BB907818 ( RCE06228 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  335 bits (858), Expect = 2e-90
 Identities = 159/194 (81%), Positives = 173/194 (89%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           LIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+
Sbjct: 410 LIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGV 469

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
           PSGLYNTQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG DNTGMT + I R+  FI
Sbjct: 470 PSGLYNTQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILGGDNTGMTNLAIDRIDKFI 529

Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
           TFLE YAL RYNMVL  TK +LT+LRSKI +LGY+CNYGSPKRDI KLVAQLC+PENGLK
Sbjct: 530 TFLETYALARYNMVLPKTKCILTSLRSKIVTLGYECNYGSPKRDIHKLVAQLCFPENGLK 589

Query: 542 PHTMAARAIGIAYA 583
            HTM+ARA GIAYA
Sbjct: 590 AHTMSARATGIAYA 603

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  284 bits (727), Expect = 3e-75
 Identities = 134/194 (69%), Positives = 156/194 (80%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+  DG+AY R+  G+
Sbjct: 399 LIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGV 458

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
           PSGL NTQYLDSF NLFLIID + EFGFT +EI   +  ++GDDN+G T + I R+  FI
Sbjct: 459 PSGLLNTQYLDSFCNLFLIIDGLFEFGFTQAEILSIVFFIMGDDNSGFTMMDIERLTQFI 518

Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
            F E YAL+RYNMVLS TKSV+TTLRS+IE+L YQCN G+PKR + KL+AQLCYPE+G K
Sbjct: 519 EFFESYALKRYNMVLSKTKSVITTLRSRIETLSYQCNGGNPKRPLGKLIAQLCYPEHGPK 578

Query: 542 PHTMAARAIGIAYA 583
              M+ARAIGIAYA
Sbjct: 579 DKYMSARAIGIAYA 592

[3][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  265 bits (678), Expect = 1e-69
 Identities = 120/194 (61%), Positives = 153/194 (78%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           +IVI+HGYQPTY+YP+YPDL   K++ RMDN+L FLHTWYNN+ F+  DG+AY RTC G+
Sbjct: 394 MIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGV 453

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
           PSGL NTQYLDSF NLFLI D ++EFG +++EI +  LLV+GDDN+  T   I ++ +F+
Sbjct: 454 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFTLWSIAKLEEFL 513

Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
           +F E YAL R+ MVLS TKSV+T +R KIE+L YQCNYG+PKR + KLVAQLCYPE G +
Sbjct: 514 SFFESYALRRFGMVLSKTKSVITVIRGKIETLSYQCNYGAPKRPLAKLVAQLCYPERGPR 573

Query: 542 PHTMAARAIGIAYA 583
               +ARAIG+AYA
Sbjct: 574 AKYTSARAIGMAYA 587

[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  248 bits (634), Expect = 2e-64
 Identities = 117/194 (60%), Positives = 146/194 (75%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           LI+IN GYQPT +Y  YPDL    ++ RM NLLHFLHTWYNNM ++  DG+AY R  CG+
Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGV 454

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
           PSGL+NTQYLDSFGNL+LIID MLEFG +  EI   +LL++GDDN+G T   + R+  F+
Sbjct: 455 PSGLFNTQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMGDDNSGFTHWELLRLTHFL 514

Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
            F E YAL RYNMVLS +KSV+T  R++IE+L Y  N+G P R + KLVAQLCYPE+G+ 
Sbjct: 515 DFFENYALVRYNMVLSKSKSVITRFRNRIETLSYSANFGMPTRPLGKLVAQLCYPEHGVI 574

Query: 542 PHTMAARAIGIAYA 583
              M++RAIGIAYA
Sbjct: 575 DKYMSSRAIGIAYA 588

[5][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  248 bits (632), Expect = 3e-64
 Identities = 112/194 (57%), Positives = 149/194 (76%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           L+V+NHGY PTYEYP+YPDL  + +  R+ NL+ FL TWY NM F+  DG++Y R   G+
Sbjct: 391 LLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGV 450

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
           PSG+ NTQ+LDSFGNLFL+ID ++EFG T++EI+  +L ++GDDN+  TT  I  +  F+
Sbjct: 451 PSGMLNTQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMGDDNSAFTTWSITHLEQFV 510

Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
           +F E YAL RY MVLS TKS++TTLR KIE+L YQCN+G P+R I KLVAQLC+PE G +
Sbjct: 511 SFFETYALSRYGMVLSKTKSIITTLRHKIETLSYQCNFGHPRRPIGKLVAQLCFPERGPR 570

Query: 542 PHTMAARAIGIAYA 583
           P  M+ARA+G+A+A
Sbjct: 571 PKYMSARAVGMAWA 584

[6][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
            virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  230 bits (587), Expect = 5e-59
 Identities = 108/194 (55%), Positives = 150/194 (77%)
 Frame = +2

Query: 2    LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
            L++I+HGY PT EY     ++   ++ R  NL++F  TWY NM FL  DG+A+RR   G+
Sbjct: 422  LLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGV 480

Query: 182  PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
            PSG+  TQ+LDSFGNL+LIID++LEFG T  +I+  +L ++GDDN+  T   I +++DFI
Sbjct: 481  PSGMLLTQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMGDDNSIFTNWTIDKLHDFI 540

Query: 362  TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
            +F+E+Y L+R+NM LS TKSV+TTLRSKIE+L Y+CN+G P+RD+EKL+AQL YPE+GLK
Sbjct: 541  SFMERYCLKRWNMHLSKTKSVITTLRSKIETLSYRCNFGKPRRDVEKLIAQLVYPEHGLK 600

Query: 542  PHTMAARAIGIAYA 583
            P  M++RAIG+AYA
Sbjct: 601  PQFMSSRAIGLAYA 614

[7][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  174 bits (442), Expect = 3e-42
 Identities = 83/182 (45%), Positives = 120/182 (65%)
 Frame = +2

Query: 38  EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 217
           EY T P+        ++ NL+ FL  WY +M F+ PDG+AYRRT  G+PSG+  TQ++DS
Sbjct: 390 EYQTPPEATVFA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDS 447

Query: 218 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYN 397
           F NL +++D ++EFGFT+ EI++ ++ ++GDDN   T   + ++ +F  +  KY L+R+ 
Sbjct: 448 FVNLTILLDGLIEFGFTDEEIKQLLVFIMGDDNVIFTPWTLLKLIEFFDWFAKYTLDRFG 507

Query: 398 MVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIA 577
           MV++ +KS +T++R KIE LGY  NYG P R I KLV QL YPE  +    M  RAIG A
Sbjct: 508 MVINISKSAVTSIRRKIEVLGYTNNYGFPTRSISKLVGQLAYPERHVTDADMCMRAIGFA 567

Query: 578 YA 583
           YA
Sbjct: 568 YA 569

[8][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  169 bits (427), Expect = 2e-40
 Identities = 77/167 (46%), Positives = 113/167 (67%)
 Frame = +2

Query: 80  HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259
           ++++NLL F++TW+  M ++ PDG+AYRRT  G+PSG+  TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465

Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439
           GF  S+I+  ++L++GDDN       + +++ F  FL  YA +R+NM ++  KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525

Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580
            KIE LGY  NYG P R + KL+ QL YPE  +    M  RAIG A+
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAW 572

[9][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  166 bits (421), Expect = 9e-40
 Identities = 76/167 (45%), Positives = 112/167 (67%)
 Frame = +2

Query: 80  HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259
           ++++NLL F++TW+  M ++ PDG+AY RT  G+PSG+  TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465

Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439
           GF  S+I+  ++L++GDDN       + +++ F  FL  YA +R+NM ++  KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525

Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580
            KIE LGY  NYG P R + KL+ QL YPE  +    M  RAIG A+
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAW 572

[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  165 bits (418), Expect = 2e-39
 Identities = 77/167 (46%), Positives = 111/167 (66%)
 Frame = +2

Query: 80  HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259
           ++++NLL F++TW+  M ++ PDG+AYRRT  G+PSG+  TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465

Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439
           GF  S+I   ++L++GDDN       + +++ F  FL  YA +R+NM ++  KS+ TTLR
Sbjct: 466 GFHESDITSALILLMGDDNVVFAPDKLSQLHSFFLFLPGYAKKRWNMTVNVDKSIFTTLR 525

Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580
            KIE LGY  NYG P R + KL+ QL YPE       M  RAIG A+
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHGFDSDMCMRAIGFAW 572

[11][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  157 bits (398), Expect = 4e-37
 Identities = 67/109 (61%), Positives = 88/109 (80%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ ++  DG+AY RTC G+
Sbjct: 394 MIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGV 453

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 328
           PSGL NTQYLDSF NLFLI D ++EFG +++EI +  LLV+GDDN+  T
Sbjct: 454 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 502

[12][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  157 bits (398), Expect = 4e-37
 Identities = 67/109 (61%), Positives = 88/109 (80%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ ++  DG+AY RTC G+
Sbjct: 77  MIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGV 136

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 328
           PSGL NTQYLDSF NLFLI D ++EFG +++EI +  LLV+GDDN+  T
Sbjct: 137 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 185

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score =  155 bits (392), Expect = 2e-36
 Identities = 79/168 (47%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
 Frame = +2

Query: 92  NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 271
           N+L F+  WY  M F+ PDGY Y R   G+PSG++ TQ LDSF NLF+ +DA+LEFGF+ 
Sbjct: 442 NILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSI 501

Query: 272 SEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIE 451
            +I+ F L + GDDN       + R++DF  +  +YAL+R++M++S  KS +T LR+KIE
Sbjct: 502 DQIKCFRLFIQGDDNLVFYLGDLTRIFDFYEWYPEYALDRWHMIVSPDKSWITRLRTKIE 561

Query: 452 SLGYQCNYGSPKRDIEKLVAQLCYPENGL----KPHTMAARAIGIAYA 583
            LGY    G P RD+ KL+A L YPE  +    +   + +RAIGIAYA
Sbjct: 562 VLGYTNANGMPHRDVSKLIATLAYPERTILDKNRYPILMSRAIGIAYA 609

[14][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score =  101 bits (252), Expect = 4e-20
 Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
 Frame = +2

Query: 17  HGYQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 190
           +GY PT+ YP  T  D DE  +  R++NL +++      +  L+PDG   R T  GI SG
Sbjct: 355 NGYHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSG 414

Query: 191 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-FITF 367
              TQ LDS  N+ +I   +   GF   ++++ ++ V GDD+  M       + + F+T 
Sbjct: 415 YMQTQILDSLYNMVMIFTMVSRLGF---DLDKVVIKVQGDDSIFMLLCCFILIANWFLTM 471

Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 547
            + YAL  +  VLS  KS +       E L Y+   G P RD   L+AQL +PE      
Sbjct: 472 FKHYALYYFGAVLSDKKSEIRDSLEHAEVLKYRNRNGIPYRDPIALLAQLRHPERSDTLQ 531

Query: 548 TMAARAIGIAYA 583
            + ARAIGIAYA
Sbjct: 532 ALMARAIGIAYA 543

[15][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
           cryptic virus 1 RepID=B7ZGY8_9VIRU
          Length = 587

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
 Frame = +2

Query: 14  NHGYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 190
           +HGYQPT +Y  T  D D      R+ NL  ++          LPDG  +RR+  G+PSG
Sbjct: 315 SHGYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSG 368

Query: 191 LYNTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-- 355
           L+ TQ+LDS  N   +F I+DAM  F  T+      I+ VLGDD+  +T + +   YD  
Sbjct: 369 LFITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS--LTRLRLLIPYDQH 421

Query: 356 --FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE 529
             F    +  A   ++ VLS  KS +    + ++ LGY+ N G P RD E L+  L YP+
Sbjct: 422 EAFTIRFKHLAQYYFDAVLSDKKSRIHNTLNGVKCLGYRNNNGLPVRDRESLLTALLYPK 481

Query: 530 NGLKP--HTMAARAIGIAYA 583
              +P    + AR IGIAYA
Sbjct: 482 -ARRPTFEQLKARCIGIAYA 500

[16][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
           1 RepID=Q52UL1_9VIRU
          Length = 573

 Score = 89.0 bits (219), Expect = 3e-16
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
 Frame = +2

Query: 23  YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202
           Y PT  YPT     +     R+ NL +++ T Y +       G  YRR   G+PSG++ T
Sbjct: 294 YCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCT 348

Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEK 376
           Q+ DSF N  +++  +   GF  +  +R+ L VLGDD     +  IPI +  DF+     
Sbjct: 349 QFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDDVIFGILKHIPISKWADFLQDFST 406

Query: 377 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TM 553
            A  R+N  L++ K   ++     + L Y    G PKRD  +L+AQL +P++    +  +
Sbjct: 407 EARRRFNSKLNSKKCGASSGIHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRL 466

Query: 554 AARAIGIAYA 583
            ARAIGI YA
Sbjct: 467 MARAIGIYYA 476

[17][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
           insulare T-type partitivirus RepID=C1KDH6_9VIRU
          Length = 585

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
 Frame = +2

Query: 47  TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 226
           TYPD     +  RM+ L ++       M F+LPD   Y R    IPSGL+ TQ+LDS  N
Sbjct: 323 TYPDSKTDPI--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYN 380

Query: 227 LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNM 400
           L +I   +   GF   +I   ++LV GDD+       +P  +   F    E+ A   ++ 
Sbjct: 381 LIMIYTILSAMGF---DITNLMILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDH 437

Query: 401 VLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK---PHTMAARAIG 571
           +    K+ +T   +++E LGY  N G P RD+ KLVAQL +P N  K      + A+  G
Sbjct: 438 IARPEKTHVTNSPNEVEVLGYTNNNGYPSRDMTKLVAQLYHPRNVDKTSWKSLLMAKVCG 497

Query: 572 IAYA 583
            AYA
Sbjct: 498 FAYA 501

[18][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
           mycovirus RepID=Q8B0U3_9VIRU
          Length = 598

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
 Frame = +2

Query: 17  HGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 196
           +GY PT +Y        H     ++ L +++      M   LPDG  Y+R   GIPSGL+
Sbjct: 320 NGYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLF 374

Query: 197 NTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITFL 370
            TQ+LDSF N+ +I+  +   GF  S +    + V GDD+    +  +P     +F    
Sbjct: 375 TTQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDSLIRLIFHVPANMHAEFKRTF 431

Query: 371 EKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT 550
           E YA   ++ V    K+ +T   ++I +LGY    G P RD  KL+AQL +P +     +
Sbjct: 432 EVYAAYYFDSVARPEKTHITNNPNEINALGYDYPNGYPHRDWRKLLAQLLHPRSTAPRFS 491

Query: 551 -MAARAIGIAYA 583
            + AR  GI YA
Sbjct: 492 LLKARTCGIQYA 503

[19][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
 Frame = +2

Query: 2   LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
           +     GY PT  YP  PD +      R++NL +++      +  +LPDG   +    GI
Sbjct: 311 MFTFTEGYHPTISYPNAPDTNPD----RLENLWNWMTDAILTVPLMLPDGQLLQFNHSGI 366

Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY-DF 358
            SG + TQ LDS  N  +I   +   GF   ++++F + V GDD+  ++      +   F
Sbjct: 367 YSGYFQTQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQGDDSLMISPYNYTLLEPSF 423

Query: 359 ITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGL 538
           +     YA E +   L+  KS +       E L Y+ +   P+R+  +L+A L +PE   
Sbjct: 424 LKTFGDYAKEYFGSTLNLKKSEILPSLDGAEVLKYRNHGTMPQREEIQLLAMLRHPERTA 483

Query: 539 KPHTMAARAIGIAYA 583
              ++ AR IG+ YA
Sbjct: 484 SLPSLMARCIGVTYA 498

[20][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
           RepID=Q5XM56_9VIRU
          Length = 573

 Score = 82.0 bits (201), Expect = 3e-14
 Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
 Frame = +2

Query: 83  RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 262
           R+ NL +++ T Y +       G  YRR   G+PSG++ TQ+ DSF N  +++  +   G
Sbjct: 309 RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALG 368

Query: 263 FTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTL 436
           F  +  +R+ L VLGD      +  IPI +  DF+      A  R+N  L++ K   ++ 
Sbjct: 369 FRIT--DRYFLKVLGDVVIFGILKHIPISKSADFLQDFSTEARRRFNSKLNSKKCGASSG 426

Query: 437 RSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TMAARAIGIAYA 583
               + L Y    G PKRD  +L+AQL +P++    +  + ARAIGI YA
Sbjct: 427 IHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRLMARAIGIYYA 476

[21][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 81.3 bits (199), Expect = 5e-14
 Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178
           +  + GY PT+  PT+P  D  K   R++ L  +L T  N      +LPDG  YRR   G
Sbjct: 338 LTFDEGYVPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394

Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMY 352
           IPSGL+ TQ LDS+ N  ++   +   GF   + +  I+ V GDD+       +P  +  
Sbjct: 395 IPSGLFITQLLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQ 451

Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529
           + +  L + A+  +N V++  KS      +  E L Y+ + G P RD   ++AQ  + + 
Sbjct: 452 NLMDNLVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKA 511

Query: 530 NGLKPHTMAARAIGIAYA 583
               P    A+AIG AYA
Sbjct: 512 RDPTPEITMAQAIGFAYA 529

[22][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 80.9 bits (198), Expect = 7e-14
 Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178
           +  + GY PT+  P +P  +  K   R++ L  +L T  N      +LPDG  YRR   G
Sbjct: 338 LTFDEGYVPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394

Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMY 352
           IPSGL+ TQ LDS+ N  ++   +   GF   + ++ I+ V GDD+    T  IP     
Sbjct: 395 IPSGLFITQLLDSWYNYTMLATILSALGF---DPKQCIIKVQGDDSIIRLTVLIPQETHE 451

Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529
            F+  L   A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + + 
Sbjct: 452 RFMAHLTHLATYYFNAIVNVKKSEVANTLNGREVLSYRNHNGFPHRDEINMLAQFYHTKA 511

Query: 530 NGLKPHTMAARAIGIAYA 583
               P    A+AIG AYA
Sbjct: 512 RDTTPEITMAQAIGFAYA 529

[23][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 3/196 (1%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 184
           +  + GY PT+  PT+P  D  K        L  L   +     +LPDG  YRR   GIP
Sbjct: 282 LTFDEGYVPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIP 340

Query: 185 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDF 358
           SGL+ TQ LDS+ N  ++   +   GF   + +  I+ V GDD+       +P  +  + 
Sbjct: 341 SGLFITQSLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNL 397

Query: 359 ITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NG 535
           +  L + A+  +N V++  KS      +  E L Y+ + G P RD   ++AQ  + +   
Sbjct: 398 MDNLVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARD 457

Query: 536 LKPHTMAARAIGIAYA 583
             P    A+AIG AYA
Sbjct: 458 PTPEITMAQAIGFAYA 473

[24][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 80.1 bits (196), Expect = 1e-13
 Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178
           +    GY PT+  PT+P   +  +  R++ L  +L T  N      +LPDG  YRR   G
Sbjct: 338 LTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394

Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMY 352
           IPSGL+ TQ LDS+ N  ++   +    F   +    I+ V GDD+     T IP+ +  
Sbjct: 395 IPSGLFITQLLDSWYNYTMLATILSALHF---DPLHCIIKVQGDDSILRLTTLIPVDQHT 451

Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529
           +F+  + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + + 
Sbjct: 452 NFMDHIVRLADTYFNSIVNVKKSEVRNSLNGCEVLSYRNHNGLPHRDEITMLAQFYHTKA 511

Query: 530 NGLKPHTMAARAIGIAYA 583
               P    A+AIG AYA
Sbjct: 512 RDPTPEITMAQAIGFAYA 529

[25][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-2 RepID=Q6BE42_9VIRU
          Length = 538

 Score = 78.6 bits (192), Expect = 3e-13
 Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
 Frame = +2

Query: 44  PTYPDLDE------HKLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 184
           PT P LDE      H  Y        R+ NL  ++   Y NM  +   G  ++R+  G+P
Sbjct: 252 PTLPVLDEETGTQLHPPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMP 311

Query: 185 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER-FILLVLGDDNTG--MTTIPICRMYD 355
           SG++ TQ+ DSF N  +I+  +L  G+   E+    ++ ++GDD     + +IPI    +
Sbjct: 312 SGIFCTQFYDSFYNAVIIVTCLLALGY---EVRHDHLIKLMGDDALFGLLESIPIEHWSE 368

Query: 356 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 535
           F+  L   AL R+N  LS TK   T        L Y    G P R  E ++A L +P++ 
Sbjct: 369 FLDALAAEALFRFNAKLSATKCGYTRTIQGATVLSYTNWNGWPVRSAEDVLAHLLHPKS- 427

Query: 536 LKPHT--MAARAIGIAYA 583
           LK     + AR+IG+ YA
Sbjct: 428 LKDSAPRLMARSIGLYYA 445

[26][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
           disease-associated mycovirus RepID=Q65A75_9VIRU
          Length = 621

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
 Frame = +2

Query: 14  NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193
           ++GY PT +YP        +   R+  L  +    + +   +LP+G+ Y R   GIPSGL
Sbjct: 343 DNGYLPTKDYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGL 402

Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 367
           + TQ +DS+ N  ++   +   GF   +    I+ V GDD+    +  IP      F+T 
Sbjct: 403 FITQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTK 459

Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 544
           +++ A   +  V+S  KS +    +  E L Y+  +G P RD   ++AQL + +     P
Sbjct: 460 VQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSP 519

Query: 545 HTMAARAIGIAYA 583
               A++IG AYA
Sbjct: 520 EITMAQSIGFAYA 532

[27][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
           +    GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR  
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392

Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
            GIPSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449

Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
               ++ + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + 
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509

Query: 527 E-NGLKPHTMAARAIGIAYA 583
           +     P    A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529

[28][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
 Frame = +2

Query: 14  NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193
           N+GY PT +YP   D   H    ++ NL  ++ T        L DG  ++RT  GI SG 
Sbjct: 312 NNGYIPTVDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQ 366

Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITF 367
           + TQ++DS  N  +I+  +   GF     E   + +LGDD+      +IP      F+  
Sbjct: 367 FTTQFMDSIYNGLMILTILSRMGFVID--ETLPIKLLGDDSVTRLAVSIPASMHESFLIE 424

Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKP- 544
            ++ A   ++  ++  KS ++     +  L Y  N G P R    L+  L YP++  +P 
Sbjct: 425 FQRLADYYFSHTINVKKSKISNTPHNVSVLSYANNNGLPVRSRTSLLCALLYPKS-RRPT 483

Query: 545 -HTMAARAIGIAYA 583
              + ARAIG+ YA
Sbjct: 484 WEHLKARAIGVYYA 497

[29][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
           +    GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR  
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392

Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
            GIPSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449

Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
               ++ + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + 
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509

Query: 527 E-NGLKPHTMAARAIGIAYA 583
           +     P    A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529

[30][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
           +    GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR  
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392

Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
            GIPSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449

Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
               ++ + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + 
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509

Query: 527 E-NGLKPHTMAARAIGIAYA 583
           +     P    A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529

[31][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
           +    GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR  
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392

Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
            GIPSGL+ TQ LDS+ N  ++   +   GF  S     I+ V GDD+       +P  R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449

Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
               ++ + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + 
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVEKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509

Query: 527 E-NGLKPHTMAARAIGIAYA 583
           +     P    A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529

[32][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
           associated partitivirus RepID=Q65A70_9VIRU
          Length = 621

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
 Frame = +2

Query: 14  NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193
           ++GY PT +YP            R+  L  +    + +   +LP+G+ Y R   GIPSGL
Sbjct: 343 DNGYLPTKDYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGL 402

Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 367
           + TQ +DS+ N  ++   +   GF   +    I+ V GDD+    +  IP      F+T 
Sbjct: 403 FITQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTK 459

Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 544
           +++ A   +  V+S  KS +    +  E L Y+  +G P RD   ++AQL + +     P
Sbjct: 460 VQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSP 519

Query: 545 HTMAARAIGIAYA 583
               A++IG AYA
Sbjct: 520 EITMAQSIGFAYA 532

[33][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
           Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
          Length = 367

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
 Frame = +2

Query: 17  HGYQPTYEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPS 187
           +GY PT +YP   T+PD        ++  L  +    + +   +LP+G+ Y+R   GIPS
Sbjct: 113 NGYTPTKDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPS 164

Query: 188 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFI 361
           GL+ TQ +DS+ N  ++   +    + + + +  I+ V GDD+       IP     +F+
Sbjct: 165 GLFITQLMDSWYNYVMLCSIL---HYMDIDPKTCIIKVQGDDSIIRLAILIPKDEHDNFL 221

Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 538
             ++  A   +  ++S  KS L       E L Y+   G P RD+ K++AQ  + +    
Sbjct: 222 ATMQTVADHLFGAIISMDKSELRNSIENCEVLSYRHFMGLPYRDLLKMLAQFYHTKARDP 281

Query: 539 KPHTMAARAIGIAYA 583
            P    A+A+G AYA
Sbjct: 282 TPEITMAQAVGFAYA 296

[34][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 74.3 bits (181), Expect = 6e-12
 Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
 Frame = +2

Query: 5   IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
           +    GY PT+  P +P  ++ K      + L  L  W     F    +LPDG  YRR  
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392

Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
            GIPSGL+ TQ  DS+ N  ++   +   GF  S     I+ V GDD+       +P  R
Sbjct: 393 AGIPSGLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449

Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
               ++ + + A   +N +++  KS +    +  E L Y+ + G P RD   ++AQ  + 
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509

Query: 527 E-NGLKPHTMAARAIGIAYA 583
           +     P    A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529

[35][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
           partitivirus S RepID=C7ENF4_9VIRU
          Length = 580

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
 Frame = +2

Query: 23  YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202
           Y+PT  Y      + H+   R++NL  ++     +   L PDG  Y+ T  GI SG   T
Sbjct: 305 YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQT 361

Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY--DFITFLEK 376
           Q LDSF N+ +++  +   G  N E   F + V GDD+         +M+   ++  L  
Sbjct: 362 QLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDSLISIVERRFQMFGISYLDTLAD 420

Query: 377 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 556
            A   +N  LS  KS ++        LGY  +YG P R  + L++ L +PE   +    A
Sbjct: 421 LASYYFNAKLSVKKSFISDTPQGQYVLGYFNHYGIPYRLDDDLLSHLVFPERPQRLEETA 480

Query: 557 ARAIGIAYA 583
           A  +GIA A
Sbjct: 481 ASCVGIAMA 489

[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
           isometric virus RepID=B7X9J3_9VIRU
          Length = 587

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
 Frame = +2

Query: 23  YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202
           Y PT  YP  P  DE     R++NL  ++          L  G   +    GI SG   T
Sbjct: 310 YMPTSFYPNAPT-DES----RLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQT 364

Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-----FITF 367
           Q LDSF N+ +I+  +   G   +  + FI            T P   MY      F+  
Sbjct: 365 QLLDSFVNMIMILTCLSRAGVNINSKDFFIS---SRGRFTYRTFPEM-MYQLHGMKFLDM 420

Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 547
           +   A+  +N  L+  KS +    + ++ LGY  +YG+P+R  + L++ L +PE      
Sbjct: 421 IANNAMYYFNAKLNVDKSEINWNTNGMKVLGYPNDYGTPRRTDQDLLSHLFFPERIYSLP 480

Query: 548 TMAARAIGIAYA 583
           ++A+  IGIAYA
Sbjct: 481 SLASTCIGIAYA 492

[37][TOP]
>UniRef100_Q58HI2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Helicobasidium
           purpureum partitivirus RepID=Q58HI2_9VIRU
          Length = 162

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
 Frame = +2

Query: 44  PTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 217
           PT+P  D  K   R++ L  +L T  N      +LPDG  YRR   GIPSGL+ TQ LDS
Sbjct: 3   PTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDS 59

Query: 218 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALER 391
           + N  ++   +   GF   + +  I+ V GDD+       +P  +  + +  L + A+  
Sbjct: 60  WYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNY 116

Query: 392 YNMVLSTTKSVLTTLRSKIESLGYQ-CNYGSPKRDIEKLVAQ 514
           +N V++  KS      +  E L Y+  + GSP RD   ++AQ
Sbjct: 117 FNAVVNVKKSEFGNSLNGREVLSYRNLHMGSPSRDEIMMLAQ 158

[38][TOP]
>UniRef100_Q4G3H2 Putative dsRNA-dependent RNA polymerase n=1 Tax=Penicillium
           stoloniferum virus F RepID=Q4G3H2_9VIRU
          Length = 538

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
 Frame = +2

Query: 104 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 283
           FL T++     +LPDG  Y++   GIPSG + TQ + S  N +L +  +  +   N+   
Sbjct: 313 FLKTYFKKTKIMLPDGSLYKKFH-GIPSGSFFTQIIGSIVN-YLAVKTLDNYFSWNARRF 370

Query: 284 RFILLVLGDDNTGMTTIPICRM-YDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 460
           R    VLGDD++ +  IP  R   D +   EK A E +   L   K  +   +   + LG
Sbjct: 371 R----VLGDDSSFL--IPFGRSKVDGVEISEK-AWETFGFTLKLKKLRIANKQQDRKFLG 423

Query: 461 YQCNYGSPKRDIEKLVAQLCYPENGLK 541
           YQCN    +R   + ++ + YPE  ++
Sbjct: 424 YQCNAFRYERSTTEWLSMVLYPERDVE 450