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[1][TOP] >UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides virus China/Mar2007 RepID=A8W7G1_9VIRU Length = 723 Score = 335 bits (858), Expect = 2e-90 Identities = 159/194 (81%), Positives = 173/194 (89%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 LIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+ Sbjct: 410 LIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGV 469 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361 PSGLYNTQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG DNTGMT + I R+ FI Sbjct: 470 PSGLYNTQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILGGDNTGMTNLAIDRIDKFI 529 Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541 TFLE YAL RYNMVL TK +LT+LRSKI +LGY+CNYGSPKRDI KLVAQLC+PENGLK Sbjct: 530 TFLETYALARYNMVLPKTKCILTSLRSKIVTLGYECNYGSPKRDIHKLVAQLCFPENGLK 589 Query: 542 PHTMAARAIGIAYA 583 HTM+ARA GIAYA Sbjct: 590 AHTMSARATGIAYA 603 [2][TOP] >UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix partitivirus 1-W8 RepID=Q50LH7_9VIRU Length = 709 Score = 284 bits (727), Expect = 3e-75 Identities = 134/194 (69%), Positives = 156/194 (80%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ G+ Sbjct: 399 LIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGV 458 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361 PSGL NTQYLDSF NLFLIID + EFGFT +EI + ++GDDN+G T + I R+ FI Sbjct: 459 PSGLLNTQYLDSFCNLFLIIDGLFEFGFTQAEILSIVFFIMGDDNSGFTMMDIERLTQFI 518 Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541 F E YAL+RYNMVLS TKSV+TTLRS+IE+L YQCN G+PKR + KL+AQLCYPE+G K Sbjct: 519 EFFESYALKRYNMVLSKTKSVITTLRSRIETLSYQCNGGNPKRPLGKLIAQLCYPEHGPK 578 Query: 542 PHTMAARAIGIAYA 583 M+ARAIGIAYA Sbjct: 579 DKYMSARAIGIAYA 592 [3][TOP] >UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1 RepID=Q5GHF1_9VIRU Length = 706 Score = 265 bits (678), Expect = 1e-69 Identities = 120/194 (61%), Positives = 153/194 (78%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 +IVI+HGYQPTY+YP+YPDL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC G+ Sbjct: 394 MIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGV 453 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361 PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T I ++ +F+ Sbjct: 454 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFTLWSIAKLEEFL 513 Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541 +F E YAL R+ MVLS TKSV+T +R KIE+L YQCNYG+PKR + KLVAQLCYPE G + Sbjct: 514 SFFESYALRRFGMVLSKTKSVITVIRGKIETLSYQCNYGAPKRPLAKLVAQLCYPERGPR 573 Query: 542 PHTMAARAIGIAYA 583 +ARAIG+AYA Sbjct: 574 AKYTSARAIGMAYA 587 [4][TOP] >UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-1 RepID=Q6BE43_9VIRU Length = 706 Score = 248 bits (634), Expect = 2e-64 Identities = 117/194 (60%), Positives = 146/194 (75%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 LI+IN GYQPT +Y YPDL ++ RM NLLHFLHTWYNNM ++ DG+AY R CG+ Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGV 454 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361 PSGL+NTQYLDSFGNL+LIID MLEFG + EI +LL++GDDN+G T + R+ F+ Sbjct: 455 PSGLFNTQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMGDDNSGFTHWELLRLTHFL 514 Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541 F E YAL RYNMVLS +KSV+T R++IE+L Y N+G P R + KLVAQLCYPE+G+ Sbjct: 515 DFFENYALVRYNMVLSKSKSVITRFRNRIETLSYSANFGMPTRPLGKLVAQLCYPEHGVI 574 Query: 542 PHTMAARAIGIAYA 583 M++RAIGIAYA Sbjct: 575 DKYMSSRAIGIAYA 588 [5][TOP] >UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1 RepID=Q9YX75_9VIRU Length = 673 Score = 248 bits (632), Expect = 3e-64 Identities = 112/194 (57%), Positives = 149/194 (76%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 L+V+NHGY PTYEYP+YPDL + + R+ NL+ FL TWY NM F+ DG++Y R G+ Sbjct: 391 LLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGV 450 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361 PSG+ NTQ+LDSFGNLFL+ID ++EFG T++EI+ +L ++GDDN+ TT I + F+ Sbjct: 451 PSGMLNTQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMGDDNSAFTTWSITHLEQFV 510 Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541 +F E YAL RY MVLS TKS++TTLR KIE+L YQCN+G P+R I KLVAQLC+PE G + Sbjct: 511 SFFETYALSRYGMVLSKTKSIITTLRHKIETLSYQCNFGHPRRPIGKLVAQLCFPERGPR 570 Query: 542 PHTMAARAIGIAYA 583 P M+ARA+G+A+A Sbjct: 571 PKYMSARAVGMAWA 584 [6][TOP] >UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani virus 717 RepID=Q9Q9X2_9VIRU Length = 730 Score = 230 bits (587), Expect = 5e-59 Identities = 108/194 (55%), Positives = 150/194 (77%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 L++I+HGY PT EY ++ ++ R NL++F TWY NM FL DG+A+RR G+ Sbjct: 422 LLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGV 480 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361 PSG+ TQ+LDSFGNL+LIID++LEFG T +I+ +L ++GDDN+ T I +++DFI Sbjct: 481 PSGMLLTQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMGDDNSIFTNWTIDKLHDFI 540 Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541 +F+E+Y L+R+NM LS TKSV+TTLRSKIE+L Y+CN+G P+RD+EKL+AQL YPE+GLK Sbjct: 541 SFMERYCLKRWNMHLSKTKSVITTLRSKIETLSYRCNFGKPRRDVEKLIAQLVYPEHGLK 600 Query: 542 PHTMAARAIGIAYA 583 P M++RAIG+AYA Sbjct: 601 PQFMSSRAIGLAYA 614 [7][TOP] >UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella hypoxylon virus RepID=Q85055_AHV Length = 665 Score = 174 bits (442), Expect = 3e-42 Identities = 83/182 (45%), Positives = 120/182 (65%) Frame = +2 Query: 38 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 217 EY T P+ ++ NL+ FL WY +M F+ PDG+AYRRT G+PSG+ TQ++DS Sbjct: 390 EYQTPPEATVFA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDS 447 Query: 218 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYN 397 F NL +++D ++EFGFT+ EI++ ++ ++GDDN T + ++ +F + KY L+R+ Sbjct: 448 FVNLTILLDGLIEFGFTDEEIKQLLVFIMGDDNVIFTPWTLLKLIEFFDWFAKYTLDRFG 507 Query: 398 MVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIA 577 MV++ +KS +T++R KIE LGY NYG P R I KLV QL YPE + M RAIG A Sbjct: 508 MVINISKSAVTSIRRKIEVLGYTNNYGFPTRSISKLVGQLAYPERHVTDADMCMRAIGFA 567 Query: 578 YA 583 YA Sbjct: 568 YA 569 [8][TOP] >UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6EM35_9VIRU Length = 663 Score = 169 bits (427), Expect = 2e-40 Identities = 77/167 (46%), Positives = 113/167 (67%) Frame = +2 Query: 80 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259 ++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465 Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439 GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525 Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580 KIE LGY NYG P R + KL+ QL YPE + M RAIG A+ Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAW 572 [9][TOP] >UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6X9T6_9VIRU Length = 663 Score = 166 bits (421), Expect = 9e-40 Identities = 76/167 (45%), Positives = 112/167 (67%) Frame = +2 Query: 80 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259 ++++NLL F++TW+ M ++ PDG+AY RT G+PSG+ TQ +DSF NL ++ID++ EF Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465 Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439 GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525 Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580 KIE LGY NYG P R + KL+ QL YPE + M RAIG A+ Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAW 572 [10][TOP] >UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus 1 RepID=Q5DM90_9VIRU Length = 663 Score = 165 bits (418), Expect = 2e-39 Identities = 77/167 (46%), Positives = 111/167 (66%) Frame = +2 Query: 80 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259 ++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465 Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439 GF S+I ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR Sbjct: 466 GFHESDITSALILLMGDDNVVFAPDKLSQLHSFFLFLPGYAKKRWNMTVNVDKSIFTTLR 525 Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580 KIE LGY NYG P R + KL+ QL YPE M RAIG A+ Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHGFDSDMCMRAIGFAW 572 [11][TOP] >UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=D0EIN9_9VIRU Length = 502 Score = 157 bits (398), Expect = 4e-37 Identities = 67/109 (61%), Positives = 88/109 (80%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+ Sbjct: 394 MIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGV 453 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 328 PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T Sbjct: 454 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 502 [12][TOP] >UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=B2L075_9VIRU Length = 185 Score = 157 bits (398), Expect = 4e-37 Identities = 67/109 (61%), Positives = 88/109 (80%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+ Sbjct: 77 MIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGV 136 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 328 PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T Sbjct: 137 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 185 [13][TOP] >UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion annosum P-type partitivirus RepID=Q8QY51_9VIRU Length = 734 Score = 155 bits (392), Expect = 2e-36 Identities = 79/168 (47%), Positives = 110/168 (65%), Gaps = 4/168 (2%) Frame = +2 Query: 92 NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 271 N+L F+ WY M F+ PDGY Y R G+PSG++ TQ LDSF NLF+ +DA+LEFGF+ Sbjct: 442 NILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSI 501 Query: 272 SEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIE 451 +I+ F L + GDDN + R++DF + +YAL+R++M++S KS +T LR+KIE Sbjct: 502 DQIKCFRLFIQGDDNLVFYLGDLTRIFDFYEWYPEYALDRWHMIVSPDKSWITRLRTKIE 561 Query: 452 SLGYQCNYGSPKRDIEKLVAQLCYPENGL----KPHTMAARAIGIAYA 583 LGY G P RD+ KL+A L YPE + + + +RAIGIAYA Sbjct: 562 VLGYTNANGMPHRDVSKLIATLAYPERTILDKNRYPILMSRAIGIAYA 609 [14][TOP] >UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric virus II RepID=Q7TDZ9_9VIRU Length = 610 Score = 101 bits (252), Expect = 4e-20 Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 3/192 (1%) Frame = +2 Query: 17 HGYQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 190 +GY PT+ YP T D DE + R++NL +++ + L+PDG R T GI SG Sbjct: 355 NGYHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSG 414 Query: 191 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-FITF 367 TQ LDS N+ +I + GF ++++ ++ V GDD+ M + + F+T Sbjct: 415 YMQTQILDSLYNMVMIFTMVSRLGF---DLDKVVIKVQGDDSIFMLLCCFILIANWFLTM 471 Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 547 + YAL + VLS KS + E L Y+ G P RD L+AQL +PE Sbjct: 472 FKHYALYYFGAVLSDKKSEIRDSLEHAEVLKYRNRNGIPYRDPIALLAQLRHPERSDTLQ 531 Query: 548 TMAARAIGIAYA 583 + ARAIGIAYA Sbjct: 532 ALMARAIGIAYA 543 [15][TOP] >UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum cryptic virus 1 RepID=B7ZGY8_9VIRU Length = 587 Score = 92.0 bits (227), Expect = 3e-17 Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 10/200 (5%) Frame = +2 Query: 14 NHGYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 190 +HGYQPT +Y T D D R+ NL ++ LPDG +RR+ G+PSG Sbjct: 315 SHGYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSG 368 Query: 191 LYNTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-- 355 L+ TQ+LDS N +F I+DAM F T+ I+ VLGDD+ +T + + YD Sbjct: 369 LFITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS--LTRLRLLIPYDQH 421 Query: 356 --FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE 529 F + A ++ VLS KS + + ++ LGY+ N G P RD E L+ L YP+ Sbjct: 422 EAFTIRFKHLAQYYFDAVLSDKKSRIHNTLNGVKCLGYRNNNGLPVRDRESLLTALLYPK 481 Query: 530 NGLKP--HTMAARAIGIAYA 583 +P + AR IGIAYA Sbjct: 482 -ARRPTFEQLKARCIGIAYA 500 [16][TOP] >UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus 1 RepID=Q52UL1_9VIRU Length = 573 Score = 89.0 bits (219), Expect = 3e-16 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 3/190 (1%) Frame = +2 Query: 23 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202 Y PT YPT + R+ NL +++ T Y + G YRR G+PSG++ T Sbjct: 294 YCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCT 348 Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEK 376 Q+ DSF N +++ + GF + +R+ L VLGDD + IPI + DF+ Sbjct: 349 QFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDDVIFGILKHIPISKWADFLQDFST 406 Query: 377 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TM 553 A R+N L++ K ++ + L Y G PKRD +L+AQL +P++ + + Sbjct: 407 EARRRFNSKLNSKKCGASSGIHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRL 466 Query: 554 AARAIGIAYA 583 ARAIGI YA Sbjct: 467 MARAIGIYYA 476 [17][TOP] >UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion insulare T-type partitivirus RepID=C1KDH6_9VIRU Length = 585 Score = 87.0 bits (214), Expect = 1e-15 Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 5/184 (2%) Frame = +2 Query: 47 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 226 TYPD + RM+ L ++ M F+LPD Y R IPSGL+ TQ+LDS N Sbjct: 323 TYPDSKTDPI--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYN 380 Query: 227 LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNM 400 L +I + GF +I ++LV GDD+ +P + F E+ A ++ Sbjct: 381 LIMIYTILSAMGF---DITNLMILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDH 437 Query: 401 VLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK---PHTMAARAIG 571 + K+ +T +++E LGY N G P RD+ KLVAQL +P N K + A+ G Sbjct: 438 IARPEKTHVTNSPNEVEVLGYTNNNGYPSRDMTKLVAQLYHPRNVDKTSWKSLLMAKVCG 497 Query: 572 IAYA 583 AYA Sbjct: 498 FAYA 501 [18][TOP] >UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA mycovirus RepID=Q8B0U3_9VIRU Length = 598 Score = 84.0 bits (206), Expect = 8e-15 Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 3/192 (1%) Frame = +2 Query: 17 HGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 196 +GY PT +Y H ++ L +++ M LPDG Y+R GIPSGL+ Sbjct: 320 NGYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLF 374 Query: 197 NTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITFL 370 TQ+LDSF N+ +I+ + GF S + + V GDD+ + +P +F Sbjct: 375 TTQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDSLIRLIFHVPANMHAEFKRTF 431 Query: 371 EKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT 550 E YA ++ V K+ +T ++I +LGY G P RD KL+AQL +P + + Sbjct: 432 EVYAAYYFDSVARPEKTHITNNPNEINALGYDYPNGYPHRDWRKLLAQLLHPRSTAPRFS 491 Query: 551 -MAARAIGIAYA 583 + AR GI YA Sbjct: 492 LLKARTCGIQYA 503 [19][TOP] >UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU Length = 576 Score = 82.4 bits (202), Expect = 2e-14 Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 1/195 (0%) Frame = +2 Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181 + GY PT YP PD + R++NL +++ + +LPDG + GI Sbjct: 311 MFTFTEGYHPTISYPNAPDTNPD----RLENLWNWMTDAILTVPLMLPDGQLLQFNHSGI 366 Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY-DF 358 SG + TQ LDS N +I + GF ++++F + V GDD+ ++ + F Sbjct: 367 YSGYFQTQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQGDDSLMISPYNYTLLEPSF 423 Query: 359 ITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGL 538 + YA E + L+ KS + E L Y+ + P+R+ +L+A L +PE Sbjct: 424 LKTFGDYAKEYFGSTLNLKKSEILPSLDGAEVLKYRNHGTMPQREEIQLLAMLRHPERTA 483 Query: 539 KPHTMAARAIGIAYA 583 ++ AR IG+ YA Sbjct: 484 SLPSLMARCIGVTYA 498 [20][TOP] >UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004 RepID=Q5XM56_9VIRU Length = 573 Score = 82.0 bits (201), Expect = 3e-14 Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 3/170 (1%) Frame = +2 Query: 83 RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 262 R+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + G Sbjct: 309 RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALG 368 Query: 263 FTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTL 436 F + +R+ L VLGD + IPI + DF+ A R+N L++ K ++ Sbjct: 369 FRIT--DRYFLKVLGDVVIFGILKHIPISKSADFLQDFSTEARRRFNSKLNSKKCGASSG 426 Query: 437 RSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TMAARAIGIAYA 583 + L Y G PKRD +L+AQL +P++ + + ARAIGI YA Sbjct: 427 IHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRLMARAIGIYYA 476 [21][TOP] >UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=B2CGP3_9VIRU Length = 616 Score = 81.3 bits (199), Expect = 5e-14 Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 5/198 (2%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178 + + GY PT+ PT+P D K R++ L +L T N +LPDG YRR G Sbjct: 338 LTFDEGYVPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394 Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMY 352 IPSGL+ TQ LDS+ N ++ + GF + + I+ V GDD+ +P + Sbjct: 395 IPSGLFITQLLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQ 451 Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529 + + L + A+ +N V++ KS + E L Y+ + G P RD ++AQ + + Sbjct: 452 NLMDNLVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKA 511 Query: 530 NGLKPHTMAARAIGIAYA 583 P A+AIG AYA Sbjct: 512 RDPTPEITMAQAIGFAYA 529 [22][TOP] >UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus RepID=B8YNW9_9VIRU Length = 616 Score = 80.9 bits (198), Expect = 7e-14 Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 5/198 (2%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178 + + GY PT+ P +P + K R++ L +L T N +LPDG YRR G Sbjct: 338 LTFDEGYVPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394 Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMY 352 IPSGL+ TQ LDS+ N ++ + GF + ++ I+ V GDD+ T IP Sbjct: 395 IPSGLFITQLLDSWYNYTMLATILSALGF---DPKQCIIKVQGDDSIIRLTVLIPQETHE 451 Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529 F+ L A +N +++ KS + + E L Y+ + G P RD ++AQ + + Sbjct: 452 RFMAHLTHLATYYFNAIVNVKKSEVANTLNGREVLSYRNHNGFPHRDEINMLAQFYHTKA 511 Query: 530 NGLKPHTMAARAIGIAYA 583 P A+AIG AYA Sbjct: 512 RDTTPEITMAQAIGFAYA 529 [23][TOP] >UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1 RepID=D0EP81_9VIRU Length = 559 Score = 80.5 bits (197), Expect = 9e-14 Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 3/196 (1%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 184 + + GY PT+ PT+P D K L L + +LPDG YRR GIP Sbjct: 282 LTFDEGYVPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIP 340 Query: 185 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDF 358 SGL+ TQ LDS+ N ++ + GF + + I+ V GDD+ +P + + Sbjct: 341 SGLFITQSLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNL 397 Query: 359 ITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NG 535 + L + A+ +N V++ KS + E L Y+ + G P RD ++AQ + + Sbjct: 398 MDNLVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARD 457 Query: 536 LKPHTMAARAIGIAYA 583 P A+AIG AYA Sbjct: 458 PTPEITMAQAIGFAYA 473 [24][TOP] >UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1 RepID=Q64FP0_WCCV1 Length = 616 Score = 80.1 bits (196), Expect = 1e-13 Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 5/198 (2%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178 + GY PT+ PT+P + + R++ L +L T N +LPDG YRR G Sbjct: 338 LTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394 Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMY 352 IPSGL+ TQ LDS+ N ++ + F + I+ V GDD+ T IP+ + Sbjct: 395 IPSGLFITQLLDSWYNYTMLATILSALHF---DPLHCIIKVQGDDSILRLTTLIPVDQHT 451 Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529 +F+ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + + Sbjct: 452 NFMDHIVRLADTYFNSIVNVKKSEVRNSLNGCEVLSYRNHNGLPHRDEITMLAQFYHTKA 511 Query: 530 NGLKPHTMAARAIGIAYA 583 P A+AIG AYA Sbjct: 512 RDPTPEITMAQAIGFAYA 529 [25][TOP] >UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-2 RepID=Q6BE42_9VIRU Length = 538 Score = 78.6 bits (192), Expect = 3e-13 Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 18/198 (9%) Frame = +2 Query: 44 PTYPDLDE------HKLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 184 PT P LDE H Y R+ NL ++ Y NM + G ++R+ G+P Sbjct: 252 PTLPVLDEETGTQLHPPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMP 311 Query: 185 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER-FILLVLGDDNTG--MTTIPICRMYD 355 SG++ TQ+ DSF N +I+ +L G+ E+ ++ ++GDD + +IPI + Sbjct: 312 SGIFCTQFYDSFYNAVIIVTCLLALGY---EVRHDHLIKLMGDDALFGLLESIPIEHWSE 368 Query: 356 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 535 F+ L AL R+N LS TK T L Y G P R E ++A L +P++ Sbjct: 369 FLDALAAEALFRFNAKLSATKCGYTRTIQGATVLSYTNWNGWPVRSAEDVLAHLLHPKS- 427 Query: 536 LKPHT--MAARAIGIAYA 583 LK + AR+IG+ YA Sbjct: 428 LKDSAPRLMARSIGLYYA 445 [26][TOP] >UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry disease-associated mycovirus RepID=Q65A75_9VIRU Length = 621 Score = 77.0 bits (188), Expect = 1e-12 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 3/193 (1%) Frame = +2 Query: 14 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193 ++GY PT +YP + R+ L + + + +LP+G+ Y R GIPSGL Sbjct: 343 DNGYLPTKDYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGL 402 Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 367 + TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T Sbjct: 403 FITQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTK 459 Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 544 +++ A + V+S KS + + E L Y+ +G P RD ++AQL + + P Sbjct: 460 VQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSP 519 Query: 545 HTMAARAIGIAYA 583 A++IG AYA Sbjct: 520 EITMAQSIGFAYA 532 [27][TOP] >UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=Q4KUU4_9VIRU Length = 616 Score = 75.9 bits (185), Expect = 2e-12 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172 + GY PT+ P +P ++ K + L L W F +LPDG YRR Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392 Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346 GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449 Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526 ++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509 Query: 527 E-NGLKPHTMAARAIGIAYA 583 + P A+AIG AYA Sbjct: 510 KARDPTPEITMAQAIGFAYA 529 [28][TOP] >UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning virus RepID=C0STM0_9VIRU Length = 580 Score = 75.9 bits (185), Expect = 2e-12 Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 4/194 (2%) Frame = +2 Query: 14 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193 N+GY PT +YP D H ++ NL ++ T L DG ++RT GI SG Sbjct: 312 NNGYIPTVDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQ 366 Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITF 367 + TQ++DS N +I+ + GF E + +LGDD+ +IP F+ Sbjct: 367 FTTQFMDSIYNGLMILTILSRMGFVID--ETLPIKLLGDDSVTRLAVSIPASMHESFLIE 424 Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKP- 544 ++ A ++ ++ KS ++ + L Y N G P R L+ L YP++ +P Sbjct: 425 FQRLADYYFSHTINVKKSKISNTPHNVSVLSYANNNGLPVRSRTSLLCALLYPKS-RRPT 483 Query: 545 -HTMAARAIGIAYA 583 + ARAIG+ YA Sbjct: 484 WEHLKARAIGVYYA 497 [29][TOP] >UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R744_9VIRU Length = 616 Score = 75.9 bits (185), Expect = 2e-12 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172 + GY PT+ P +P ++ K + L L W F +LPDG YRR Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392 Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346 GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449 Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526 ++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509 Query: 527 E-NGLKPHTMAARAIGIAYA 583 + P A+AIG AYA Sbjct: 510 KARDPTPEITMAQAIGFAYA 529 [30][TOP] >UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R742_9VIRU Length = 616 Score = 75.9 bits (185), Expect = 2e-12 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172 + GY PT+ P +P ++ K + L L W F +LPDG YRR Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392 Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346 GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449 Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526 ++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509 Query: 527 E-NGLKPHTMAARAIGIAYA 583 + P A+AIG AYA Sbjct: 510 KARDPTPEITMAQAIGFAYA 529 [31][TOP] >UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=A3R739_9VIRU Length = 616 Score = 75.9 bits (185), Expect = 2e-12 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172 + GY PT+ P +P ++ K + L L W F +LPDG YRR Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392 Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346 GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449 Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526 ++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVEKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509 Query: 527 E-NGLKPHTMAARAIGIAYA 583 + P A+AIG AYA Sbjct: 510 KARDPTPEITMAQAIGFAYA 529 [32][TOP] >UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot associated partitivirus RepID=Q65A70_9VIRU Length = 621 Score = 75.5 bits (184), Expect = 3e-12 Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 3/193 (1%) Frame = +2 Query: 14 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193 ++GY PT +YP R+ L + + + +LP+G+ Y R GIPSGL Sbjct: 343 DNGYLPTKDYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGL 402 Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 367 + TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T Sbjct: 403 FITQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTK 459 Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 544 +++ A + V+S KS + + E L Y+ +G P RD ++AQL + + P Sbjct: 460 VQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSP 519 Query: 545 HTMAARAIGIAYA 583 A++IG AYA Sbjct: 520 EITMAQSIGFAYA 532 [33][TOP] >UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1 Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU Length = 367 Score = 75.1 bits (183), Expect = 4e-12 Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 6/195 (3%) Frame = +2 Query: 17 HGYQPTYEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPS 187 +GY PT +YP T+PD ++ L + + + +LP+G+ Y+R GIPS Sbjct: 113 NGYTPTKDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPS 164 Query: 188 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFI 361 GL+ TQ +DS+ N ++ + + + + + I+ V GDD+ IP +F+ Sbjct: 165 GLFITQLMDSWYNYVMLCSIL---HYMDIDPKTCIIKVQGDDSIIRLAILIPKDEHDNFL 221 Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 538 ++ A + ++S KS L E L Y+ G P RD+ K++AQ + + Sbjct: 222 ATMQTVADHLFGAIISMDKSELRNSIENCEVLSYRHFMGLPYRDLLKMLAQFYHTKARDP 281 Query: 539 KPHTMAARAIGIAYA 583 P A+A+G AYA Sbjct: 282 TPEITMAQAVGFAYA 296 [34][TOP] >UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus RepID=B2M1T3_9VIRU Length = 616 Score = 74.3 bits (181), Expect = 6e-12 Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 7/200 (3%) Frame = +2 Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172 + GY PT+ P +P ++ K + L L W F +LPDG YRR Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392 Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346 GIPSGL+ TQ DS+ N ++ + GF S I+ V GDD+ +P R Sbjct: 393 AGIPSGLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449 Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526 ++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509 Query: 527 E-NGLKPHTMAARAIGIAYA 583 + P A+AIG AYA Sbjct: 510 KARDPTPEITMAQAIGFAYA 529 [35][TOP] >UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum partitivirus S RepID=C7ENF4_9VIRU Length = 580 Score = 73.2 bits (178), Expect = 1e-11 Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 2/189 (1%) Frame = +2 Query: 23 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202 Y+PT Y + H+ R++NL ++ + L PDG Y+ T GI SG T Sbjct: 305 YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQT 361 Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY--DFITFLEK 376 Q LDSF N+ +++ + G N E F + V GDD+ +M+ ++ L Sbjct: 362 QLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDSLISIVERRFQMFGISYLDTLAD 420 Query: 377 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 556 A +N LS KS ++ LGY +YG P R + L++ L +PE + A Sbjct: 421 LASYYFNAKLSVKKSFISDTPQGQYVLGYFNHYGIPYRLDDDLLSHLVFPERPQRLEETA 480 Query: 557 ARAIGIAYA 583 A +GIA A Sbjct: 481 ASCVGIAMA 489 [36][TOP] >UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes isometric virus RepID=B7X9J3_9VIRU Length = 587 Score = 65.9 bits (159), Expect = 2e-09 Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 5/192 (2%) Frame = +2 Query: 23 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202 Y PT YP P DE R++NL ++ L G + GI SG T Sbjct: 310 YMPTSFYPNAPT-DES----RLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQT 364 Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-----FITF 367 Q LDSF N+ +I+ + G + + FI T P MY F+ Sbjct: 365 QLLDSFVNMIMILTCLSRAGVNINSKDFFIS---SRGRFTYRTFPEM-MYQLHGMKFLDM 420 Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 547 + A+ +N L+ KS + + ++ LGY +YG+P+R + L++ L +PE Sbjct: 421 IANNAMYYFNAKLNVDKSEINWNTNGMKVLGYPNDYGTPRRTDQDLLSHLFFPERIYSLP 480 Query: 548 TMAARAIGIAYA 583 ++A+ IGIAYA Sbjct: 481 SLASTCIGIAYA 492 [37][TOP] >UniRef100_Q58HI2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Helicobasidium purpureum partitivirus RepID=Q58HI2_9VIRU Length = 162 Score = 62.4 bits (150), Expect = 3e-08 Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 5/162 (3%) Frame = +2 Query: 44 PTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 217 PT+P D K R++ L +L T N +LPDG YRR GIPSGL+ TQ LDS Sbjct: 3 PTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDS 59 Query: 218 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALER 391 + N ++ + GF + + I+ V GDD+ +P + + + L + A+ Sbjct: 60 WYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNY 116 Query: 392 YNMVLSTTKSVLTTLRSKIESLGYQ-CNYGSPKRDIEKLVAQ 514 +N V++ KS + E L Y+ + GSP RD ++AQ Sbjct: 117 FNAVVNVKKSEFGNSLNGREVLSYRNLHMGSPSRDEIMMLAQ 158 [38][TOP] >UniRef100_Q4G3H2 Putative dsRNA-dependent RNA polymerase n=1 Tax=Penicillium stoloniferum virus F RepID=Q4G3H2_9VIRU Length = 538 Score = 54.7 bits (130), Expect = 5e-06 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%) Frame = +2 Query: 104 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 283 FL T++ +LPDG Y++ GIPSG + TQ + S N +L + + + N+ Sbjct: 313 FLKTYFKKTKIMLPDGSLYKKFH-GIPSGSFFTQIIGSIVN-YLAVKTLDNYFSWNARRF 370 Query: 284 RFILLVLGDDNTGMTTIPICRM-YDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 460 R VLGDD++ + IP R D + EK A E + L K + + + LG Sbjct: 371 R----VLGDDSSFL--IPFGRSKVDGVEISEK-AWETFGFTLKLKKLRIANKQQDRKFLG 423 Query: 461 YQCNYGSPKRDIEKLVAQLCYPENGLK 541 YQCN +R + ++ + YPE ++ Sbjct: 424 YQCNAFRYERSTTEWLSMVLYPERDVE 450