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[1][TOP]
>UniRef100_B9R9A5 DNA-directed RNA polymerase III 62 kDa polypeptide, putative n=1
Tax=Ricinus communis RepID=B9R9A5_RICCO
Length = 485
Score = 174 bits (441), Expect = 5e-42
Identities = 84/161 (52%), Positives = 115/161 (71%)
Frame = +1
Query: 82 QWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNC 261
Q GIK+A +IT+HFG +VA VC+ LL++GPLT+ +V +TEL+ VKNSLLVLIQHNC
Sbjct: 5 QHGIKYATHIITNHFGNLVAKVCQCLLRKGPLTVQKVVEFTELNQTQVKNSLLVLIQHNC 64
Query: 262 VQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGR 441
VQ + + D+ K+ T Y+ LFDNILHR RF KF+ I+S++ C I +GLL +GR
Sbjct: 65 VQAYR----SGDDLKLTTHYIALFDNILHRVRFSKFLAIISQDFHKSCVDIVEGLLEHGR 120
Query: 442 LNLKQMVDRASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564
L +KQ+VDRA+ + D+V+E+LCKL+ RY+E CP E
Sbjct: 121 LTVKQIVDRANSRNSIGLDSVKENLCKLVNGRYIEHCPASE 161
[2][TOP]
>UniRef100_A7QXF4 Chromosome undetermined scaffold_222, whole genome shotgun sequence
n=1 Tax=Vitis vinifera RepID=A7QXF4_VITVI
Length = 510
Score = 166 bits (421), Expect = 9e-40
Identities = 89/167 (53%), Positives = 118/167 (70%), Gaps = 3/167 (1%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
M Q+G++ AV LI+ HFG +VA VC+ LL++G LTL ++R+TEL VK+ +LVLIQ
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60
Query: 253 HNCVQPFHF-QGVTIDES-KVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426
HNCVQ F Q V E+ +V TQY+ LF NILHR RF KF+ IVSEEL +C +I +GL
Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120
Query: 427 LHNGRLNLKQMVDRA-SQEKAEAEDTVRESLCKLLMARYVERCPIPE 564
L +GRL L+Q++DRA S +K +D +RES KL+ A +VERCP E
Sbjct: 121 LQHGRLTLEQILDRAKSNQKPVVQDALRESFLKLVRAHFVERCPASE 167
[3][TOP]
>UniRef100_UPI0001986342 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001986342
Length = 524
Score = 166 bits (420), Expect = 1e-39
Identities = 89/170 (52%), Positives = 118/170 (69%), Gaps = 6/170 (3%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
M Q+G++ AV LI+ HFG +VA VC+ LL++G LTL ++R+TEL VK+ +LVLIQ
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60
Query: 253 HNCVQPFHFQG-VTIDES-KVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426
HNCVQ F Q V E+ +V TQY+ LF NILHR RF KF+ IVSEEL +C +I +GL
Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120
Query: 427 LHNGRLNLKQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCPIPE 564
L +GRL L+Q++DRA ++E E D +RES KL+ A +VERCP E
Sbjct: 121 LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASE 170
[4][TOP]
>UniRef100_B9ID92 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9ID92_POPTR
Length = 519
Score = 166 bits (419), Expect = 2e-39
Identities = 87/166 (52%), Positives = 118/166 (71%), Gaps = 3/166 (1%)
Frame = +1
Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255
V Q+GIK+AV +IT+HFG +VA VC+ LLK+GPL L +VRYTELS V+N LLVLIQH
Sbjct: 1 VSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQH 60
Query: 256 NCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429
NC+QPF +G + +KV + Y+VLFDN+LHR RF KFM IVS+E C + + LL
Sbjct: 61 NCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETLL 120
Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564
+GRL+ +Q+ D + + + ++E++ KL+MARYVERCPI E
Sbjct: 121 QHGRLSSEQIFDGFRDRSSSGGMEALQENMHKLVMARYVERCPISE 166
[5][TOP]
>UniRef100_A5C7H5 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C7H5_VITVI
Length = 721
Score = 163 bits (412), Expect = 1e-38
Identities = 87/168 (51%), Positives = 116/168 (69%), Gaps = 4/168 (2%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
M Q+G++ AV LI+ HFG +VA VC+ LL++G TL ++R+TEL VK+ +LVLIQ
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTXTLASVIRFTELPPQQVKSCILVLIQ 60
Query: 253 HNCVQPFHF-QGVTIDES-KVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426
HNCVQ F Q V E+ +V TQY+ LF NILHR RF KF+ IVSEEL +C +I +GL
Sbjct: 61 HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120
Query: 427 LHNGRLNLKQMVDRASQEKAE--AEDTVRESLCKLLMARYVERCPIPE 564
L +GRL L+Q++DRA + E +D +RES KL+ A +VERCP E
Sbjct: 121 LQHGRLTLEQILDRAKSNQREPVVQDALRESFLKLVRAHFVERCPASE 168
[6][TOP]
>UniRef100_UPI00019831C0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019831C0
Length = 458
Score = 152 bits (385), Expect = 1e-35
Identities = 82/170 (48%), Positives = 110/170 (64%), Gaps = 2/170 (1%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
M ++GIK AV LI+ FG A VC+ LL++G L LD +VR +LS VK L VLIQ
Sbjct: 1 MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60
Query: 253 HNCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426
HNCVQ F +G + V TQY++LFDNILHR RFPK + IVS+EL +C ++F+
Sbjct: 61 HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120
Query: 427 LHNGRLNLKQMVDRASQEKAEAEDTVRESLCKLLMARYVERCPIPEVSIV 576
L +G L L+Q++DR + E +D +R S KL+ A YVERCP P+ +V
Sbjct: 121 LKHGWLTLQQILDRVPSNQNEVQDALRGSFTKLVNAHYVERCPAPDPFLV 170
[7][TOP]
>UniRef100_A7NWI5 Chromosome chr5 scaffold_2, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NWI5_VITVI
Length = 528
Score = 148 bits (373), Expect = 3e-34
Identities = 83/174 (47%), Positives = 110/174 (63%), Gaps = 6/174 (3%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
M ++GIK AV LI+ FG A VC+ LL++G L LD +VR +LS VK L VLIQ
Sbjct: 1 MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60
Query: 253 HNCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426
HNCVQ F +G + V TQY++LFDNILHR RFPK + IVS+EL +C ++F+
Sbjct: 61 HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120
Query: 427 LHNGRLNLKQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCPIPEVSIV 576
L +G L L+Q++DR + E E D +R S KL+ A YVERCP P+ +V
Sbjct: 121 LKHGWLTLQQILDRVPSNQNEGEPFVQDALRGSFTKLVNAHYVERCPAPDPFLV 174
[8][TOP]
>UniRef100_A5ASC9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5ASC9_VITVI
Length = 549
Score = 147 bits (372), Expect = 5e-34
Identities = 82/174 (47%), Positives = 111/174 (63%), Gaps = 6/174 (3%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
M ++GIK AV LI+ FG A VC+ L+++G L LD +VR T+LS VK L VLIQ
Sbjct: 1 MTPEYGIKLAVHLISTDFGDHAAKVCDCLIRKGTLALDDIVRTTKLSPQQVKTYLKVLIQ 60
Query: 253 HNCVQPF--HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGL 426
HNCVQ F +G + V TQY++LFDNILHR RFPK + IVS+EL +C ++F+
Sbjct: 61 HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEKLFEAF 120
Query: 427 LHNGRLNLKQMVDRASQEKAE----AEDTVRESLCKLLMARYVERCPIPEVSIV 576
L +G L L+Q++DR + E +D +R S KL+ A YVERCP P+ +V
Sbjct: 121 LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLV 174
[9][TOP]
>UniRef100_B8A7K6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8A7K6_ORYSI
Length = 476
Score = 143 bits (360), Expect = 1e-32
Identities = 82/169 (48%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
MV Q GI AV +I+DHFG +V+ VC LL+ G L L +VR ELS VKNSLLVLIQ
Sbjct: 1 MVSQHGILLAVAIISDHFGSLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60
Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432
HNCVQ F+ D K T YL +FDNI+HR RF KF+ I+ ++ + A + +GLL
Sbjct: 61 HNCVQAFNAPRGNGD--KTVTHYLAIFDNIVHRQRFSKFLSIIRADIPESEA-LLEGLLQ 117
Query: 433 NGRLNLKQMVDRASQEKAE-----AEDTVRESLCKLLMARYVERCPIPE 564
NGRL Q+V+R + E A + +R + KL+ A YVERCP PE
Sbjct: 118 NGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPE 166
[10][TOP]
>UniRef100_Q5QM91 Os01g0679000 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q5QM91_ORYSJ
Length = 506
Score = 142 bits (359), Expect = 1e-32
Identities = 82/169 (48%), Positives = 105/169 (62%), Gaps = 5/169 (2%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
MV Q GI AV +I+DHFG +V+ VC LL+ G L L +VR ELS VKNSLLVLIQ
Sbjct: 1 MVSQHGILLAVAIISDHFGPLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60
Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432
HNCVQ F+ D K T YL +FDNI+HR RF KF+ I+ ++ + A + +GLL
Sbjct: 61 HNCVQAFNAPRGNGD--KTVTHYLAIFDNIVHRQRFSKFLSIIRADIPESEA-LLEGLLQ 117
Query: 433 NGRLNLKQMVDRASQEKAE-----AEDTVRESLCKLLMARYVERCPIPE 564
NGRL Q+V+R + E A + +R + KL+ A YVERCP PE
Sbjct: 118 NGRLTFGQLVERTISKVPEGSITPAREEIRMNFNKLVFAHYVERCPKPE 166
[11][TOP]
>UniRef100_Q9SMT8 RNA polymerase III subunit-like protein n=1 Tax=Arabidopsis
thaliana RepID=Q9SMT8_ARATH
Length = 529
Score = 141 bits (356), Expect = 3e-32
Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
Frame = +1
Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVH--VKNSLLVLI 249
+ ++GI +A+ +IT FG +V+ VCE LL++GPL+ + R E H VK+ L +LI
Sbjct: 1 MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 60
Query: 250 QHNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429
QHNCVQ F + ESK QY+VLF+NILHR R+ KF IV+EEL KC + GLL
Sbjct: 61 QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGLL 120
Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564
NGRL L Q ++R + +R+SL KL+ AR+VER P PE
Sbjct: 121 SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPE 166
[12][TOP]
>UniRef100_Q8LPK6 RNA polymerase III subunit-like protein n=1 Tax=Arabidopsis
thaliana RepID=Q8LPK6_ARATH
Length = 523
Score = 141 bits (356), Expect = 3e-32
Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
Frame = +1
Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVH--VKNSLLVLI 249
+ ++GI +A+ +IT FG +V+ VCE LL++GPL+ + R E H VK+ L +LI
Sbjct: 3 MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 62
Query: 250 QHNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429
QHNCVQ F + ESK QY+VLF+NILHR R+ KF IV+EEL KC + GLL
Sbjct: 63 QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGLL 122
Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564
NGRL L Q ++R + +R+SL KL+ AR+VER P PE
Sbjct: 123 SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPE 168
[13][TOP]
>UniRef100_Q8LE81 RNA polymerase III subunit-like protein n=1 Tax=Arabidopsis
thaliana RepID=Q8LE81_ARATH
Length = 521
Score = 140 bits (353), Expect = 7e-32
Identities = 76/166 (45%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
Frame = +1
Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVH--VKNSLLVLI 249
+ ++GI +A+ +IT FG +V+ VCE LL++GPL+ + R E H VK+ L +LI
Sbjct: 1 MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 60
Query: 250 QHNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLL 429
QHNCVQ F + ESK QY+VLF+NILHR R+ KF IV+E+L KC + GLL
Sbjct: 61 QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEQLDSKCGAVLDGLL 120
Query: 430 HNGRLNLKQMVDR-ASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564
NGRL L Q ++R + +R+SL KL+ AR+VER P PE
Sbjct: 121 SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPE 166
[14][TOP]
>UniRef100_C5XGQ0 Putative uncharacterized protein Sb03g031160 n=1 Tax=Sorghum
bicolor RepID=C5XGQ0_SORBI
Length = 506
Score = 129 bits (325), Expect = 1e-28
Identities = 77/169 (45%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
MV Q GI AV +I+DHFG IV+ VC LL+ G L+L + R ELS VKNSLL+LIQ
Sbjct: 1 MVSQHGILLAVNIISDHFGPIVSKVCGCLLRHGALSLLEIGRRLELSPAQVKNSLLILIQ 60
Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432
HNCVQ + D K T YL +FDN+LHR RF KF+ +V ++ + + +GLL
Sbjct: 61 HNCVQAYTSPRGGGD--KTVTLYLAIFDNVLHRLRFSKFLSVVRVDIPES-EVLLEGLLQ 117
Query: 433 NGRLNLKQMVDRASQEKAE-----AEDTVRESLCKLLMARYVERCPIPE 564
NGRL +Q+V+R + E + +R + KL+ A YVERCP E
Sbjct: 118 NGRLTFEQLVERTIFKVPEGSPLPTREEIRMNFNKLVYAHYVERCPKSE 166
[15][TOP]
>UniRef100_B9EYL3 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9EYL3_ORYSJ
Length = 423
Score = 129 bits (325), Expect = 1e-28
Identities = 76/164 (46%), Positives = 97/164 (59%)
Frame = +1
Query: 73 MVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQ 252
MV Q GI AV +I+DHFG +V+ VC LL+ G L L +VR ELS VKNSLLVLIQ
Sbjct: 1 MVSQHGILLAVAIISDHFGPLVSKVCRCLLRHGALPLQEIVRRLELSPGQVKNSLLVLIQ 60
Query: 253 HNCVQPFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLH 432
HNCVQ F+ D K T YL +FDNI+HR RF KF+ I+ ++ + A + +GLL
Sbjct: 61 HNCVQAFNAPRGNGD--KTVTHYLAIFDNIVHRQRFSKFLSIIRADIPESEA-LLEGLLQ 117
Query: 433 NGRLNLKQMVDRASQEKAEAEDTVRESLCKLLMARYVERCPIPE 564
NG + A + +R + KL+ A YVERCP PE
Sbjct: 118 NGSI-------------TPAREEIRMNFNKLVFAHYVERCPKPE 148
[16][TOP]
>UniRef100_A9TAL8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TAL8_PHYPA
Length = 520
Score = 117 bits (293), Expect = 7e-25
Identities = 63/146 (43%), Positives = 96/146 (65%), Gaps = 3/146 (2%)
Frame = +1
Query: 145 VCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQPF--HFQGVTIDESKVKTQ 318
V + L+ +GPL L + R++EL+ +K+SLLVL+QH+CVQ + +GV +V T
Sbjct: 4 VVKCLVYRGPLALADIARFSELNPSTLKSSLLVLVQHSCVQAYKVEHEGVGSAPPRVSTS 63
Query: 319 YLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNLKQMVDR-ASQEKAEAE 495
Y+ L DNILHR RFPKF+ V E+LG++ + +GLL +GRL L+Q+ R A++ +
Sbjct: 64 YVPLCDNILHRMRFPKFLLAVREDLGEEVGSLVEGLLEHGRLTLEQITQRTAAKAGKKVV 123
Query: 496 DTVRESLCKLLMARYVERCPIPEVSI 573
V+E+ KL+ AR++ERCP E S+
Sbjct: 124 KGVKETFAKLVAARFIERCPAAEPSL 149
[17][TOP]
>UniRef100_Q55FJ5 DNA-directed RNA polymerase III subunit rpc3 n=1 Tax=Dictyostelium
discoideum RepID=RPC3_DICDI
Length = 666
Score = 70.1 bits (170), Expect = 1e-10
Identities = 52/178 (29%), Positives = 89/178 (50%), Gaps = 22/178 (12%)
Frame = +1
Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTE----LSTVHVKNSLLVLIQHNC 261
K A+ ++ + FG V V E L+++G + ++ + L+ +K LLVLIQHN
Sbjct: 5 KVAIDIVKESFGDDVTKVFEFLVQRGKSSYKIINQSLSGKGGLTIKRIKQCLLVLIQHNL 64
Query: 262 VQPFHFQ-GVTIDESKV---------KTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQ 411
V F +T DE + + Y + N +HR RFPKF+ + GD+ A
Sbjct: 65 VTYEEFLLPLTKDEIEKLVPGEPLPSDSVYEAIIVNAIHRLRFPKFINYIKHSKGDEAAY 124
Query: 412 IFKGLLHNGRLNLKQMVDRASQ----EKAEAEDTV----RESLCKLLMARYVERCPIP 561
I + L+ +GRL + ++ +ASQ + E +D + ++ KL+M +++ R P P
Sbjct: 125 ILEELIDHGRLPMDLLIKQASQIQRVDTFEDQDDITKRFEDTFTKLIMDQFIMRAPRP 182
[18][TOP]
>UniRef100_UPI00015A634F DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III
subunit C3) (DNA-directed RNA polymerase III subunit C).
n=1 Tax=Danio rerio RepID=UPI00015A634F
Length = 539
Score = 67.0 bits (162), Expect = 1e-09
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270
++ LL+ +HFG +V NV L++ G LTL L T+L+ VK SL VL+QH
Sbjct: 6 VRLCGLLLQEHFGDVVENVGTHLIRNGVLTLRALAHETKLALDLVKKSLCVLVQHGMCT- 64
Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450
G +Y + ++ILH R+P+++ GD I + +L G++ +
Sbjct: 65 ---FGPGRRGPAGPVEYHINCEHILHMLRYPRYIYTAKSLYGDTGELIVEEILQRGQMTM 121
Query: 451 ----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555
K + DR + E + + V + +L+ +++RCP
Sbjct: 122 SSTVKTVADRLTHNMPEGQSMDYNEVVSAFSRLVETHFLQRCP 164
[19][TOP]
>UniRef100_Q7ZUX1 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Danio rerio
RepID=RPC3_DANRE
Length = 539
Score = 67.0 bits (162), Expect = 1e-09
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270
++ LL+ +HFG +V NV L++ G LTL L T+L+ VK SL VL+QH
Sbjct: 6 VRLCGLLLQEHFGDVVENVGTHLIRNGVLTLRALAHETKLALDLVKKSLCVLVQHGMCT- 64
Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450
G +Y + ++ILH R+P+++ GD I + +L G++ +
Sbjct: 65 ---FGPGRRGPAGPVEYHINCEHILHMLRYPRYIYTAKSLYGDTGELIVEEILQRGQMTM 121
Query: 451 ----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555
K + DR + E + + V + +L+ +++RCP
Sbjct: 122 SSTVKTVADRLTHNMPEGQSMDYNEVVSAFSRLVETHFLQRCP 164
[20][TOP]
>UniRef100_Q5CFR3 Putative uncharacterized protein n=1 Tax=Cryptosporidium hominis
RepID=Q5CFR3_CRYHO
Length = 618
Score = 66.6 bits (161), Expect = 1e-09
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 18/150 (12%)
Frame = +1
Query: 109 LITDHFGKIVANVCEKLLKQGPLTLD----LLVRYTELST----------VHVKNSLLVL 246
+I+ HFG + A + +KLL GPL +D L+++ E S + +NS++ L
Sbjct: 11 IISTHFGGLPAMIIKKLLVNGPLPMDRLYHLVIKDKESSKYLSSNSKDNFLSFRNSMMYL 70
Query: 247 IQHNCVQPFHFQGVTIDESKVKTQYLVLF----DNILHRARFPKFMEIVSEELGDKCAQI 414
+ H C+ + I+ K V+F D+++ R RFP +M + + LG+ C I
Sbjct: 71 VHHYCIIYYEISDPNIELDNSKEGKNVVFEVNIDHVISRLRFPLYMAHIEKLLGETCKYI 130
Query: 415 FKGLLHNGRLNLKQMVDRASQEKAEAEDTV 504
F ++ +GR++ K ++ S+ E+ +
Sbjct: 131 FMEVIKHGRISTKILISELSETVENIEENI 160
[21][TOP]
>UniRef100_UPI00017B1A1A UPI00017B1A1A related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B1A1A
Length = 537
Score = 66.2 bits (160), Expect = 2e-09
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHN-CVQ 267
++ LL+ +HFG++V V LLK G L ++ T + VK +L VL+QH CV
Sbjct: 6 VRLCGLLLREHFGEVVEKVGTHLLKSGAQNLRTILHETGMPLDLVKKALCVLVQHGICV- 64
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
F +G T Y D IL R+P+++ GD I + LL G +
Sbjct: 65 -FRHRG-----PGRPTDYQSSCDRILRILRYPRYIYTAKTLYGDTGELIVEELLQRGEMT 118
Query: 448 L----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555
+ K + DR +Q + + V + CKL+ +++RCP
Sbjct: 119 MSRTVKTVADRLTQNMEDGQSMDYSEVSSAFCKLVETHFLQRCP 162
[22][TOP]
>UniRef100_Q4RBZ5 Chromosome 8 SCAF20216, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4RBZ5_TETNG
Length = 542
Score = 66.2 bits (160), Expect = 2e-09
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHN-CVQ 267
++ LL+ +HFG++V V LLK G L ++ T + VK +L VL+QH CV
Sbjct: 6 VRLCGLLLREHFGEVVEKVGTHLLKSGAQNLRTILHETGMPLDLVKKALCVLVQHGICV- 64
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
F +G T Y D IL R+P+++ GD I + LL G +
Sbjct: 65 -FRHRG-----PGRPTDYQSSCDRILRILRYPRYIYTAKTLYGDTGELIVEELLQRGEMT 118
Query: 448 L----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555
+ K + DR +Q + + V + CKL+ +++RCP
Sbjct: 119 MSRTVKTVADRLTQNMEDGQSMDYSEVSSAFCKLVETHFLQRCP 162
[23][TOP]
>UniRef100_UPI0000F33751 DNA-directed RNA polymerase III subunit C (EC 2.7.7.6). n=1 Tax=Bos
taurus RepID=UPI0000F33751
Length = 533
Score = 65.5 bits (158), Expect = 3e-09
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y + +L R+P+++ D I + LL NG++
Sbjct: 66 QVHKRGV--------VEYEAQCNRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558
+ +V + + E + V + +L+ +V+RCP+
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLVDTHFVQRCPL 162
[24][TOP]
>UniRef100_Q5XIL3 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Rattus
norvegicus RepID=RPC3_RAT
Length = 533
Score = 65.5 bits (158), Expect = 3e-09
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T+ S VK +L VLI HN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTKASLDQVKKALCVLIHHNLVIY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ GD I + LL NG++
Sbjct: 66 HVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELLLNGKMT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558
+ +V + + E + V + +L +V+RCP+
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPL 162
[25][TOP]
>UniRef100_Q2TBL4 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Bos taurus
RepID=RPC3_BOVIN
Length = 533
Score = 65.5 bits (158), Expect = 3e-09
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVTY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y + +L R+P+++ D I + LL NG++
Sbjct: 66 QVHKRGV--------VEYEAQCNRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558
+ +V + + E + V + +L+ +V+RCP+
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLVDTHFVQRCPL 162
[26][TOP]
>UniRef100_Q5CQM8 Putative uncharacterized protein n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CQM8_CRYPV
Length = 618
Score = 65.1 bits (157), Expect = 4e-09
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 18/150 (12%)
Frame = +1
Query: 109 LITDHFGKIVANVCEKLLKQGPLTLD----LLVRYTELST----------VHVKNSLLVL 246
+I+ HFG + A + +KL+ GPL +D L+++ E S + +NS++ L
Sbjct: 11 IISTHFGGLPAIIIKKLVVNGPLPMDRLYHLVIKDKESSKYLSSNSKNNFLSFRNSMMYL 70
Query: 247 IQHNCVQPFHFQGVTIDESKVKTQYLVLF----DNILHRARFPKFMEIVSEELGDKCAQI 414
+ H C+ + I+ K V+F D+++ R RFP +M + + LG+ C I
Sbjct: 71 VHHYCIIYYEISDPNIELDNSKEGKNVVFEVNIDHVISRLRFPLYMAHIEKLLGETCKYI 130
Query: 415 FKGLLHNGRLNLKQMVDRASQEKAEAEDTV 504
F ++ +GR++ K ++ S+ E+ +
Sbjct: 131 FMEVIKHGRISTKILISELSETVENIEENI 160
[27][TOP]
>UniRef100_Q9D483-2 Isoform 2 of DNA-directed RNA polymerase III subunit RPC3 n=1
Tax=Mus musculus RepID=Q9D483-2
Length = 202
Score = 65.1 bits (157), Expect = 4e-09
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T+ S VK +L VLI HN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLVRTGSQPLRVIAHDTKASLDQVKKALCVLIHHNLVLY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ GD I + LL NG++
Sbjct: 66 HVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELLLNGKMT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558
+ +V + + E + V + +L +V+RCP+
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPL 162
[28][TOP]
>UniRef100_Q9D483 DNA-directed RNA polymerase III subunit RPC3 n=2 Tax=Mus musculus
RepID=RPC3_MOUSE
Length = 533
Score = 65.1 bits (157), Expect = 4e-09
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T+ S VK +L VLI HN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLVRTGSQPLRVIAHDTKASLDQVKKALCVLIHHNLVLY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ GD I + LL NG++
Sbjct: 66 HVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELLLNGKMT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCPI 558
+ +V + + E + V + +L +V+RCP+
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPL 162
[29][TOP]
>UniRef100_UPI0000E1EB08 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD)
isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1EB08
Length = 467
Score = 64.3 bits (155), Expect = 7e-09
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG+L
Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[30][TOP]
>UniRef100_UPI0000E1EB07 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD)
isoform 4 n=1 Tax=Pan troglodytes RepID=UPI0000E1EB07
Length = 508
Score = 64.3 bits (155), Expect = 7e-09
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG+L
Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[31][TOP]
>UniRef100_UPI0000141956 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide C (62kD)
isoform 1 n=1 Tax=Pan troglodytes RepID=UPI0000141956
Length = 411
Score = 64.3 bits (155), Expect = 7e-09
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG+L
Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[32][TOP]
>UniRef100_Q9BT08 POLR3C protein n=1 Tax=Homo sapiens RepID=Q9BT08_HUMAN
Length = 411
Score = 64.3 bits (155), Expect = 7e-09
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG+L
Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[33][TOP]
>UniRef100_Q9BUI4 DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Homo sapiens
RepID=RPC3_HUMAN
Length = 534
Score = 64.3 bits (155), Expect = 7e-09
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VL+QHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG+L
Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[34][TOP]
>UniRef100_Q53F76 Polymerase (RNA) III (DNA directed) polypeptide C (62kD) variant
(Fragment) n=1 Tax=Homo sapiens RepID=Q53F76_HUMAN
Length = 534
Score = 63.9 bits (154), Expect = 9e-09
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQ- 267
IK LL+ +HFG+IV + +L++ G L ++ T S VK +L VL QHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVRLIRTGSQPLRVIAHDTGTSLDQVKKALCVLAQHNLVSY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG+L
Sbjct: 66 QVHKRGVV--------EYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[35][TOP]
>UniRef100_UPI0001796003 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide C (62kD) n=1 Tax=Equus caballus
RepID=UPI0001796003
Length = 558
Score = 63.5 bits (153), Expect = 1e-08
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V
Sbjct: 30 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 89
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG++
Sbjct: 90 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 141
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 142 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 185
[36][TOP]
>UniRef100_UPI0000EB27D6 DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III
subunit C3) (DNA-directed RNA polymerase III subunit C)
(DNA-directed III 62 kDa polypeptide) (RPC62). n=1
Tax=Canis lupus familiaris RepID=UPI0000EB27D6
Length = 411
Score = 63.5 bits (153), Expect = 1e-08
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG++
Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[37][TOP]
>UniRef100_UPI00004BC9F0 PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide C (62kD) n=1 Tax=Canis lupus familiaris
RepID=UPI00004BC9F0
Length = 534
Score = 63.5 bits (153), Expect = 1e-08
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++ T S VK +L VLIQHN V
Sbjct: 6 IKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQHNLVIY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +GV +Y +L R+P+++ D I + LL NG++
Sbjct: 66 QVHKRGV--------VEYEAQCSRVLRMLRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117
Query: 448 LKQMVDRASQEKAEAED--------TVRESLCKLLMARYVERCP 555
+ +V + + E + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCP 161
[38][TOP]
>UniRef100_Q6DJJ8 Polr3c-prov protein n=1 Tax=Xenopus laevis RepID=Q6DJJ8_XENLA
Length = 529
Score = 63.5 bits (153), Expect = 1e-08
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Frame = +1
Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-QP 270
K LL+ +H+G+IVA V L++ G L ++V T S VK +L VLIQHN V
Sbjct: 7 KLCSLLLEEHYGEIVARVGTFLIRTGNQPLRVIVNETGTSLDQVKKALCVLIQHNLVTYQ 66
Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450
+ +G +Y D LH R+P+++ GD I + L NG++ L
Sbjct: 67 LNKRGF--------VEYRAHCDRFLHILRYPRYIYTAKTLYGDTGELIVEELQLNGKMTL 118
Query: 451 KQMVDRASQEKAEA-EDT-------VRESLCKLLMARYVERCP 555
+V + + E ED+ V + L +V+RCP
Sbjct: 119 SAVVKKVADRLTETMEDSKSMEYSEVSATFTHLADTHFVQRCP 161
[39][TOP]
>UniRef100_UPI00005EB3DE PREDICTED: similar to Polymerase (RNA) III (DNA directed)
polypeptide C (62kD) n=1 Tax=Monodelphis domestica
RepID=UPI00005EB3DE
Length = 535
Score = 63.2 bits (152), Expect = 1e-08
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV-Q 267
IK LL+ +HFG+IV + L++ G L ++V T S VK +L VLIQHN V
Sbjct: 6 IKLCSLLLQEHFGEIVDKIGTHLIRTGGQPLRVIVHDTGTSLDQVKKALCVLIQHNLVTY 65
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
H +G+ +Y IL R+P+++ D I + LL NG++
Sbjct: 66 QIHKRGI--------VEYEAHCSRILRILRYPRYIYTAKTLYSDTGELIVEELLLNGKMT 117
Query: 448 L----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555
+ K++ DR ++ + + V + +L +V+RCP
Sbjct: 118 MSAVVKKVADRLTETMEDGKTMDYSEVSSTFGRLADTHFVQRCP 161
[40][TOP]
>UniRef100_C1FE42 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FE42_9CHLO
Length = 493
Score = 60.8 bits (146), Expect = 7e-08
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Frame = +1
Query: 58 VSPNKMVQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSL 237
+S ++ Q+ I A ++T+ FGK +C +L G TL V+ T LS + +L
Sbjct: 1 MSHQRIHDQYEISLACGIVTESFGKDPGKICRAMLYHGSRTLRETVQETGLSPSRSQRAL 60
Query: 238 LVLIQHNCVQPFHFQGVTIDESK--VKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQ 411
L+L QHN V + I ES+ + QY IL R R+P+++ E
Sbjct: 61 LILAQHNVV-------LVIPESRDEDECQYYTKLGVILERLRYPQYLLFAQEHYRGSHNL 113
Query: 412 IFKGLLHNGRLNLKQMV 462
+ + LL NGRL+ Q++
Sbjct: 114 LIECLLENGRLDEHQLM 130
[41][TOP]
>UniRef100_UPI0000E4A606 PREDICTED: hypothetical protein n=2 Tax=Strongylocentrotus
purpuratus RepID=UPI0000E4A606
Length = 532
Score = 60.1 bits (144), Expect = 1e-07
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270
+K LL+ +HFG +V +C LLK G +V + VK +L VLIQHN V+
Sbjct: 6 LKLVSLLVQEHFGDVVEKICTHLLKNGSNNFRSVVSTVKEKPEQVKKALCVLIQHNIVK- 64
Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450
G+ + +Y + L R+P+++ GD I + +LH+G + +
Sbjct: 65 ---YGL---NKRGMVEYTADVEKALLLVRYPRYIYSAKTLYGDIGELIVEEVLHHGEILM 118
Query: 451 KQMVDRASQEKAEAED-------TVRESLCKLLMARYVERCP 555
+V++ EA + +++ L+ +++R P
Sbjct: 119 SNVVEKVKVRLKEAMEGNQLEPSAIKDKFIDLVNTHFLQRLP 160
[42][TOP]
>UniRef100_UPI00016E2BA8 UPI00016E2BA8 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E2BA8
Length = 538
Score = 59.7 bits (143), Expect = 2e-07
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Frame = +1
Query: 91 IKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQP 270
++ LL+ +HFG++V + LL+ G L ++ T + VK L VL+Q N V
Sbjct: 6 VRLCGLLLREHFGEVVEKLGTHLLRSGSQNLRTILHETGMPRDLVKKVLCVLVQ-NGVCV 64
Query: 271 FHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNL 450
F+ +G T Y + IL R+P+++ GD I + LL G + +
Sbjct: 65 FNHRG-----PGRPTNYQANSNKILRILRYPRYIYTAKTLYGDTGELIIEELLQRGEMTM 119
Query: 451 ----KQMVDRASQEKAEAE----DTVRESLCKLLMARYVERCP 555
K + DR +Q + + V + CKL+ +++RCP
Sbjct: 120 SRTVKTVADRLTQNMEDGQCMDYSEVSSAFCKLVETHFLQRCP 162
[43][TOP]
>UniRef100_B0DSC2 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DSC2_LACBS
Length = 539
Score = 57.8 bits (138), Expect = 6e-07
Identities = 42/151 (27%), Positives = 74/151 (49%)
Frame = +1
Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQPF 273
+ V +I +FG + A + LL +G L L L R+T L V+ +LVL+QHN + +
Sbjct: 8 RLCVEIIHSNFGPLTAKIASVLLVRGRLPLPQLTRFTALRPRTVRACILVLVQHNII--W 65
Query: 274 HFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNLK 453
H V DE ++ + V D L R RF KF+ E G A++ + +L +G+L +
Sbjct: 66 H---VLSDEGEM---FEVNIDECLMRLRFGKFIYKSEELFGKPAAEVVQVILDHGKLKMP 119
Query: 454 QMVDRASQEKAEAEDTVRESLCKLLMARYVE 546
++ + +++ KL+ Y++
Sbjct: 120 DIMALLGIYDGKGIIAYTQAIHKLVSGHYLK 150
[44][TOP]
>UniRef100_C4JMM9 Predicted protein n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JMM9_UNCRE
Length = 652
Score = 56.2 bits (134), Expect = 2e-06
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Frame = +1
Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255
+ Q+ + LLITD+FG++ + + LL G L +V+ T LS VK+ L+VLIQ
Sbjct: 1 MSQYAAELCKLLITDNFGELYSLIFSYLLHHGRQPLPRIVQNTHLSPRQVKHGLVVLIQQ 60
Query: 256 NCVQPFHF----QGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKG 423
+ V FH G+T ES + Y + R KF ++V LG A++F
Sbjct: 61 HLV--FHCTSFDDGITYYESDWRAAY--------NLVRPGKFTQLVKNRLGKHAARVFST 110
Query: 424 LLHNGRLNLKQM 459
+L G + +
Sbjct: 111 ILSLGHAKISYL 122
[45][TOP]
>UniRef100_UPI00019264DC PREDICTED: similar to polymerase (RNA) III (DNA directed)
polypeptide C n=1 Tax=Hydra magnipapillata
RepID=UPI00019264DC
Length = 590
Score = 55.8 bits (133), Expect = 2e-06
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Frame = +1
Query: 100 AVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCVQPFHF 279
A+ +I DHFG I V LL+ G +L + ++S VK L++LIQHN
Sbjct: 125 ALQIINDHFGDISEQVVAYLLQNGQRSLKDICDNVKISKDEVKKVLVILIQHNL------ 178
Query: 280 QGVTIDESKVK-TQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLNLKQ 456
V+ ++ K K T+Y NI+ R F +++ I + GD I + LL NG L +
Sbjct: 179 --VSFNKYKNKFTEYHTELHNIIRRRSFQRYIYIAKLKHGDIGELIIEKLLLNGCDTLSK 236
Query: 457 MVDRASQEKAEAED 498
+ R + E+ E +D
Sbjct: 237 VAKRVT-ERLEVDD 249
[46][TOP]
>UniRef100_C5P7T7 RNA polymerase III subunit RPC82 family protein n=1
Tax=Coccidioides posadasii C735 delta SOWgp
RepID=C5P7T7_COCP7
Length = 653
Score = 55.8 bits (133), Expect = 2e-06
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Frame = +1
Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255
+ Q+ + LLITD+FG++ A + LL G L +V+ T LS VK+ L VL+Q
Sbjct: 1 MSQYAAELCKLLITDNFGELYALIFIYLLNHGRQPLPRIVQNTHLSPRQVKHGLAVLVQQ 60
Query: 256 NCVQPFHF----QGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKG 423
+ V FH G+T ES ++ Y + R K +++V E LG+ A I
Sbjct: 61 HLV--FHCTSLDDGITYYESNWRSAY--------NLVRSGKIIQLVEERLGNHAASIVST 110
Query: 424 LLHNGRLNLKQM 459
LL G + +
Sbjct: 111 LLALGHAKISYL 122
[47][TOP]
>UniRef100_Q1DTR6 DNA-directed RNA polymerase III subunit RPC-3 n=1 Tax=Coccidioides
immitis RepID=RPC3_COCIM
Length = 653
Score = 55.8 bits (133), Expect = 2e-06
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Frame = +1
Query: 76 VQQWGIKFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQH 255
+ Q+ + LLITD+FG++ A + LL G L +V+ T LS V++ L VL+Q
Sbjct: 1 MSQYAAELCKLLITDNFGELYALIFIYLLNHGRQPLPRIVQNTHLSPRQVRHGLAVLVQQ 60
Query: 256 NCVQPFHF----QGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKG 423
+ V FH G+T ES ++ Y + R K +++V E LG++ A I
Sbjct: 61 HLV--FHCTSLDDGITYYESNWRSAY--------NLVRSGKIIQLVEERLGNRAASIVST 110
Query: 424 LLHNGRLNLKQM 459
LL G + +
Sbjct: 111 LLALGHAKISYL 122
[48][TOP]
>UniRef100_UPI00006A0D0C DNA-directed RNA polymerase III subunit RPC3 (RNA polymerase III
subunit C3) (DNA-directed RNA polymerase III subunit C)
(DNA-directed III 62 kDa polypeptide) (RPC62). n=1
Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0D0C
Length = 435
Score = 54.3 bits (129), Expect = 7e-06
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Frame = +1
Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELS---TVHVKNSLLVLIQHNCV 264
K LL+ +H+G+IV V L++ G L ++ T S + VK +L VLIQHN V
Sbjct: 7 KLCSLLLQEHYGEIVDRVGTFLIRTGNQPLRVIANETGTSLDQAIPVKKALCVLIQHNLV 66
Query: 265 Q-PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGR 441
+ +G +Y D L R+P+++ GD I + LL NG+
Sbjct: 67 TYQLNKRGFV--------EYKAHVDRFLRILRYPRYIYTAKTLYGDTGELIVEELLLNGK 118
Query: 442 LNL----KQMVDRASQEKAEAE------DTVRESLCKLLMARYVERCP 555
+ L K++ DR + E EA+ V + L +V+RCP
Sbjct: 119 MTLSAAVKKVADRLT-ETMEADSLSMEYSEVSATFTHLADTHFVQRCP 165
[49][TOP]
>UniRef100_Q171Y0 DNA-directed RNA polymerase III, 62-kS-subunit, putative n=1
Tax=Aedes aegypti RepID=Q171Y0_AEDAE
Length = 507
Score = 53.9 bits (128), Expect = 9e-06
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Frame = +1
Query: 94 KFAVLLITDHFGKIVANVCEKLLKQGPLTLDLLVRYTELSTVHVKNSLLVLIQHNCV--Q 267
K ++ HFG +V V + L TL ++++ T LS V +L +L++ Q
Sbjct: 7 KLCSCIVQQHFGDVVRMVADDLFAAVAKTLSMVIKSTGLSKSEVCKALAILLKFGLARHQ 66
Query: 268 PFHFQGVTIDESKVKTQYLVLFDNILHRARFPKFMEIVSEELGDKCAQIFKGLLHNGRLN 447
P +++ T+Y++ ++ +L R+P+F+ ++ + G +CA + + LL G
Sbjct: 67 P--------NKAGSATEYILDYEKVLMVLRYPRFVHLIQTKYGPECATLTEELLRAGCQT 118
Query: 448 LKQMVDRASQ-EKAEAEDTV---RESLCKLLMARYVERCPIPE 564
++ + + + ++T+ RE L+ Y R P P+
Sbjct: 119 ASYVILKGTAISDVKDKNTITKFREKFSDLVAKNYFIRAPDPK 161