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[1][TOP] >UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus RepID=Q64959_9SECO Length = 510 Score = 227 bits (579), Expect = 4e-58 Identities = 104/182 (57%), Positives = 141/182 (77%) Frame = -3 Query: 571 LISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDF 392 ++SHL P+LG A+W+VFDA+GH+PT+V+TTVELES+RHL PHV ILKD+TT TW+L+F Sbjct: 54 MVSHLFTSPYLGMAIWYVFDAYGHIPTDVTTTVELESIRHLSPHVHILKDNTTSTWILNF 113 Query: 391 HRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLT 212 HR GQSL+F+G GF+KP +W+I+ASSAQ+ CSADV +V+E Y L +LT Sbjct: 114 HREGGQSLNFAGPGFMKPKVWIIAASSAQMPCSADVQYVVEGYPQEKVSSEDLLRRKILT 173 Query: 211 YPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGV 32 + L+DLD++L+P QLA+GT+A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+ Sbjct: 174 LSVESTHLADLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGI 233 Query: 31 GG 26 GG Sbjct: 234 GG 235 [2][TOP] >UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6JX06_9SECO Length = 1350 Score = 224 bits (571), Expect = 4e-57 Identities = 102/183 (55%), Positives = 139/183 (75%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +LISHL+ F G A+W+VFDA+GH+P++++TT+EL+ VR+L PH+ +L++ T+ W +D Sbjct: 898 KLISHLAPSQFCGVAIWYVFDAYGHIPSDITTTIELDMVRNLSPHIHVLREPTSAVWTID 957 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 FHR+CGQSL+F+G GF P LWVI+A+SAQL SA V + LEA TG+R V+GLAT+ VL Sbjct: 958 FHRYCGQSLNFAGRGFCNPYLWVIAATSAQLPWSAPVVYRLEALVTGERYVQGLATEGVL 1017 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 YPI P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLG Sbjct: 1018 EYPISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLG 1077 Query: 34 VGG 26 VGG Sbjct: 1078 VGG 1080 [3][TOP] >UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=UPI0000163D16 Length = 514 Score = 219 bits (558), Expect = 1e-55 Identities = 100/183 (54%), Positives = 136/183 (74%) Frame = -3 Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389 ISHL+ F G A+W++FDA+G +P++V+T++ELE R LCPHV +L+DS T W +DFH Sbjct: 56 ISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHVHVLRDSKTSVWTIDFH 115 Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209 + CGQSL+FSG GF KPTLWVI+AS+AQL SA V + LEA A GD I GLAT S++TY Sbjct: 116 KICGQSLNFSGRGFSKPTLWVIAASTAQLPWSAQVTYRLEALAQGDEIAHGLATRSIVTY 175 Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29 PI E L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFLG+G Sbjct: 176 PISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIG 235 Query: 28 GTV 20 GT+ Sbjct: 236 GTI 238 [4][TOP] >UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV Length = 1324 Score = 219 bits (558), Expect = 1e-55 Identities = 100/183 (54%), Positives = 136/183 (74%) Frame = -3 Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389 ISHL+ F G A+W++FDA+G +P++V+T++ELE R LCPHV +L+DS T W +DFH Sbjct: 866 ISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHVHVLRDSKTSVWTIDFH 925 Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209 + CGQSL+FSG GF KPTLWVI+AS+AQL SA V + LEA A GD I GLAT S++TY Sbjct: 926 KICGQSLNFSGRGFSKPTLWVIAASTAQLPWSAQVTYRLEALAQGDEIAHGLATRSIVTY 985 Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29 PI E L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFLG+G Sbjct: 986 PISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIG 1045 Query: 28 GTV 20 GT+ Sbjct: 1046 GTI 1048 [5][TOP] >UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO Length = 1344 Score = 207 bits (527), Expect = 5e-52 Identities = 97/186 (52%), Positives = 137/186 (73%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 R +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L+D+TT +W++D Sbjct: 887 RAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTLRDATTSSWIID 946 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 FH+ CGQ+L+FSG GF KPTL+V+ AS QL SA+ F LE YATG+R+VRGL +++ L Sbjct: 947 FHKMCGQTLNFSGPGFCKPTLYVVVASEFQLARSAETKFRLEFYATGERLVRGL-SENPL 1005 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 TYPI P L DLD+VL +A+GT T +P++LA + + + + YSYA G+LSHFLG Sbjct: 1006 TYPIKPGHLEDLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLG 1065 Query: 34 VGGTVI 17 VGG +I Sbjct: 1066 VGGDII 1071 [6][TOP] >UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B Length = 511 Score = 204 bits (519), Expect = 4e-51 Identities = 95/186 (51%), Positives = 136/186 (73%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 R +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L+D+TT +W++D Sbjct: 54 RAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTLRDATTSSWIID 113 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 FH+ CGQ+L+FSG GF KPTL+++ AS QL SA+ F LE YATG+R+VRGL +++ L Sbjct: 114 FHKMCGQTLNFSGPGFCKPTLYIVVASEFQLARSAETKFRLEFYATGERLVRGL-SENPL 172 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 TYPI L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFLG Sbjct: 173 TYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLG 232 Query: 34 VGGTVI 17 VGG +I Sbjct: 233 VGGEII 238 [7][TOP] >UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO Length = 1343 Score = 204 bits (519), Expect = 4e-51 Identities = 95/186 (51%), Positives = 136/186 (73%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 R +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L+D+TT +W++D Sbjct: 886 RAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTLRDATTSSWIID 945 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 FH+ CGQ+L+FSG GF KPTL+++ AS QL SA+ F LE YATG+R+VRGL +++ L Sbjct: 946 FHKMCGQTLNFSGPGFCKPTLYIVVASEFQLARSAETKFRLEFYATGERLVRGL-SENPL 1004 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 TYPI L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFLG Sbjct: 1005 TYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLG 1064 Query: 34 VGGTVI 17 VGG +I Sbjct: 1065 VGGEII 1070 [8][TOP] >UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE Length = 520 Score = 201 bits (511), Expect = 3e-50 Identities = 96/183 (52%), Positives = 132/183 (72%) Frame = -3 Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389 ISHL+ F G A+W++FDA+G +P +V+TT ELE R PHVQ+L+D +T TWV+DFH Sbjct: 56 ISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHVQVLRDVSTSTWVIDFH 115 Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209 + CGQ+L+FSG G+ P +WVI+AS+ QL S F LE Y G+++VRGLA + L+Y Sbjct: 116 KICGQTLNFSGQGYCVPKIWVIAASTFQLARSTATKFRLEFYTRGEKLVRGLA-EQPLSY 174 Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29 PI L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFLGVG Sbjct: 175 PIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVG 234 Query: 28 GTV 20 GT+ Sbjct: 235 GTI 237 [9][TOP] >UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV Length = 1357 Score = 201 bits (511), Expect = 3e-50 Identities = 96/183 (52%), Positives = 132/183 (72%) Frame = -3 Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389 ISHL+ F G A+W++FDA+G +P +V+TT ELE R PHVQ+L+D +T TWV+DFH Sbjct: 893 ISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHVQVLRDVSTSTWVIDFH 952 Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209 + CGQ+L+FSG G+ P +WVI+AS+ QL S F LE Y G+++VRGLA + L+Y Sbjct: 953 KICGQTLNFSGQGYCVPKIWVIAASTFQLARSTATKFRLEFYTRGEKLVRGLA-EQPLSY 1011 Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29 PI L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFLGVG Sbjct: 1012 PIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVG 1071 Query: 28 GTV 20 GT+ Sbjct: 1072 GTI 1074 [10][TOP] >UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus RepID=UPI0000164A26 Length = 564 Score = 118 bits (296), Expect = 3e-25 Identities = 68/190 (35%), Positives = 103/190 (54%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +LI HL PF G + + + D G++ + T++ E + H+ D ++ +VLD Sbjct: 54 KLICHLPRAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSDVSSYEFVLD 113 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 +HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+ + R LA VL Sbjct: 114 WHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEELPRTLAPSPVL 173 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 +YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G Sbjct: 174 SYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQG 232 Query: 34 VGGTVIICHG 5 +GG + HG Sbjct: 233 IGG---VLHG 239 [11][TOP] >UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus RepID=Q1T7B1_CNSV Length = 569 Score = 118 bits (296), Expect = 3e-25 Identities = 68/190 (35%), Positives = 103/190 (54%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +LI HL PF G + + + D G++ + T++ E + H+ D ++ +VLD Sbjct: 66 KLICHLPRAPFAGISFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSDVSSYEFVLD 125 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 +HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+ + R LA VL Sbjct: 126 WHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEELPRTLAPSPVL 185 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 +YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G Sbjct: 186 SYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQG 244 Query: 34 VGGTVIICHG 5 +GG + HG Sbjct: 245 IGG---VLHG 251 [12][TOP] >UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV Length = 1240 Score = 118 bits (296), Expect = 3e-25 Identities = 68/190 (35%), Positives = 103/190 (54%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +LI HL PF G + + + D G++ + T++ E + H+ D ++ +VLD Sbjct: 737 KLICHLPRAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSDVSSYEFVLD 796 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 +HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+ + R LA VL Sbjct: 797 WHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEELPRTLAPSPVL 856 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 +YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G Sbjct: 857 SYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQG 915 Query: 34 VGGTVIICHG 5 +GG + HG Sbjct: 916 IGG---VLHG 922 [13][TOP] >UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6XPY1_9SECO Length = 330 Score = 68.9 bits (167), Expect = 3e-10 Identities = 33/60 (55%), Positives = 42/60 (70%) Frame = -3 Query: 205 IGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGG 26 I P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG Sbjct: 1 ISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGG 60 [14][TOP] >UniRef100_Q6JX05 P2 protein n=1 Tax=Grapevine deformation virus RepID=Q6JX05_9SECO Length = 1107 Score = 63.2 bits (152), Expect = 1e-08 Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 3/178 (1%) Frame = -3 Query: 544 FLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFHRFCGQSLS 365 F G FDA+ + T+++TT + PH + T T LD+ CG ++ Sbjct: 663 FTGLTWVMSFDAYNRITTSITTTASPVYTLSV-PHWLLFHAKGTTTCELDYGELCGHAMW 721 Query: 364 FSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTYPIGPESLS 185 F T F P L + E +AD FV+E YA + + L + + P S Sbjct: 722 FESTTFESPKLHFTCITGNNKELAADWEFVVELYAEMEPVSSFLGRPN-FVHTANPTLGS 780 Query: 184 DLDMVLSPTQLALGTSAA---TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTV 20 L P AL T++A AL L +S T YSY +LS+FLG GG + Sbjct: 781 FKFFTLQPQYYALNTASAIKNVALDLGSTLRSGTNL---VYSYNNALLSYFLGFGGII 835 [15][TOP] >UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV Length = 1084 Score = 63.2 bits (152), Expect = 1e-08 Identities = 48/185 (25%), Positives = 83/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + +D Sbjct: 630 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 688 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG +L FS T F P L + E +AD FV+E YA + L + + Sbjct: 689 YGELCGHALWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 748 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L T++A L +++ + Y+Y +LS++LG Sbjct: 749 -YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLG 807 Query: 34 VGGTV 20 VGG V Sbjct: 808 VGGVV 812 [16][TOP] >UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV Length = 1118 Score = 62.0 bits (149), Expect = 3e-08 Identities = 46/185 (24%), Positives = 83/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + +D Sbjct: 664 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 722 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ FS T F P L + E +AD FV+E YA + L + + Sbjct: 723 YGELCGHAMWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 782 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L T++A L +++ + Y+Y +LS++LG Sbjct: 783 -YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLG 841 Query: 34 VGGTV 20 +GG V Sbjct: 842 IGGVV 846 [17][TOP] >UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV Length = 1083 Score = 61.6 bits (148), Expect = 4e-08 Identities = 47/185 (25%), Positives = 83/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + +D Sbjct: 629 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 687 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG +L FS T F P L + E +AD FV+E YA + L + + Sbjct: 688 YGELCGHALWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 747 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L T++A L +++ + Y+Y +LS++LG Sbjct: 748 -YSAEAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLG 806 Query: 34 VGGTV 20 +GG V Sbjct: 807 IGGVV 811 [18][TOP] >UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus RepID=B1A9X8_ARMV Length = 521 Score = 61.2 bits (147), Expect = 5e-08 Identities = 46/185 (24%), Positives = 83/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + +D Sbjct: 67 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 125 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ FS T F P L + E +AD FV+E YA + L + + Sbjct: 126 YGELCGHAMWFSTTTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 185 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L T++A L +++ + Y+Y +LS++LG Sbjct: 186 -YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLG 244 Query: 34 VGGTV 20 +GG V Sbjct: 245 IGGVV 249 [19][TOP] >UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV Length = 1110 Score = 60.8 bits (146), Expect = 7e-08 Identities = 46/185 (24%), Positives = 83/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++ST V + PH + + T + +D Sbjct: 656 KVVVRYPANAFTGITWVMSFDAYDRITSSIST-VASPTYTLSVPHWLLHHKNGTTSCEID 714 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ F+ T F P L + E +AD FV+E YA + L + + Sbjct: 715 YGTLCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGKPNFI 774 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + LGT++A L +++ + Y+Y +LS +LG Sbjct: 775 -YSADAFNGSFKFLTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLG 833 Query: 34 VGGTV 20 +GG V Sbjct: 834 IGGVV 838 [20][TOP] >UniRef100_A0A9J6 Polyprotein P2 123kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J6_ARMV Length = 1122 Score = 59.3 bits (142), Expect = 2e-07 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 6/189 (3%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + ++++TT + PH + + T T +D Sbjct: 669 KVVIRYPANAFTGLTWVMSFDAYNRITSSITTTASPTYTLSV-PHWLLHHKNGTTTCEVD 727 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + + CG ++ FS T F P L + +AD FV+E YA + A DS L Sbjct: 728 YGKLCGHAMWFSTTTFETPKLHFTCLTGNNKALAADWEFVVELYAEFE------AADSFL 781 Query: 214 TYP-----IGPESLSDLDMVLSPTQLALGTSAA-TALPLTLAEKSVTTSGIETYSYAMGI 53 P G S L P AL T AA ++PL L + +++ + Y++ + Sbjct: 782 GKPNFVHRNGAFEGSFEYFTLPPLNYALNTIAAYKSIPLNLGQ-TLSDGTSKVYNFNNTL 840 Query: 52 LSHFLGVGG 26 LS++LG+GG Sbjct: 841 LSYYLGLGG 849 [21][TOP] >UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532 Length = 505 Score = 58.9 bits (141), Expect = 3e-07 Identities = 44/185 (23%), Positives = 82/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + ++++TT + PH + + T + +D Sbjct: 51 KVVIRYPANAFTGITWVMSFDAYNRITSSITTTASPAYTLSV-PHWLLHHKNGTTSCDID 109 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ F+ T F P L + E +AD FV+E YA + L + Sbjct: 110 YGELCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPN-F 168 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L T++A L +++ + Y+Y +LS++LG Sbjct: 169 VYSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLG 228 Query: 34 VGGTV 20 +GG V Sbjct: 229 IGGVV 233 [22][TOP] >UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN Length = 1110 Score = 58.9 bits (141), Expect = 3e-07 Identities = 44/185 (23%), Positives = 82/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + ++++TT + PH + + T + +D Sbjct: 656 KVVIRYPANAFTGITWVMSFDAYNRITSSITTTASPAYTLSV-PHWLLHHKNGTTSCDID 714 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ F+ T F P L + E +AD FV+E YA + L + Sbjct: 715 YGELCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPN-F 773 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L T++A L +++ + Y+Y +LS++LG Sbjct: 774 VYSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLG 833 Query: 34 VGGTV 20 +GG V Sbjct: 834 IGGVV 838 [23][TOP] >UniRef100_P24819 Coat protein (Fragment) n=1 Tax=Arabis mosaic virus RepID=POL2_ARMV Length = 506 Score = 58.2 bits (139), Expect = 5e-07 Identities = 44/185 (23%), Positives = 82/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + LD Sbjct: 52 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDLD 110 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ F T F P L + E +AD FV+E YA + L + + Sbjct: 111 YGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 170 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + + S + + P + L ++A L +++ + Y++ +LS++LG Sbjct: 171 -YSLDAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 229 Query: 34 VGGTV 20 +GG V Sbjct: 230 IGGIV 234 [24][TOP] >UniRef100_Q65030 Coat protein n=1 Tax=Arabis mosaic virus (isolate Syrah) RepID=POL2_ARMVS Length = 1131 Score = 57.8 bits (138), Expect = 6e-07 Identities = 44/185 (23%), Positives = 82/185 (44%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + +D Sbjct: 677 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 735 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ FS T F P L + E +AD FV+E YA + L + + Sbjct: 736 YGELCGHAMWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 795 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L ++A L +++ + Y++ +LS++LG Sbjct: 796 -YSADAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 854 Query: 34 VGGTV 20 +GG V Sbjct: 855 IGGIV 859 [25][TOP] >UniRef100_Q65029 Polyprotein P2' 119kDa n=1 Tax=Arabis mosaic virus RepID=Q65029_ARMV Length = 1084 Score = 57.0 bits (136), Expect = 1e-06 Identities = 44/185 (23%), Positives = 81/185 (43%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + LD Sbjct: 630 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDLD 688 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ F T F P L + E +AD FV+E YA + L + + Sbjct: 689 YGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 748 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L ++A L +++ + Y++ +LS++LG Sbjct: 749 -YSADAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 807 Query: 34 VGGTV 20 +GG V Sbjct: 808 IGGIV 812 [26][TOP] >UniRef100_Q65028 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus RepID=Q65028_ARMV Length = 737 Score = 57.0 bits (136), Expect = 1e-06 Identities = 44/185 (23%), Positives = 81/185 (43%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395 +++ A F G FDA+ + +++STT + PH + + T + LD Sbjct: 283 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHRNGTTSCDLD 341 Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215 + CG ++ F T F P L + E +AD FV+E YA + L + + Sbjct: 342 YGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 401 Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35 Y + S + + P + L ++A L +++ + Y++ +LS++LG Sbjct: 402 -YSADAFNGSLKYLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 460 Query: 34 VGGTV 20 +GG V Sbjct: 461 IGGVV 465 [27][TOP] >UniRef100_Q9QRA4 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus RepID=Q9QRA4_9SECO Length = 562 Score = 54.3 bits (129), Expect = 7e-06 Identities = 50/189 (26%), Positives = 73/189 (38%), Gaps = 4/189 (2%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHVQILKDSTTDTW 404 RL + F G ++ DAFG +NV S V+L S+ L V L D TW Sbjct: 59 RLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEVISLADGPMVTW 116 Query: 403 VLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATD 224 D R CG L +S + KP ++ + S + AD F + Sbjct: 117 TFDIGRLCGHGLYYSEGAYAKPKIYFLILSDNDVPAEADWQFTYQLLFEDHTFSNSFGAV 176 Query: 223 SVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGIETYSYAMGILS 47 +T P L D+ PT++ L T A A L +V + + T + +L Sbjct: 177 PFITLPHIFNKL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNMSTLNANQALLR 235 Query: 46 HFLGVGGTV 20 F G GT+ Sbjct: 236 FFQGSNGTL 244 [28][TOP] >UniRef100_A3FEN3 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus RepID=A3FEN3_9SECO Length = 562 Score = 53.9 bits (128), Expect = 9e-06 Identities = 50/189 (26%), Positives = 72/189 (38%), Gaps = 4/189 (2%) Frame = -3 Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHVQILKDSTTDTW 404 RL + F G ++ DAFG NV S V+L S+ L V L D TW Sbjct: 59 RLRCFIPTNIFCGHSMMCSLDAFGRYDPNVLGASFPVKLASL--LPTEVISLADGPVVTW 116 Query: 403 VLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATD 224 D R CG L + + KP ++ + S + AD F + Sbjct: 117 TFDIGRLCGHGLYYPEGAYSKPKIYFLILSDNDVPAEADWQFTYQLLFEDYSFSNSFGAV 176 Query: 223 SVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGIETYSYAMGILS 47 +T P + L D+ PT++ L T A A L + + G+ T S +L Sbjct: 177 PFITLPHKFDRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTAISGGMSTLSSNQALLR 235 Query: 46 HFLGVGGTV 20 F G GT+ Sbjct: 236 FFQGSNGTL 244