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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 335 bits (858), Expect = 2e-90
Identities = 159/194 (81%), Positives = 173/194 (89%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
LIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRRT CG+
Sbjct: 410 LIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRRTHCGV 469
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
PSGLYNTQYLDSFGNLFLIIDAM+EF FT+ EI +F LL+LG DNTGMT + I R+ FI
Sbjct: 470 PSGLYNTQYLDSFGNLFLIIDAMIEFEFTDDEISKFQLLILGGDNTGMTNLAIDRIDKFI 529
Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
TFLE YAL RYNMVL TK +LT+LRSKI +LGY+CNYGSPKRDI KLVAQLC+PENGLK
Sbjct: 530 TFLETYALARYNMVLPKTKCILTSLRSKIVTLGYECNYGSPKRDIHKLVAQLCFPENGLK 589
Query: 542 PHTMAARAIGIAYA 583
HTM+ARA GIAYA
Sbjct: 590 AHTMSARATGIAYA 603
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 284 bits (727), Expect = 3e-75
Identities = 134/194 (69%), Positives = 156/194 (80%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
LIVINHGYQPTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ G+
Sbjct: 399 LIVINHGYQPTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGV 458
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
PSGL NTQYLDSF NLFLIID + EFGFT +EI + ++GDDN+G T + I R+ FI
Sbjct: 459 PSGLLNTQYLDSFCNLFLIIDGLFEFGFTQAEILSIVFFIMGDDNSGFTMMDIERLTQFI 518
Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
F E YAL+RYNMVLS TKSV+TTLRS+IE+L YQCN G+PKR + KL+AQLCYPE+G K
Sbjct: 519 EFFESYALKRYNMVLSKTKSVITTLRSRIETLSYQCNGGNPKRPLGKLIAQLCYPEHGPK 578
Query: 542 PHTMAARAIGIAYA 583
M+ARAIGIAYA
Sbjct: 579 DKYMSARAIGIAYA 592
[3][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 265 bits (678), Expect = 1e-69
Identities = 120/194 (61%), Positives = 153/194 (78%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
+IVI+HGYQPTY+YP+YPDL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC G+
Sbjct: 394 MIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGV 453
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T I ++ +F+
Sbjct: 454 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFTLWSIAKLEEFL 513
Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
+F E YAL R+ MVLS TKSV+T +R KIE+L YQCNYG+PKR + KLVAQLCYPE G +
Sbjct: 514 SFFESYALRRFGMVLSKTKSVITVIRGKIETLSYQCNYGAPKRPLAKLVAQLCYPERGPR 573
Query: 542 PHTMAARAIGIAYA 583
+ARAIG+AYA
Sbjct: 574 AKYTSARAIGMAYA 587
[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 248 bits (634), Expect = 2e-64
Identities = 117/194 (60%), Positives = 146/194 (75%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
LI+IN GYQPT +Y YPDL ++ RM NLLHFLHTWYNNM ++ DG+AY R CG+
Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGV 454
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
PSGL+NTQYLDSFGNL+LIID MLEFG + EI +LL++GDDN+G T + R+ F+
Sbjct: 455 PSGLFNTQYLDSFGNLYLIIDGMLEFGISIDEITSVLLLIMGDDNSGFTHWELLRLTHFL 514
Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
F E YAL RYNMVLS +KSV+T R++IE+L Y N+G P R + KLVAQLCYPE+G+
Sbjct: 515 DFFENYALVRYNMVLSKSKSVITRFRNRIETLSYSANFGMPTRPLGKLVAQLCYPEHGVI 574
Query: 542 PHTMAARAIGIAYA 583
M++RAIGIAYA
Sbjct: 575 DKYMSSRAIGIAYA 588
[5][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 248 bits (632), Expect = 3e-64
Identities = 112/194 (57%), Positives = 149/194 (76%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
L+V+NHGY PTYEYP+YPDL + + R+ NL+ FL TWY NM F+ DG++Y R G+
Sbjct: 391 LLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGV 450
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
PSG+ NTQ+LDSFGNLFL+ID ++EFG T++EI+ +L ++GDDN+ TT I + F+
Sbjct: 451 PSGMLNTQFLDSFGNLFLLIDGLIEFGSTDAEIDDILLFIMGDDNSAFTTWSITHLEQFV 510
Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
+F E YAL RY MVLS TKS++TTLR KIE+L YQCN+G P+R I KLVAQLC+PE G +
Sbjct: 511 SFFETYALSRYGMVLSKTKSIITTLRHKIETLSYQCNFGHPRRPIGKLVAQLCFPERGPR 570
Query: 542 PHTMAARAIGIAYA 583
P M+ARA+G+A+A
Sbjct: 571 PKYMSARAVGMAWA 584
[6][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 230 bits (587), Expect = 5e-59
Identities = 108/194 (55%), Positives = 150/194 (77%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
L++I+HGY PT EY ++ ++ R NL++F TWY NM FL DG+A+RR G+
Sbjct: 422 LLIISHGYMPTSEYED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGV 480
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFI 361
PSG+ TQ+LDSFGNL+LIID++LEFG T +I+ +L ++GDDN+ T I +++DFI
Sbjct: 481 PSGMLLTQFLDSFGNLYLIIDSLLEFGCTYDDIKSLMLFIMGDDNSIFTNWTIDKLHDFI 540
Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK 541
+F+E+Y L+R+NM LS TKSV+TTLRSKIE+L Y+CN+G P+RD+EKL+AQL YPE+GLK
Sbjct: 541 SFMERYCLKRWNMHLSKTKSVITTLRSKIETLSYRCNFGKPRRDVEKLIAQLVYPEHGLK 600
Query: 542 PHTMAARAIGIAYA 583
P M++RAIG+AYA
Sbjct: 601 PQFMSSRAIGLAYA 614
[7][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 174 bits (442), Expect = 3e-42
Identities = 83/182 (45%), Positives = 120/182 (65%)
Frame = +2
Query: 38 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 217
EY T P+ ++ NL+ FL WY +M F+ PDG+AYRRT G+PSG+ TQ++DS
Sbjct: 390 EYQTPPEATVFA--KKVLNLISFLERWYRDMVFVTPDGFAYRRTHAGVPSGILMTQFIDS 447
Query: 218 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYN 397
F NL +++D ++EFGFT+ EI++ ++ ++GDDN T + ++ +F + KY L+R+
Sbjct: 448 FVNLTILLDGLIEFGFTDEEIKQLLVFIMGDDNVIFTPWTLLKLIEFFDWFAKYTLDRFG 507
Query: 398 MVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIA 577
MV++ +KS +T++R KIE LGY NYG P R I KLV QL YPE + M RAIG A
Sbjct: 508 MVINISKSAVTSIRRKIEVLGYTNNYGFPTRSISKLVGQLAYPERHVTDADMCMRAIGFA 567
Query: 578 YA 583
YA
Sbjct: 568 YA 569
[8][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 169 bits (427), Expect = 2e-40
Identities = 77/167 (46%), Positives = 113/167 (67%)
Frame = +2
Query: 80 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259
++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465
Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439
GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525
Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580
KIE LGY NYG P R + KL+ QL YPE + M RAIG A+
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAW 572
[9][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 166 bits (421), Expect = 9e-40
Identities = 76/167 (45%), Positives = 112/167 (67%)
Frame = +2
Query: 80 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259
++++NLL F++TW+ M ++ PDG+AY RT G+PSG+ TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYSRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465
Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439
GF S+I+ ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR
Sbjct: 466 GFHESDIKSALILLMGDDNVVFAPDKLSQLHSFFKFLPDYAKKRWNMKVNVDKSIFTTLR 525
Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580
KIE LGY NYG P R + KL+ QL YPE + M RAIG A+
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHVNDSDMCMRAIGFAW 572
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 165 bits (418), Expect = 2e-39
Identities = 77/167 (46%), Positives = 111/167 (66%)
Frame = +2
Query: 80 HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEF 259
++++NLL F++TW+ M ++ PDG+AYRRT G+PSG+ TQ +DSF NL ++ID++ EF
Sbjct: 406 NKVENLLKFINTWFKEMVYITPDGFAYRRTFAGVPSGILCTQLIDSFVNLVVLIDSLFEF 465
Query: 260 GFTNSEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLR 439
GF S+I ++L++GDDN + +++ F FL YA +R+NM ++ KS+ TTLR
Sbjct: 466 GFHESDITSALILLMGDDNVVFAPDKLSQLHSFFLFLPGYAKKRWNMTVNVDKSIFTTLR 525
Query: 440 SKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMAARAIGIAY 580
KIE LGY NYG P R + KL+ QL YPE M RAIG A+
Sbjct: 526 RKIEILGYTNNYGMPVRSLSKLIGQLAYPERHGFDSDMCMRAIGFAW 572
[11][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 157 bits (398), Expect = 4e-37
Identities = 67/109 (61%), Positives = 88/109 (80%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
+IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+
Sbjct: 394 MIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGV 453
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 328
PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T
Sbjct: 454 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 502
[12][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 157 bits (398), Expect = 4e-37
Identities = 67/109 (61%), Positives = 88/109 (80%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
+IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+
Sbjct: 77 MIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGV 136
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMT 328
PSGL NTQYLDSF NLFLI D ++EFG +++EI + LLV+GDDN+ T
Sbjct: 137 PSGLLNTQYLDSFSNLFLIFDGLIEFGCSDAEIYQIFLLVMGDDNSAFT 185
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 155 bits (392), Expect = 2e-36
Identities = 79/168 (47%), Positives = 110/168 (65%), Gaps = 4/168 (2%)
Frame = +2
Query: 92 NLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTN 271
N+L F+ WY M F+ PDGY Y R G+PSG++ TQ LDSF NLF+ +DA+LEFGF+
Sbjct: 442 NILSFIWWWYVFMVFITPDGYGYVRLLAGVPSGIFMTQILDSFVNLFIFVDALLEFGFSI 501
Query: 272 SEIERFILLVLGDDNTGMTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIE 451
+I+ F L + GDDN + R++DF + +YAL+R++M++S KS +T LR+KIE
Sbjct: 502 DQIKCFRLFIQGDDNLVFYLGDLTRIFDFYEWYPEYALDRWHMIVSPDKSWITRLRTKIE 561
Query: 452 SLGYQCNYGSPKRDIEKLVAQLCYPENGL----KPHTMAARAIGIAYA 583
LGY G P RD+ KL+A L YPE + + + +RAIGIAYA
Sbjct: 562 VLGYTNANGMPHRDVSKLIATLAYPERTILDKNRYPILMSRAIGIAYA 609
[14][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 101 bits (252), Expect = 4e-20
Identities = 69/192 (35%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Frame = +2
Query: 17 HGYQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 190
+GY PT+ YP T D DE + R++NL +++ + L+PDG R T GI SG
Sbjct: 355 NGYHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSG 414
Query: 191 LYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-FITF 367
TQ LDS N+ +I + GF ++++ ++ V GDD+ M + + F+T
Sbjct: 415 YMQTQILDSLYNMVMIFTMVSRLGF---DLDKVVIKVQGDDSIFMLLCCFILIANWFLTM 471
Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 547
+ YAL + VLS KS + E L Y+ G P RD L+AQL +PE
Sbjct: 472 FKHYALYYFGAVLSDKKSEIRDSLEHAEVLKYRNRNGIPYRDPIALLAQLRHPERSDTLQ 531
Query: 548 TMAARAIGIAYA 583
+ ARAIGIAYA
Sbjct: 532 ALMARAIGIAYA 543
[15][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
cryptic virus 1 RepID=B7ZGY8_9VIRU
Length = 587
Score = 92.0 bits (227), Expect = 3e-17
Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
Frame = +2
Query: 14 NHGYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSG 190
+HGYQPT +Y T D D R+ NL ++ LPDG +RR+ G+PSG
Sbjct: 315 SHGYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSG 368
Query: 191 LYNTQYLDSFGN---LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-- 355
L+ TQ+LDS N +F I+DAM F T+ I+ VLGDD+ +T + + YD
Sbjct: 369 LFITQWLDSVYNCIMIFTILDAM-GFEITSD----LIIKVLGDDS--LTRLRLLIPYDQH 421
Query: 356 --FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE 529
F + A ++ VLS KS + + ++ LGY+ N G P RD E L+ L YP+
Sbjct: 422 EAFTIRFKHLAQYYFDAVLSDKKSRIHNTLNGVKCLGYRNNNGLPVRDRESLLTALLYPK 481
Query: 530 NGLKP--HTMAARAIGIAYA 583
+P + AR IGIAYA
Sbjct: 482 -ARRPTFEQLKARCIGIAYA 500
[16][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
1 RepID=Q52UL1_9VIRU
Length = 573
Score = 89.0 bits (219), Expect = 3e-16
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Frame = +2
Query: 23 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202
Y PT YPT + R+ NL +++ T Y + G YRR G+PSG++ T
Sbjct: 294 YCPTRTYPTCRTNPQ-----RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCT 348
Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEK 376
Q+ DSF N +++ + GF + +R+ L VLGDD + IPI + DF+
Sbjct: 349 QFWDSFYNCIMVVTTLEALGFRIT--DRYFLKVLGDDVIFGILKHIPISKWADFLQDFST 406
Query: 377 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TM 553
A R+N L++ K ++ + L Y G PKRD +L+AQL +P++ + +
Sbjct: 407 EARRRFNSKLNSKKCGASSGIHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRL 466
Query: 554 AARAIGIAYA 583
ARAIGI YA
Sbjct: 467 MARAIGIYYA 476
[17][TOP]
>UniRef100_C1KDH6 Putative RNA-dependent RNA polymerase n=1 Tax=Heterobasidion
insulare T-type partitivirus RepID=C1KDH6_9VIRU
Length = 585
Score = 87.0 bits (214), Expect = 1e-15
Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Frame = +2
Query: 47 TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGN 226
TYPD + RM+ L ++ M F+LPD Y R IPSGL+ TQ+LDS N
Sbjct: 323 TYPDSKTDPI--RMERLWNWQRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYN 380
Query: 227 LFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITFLEKYALERYNM 400
L +I + GF +I ++LV GDD+ +P + F E+ A ++
Sbjct: 381 LIMIYTILSAMGF---DITNLMILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDH 437
Query: 401 VLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLK---PHTMAARAIG 571
+ K+ +T +++E LGY N G P RD+ KLVAQL +P N K + A+ G
Sbjct: 438 IARPEKTHVTNSPNEVEVLGYTNNNGYPSRDMTKLVAQLYHPRNVDKTSWKSLLMAKVCG 497
Query: 572 IAYA 583
AYA
Sbjct: 498 FAYA 501
[18][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
mycovirus RepID=Q8B0U3_9VIRU
Length = 598
Score = 84.0 bits (206), Expect = 8e-15
Identities = 63/192 (32%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Frame = +2
Query: 17 HGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLY 196
+GY PT +Y H ++ L +++ M LPDG Y+R GIPSGL+
Sbjct: 320 NGYIPTNKYRESKADPAH-----LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLF 374
Query: 197 NTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMYDFITFL 370
TQ+LDSF N+ +I+ + GF S + + V GDD+ + +P +F
Sbjct: 375 TTQFLDSFYNMIMILTILGRMGFGISTVR---IRVQGDDSLIRLIFHVPANMHAEFKRTF 431
Query: 371 EKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHT 550
E YA ++ V K+ +T ++I +LGY G P RD KL+AQL +P + +
Sbjct: 432 EVYAAYYFDSVARPEKTHITNNPNEINALGYDYPNGYPHRDWRKLLAQLLHPRSTAPRFS 491
Query: 551 -MAARAIGIAYA 583
+ AR GI YA
Sbjct: 492 LLKARTCGIQYA 503
[19][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 82.4 bits (202), Expect = 2e-14
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 1/195 (0%)
Frame = +2
Query: 2 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 181
+ GY PT YP PD + R++NL +++ + +LPDG + GI
Sbjct: 311 MFTFTEGYHPTISYPNAPDTNPD----RLENLWNWMTDAILTVPLMLPDGQLLQFNHSGI 366
Query: 182 PSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY-DF 358
SG + TQ LDS N +I + GF ++++F + V GDD+ ++ + F
Sbjct: 367 YSGYFQTQILDSIYNCVMIYTILSRMGF---DLDKFCIKVQGDDSLMISPYNYTLLEPSF 423
Query: 359 ITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGL 538
+ YA E + L+ KS + E L Y+ + P+R+ +L+A L +PE
Sbjct: 424 LKTFGDYAKEYFGSTLNLKKSEILPSLDGAEVLKYRNHGTMPQREEIQLLAMLRHPERTA 483
Query: 539 KPHTMAARAIGIAYA 583
++ AR IG+ YA
Sbjct: 484 SLPSLMARCIGVTYA 498
[20][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
RepID=Q5XM56_9VIRU
Length = 573
Score = 82.0 bits (201), Expect = 3e-14
Identities = 57/170 (33%), Positives = 89/170 (52%), Gaps = 3/170 (1%)
Frame = +2
Query: 83 RMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFG 262
R+ NL +++ T Y + G YRR G+PSG++ TQ+ DSF N +++ + G
Sbjct: 309 RLQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIFCTQFWDSFYNCIMVVTTLEALG 368
Query: 263 FTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITFLEKYALERYNMVLSTTKSVLTTL 436
F + +R+ L VLGD + IPI + DF+ A R+N L++ K ++
Sbjct: 369 FRIT--DRYFLKVLGDVVIFGILKHIPISKSADFLQDFSTEARRRFNSKLNSKKCGASSG 426
Query: 437 RSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH-TMAARAIGIAYA 583
+ L Y G PKRD +L+AQL +P++ + + ARAIGI YA
Sbjct: 427 IHGAQVLSYINWNGYPKRDSNQLLAQLLHPKSLRDTYPRLMARAIGIYYA 476
[21][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 81.3 bits (199), Expect = 5e-14
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178
+ + GY PT+ PT+P D K R++ L +L T N +LPDG YRR G
Sbjct: 338 LTFDEGYVPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394
Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMY 352
IPSGL+ TQ LDS+ N ++ + GF + + I+ V GDD+ +P +
Sbjct: 395 IPSGLFITQLLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQ 451
Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529
+ + L + A+ +N V++ KS + E L Y+ + G P RD ++AQ + +
Sbjct: 452 NLMDNLVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKA 511
Query: 530 NGLKPHTMAARAIGIAYA 583
P A+AIG AYA
Sbjct: 512 RDPTPEITMAQAIGFAYA 529
[22][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 80.9 bits (198), Expect = 7e-14
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178
+ + GY PT+ P +P + K R++ L +L T N +LPDG YRR G
Sbjct: 338 LTFDEGYVPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394
Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMY 352
IPSGL+ TQ LDS+ N ++ + GF + ++ I+ V GDD+ T IP
Sbjct: 395 IPSGLFITQLLDSWYNYTMLATILSALGF---DPKQCIIKVQGDDSIIRLTVLIPQETHE 451
Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529
F+ L A +N +++ KS + + E L Y+ + G P RD ++AQ + +
Sbjct: 452 RFMAHLTHLATYYFNAIVNVKKSEVANTLNGREVLSYRNHNGFPHRDEINMLAQFYHTKA 511
Query: 530 NGLKPHTMAARAIGIAYA 583
P A+AIG AYA
Sbjct: 512 RDTTPEITMAQAIGFAYA 529
[23][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 80.5 bits (197), Expect = 9e-14
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 3/196 (1%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 184
+ + GY PT+ PT+P D K L L + +LPDG YRR GIP
Sbjct: 282 LTFDEGYVPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIP 340
Query: 185 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDF 358
SGL+ TQ LDS+ N ++ + GF + + I+ V GDD+ +P + +
Sbjct: 341 SGLFITQSLDSWYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNL 397
Query: 359 ITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NG 535
+ L + A+ +N V++ KS + E L Y+ + G P RD ++AQ + +
Sbjct: 398 MDNLVQLAVNYFNAVVNVKKSEFGNSLNGREVLSYRNHNGFPHRDEIMMLAQFYHTKARD 457
Query: 536 LKPHTMAARAIGIAYA 583
P A+AIG AYA
Sbjct: 458 PTPEITMAQAIGFAYA 473
[24][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 80.1 bits (196), Expect = 1e-13
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCG 178
+ GY PT+ PT+P + + R++ L +L T N +LPDG YRR G
Sbjct: 338 LTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYRRHFAG 394
Query: 179 IPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDN--TGMTTIPICRMY 352
IPSGL+ TQ LDS+ N ++ + F + I+ V GDD+ T IP+ +
Sbjct: 395 IPSGLFITQLLDSWYNYTMLATILSALHF---DPLHCIIKVQGDDSILRLTTLIPVDQHT 451
Query: 353 DFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE- 529
+F+ + + A +N +++ KS + + E L Y+ + G P RD ++AQ + +
Sbjct: 452 NFMDHIVRLADTYFNSIVNVKKSEVRNSLNGCEVLSYRNHNGLPHRDEITMLAQFYHTKA 511
Query: 530 NGLKPHTMAARAIGIAYA 583
P A+AIG AYA
Sbjct: 512 RDPTPEITMAQAIGFAYA 529
[25][TOP]
>UniRef100_Q6BE42 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-2 RepID=Q6BE42_9VIRU
Length = 538
Score = 78.6 bits (192), Expect = 3e-13
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Frame = +2
Query: 44 PTYPDLDE------HKLY-------HRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIP 184
PT P LDE H Y R+ NL ++ Y NM + G ++R+ G+P
Sbjct: 252 PTLPVLDEETGTQLHPPYSEPFTNPQRLRNLWFWIRYAYFNMAAVTTTGKIFKRSFAGMP 311
Query: 185 SGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIER-FILLVLGDDNTG--MTTIPICRMYD 355
SG++ TQ+ DSF N +I+ +L G+ E+ ++ ++GDD + +IPI +
Sbjct: 312 SGIFCTQFYDSFYNAVIIVTCLLALGY---EVRHDHLIKLMGDDALFGLLESIPIEHWSE 368
Query: 356 FITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENG 535
F+ L AL R+N LS TK T L Y G P R E ++A L +P++
Sbjct: 369 FLDALAAEALFRFNAKLSATKCGYTRTIQGATVLSYTNWNGWPVRSAEDVLAHLLHPKS- 427
Query: 536 LKPHT--MAARAIGIAYA 583
LK + AR+IG+ YA
Sbjct: 428 LKDSAPRLMARSIGLYYA 445
[26][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 77.0 bits (188), Expect = 1e-12
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Frame = +2
Query: 14 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193
++GY PT +YP + R+ L + + + +LP+G+ Y R GIPSGL
Sbjct: 343 DNGYLPTKDYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGL 402
Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 367
+ TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T
Sbjct: 403 FITQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTK 459
Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 544
+++ A + V+S KS + + E L Y+ +G P RD ++AQL + + P
Sbjct: 460 VQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSP 519
Query: 545 HTMAARAIGIAYA 583
A++IG AYA
Sbjct: 520 EITMAQSIGFAYA 532
[27][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 75.9 bits (185), Expect = 2e-12
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
+ GY PT+ P +P ++ K + L L W F +LPDG YRR
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392
Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449
Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ +
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509
Query: 527 E-NGLKPHTMAARAIGIAYA 583
+ P A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529
[28][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 75.9 bits (185), Expect = 2e-12
Identities = 58/194 (29%), Positives = 92/194 (47%), Gaps = 4/194 (2%)
Frame = +2
Query: 14 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193
N+GY PT +YP D H ++ NL ++ T L DG ++RT GI SG
Sbjct: 312 NNGYIPTVDYP---DSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQ 366
Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTG--MTTIPICRMYDFITF 367
+ TQ++DS N +I+ + GF E + +LGDD+ +IP F+
Sbjct: 367 FTTQFMDSIYNGLMILTILSRMGFVID--ETLPIKLLGDDSVTRLAVSIPASMHESFLIE 424
Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKP- 544
++ A ++ ++ KS ++ + L Y N G P R L+ L YP++ +P
Sbjct: 425 FQRLADYYFSHTINVKKSKISNTPHNVSVLSYANNNGLPVRSRTSLLCALLYPKS-RRPT 483
Query: 545 -HTMAARAIGIAYA 583
+ ARAIG+ YA
Sbjct: 484 WEHLKARAIGVYYA 497
[29][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 75.9 bits (185), Expect = 2e-12
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
+ GY PT+ P +P ++ K + L L W F +LPDG YRR
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392
Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449
Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ +
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509
Query: 527 E-NGLKPHTMAARAIGIAYA 583
+ P A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529
[30][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 75.9 bits (185), Expect = 2e-12
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
+ GY PT+ P +P ++ K + L L W F +LPDG YRR
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392
Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449
Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ +
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509
Query: 527 E-NGLKPHTMAARAIGIAYA 583
+ P A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529
[31][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 75.9 bits (185), Expect = 2e-12
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
+ GY PT+ P +P ++ K + L L W F +LPDG YRR
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392
Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
GIPSGL+ TQ LDS+ N ++ + GF S I+ V GDD+ +P R
Sbjct: 393 AGIPSGLFITQLLDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449
Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ +
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVEKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509
Query: 527 E-NGLKPHTMAARAIGIAYA 583
+ P A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529
[32][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 75.5 bits (184), Expect = 3e-12
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Frame = +2
Query: 14 NHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGL 193
++GY PT +YP R+ L + + + +LP+G+ Y R GIPSGL
Sbjct: 343 DNGYLPTKDYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGL 402
Query: 194 YNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFITF 367
+ TQ +DS+ N ++ + GF + I+ V GDD+ + IP F+T
Sbjct: 403 FITQLIDSWYNYTMLATILSAMGF---DPRSCIIKVQGDDSIIRLSALIPPDAHDSFLTK 459
Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGLKP 544
+++ A + V+S KS + + E L Y+ +G P RD ++AQL + + P
Sbjct: 460 VQELADYYFQSVVSVNKSEVRNELNGCEVLSYRHRHGLPYRDELAMLAQLYHTKARNPSP 519
Query: 545 HTMAARAIGIAYA 583
A++IG AYA
Sbjct: 520 EITMAQSIGFAYA 532
[33][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
Length = 367
Score = 75.1 bits (183), Expect = 4e-12
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Frame = +2
Query: 17 HGYQPTYEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPS 187
+GY PT +YP T+PD ++ L + + + +LP+G+ Y+R GIPS
Sbjct: 113 NGYTPTKDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPS 164
Query: 188 GLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTT--IPICRMYDFI 361
GL+ TQ +DS+ N ++ + + + + + I+ V GDD+ IP +F+
Sbjct: 165 GLFITQLMDSWYNYVMLCSIL---HYMDIDPKTCIIKVQGDDSIIRLAILIPKDEHDNFL 221
Query: 362 TFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPE-NGL 538
++ A + ++S KS L E L Y+ G P RD+ K++AQ + +
Sbjct: 222 ATMQTVADHLFGAIISMDKSELRNSIENCEVLSYRHFMGLPYRDLLKMLAQFYHTKARDP 281
Query: 539 KPHTMAARAIGIAYA 583
P A+A+G AYA
Sbjct: 282 TPEITMAQAVGFAYA 296
[34][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 74.3 bits (181), Expect = 6e-12
Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Frame = +2
Query: 5 IVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----LLPDGYAYRRTC 172
+ GY PT+ P +P ++ K + L L W F +LPDG YRR
Sbjct: 338 LTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPIILPDGRMYRRHF 392
Query: 173 CGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICR 346
GIPSGL+ TQ DS+ N ++ + GF S I+ V GDD+ +P R
Sbjct: 393 AGIPSGLFITQLFDSWYNYTMLATILHALGFNPSNC---IIKVQGDDSIIRLNVLVPSER 449
Query: 347 MYDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYP 526
++ + + A +N +++ KS + + E L Y+ + G P RD ++AQ +
Sbjct: 450 HDHLMSRIVELAEYYFNSIVNVKKSEIRNRLNGCEVLSYRNHNGLPFRDEIAMLAQFYHT 509
Query: 527 E-NGLKPHTMAARAIGIAYA 583
+ P A+AIG AYA
Sbjct: 510 KARDPTPEITMAQAIGFAYA 529
[35][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 73.2 bits (178), Expect = 1e-11
Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Frame = +2
Query: 23 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202
Y+PT Y + H+ R++NL ++ + L PDG Y+ T GI SG T
Sbjct: 305 YEPTIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASGFQQT 361
Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMY--DFITFLEK 376
Q LDSF N+ +++ + G N E F + V GDD+ +M+ ++ L
Sbjct: 362 QLLDSFVNMIMLLTVLSANGI-NIEHPDFWIKVQGDDSLISIVERRFQMFGISYLDTLAD 420
Query: 377 YALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPHTMA 556
A +N LS KS ++ LGY +YG P R + L++ L +PE + A
Sbjct: 421 LASYYFNAKLSVKKSFISDTPQGQYVLGYFNHYGIPYRLDDDLLSHLVFPERPQRLEETA 480
Query: 557 ARAIGIAYA 583
A +GIA A
Sbjct: 481 ASCVGIAMA 489
[36][TOP]
>UniRef100_B7X9J3 Putative RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes
isometric virus RepID=B7X9J3_9VIRU
Length = 587
Score = 65.9 bits (159), Expect = 2e-09
Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 5/192 (2%)
Frame = +2
Query: 23 YQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNT 202
Y PT YP P DE R++NL ++ L G + GI SG T
Sbjct: 310 YMPTSFYPNAPT-DES----RLENLWEWMTYNIKKYPIRLSSGKLSQWRFNGIASGFQQT 364
Query: 203 QYLDSFGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGMTTIPICRMYD-----FITF 367
Q LDSF N+ +I+ + G + + FI T P MY F+
Sbjct: 365 QLLDSFVNMIMILTCLSRAGVNINSKDFFIS---SRGRFTYRTFPEM-MYQLHGMKFLDM 420
Query: 368 LEKYALERYNMVLSTTKSVLTTLRSKIESLGYQCNYGSPKRDIEKLVAQLCYPENGLKPH 547
+ A+ +N L+ KS + + ++ LGY +YG+P+R + L++ L +PE
Sbjct: 421 IANNAMYYFNAKLNVDKSEINWNTNGMKVLGYPNDYGTPRRTDQDLLSHLFFPERIYSLP 480
Query: 548 TMAARAIGIAYA 583
++A+ IGIAYA
Sbjct: 481 SLASTCIGIAYA 492
[37][TOP]
>UniRef100_Q58HI2 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Helicobasidium
purpureum partitivirus RepID=Q58HI2_9VIRU
Length = 162
Score = 62.4 bits (150), Expect = 3e-08
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Frame = +2
Query: 44 PTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGIPSGLYNTQYLDS 217
PT+P D K R++ L +L T N +LPDG YRR GIPSGL+ TQ LDS
Sbjct: 3 PTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLFITQLLDS 59
Query: 218 FGNLFLIIDAMLEFGFTNSEIERFILLVLGDDNTGM--TTIPICRMYDFITFLEKYALER 391
+ N ++ + GF + + I+ V GDD+ +P + + + L + A+
Sbjct: 60 WYNYTMLATLLSALGF---DPKHCIIKVQGDDSIIRLNVLVPQDQHQNLMDNLVQLAVNY 116
Query: 392 YNMVLSTTKSVLTTLRSKIESLGYQ-CNYGSPKRDIEKLVAQ 514
+N V++ KS + E L Y+ + GSP RD ++AQ
Sbjct: 117 FNAVVNVKKSEFGNSLNGREVLSYRNLHMGSPSRDEIMMLAQ 158
[38][TOP]
>UniRef100_Q4G3H2 Putative dsRNA-dependent RNA polymerase n=1 Tax=Penicillium
stoloniferum virus F RepID=Q4G3H2_9VIRU
Length = 538
Score = 54.7 bits (130), Expect = 5e-06
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Frame = +2
Query: 104 FLHTWYNNMTFLLPDGYAYRRTCCGIPSGLYNTQYLDSFGNLFLIIDAMLEFGFTNSEIE 283
FL T++ +LPDG Y++ GIPSG + TQ + S N +L + + + N+
Sbjct: 313 FLKTYFKKTKIMLPDGSLYKKFH-GIPSGSFFTQIIGSIVN-YLAVKTLDNYFSWNARRF 370
Query: 284 RFILLVLGDDNTGMTTIPICRM-YDFITFLEKYALERYNMVLSTTKSVLTTLRSKIESLG 460
R VLGDD++ + IP R D + EK A E + L K + + + LG
Sbjct: 371 R----VLGDDSSFL--IPFGRSKVDGVEISEK-AWETFGFTLKLKKLRIANKQQDRKFLG 423
Query: 461 YQCNYGSPKRDIEKLVAQLCYPENGLK 541
YQCN +R + ++ + YPE ++
Sbjct: 424 YQCNAFRYERSTTEWLSMVLYPERDVE 450