPI0000F33751 DNA-directed RNA polymerase III subunit C (EC 2.7.7.6). n=1 Tax=Bos taurus RepID=UPI0000F33751 Length = 533 Score = 65.5 bits (158), Expect = 3e-09 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 9/165 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y + +L R+P+++ D I + LL NG++ Sbjct: 66 QVHKRGV--------VEYEAQCNRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558 + +V + + E + V + +L+ +V+RCP+ Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLVDTHFVQRCPL 162 [24][TOP] >UniRef100_Q5XIL3 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Rattus norvegicus RepID=RPC3_RAT Length = 533 Score = 65.5 bits (158), Expect = 3e-09 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T+ S VK +L VLI HN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTKASLDQVKKALCVLIHHNLVIY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ GD I + LL NG++ Sbjct: 66 HVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELLLNGKMT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558 + +V + + E + V + +L +V+RCP+ Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPL 162 [25][TOP] >UniRef100_Q2TBL4 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bos taurus RepID=RPC3_BOVIN Length = 533 Score = 65.5 bits (158), Expect = 3e-09 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 9/165 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVTY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y + +L R+P+++ D I + LL NG++ Sbjct: 66 QVHKRGV--------VEYEAQCNRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558 + +V + + E + V + +L+ +V+RCP+ Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLVDTHFVQRCPL 162 [26][TOP] >UniRef100_Q5CQM8 Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CQM8_CRYPV Length = 618 Score = 65.1 bits (157), Expect = 4e-09 Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 18/150 (12%) Frame = +1 Query: 109 LITDHFGKIVANVCEKLLKQGPLTLD----LLVRYTELST----------VHVKNSLLVL 246 +I+ HFG + A + +KL+ GPL +D L+++ E S + +NS++ L Sbjct: 11 IISTHFGGLPAIIIKKLVVNGPLPMDRLYHLVIKDKESSKYLSSNSKNNFLSFRNSMMYL 70 Query: 247 IQHNCVQPFHFQGVTIDESKVKTQYLVLF----DNILHRARFPKFMEIVSEELGDKCAQI 414 + H C+ + I+ K V+F D+++ R RFP +M + + LG+ C I Sbjct: 71 VHHYCIIYYEISDPNIELDNSKEGKNVVFEVNIDHVISRLRFPLYMAHIEKLLGETCKYI 130 Query: 415 FKGLLHNGRLNLKQMVDRASQEKAEAEDTV 504 F ++ +GR++ K ++ S+ E+ + Sbjct: 131 FMEVIKHGRISTKILISELSETVENIEENI 160 [27][TOP] >UniRef100_Q9D483-2 Isoform 2 of DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Mus musculus RepID=Q9D483-2 Length = 202 Score = 65.1 bits (157), Expect = 4e-09 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T+ S VK +L VLI HN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLVRTGSQPLRVIAHDTKASLDQVKKALCVLIHHNLVLY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ GD I + LL NG++ Sbjct: 66 HVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELLLNGKMT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558 + +V + + E + V + +L +V+RCP+ Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPL 162 [28][TOP] >UniRef100_Q9D483 DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Mus musculus RepID=RPC3_MOUSE Length = 533 Score = 65.1 bits (157), Expect = 4e-09 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T+ S VK +L VLI HN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLVRTGSQPLRVIAHDTKASLDQVKKALCVLIHHNLVLY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ GD I + LL NG++ Sbjct: 66 HVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELLLNGKMT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558 + +V + + E + V + +L +V+RCP+ Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPL 162 [29][TOP] >UniRef100_UPI0000E1EB08 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD) isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1EB08 Length = 467 Score = 64.3 bits (155), Expect = 7e-09 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG+L Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [30][TOP] >UniRef100_UPI0000E1EB07 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD) isoform 4 n=1 Tax=Pan troglodytes RepID=UPI0000E1EB07 Length = 508 Score = 64.3 bits (155), Expect = 7e-09 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG+L Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [31][TOP] >UniRef100_UPI0000141956 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD) isoform 1 n=1 Tax=Pan troglodytes RepID=UPI0000141956 Length = 411 Score = 64.3 bits (155), Expect = 7e-09 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG+L Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [32][TOP] >UniRef100_Q9BT08 POLR3C protein n=1 Tax=Homo sapiens RepID=Q9BT08_HUMAN Length = 411 Score = 64.3 bits (155), Expect = 7e-09 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG+L Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [33][TOP] >UniRef100_Q9BUI4 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Homo sapiens RepID=RPC3_HUMAN Length = 534 Score = 64.3 bits (155), Expect = 7e-09 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG+L Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [34][TOP] >UniRef100_Q53F76 Polymerase (RNA) III (DNA directed) polypeptide C (62kD) variant (Fragment) n=1 Tax=Homo sapiens RepID=Q53F76_HUMAN Length = 534 Score = 63.9 bits (154), Expect = 9e-09 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267 IK LL+ +HFG+IV + +L++ G L ++ T S VK +L VL QHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVRLIRTGSQPLRVIAHDTGTSLDQVKKALCVLAQHNLVSY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG+L Sbjct: 66 QVHKRGVV--------EYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [35][TOP] >UniRef100_UPI0001796003 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide C (62kD) n=1 Tax=Equus caballus RepID=UPI0001796003 Length = 558 Score = 63.5 bits (153), Expect = 1e-08 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V Sbjct: 30 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 89 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG++ Sbjct: 90 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 141 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 142 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 185 [36][TOP] >UniRef100_UPI0000EB27D6 DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III subunit C3) (DNA-directed RNA polymerase III subunit C) (DNA-directed III 62 kDa polypeptide) (RPC62). n=1 Tax=Canis lupus familiaris RepID=UPI0000EB27D6 Length = 411 Score = 63.5 bits (153), Expect = 1e-08 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG++ Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [37][TOP] >UniRef100_UPI00004BC9F0 PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide C (62kD) n=1 Tax=Canis lupus familiaris RepID=UPI00004BC9F0 Length = 534 Score = 63.5 bits (153), Expect = 1e-08 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +GV +Y +L R+P+++ D I + LL NG++ Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117 Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555 + +V + + E + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161 [38][TOP] >UniRef100_Q6DJJ8 Polr3c-prov protein n=1 Tax=Xenopus laevis RepID=Q6DJJ8_XENLA Length = 529 Score = 63.5 bits (153), Expect = 1e-08 Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 9/163 (5%) Frame = +1 Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-QP 270 K LL+ +H+G+IVA V L++ G L ++V T S VK +L VLIQHN V Sbjct: 7 KLCSLLLEEHYGEIVARVGTFLIRTGNQPLRVIVNETGTSLDQVKKALCVLIQHNLVTYQ 66 Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450 + +G +Y D LH R+P+++ GD I + L NG++ L Sbjct: 67 LNKRGF--------VEYRAHCDRFLHILRYPRYIYTAKTLYGDTGELIVEELQLNGKMTL 118 Query: 451 KQMVDRASQEKAEA-EDT-------VRESLCKLLMARYVERCP 555 +V + + E ED+ V + L +V+RCP Sbjct: 119 SAVVKKVADRLTETMEDSKSMEYSEVSATFTHLADTHFVQRCP 161 [39][TOP] >UniRef100_UPI00005EB3DE PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide C (62kD) n=1 Tax=Monodelphis domestica RepID=UPI00005EB3DE Length = 535 Score = 63.2 bits (152), Expect = 1e-08 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 9/164 (5%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267 IK LL+ +HFG+IV + L++ G L ++V T S VK +L VLIQHN V Sbjct: 6 IKLCSLLLQEHFGEIVDKIGTHLIRTGGQPLRVIVHDTGTSLDQVKKALCVLIQHNLVTY 65 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 H +G+ +Y IL R+P+++ D I + LL NG++ Sbjct: 66 QIHKRGI--------VEYEAHCSRILRILRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117 Query: 448 L----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555 + K++ DR ++ + + V + +L +V+RCP Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYSEVSSTFGRLADTHFVQRCP 161 [40][TOP] >UniRef100_C1FE42 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FE42_9CHLO Length = 493 Score = 60.8 bits (146), Expect = 7e-08 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 2/137 (1%) Frame = +1 Query: 58 VSPNKMVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSL 237 +S ++ Q+ I A ++T+ FGK +C +L G TL V+ T LS + +L Sbjct: 1 MSHQRIHDQYEISLACGIVTESFGKDPGKICRAMLYHGSRTLRETVQETGLSPSRSQRAL 60 Query: 238 LVLIQHNCVQPFHFQGVTIDESK--VKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQ 411 L+L QHN V + I ES+ + QY IL R R+P+++ E Sbjct: 61 LILAQHNVV-------LVIPESRDEDECQYYTKLGVILERLRYPQYLLFAQEHYRGSHNL 113 Query: 412 IFKGLLHNGRLNLKQMV 462 + + LL NGRL+ Q++ Sbjct: 114 LIECLLENGRLDEHQLM 130 [41][TOP] >UniRef100_UPI0000E4A606 PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A606 Length = 532 Score = 60.1 bits (144), Expect = 1e-07 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 7/162 (4%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270 +K LL+ +HFG +V +C LLK G +V + VK +L VLIQHN V+ Sbjct: 6 LKLVSLLVQEHFGDVVEKICTHLLKNGSNNFRSVVSTVKEKPEQVKKALCVLIQHNIVK- 64 Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450 G+ + +Y + L R+P+++ GD I + +LH+G + + Sbjct: 65 ---YGL---NKRGMVEYTADVEKALLLVRYPRYIYSAKTLYGDIGELIVEEVLHHGEILM 118 Query: 451 KQMVDRASQEKAEAED-------TVRESLCKLLMARYVERCP 555 +V++ EA + +++ L+ +++R P Sbjct: 119 SNVVEKVKVRLKEAMEGNQLEPSAIKDKFIDLVNTHFLQRLP 160 [42][TOP] >UniRef100_UPI00016E2BA8 UPI00016E2BA8 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E2BA8 Length = 538 Score = 59.7 bits (143), Expect = 2e-07 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 8/163 (4%) Frame = +1 Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270 ++ LL+ +HFG++V + LL+ G L ++ T + VK L VL+Q N V Sbjct: 6 VRLCGLLLREHFGEVVEKLGTHLLRSGSQNLRTILHETGMPRDLVKKVLCVLVQ-NGVCV 64 Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450 F+ +G T Y + IL R+P+++ GD I + LL G + + Sbjct: 65 FNHRG-----PGRPTNYQANSNKILRILRYPRYIYTAKTLYGDTGELIIEELLQRGEMTM 119 Query: 451 ----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555 K + DR +Q + + V + CKL+ +++RCP Sbjct: 120 SRTVKTVADRLTQNMEDGQCMDYSEVSSAFCKLVETHFLQRCP 162 [43][TOP] >UniRef100_B0DSC2 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DSC2_LACBS Length = 539 Score = 57.8 bits (138), Expect = 6e-07 Identities = 42/151 (27%), Positives = 74/151 (49%) Frame = +1 Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQPF 273 + V +I +FG + A + LL +G L L L R+T L V+ +LVL+QHN + + Sbjct: 8 RLCVEIIHSNFGPLTAKIASVLLVRGRLPLPQLTRFTALRPRTVRACILVLVQHNII--W 65 Query: 274 HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNLK 453 H V DE ++ + V D L R RF KF+ E G A++ + +L +G+L + Sbjct: 66 H---VLSDEGEM---FEVNIDECLMRLRFGKFIYKSEELFGKPAAEVVQVILDHGKLKMP 119 Query: 454 QMVDRASQEKAEAEDTVRESLCKLLMARYVE 546 ++ + +++ KL+ Y++ Sbjct: 120 DIMALLGIYDGKGIIAYTQAIHKLVSGHYLK 150 [44][TOP] >UniRef100_C4JMM9 Predicted protein n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JMM9_UNCRE Length = 652 Score = 56.2 bits (134), Expect = 2e-06 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%) Frame = +1 Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255 + Q+ + LLITD+FG++ + + LL G L +V+ T LS VK+ L+VLIQ Sbjct: 1 MSQYAAELCKLLITDNFGELYSLIFSYLLHHGRQPLPRIVQNTHLSPRQVKHGLVVLIQQ 60 Query: 256 NCVQPFHF----QGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKG 423 + V FH G+T ES + Y + R KF ++V LG A++F Sbjct: 61 HLV--FHCTSFDDGITYYESDWRAAY--------NLVRPGKFTQLVKNRLGKHAARVFST 110 Query: 424 LLHNGRLNLKQM 459 +L G + + Sbjct: 111 ILSLGHAKISYL 122 [45][TOP] >UniRef100_UPI00019264DC PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide C n=1 Tax=Hydra magnipapillata RepID=UPI00019264DC Length = 590 Score = 55.8 bits (133), Expect = 2e-06 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 1/134 (0%) Frame = +1 Query: 100 AVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQPFHF 279 A+ +I DHFG I V LL+ G +L + ++S VK L++LIQHN Sbjct: 125 ALQIINDHFGDISEQVVAYLLQNGQRSLKDICDNVKISKDEVKKVLVILIQHNL------ 178 Query: 280 QGVTIDESKVK-TQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNLKQ 456 V+ ++ K K T+Y NI+ R F +++ I + GD I + LL NG L + Sbjct: 179 --VSFNKYKNKFTEYHTELHNIIRRRSFQRYIYIAKLKHGDIGELIIEKLLLNGCDTLSK 236 Query: 457 MVDRASQEKAEAED 498 + R + E+ E +D Sbjct: 237 VAKRVT-ERLEVDD 249 [46][TOP] >UniRef100_C5P7T7 RNA polymerase III subunit RPC82 family protein n=1 Tax=Coccidioides posadasii C735 delta SOWgp RepID=C5P7T7_COCP7 Length = 653 Score = 55.8 bits (133), Expect = 2e-06 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%) Frame = +1 Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255 + Q+ + LLITD+FG++ A + LL G L +V+ T LS VK+ L VL+Q Sbjct: 1 MSQYAAELCKLLITDNFGELYALIFIYLLNHGRQPLPRIVQNTHLSPRQVKHGLAVLVQQ 60 Query: 256 NCVQPFHF----QGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKG 423 + V FH G+T ES ++ Y + R K +++V E LG+ A I Sbjct: 61 HLV--FHCTSLDDGITYYESNWRSAY--------NLVRSGKIIQLVEERLGNHAASIVST 110 Query: 424 LLHNGRLNLKQM 459 LL G + + Sbjct: 111 LLALGHAKISYL 122 [47][TOP] >UniRef100_Q1DTR6 DNA-directed RNA polymerase III subunit RPC-3 n=1 Tax=Coccidioides immitis RepID=RPC3_COCIM Length = 653 Score = 55.8 bits (133), Expect = 2e-06 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%) Frame = +1 Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255 + Q+ + LLITD+FG++ A + LL G L +V+ T LS V++ L VL+Q Sbjct: 1 MSQYAAELCKLLITDNFGELYALIFIYLLNHGRQPLPRIVQNTHLSPRQVRHGLAVLVQQ 60 Query: 256 NCVQPFHF----QGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKG 423 + V FH G+T ES ++ Y + R K +++V E LG++ A I Sbjct: 61 HLV--FHCTSLDDGITYYESNWRSAY--------NLVRSGKIIQLVEERLGNRAASIVST 110 Query: 424 LLHNGRLNLKQM 459 LL G + + Sbjct: 111 LLALGHAKISYL 122 [48][TOP] >UniRef100_UPI00006A0D0C DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III subunit C3) (DNA-directed RNA polymerase III subunit C) (DNA-directed III 62 kDa polypeptide) (RPC62). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0D0C Length = 435 Score = 54.3 bits (129), Expect = 7e-06 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 14/168 (8%) Frame = +1 Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELS---TVHVKNSLLVLIQHNCV 264 K LL+ +H+G+IV V L++ G L ++ T S + VK +L VLIQHN V Sbjct: 7 KLCSLLLQEHYGEIVDRVGTFLIRTGNQPLRVIANETGTSLDQAIPVKKALCVLIQHNLV 66 Query: 265 Q-PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGR 441 + +G +Y D L R+P+++ GD I + LL NG+ Sbjct: 67 TYQLNKRGFV--------EYKAHVDRFLRILRYPRYIYTAKTLYGDTGELIVEELLLNGK 118 Query: 442 LNL----KQMVDRASQEKAEAE------DTVRESLCKLLMARYVERCP 555 + L K++ DR + E EA+ V + L +V+RCP Sbjct: 119 MTLSAAVKKVADRLT-ETMEADSLSMEYSEVSATFTHLADTHFVQRCP 165 [49][TOP] >UniRef100_Q171Y0 DNA-directed RNA polymerase III, 62-kS-subunit, putative n=1 Tax=Aedes aegypti RepID=Q171Y0_AEDAE Length = 507 Score = 53.9 bits (128), Expect = 9e-06 Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 6/163 (3%) Frame = +1 Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV--Q 267 K ++ HFG +V V + L TL ++++ T LS V +L +L++ Q Sbjct: 7 KLCSCIVQQHFGDVVRMVADDLFAAVAKTLSMVIKSTGLSKSEVCKALAILLKFGLARHQ 66 Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447 P +++ T+Y++ ++ +L R+P+F+ ++ + G +CA + + LL G Sbjct: 67 P--------NKAGSATEYILDYEKVLMVLRYPRFVHLIQTKYGPECATLTEELLRAGCQT 118 Query: 448 LKQMVDRASQ-EKAEAEDTV---RESLCKLLMARYVERCPIPE 564 ++ + + + ++T+ RE L+ Y R P P+ Sbjct: 119 ASYVILKGTAISDVKDKNTITKFREKFSDLVAKNYFIRAPDPK 161