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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 227 bits (579), Expect = 4e-58
Identities = 104/182 (57%), Positives = 141/182 (77%)
Frame = -3
Query: 571 LISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDF 392
++SHL P+LG A+W+VFDA+GH+PT+V+TTVELES+RHL PHV ILKD+TT TW+L+F
Sbjct: 54 MVSHLFTSPYLGMAIWYVFDAYGHIPTDVTTTVELESIRHLSPHVHILKDNTTSTWILNF 113
Query: 391 HRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLT 212
HR GQSL+F+G GF+KP +W+I+ASSAQ+ CSADV +V+E Y L +LT
Sbjct: 114 HREGGQSLNFAGPGFMKPKVWIIAASSAQMPCSADVQYVVEGYPQEKVSSEDLLRRKILT 173
Query: 211 YPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGV 32
+ L+DLD++L+P QLA+GT+A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+
Sbjct: 174 LSVESTHLADLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGI 233
Query: 31 GG 26
GG
Sbjct: 234 GG 235
[2][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 224 bits (571), Expect = 4e-57
Identities = 102/183 (55%), Positives = 139/183 (75%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+LISHL+ F G A+W+VFDA+GH+P++++TT+EL+ VR+L PH+ +L++ T+ W +D
Sbjct: 898 KLISHLAPSQFCGVAIWYVFDAYGHIPSDITTTIELDMVRNLSPHIHVLREPTSAVWTID 957
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
FHR+CGQSL+F+G GF P LWVI+A+SAQL SA V + LEA TG+R V+GLAT+ VL
Sbjct: 958 FHRYCGQSLNFAGRGFCNPYLWVIAATSAQLPWSAPVVYRLEALVTGERYVQGLATEGVL 1017
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
YPI P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLG
Sbjct: 1018 EYPISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLG 1077
Query: 34 VGG 26
VGG
Sbjct: 1078 VGG 1080
[3][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 219 bits (558), Expect = 1e-55
Identities = 100/183 (54%), Positives = 136/183 (74%)
Frame = -3
Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389
ISHL+ F G A+W++FDA+G +P++V+T++ELE R LCPHV +L+DS T W +DFH
Sbjct: 56 ISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHVHVLRDSKTSVWTIDFH 115
Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209
+ CGQSL+FSG GF KPTLWVI+AS+AQL SA V + LEA A GD I GLAT S++TY
Sbjct: 116 KICGQSLNFSGRGFSKPTLWVIAASTAQLPWSAQVTYRLEALAQGDEIAHGLATRSIVTY 175
Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29
PI E L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFLG+G
Sbjct: 176 PISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIG 235
Query: 28 GTV 20
GT+
Sbjct: 236 GTI 238
[4][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 219 bits (558), Expect = 1e-55
Identities = 100/183 (54%), Positives = 136/183 (74%)
Frame = -3
Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389
ISHL+ F G A+W++FDA+G +P++V+T++ELE R LCPHV +L+DS T W +DFH
Sbjct: 866 ISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHVHVLRDSKTSVWTIDFH 925
Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209
+ CGQSL+FSG GF KPTLWVI+AS+AQL SA V + LEA A GD I GLAT S++TY
Sbjct: 926 KICGQSLNFSGRGFSKPTLWVIAASTAQLPWSAQVTYRLEALAQGDEIAHGLATRSIVTY 985
Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29
PI E L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFLG+G
Sbjct: 986 PISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIG 1045
Query: 28 GTV 20
GT+
Sbjct: 1046 GTI 1048
[5][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 207 bits (527), Expect = 5e-52
Identities = 97/186 (52%), Positives = 137/186 (73%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
R +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L+D+TT +W++D
Sbjct: 887 RAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTLRDATTSSWIID 946
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
FH+ CGQ+L+FSG GF KPTL+V+ AS QL SA+ F LE YATG+R+VRGL +++ L
Sbjct: 947 FHKMCGQTLNFSGPGFCKPTLYVVVASEFQLARSAETKFRLEFYATGERLVRGL-SENPL 1005
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
TYPI P L DLD+VL +A+GT T +P++LA + + + + YSYA G+LSHFLG
Sbjct: 1006 TYPIKPGHLEDLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLG 1065
Query: 34 VGGTVI 17
VGG +I
Sbjct: 1066 VGGDII 1071
[6][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 204 bits (519), Expect = 4e-51
Identities = 95/186 (51%), Positives = 136/186 (73%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
R +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L+D+TT +W++D
Sbjct: 54 RAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTLRDATTSSWIID 113
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
FH+ CGQ+L+FSG GF KPTL+++ AS QL SA+ F LE YATG+R+VRGL +++ L
Sbjct: 114 FHKMCGQTLNFSGPGFCKPTLYIVVASEFQLARSAETKFRLEFYATGERLVRGL-SENPL 172
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
TYPI L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFLG
Sbjct: 173 TYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLG 232
Query: 34 VGGTVI 17
VGG +I
Sbjct: 233 VGGEII 238
[7][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 204 bits (519), Expect = 4e-51
Identities = 95/186 (51%), Positives = 136/186 (73%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
R +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L+D+TT +W++D
Sbjct: 886 RAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTLRDATTSSWIID 945
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
FH+ CGQ+L+FSG GF KPTL+++ AS QL SA+ F LE YATG+R+VRGL +++ L
Sbjct: 946 FHKMCGQTLNFSGPGFCKPTLYIVVASEFQLARSAETKFRLEFYATGERLVRGL-SENPL 1004
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
TYPI L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFLG
Sbjct: 1005 TYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLG 1064
Query: 34 VGGTVI 17
VGG +I
Sbjct: 1065 VGGEII 1070
[8][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 201 bits (511), Expect = 3e-50
Identities = 96/183 (52%), Positives = 132/183 (72%)
Frame = -3
Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389
ISHL+ F G A+W++FDA+G +P +V+TT ELE R PHVQ+L+D +T TWV+DFH
Sbjct: 56 ISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHVQVLRDVSTSTWVIDFH 115
Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209
+ CGQ+L+FSG G+ P +WVI+AS+ QL S F LE Y G+++VRGLA + L+Y
Sbjct: 116 KICGQTLNFSGQGYCVPKIWVIAASTFQLARSTATKFRLEFYTRGEKLVRGLA-EQPLSY 174
Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29
PI L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFLGVG
Sbjct: 175 PIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVG 234
Query: 28 GTV 20
GT+
Sbjct: 235 GTI 237
[9][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 201 bits (511), Expect = 3e-50
Identities = 96/183 (52%), Positives = 132/183 (72%)
Frame = -3
Query: 568 ISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFH 389
ISHL+ F G A+W++FDA+G +P +V+TT ELE R PHVQ+L+D +T TWV+DFH
Sbjct: 893 ISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHVQVLRDVSTSTWVIDFH 952
Query: 388 RFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTY 209
+ CGQ+L+FSG G+ P +WVI+AS+ QL S F LE Y G+++VRGLA + L+Y
Sbjct: 953 KICGQTLNFSGQGYCVPKIWVIAASTFQLARSTATKFRLEFYTRGEKLVRGLA-EQPLSY 1011
Query: 208 PIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVG 29
PI L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFLGVG
Sbjct: 1012 PIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVG 1071
Query: 28 GTV 20
GT+
Sbjct: 1072 GTI 1074
[10][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 118 bits (296), Expect = 3e-25
Identities = 68/190 (35%), Positives = 103/190 (54%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+LI HL PF G + + + D G++ + T++ E + H+ D ++ +VLD
Sbjct: 54 KLICHLPRAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSDVSSYEFVLD 113
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+ + R LA VL
Sbjct: 114 WHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEELPRTLAPSPVL 173
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
+YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G
Sbjct: 174 SYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQG 232
Query: 34 VGGTVIICHG 5
+GG + HG
Sbjct: 233 IGG---VLHG 239
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 118 bits (296), Expect = 3e-25
Identities = 68/190 (35%), Positives = 103/190 (54%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+LI HL PF G + + + D G++ + T++ E + H+ D ++ +VLD
Sbjct: 66 KLICHLPRAPFAGISFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSDVSSYEFVLD 125
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+ + R LA VL
Sbjct: 126 WHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEELPRTLAPSPVL 185
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
+YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G
Sbjct: 186 SYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQG 244
Query: 34 VGGTVIICHG 5
+GG + HG
Sbjct: 245 IGG---VLHG 251
[12][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 118 bits (296), Expect = 3e-25
Identities = 68/190 (35%), Positives = 103/190 (54%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+LI HL PF G + + + D G++ + T++ E + H+ D ++ +VLD
Sbjct: 737 KLICHLPRAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTTSDVSSYEFVLD 796
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+ + R LA VL
Sbjct: 797 WHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEELPRTLAPSPVL 856
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
+YP L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G
Sbjct: 857 SYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQG 915
Query: 34 VGGTVIICHG 5
+GG + HG
Sbjct: 916 IGG---VLHG 922
[13][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 68.9 bits (167), Expect = 3e-10
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = -3
Query: 205 IGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGG 26
I P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG
Sbjct: 1 ISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGG 60
[14][TOP]
>UniRef100_Q6JX05 P2 protein n=1 Tax=Grapevine deformation virus RepID=Q6JX05_9SECO
Length = 1107
Score = 63.2 bits (152), Expect = 1e-08
Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
Frame = -3
Query: 544 FLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLDFHRFCGQSLS 365
F G FDA+ + T+++TT + PH + T T LD+ CG ++
Sbjct: 663 FTGLTWVMSFDAYNRITTSITTTASPVYTLSV-PHWLLFHAKGTTTCELDYGELCGHAMW 721
Query: 364 FSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVLTYPIGPESLS 185
F T F P L + E +AD FV+E YA + + L + + P S
Sbjct: 722 FESTTFESPKLHFTCITGNNKELAADWEFVVELYAEMEPVSSFLGRPN-FVHTANPTLGS 780
Query: 184 DLDMVLSPTQLALGTSAA---TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTV 20
L P AL T++A AL L +S T YSY +LS+FLG GG +
Sbjct: 781 FKFFTLQPQYYALNTASAIKNVALDLGSTLRSGTNL---VYSYNNALLSYFLGFGGII 835
[15][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 63.2 bits (152), Expect = 1e-08
Identities = 48/185 (25%), Positives = 83/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + +D
Sbjct: 630 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 688
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG +L FS T F P L + E +AD FV+E YA + L + +
Sbjct: 689 YGELCGHALWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 748
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L T++A L +++ + Y+Y +LS++LG
Sbjct: 749 -YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLG 807
Query: 34 VGGTV 20
VGG V
Sbjct: 808 VGGVV 812
[16][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 62.0 bits (149), Expect = 3e-08
Identities = 46/185 (24%), Positives = 83/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + +D
Sbjct: 664 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 722
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ FS T F P L + E +AD FV+E YA + L + +
Sbjct: 723 YGELCGHAMWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 782
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L T++A L +++ + Y+Y +LS++LG
Sbjct: 783 -YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLG 841
Query: 34 VGGTV 20
+GG V
Sbjct: 842 IGGVV 846
[17][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
Length = 1083
Score = 61.6 bits (148), Expect = 4e-08
Identities = 47/185 (25%), Positives = 83/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + +D
Sbjct: 629 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 687
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG +L FS T F P L + E +AD FV+E YA + L + +
Sbjct: 688 YGELCGHALWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 747
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L T++A L +++ + Y+Y +LS++LG
Sbjct: 748 -YSAEAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLG 806
Query: 34 VGGTV 20
+GG V
Sbjct: 807 IGGVV 811
[18][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 61.2 bits (147), Expect = 5e-08
Identities = 46/185 (24%), Positives = 83/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + +D
Sbjct: 67 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 125
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ FS T F P L + E +AD FV+E YA + L + +
Sbjct: 126 YGELCGHAMWFSTTTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPNFI 185
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L T++A L +++ + Y+Y +LS++LG
Sbjct: 186 -YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLG 244
Query: 34 VGGTV 20
+GG V
Sbjct: 245 IGGVV 249
[19][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 60.8 bits (146), Expect = 7e-08
Identities = 46/185 (24%), Positives = 83/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++ST V + PH + + T + +D
Sbjct: 656 KVVVRYPANAFTGITWVMSFDAYDRITSSIST-VASPTYTLSVPHWLLHHKNGTTSCEID 714
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ F+ T F P L + E +AD FV+E YA + L + +
Sbjct: 715 YGTLCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGKPNFI 774
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + LGT++A L +++ + Y+Y +LS +LG
Sbjct: 775 -YSADAFNGSFKFLTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLG 833
Query: 34 VGGTV 20
+GG V
Sbjct: 834 IGGVV 838
[20][TOP]
>UniRef100_A0A9J6 Polyprotein P2 123kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J6_ARMV
Length = 1122
Score = 59.3 bits (142), Expect = 2e-07
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + ++++TT + PH + + T T +D
Sbjct: 669 KVVIRYPANAFTGLTWVMSFDAYNRITSSITTTASPTYTLSV-PHWLLHHKNGTTTCEVD 727
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ + CG ++ FS T F P L + +AD FV+E YA + A DS L
Sbjct: 728 YGKLCGHAMWFSTTTFETPKLHFTCLTGNNKALAADWEFVVELYAEFE------AADSFL 781
Query: 214 TYP-----IGPESLSDLDMVLSPTQLALGTSAA-TALPLTLAEKSVTTSGIETYSYAMGI 53
P G S L P AL T AA ++PL L + +++ + Y++ +
Sbjct: 782 GKPNFVHRNGAFEGSFEYFTLPPLNYALNTIAAYKSIPLNLGQ-TLSDGTSKVYNFNNTL 840
Query: 52 LSHFLGVGG 26
LS++LG+GG
Sbjct: 841 LSYYLGLGG 849
[21][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 58.9 bits (141), Expect = 3e-07
Identities = 44/185 (23%), Positives = 82/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + ++++TT + PH + + T + +D
Sbjct: 51 KVVIRYPANAFTGITWVMSFDAYNRITSSITTTASPAYTLSV-PHWLLHHKNGTTSCDID 109
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ F+ T F P L + E +AD FV+E YA + L +
Sbjct: 110 YGELCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPN-F 168
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L T++A L +++ + Y+Y +LS++LG
Sbjct: 169 VYSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLG 228
Query: 34 VGGTV 20
+GG V
Sbjct: 229 IGGVV 233
[22][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 58.9 bits (141), Expect = 3e-07
Identities = 44/185 (23%), Positives = 82/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + ++++TT + PH + + T + +D
Sbjct: 656 KVVIRYPANAFTGITWVMSFDAYNRITSSITTTASPAYTLSV-PHWLLHHKNGTTSCDID 714
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ F+ T F P L + E +AD FV+E YA + L +
Sbjct: 715 YGELCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKTFLGRPN-F 773
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L T++A L +++ + Y+Y +LS++LG
Sbjct: 774 VYSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLG 833
Query: 34 VGGTV 20
+GG V
Sbjct: 834 IGGVV 838
[23][TOP]
>UniRef100_P24819 Coat protein (Fragment) n=1 Tax=Arabis mosaic virus RepID=POL2_ARMV
Length = 506
Score = 58.2 bits (139), Expect = 5e-07
Identities = 44/185 (23%), Positives = 82/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + LD
Sbjct: 52 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDLD 110
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ F T F P L + E +AD FV+E YA + L + +
Sbjct: 111 YGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 170
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + + S + + P + L ++A L +++ + Y++ +LS++LG
Sbjct: 171 -YSLDAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 229
Query: 34 VGGTV 20
+GG V
Sbjct: 230 IGGIV 234
[24][TOP]
>UniRef100_Q65030 Coat protein n=1 Tax=Arabis mosaic virus (isolate Syrah)
RepID=POL2_ARMVS
Length = 1131
Score = 57.8 bits (138), Expect = 6e-07
Identities = 44/185 (23%), Positives = 82/185 (44%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + +D
Sbjct: 677 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDID 735
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ FS T F P L + E +AD FV+E YA + L + +
Sbjct: 736 YGELCGHAMWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 795
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L ++A L +++ + Y++ +LS++LG
Sbjct: 796 -YSADAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 854
Query: 34 VGGTV 20
+GG V
Sbjct: 855 IGGIV 859
[25][TOP]
>UniRef100_Q65029 Polyprotein P2' 119kDa n=1 Tax=Arabis mosaic virus RepID=Q65029_ARMV
Length = 1084
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/185 (23%), Positives = 81/185 (43%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + LD
Sbjct: 630 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHKNGTTSCDLD 688
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ F T F P L + E +AD FV+E YA + L + +
Sbjct: 689 YGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 748
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L ++A L +++ + Y++ +LS++LG
Sbjct: 749 -YSADAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 807
Query: 34 VGGTV 20
+GG V
Sbjct: 808 IGGIV 812
[26][TOP]
>UniRef100_Q65028 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus
RepID=Q65028_ARMV
Length = 737
Score = 57.0 bits (136), Expect = 1e-06
Identities = 44/185 (23%), Positives = 81/185 (43%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQILKDSTTDTWVLD 395
+++ A F G FDA+ + +++STT + PH + + T + LD
Sbjct: 283 KVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLHHRNGTTSCDLD 341
Query: 394 FHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATDSVL 215
+ CG ++ F T F P L + E +AD FV+E YA + L + +
Sbjct: 342 YGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFI 401
Query: 214 TYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLG 35
Y + S + + P + L ++A L +++ + Y++ +LS++LG
Sbjct: 402 -YSADAFNGSLKYLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLG 460
Query: 34 VGGTV 20
+GG V
Sbjct: 461 IGGVV 465
[27][TOP]
>UniRef100_Q9QRA4 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA4_9SECO
Length = 562
Score = 54.3 bits (129), Expect = 7e-06
Identities = 50/189 (26%), Positives = 73/189 (38%), Gaps = 4/189 (2%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHVQILKDSTTDTW 404
RL + F G ++ DAFG +NV S V+L S+ L V L D TW
Sbjct: 59 RLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEVISLADGPMVTW 116
Query: 403 VLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATD 224
D R CG L +S + KP ++ + S + AD F +
Sbjct: 117 TFDIGRLCGHGLYYSEGAYAKPKIYFLILSDNDVPAEADWQFTYQLLFEDHTFSNSFGAV 176
Query: 223 SVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGIETYSYAMGILS 47
+T P L D+ PT++ L T A A L +V + + T + +L
Sbjct: 177 PFITLPHIFNKL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNMSTLNANQALLR 235
Query: 46 HFLGVGGTV 20
F G GT+
Sbjct: 236 FFQGSNGTL 244
[28][TOP]
>UniRef100_A3FEN3 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=A3FEN3_9SECO
Length = 562
Score = 53.9 bits (128), Expect = 9e-06
Identities = 50/189 (26%), Positives = 72/189 (38%), Gaps = 4/189 (2%)
Frame = -3
Query: 574 RLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHVQILKDSTTDTW 404
RL + F G ++ DAFG NV S V+L S+ L V L D TW
Sbjct: 59 RLRCFIPTNIFCGHSMMCSLDAFGRYDPNVLGASFPVKLASL--LPTEVISLADGPVVTW 116
Query: 403 VLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDRIVRGLATD 224
D R CG L + + KP ++ + S + AD F +
Sbjct: 117 TFDIGRLCGHGLYYPEGAYSKPKIYFLILSDNDVPAEADWQFTYQLLFEDYSFSNSFGAV 176
Query: 223 SVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGIETYSYAMGILS 47
+T P + L D+ PT++ L T A A L + + G+ T S +L
Sbjct: 177 PFITLPHKFDRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTAISGGMSTLSSNQALLR 235
Query: 46 HFLGVGGTV 20
F G GT+
Sbjct: 236 FFQGSNGTL 244