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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 250 bits (638), Expect = 6e-65
Identities = 113/194 (58%), Positives = 142/194 (73%), Gaps = 3/194 (1%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRP- 179
NFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINY+QRFGWFM+ P
Sbjct: 293 NFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPS 352
Query: 180 EGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTEA 359
+ T E +PSR+ N+ +K +C NF NAFAIMCATTGMHWG+CI+HFTW+W +TEA
Sbjct: 353 DKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFTWSWHRNTEA 412
Query: 360 SKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENW 533
K +S + H R +YDN+YSIPFEFGSFAGPV SGG P EAENW
Sbjct: 413 GKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFGSFAGPVISGGTPNEAENW 472
Query: 534 IKIHTTSWNWIHSI 575
+++ +TSW WIH++
Sbjct: 473 VRVQSTSWQWIHAV 486
[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 227 bits (579), Expect = 4e-58
Identities = 105/196 (53%), Positives = 139/196 (70%), Gaps = 5/196 (2%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRP 179
NFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP
Sbjct: 295 NFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRP 354
Query: 180 EG--TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDT 353
K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI+HF+W T
Sbjct: 355 PDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGT 414
Query: 354 EASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAE 527
++G++SF +GMG + HHGE + +S ++PFEFGSFAGPVTSGG PF +E
Sbjct: 415 SFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGPVTSGGTPFTSE 474
Query: 528 NWIKIHTTSWNWIHSI 575
NW+++ T W+W+ S+
Sbjct: 475 NWLRVETAHWDWLTSL 490
[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 227 bits (579), Expect = 4e-58
Identities = 105/196 (53%), Positives = 139/196 (70%), Gaps = 5/196 (2%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRP 179
NFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP
Sbjct: 1105 NFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRP 1164
Query: 180 EG--TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDT 353
K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI+HF+W T
Sbjct: 1165 PDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCILHFSWTLNKGT 1224
Query: 354 EASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAE 527
++G++SF +GMG + HHGE + +S ++PFEFGSFAGPVTSGG PF +E
Sbjct: 1225 SFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGPVTSGGTPFTSE 1284
Query: 528 NWIKIHTTSWNWIHSI 575
NW+++ T W+W+ S+
Sbjct: 1285 NWLRVETAHWDWLTSL 1300
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 209 bits (531), Expect = 2e-52
Identities = 96/193 (49%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPE 182
NFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INY+QRF W ++
Sbjct: 294 NFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECL 353
Query: 183 GTDKE--FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTE 356
K ++ +PSR+ NL K V+ TNFVNA AI+CATTGMH G C +HF+W W H E
Sbjct: 354 DNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAE 412
Query: 357 ASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWI 536
K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TSGGK EAENWI
Sbjct: 413 LGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITSGGKADEAENWI 472
Query: 537 KIHTTSWNWIHSI 575
+I + ++W+ S+
Sbjct: 473 EIQSPDFSWVASL 485
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 209 bits (531), Expect = 2e-52
Identities = 96/193 (49%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPE 182
NFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INY+QRF W ++
Sbjct: 1131 NFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECL 1190
Query: 183 GTDKE--FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTE 356
K ++ +PSR+ NL K V+ TNFVNA AI+CATTGMH G C +HF+W W H E
Sbjct: 1191 DNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTIHFSWLW-HPAE 1249
Query: 357 ASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWI 536
K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TSGGK EAENWI
Sbjct: 1250 LGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITSGGKADEAENWI 1309
Query: 537 KIHTTSWNWIHSI 575
+I + ++W+ S+
Sbjct: 1310 EIQSPDFSWVASL 1322
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 191 bits (485), Expect = 3e-47
Identities = 90/195 (46%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVR-- 176
NFG +G F++ L +P+APE +E+ F++YI IHGI+++ LC++INY Q F WFM+
Sbjct: 1127 NFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHL 1186
Query: 177 PEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTE 356
T + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +HF+W W + +
Sbjct: 1187 DTNTTGAVSLKIPARMANLTSKEVQVTNFVNALAIMCATTGMHFGKCTLHFSWGW-YRGK 1245
Query: 357 ASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAEN 530
+ G +S TGMG V H G F S+S+PF+FGSFAGP++ GG P AEN
Sbjct: 1246 LADQSGAVSLQTGMGRAAVAEHFGGKHNFCYPATSFSLPFQFGSFAGPISCGGAPMAAEN 1305
Query: 531 WIKIHTTSWNWIHSI 575
WI++ + WI S+
Sbjct: 1306 WIELIIPNMKWITSL 1320
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 190 bits (482), Expect = 8e-47
Identities = 89/195 (45%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPE 182
NFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM+
Sbjct: 294 NFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHL 353
Query: 183 GTDKE--FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTE 356
T+ + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +HF+W W
Sbjct: 354 DTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWNWFRGKL 413
Query: 357 ASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAEN 530
A + G S TGMG V H G F+ ++S+PF+FGSFAGP++ GG+P AEN
Sbjct: 414 ADQ-SGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPISCGGEPMAAEN 472
Query: 531 WIKIHTTSWNWIHSI 575
W+++ + WI S+
Sbjct: 473 WVRLQIPNMKWITSL 487
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 190 bits (482), Expect = 8e-47
Identities = 89/195 (45%), Positives = 127/195 (65%), Gaps = 4/195 (2%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPE 182
NFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM+
Sbjct: 1126 NFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHL 1185
Query: 183 GTDKE--FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTE 356
T+ + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +HF+W W
Sbjct: 1186 DTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTLHFSWNWFRGKL 1245
Query: 357 ASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAEN 530
A + G S TGMG V H G F+ ++S+PF+FGSFAGP++ GG+P AEN
Sbjct: 1246 ADQ-SGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPISCGGEPMAAEN 1304
Query: 531 WIKIHTTSWNWIHSI 575
W+++ + WI S+
Sbjct: 1305 WVRLQIPNMKWITSL 1319
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 186 bits (473), Expect = 8e-46
Identities = 94/193 (48%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRP 179
N G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INY+Q FGWF +VR
Sbjct: 119 NLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRR 178
Query: 180 EGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGK-CIVHFTWAWKHDTE 356
T+KE + +PSR++N+ K E N VNAF+IMCATTGM WG +H H T+
Sbjct: 179 STTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWGSPFALHLD---SHMTQ 235
Query: 357 ASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWI 536
A K S G+ T+ H G+ ++ + S IPFE GSFAGPVTSGG PFE+ENWI
Sbjct: 236 ADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFAGPVTSGGTPFESENWI 293
Query: 537 KIHTTSWNWIHSI 575
++ + W+W S+
Sbjct: 294 RVWSKHWDWFTSL 306
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 186 bits (473), Expect = 8e-46
Identities = 94/193 (48%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Frame = +3
Query: 3 NFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF-MVRP 179
N G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INY+Q FGWF +VR
Sbjct: 1139 NLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRR 1198
Query: 180 EGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGK-CIVHFTWAWKHDTE 356
T+KE + +PSR++N+ K E N VNAF+IMCATTGM WG +H H T+
Sbjct: 1199 STTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWGSPFALHLD---SHMTQ 1255
Query: 357 ASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWI 536
A K S G+ T+ H G+ ++ + S IPFE GSFAGPVTSGG PFE+ENWI
Sbjct: 1256 ADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFAGPVTSGGTPFESENWI 1313
Query: 537 KIHTTSWNWIHSI 575
++ + W+W S+
Sbjct: 1314 RVWSKHWDWFTSL 1326
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 122 bits (305), Expect = 3e-26
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEG 185
+G GA + L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V P
Sbjct: 307 YGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTT 366
Query: 186 TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHDTEAS 362
+ ++ + ++L + ++ T + NAF MC T+ MH+G I+HF+W + T A+
Sbjct: 367 STGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAA 426
Query: 363 KMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIK 539
G ++ G G ++ + G R FSIY+ ++P E G+FAGP F+ NWI+
Sbjct: 427 TAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKKLDFKYRNWIR 486
Query: 540 IHTTSWNWIHSI 575
T I SI
Sbjct: 487 FTTPKGRNISSI 498
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 120 bits (300), Expect = 1e-25
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEG 185
+G GA V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V P
Sbjct: 295 YGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTT 354
Query: 186 TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHDTEAS 362
+ ++ + ++L + ++ T + NAF MC T+ MH+G I+HF+W + T A+
Sbjct: 355 STGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAA 414
Query: 363 KMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIK 539
G ++ G G ++ + G R SIY+ ++P E G+FAGP F+ NWI+
Sbjct: 415 TAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFAGPTPLKKLDFKYRNWIR 474
Query: 540 IHTTSWNWIHSI 575
T I SI
Sbjct: 475 FTTPKGRNISSI 486
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 120 bits (300), Expect = 1e-25
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMVRPEG 185
+G GA V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V P
Sbjct: 978 YGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTT 1037
Query: 186 TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWA-WKHDTEAS 362
+ ++ + ++L + ++ T + NAF MC T+ MH+G I+HF+W + T A+
Sbjct: 1038 STGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSWTLFGGTTNAA 1097
Query: 363 KMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIK 539
G ++ G G ++ + G R SIY+ ++P E G+FAGP F+ NWI+
Sbjct: 1098 TAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFAGPTPLKKLDFKYRNWIR 1157
Query: 540 IHTTSWNWIHSI 575
T I SI
Sbjct: 1158 FTTPKGRNISSI 1169
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 59.3 bits (142), Expect = 2e-07
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 33 VIPLSSPMAPEKVESKFEFYIRIHGI--DSQPDLCKQINYRQRFGWFMV---RPEGTDKE 197
++PLS P+AP+ +EF + I+ DSQ + + + WF + +P+
Sbjct: 315 ILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHP-PMFSSAELYNWFTLTNLKPDANTGV 373
Query: 198 FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTEASKMKGN 377
+P + + K T N + + A TG H+G+ V +W +A +G+
Sbjct: 374 VNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGS 431
Query: 378 LSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKI 542
+S T + G+ R++ + IP GS+AG SG +N+++I
Sbjct: 432 VSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATPSGA--LGKQNYVRI 485
[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 59.3 bits (142), Expect = 2e-07
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 33 VIPLSSPMAPEKVESKFEFYIRIHGI--DSQPDLCKQINYRQRFGWFMV---RPEGTDKE 197
++PLS P+AP+ +EF + I+ DSQ + + + WF + +P+
Sbjct: 315 ILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHP-PMFSSSELYNWFTLTNLKPDANTGV 373
Query: 198 FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTEASKMKGN 377
+P + + K T N + + A TG H+G+ V +W +A +G+
Sbjct: 374 VNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGS 431
Query: 378 LSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKI 542
+S T + G+ R++ + IP GS+AG SG +N+++I
Sbjct: 432 VSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATPSGA--LGKQNYVRI 485
[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 58.5 bits (140), Expect = 3e-07
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 33 VIPLSSPMAPEKVESKFEFYIRIHGI--DSQPDLCKQINYRQRFGWFMV---RPEGTDKE 197
++PLS P+AP+ +EF + I DSQ + + + WF + +P+
Sbjct: 315 ILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHP-PMFSSAELYNWFTLTNLKPDANTGV 373
Query: 198 FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTEASKMKGN 377
+P + + K T N + + A TG H+G+ V +W +A +G+
Sbjct: 374 VNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGS 431
Query: 378 LSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKI 542
+S T + G+ R++ + IP GS+AG SG +N+++I
Sbjct: 432 VSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATPSGA--LGKQNYVRI 485
[17][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 58.5 bits (140), Expect = 3e-07
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 33 VIPLSSPMAPEKVESKFEFYIRIHGI--DSQPDLCKQINYRQRFGWFMV---RPEGTDKE 197
++PLS P+AP+ +EF + I DSQ + + + WF + +P+
Sbjct: 315 ILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHP-PMFSSAELYNWFTLTNLKPDANTGV 373
Query: 198 FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTEASKMKGN 377
+P + + K T N + + A TG H+G+ V +W +A +G+
Sbjct: 374 VNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--VDLCISWSRSKQAQAQEGS 431
Query: 378 LSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKI 542
+S T + G+ R++ + IP GS+AG SG +N+++I
Sbjct: 432 VSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATPSGA--LGKQNYVRI 485
[18][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 58.2 bits (139), Expect = 5e-07
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 33 VIPLSSPMAPEKVESKFEFYIRIHGI--DSQPDLCKQINYRQRFGWFMV---RPEGTDKE 197
++PLS P+AP+ +EF + I DSQ + + + WF + +P+
Sbjct: 313 ILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHP-PMFSSAELYNWFTLTNLKPDANTGV 371
Query: 198 FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTEASKMKGN 377
+P + + K T N + + A TG H+G+ V +W +A +G+
Sbjct: 372 VNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGS 429
Query: 378 LSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKI 542
+S T + G+ R++ + IP GS+AG SG +N+++I
Sbjct: 430 VSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATPSGA--LGKQNYVRI 483
[19][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 58.2 bits (139), Expect = 5e-07
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 33 VIPLSSPMAPEKVESKFEFYIRIHGI--DSQPDLCKQINYRQRFGWFMV---RPEGTDKE 197
++PLS P+AP+ +EF + I DSQ + + + WF + +P+
Sbjct: 901 ILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHP-PMFSSAELYNWFTLTNLKPDANTGV 959
Query: 198 FQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHDTEASKMKGN 377
+P + + K T N + + A TG H+G+ V +W +A +G+
Sbjct: 960 VNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--VDLCISWPRSKQAQAQEGS 1017
Query: 378 LSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKI 542
+S T + G+ R++ + IP GS+AG SG +N+++I
Sbjct: 1018 VSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATPSGA--LGKQNYVRI 1071