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[1][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 209 bits (532), Expect = 1e-52
Identities = 101/191 (52%), Positives = 133/191 (69%), Gaps = 1/191 (0%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F
Sbjct: 6 LRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFK 65
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
V TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A
Sbjct: 66 VQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDA 125
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEF 540
FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ T+KE
Sbjct: 126 AFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEI 185
Query: 541 QMFVPSRVSNL 573
+ +PSR++N+
Sbjct: 186 ALKIPSRIANI 196
[2][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 209 bits (532), Expect = 1e-52
Identities = 101/191 (52%), Positives = 133/191 (69%), Gaps = 1/191 (0%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F
Sbjct: 1026 LRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFK 1085
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
V TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A
Sbjct: 1086 VQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDA 1145
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEF 540
FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ T+KE
Sbjct: 1146 AFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEI 1205
Query: 541 QMFVPSRVSNL 573
+ +PSR++N+
Sbjct: 1206 ALKIPSRIANI 1216
[3][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 205 bits (521), Expect = 2e-51
Identities = 97/193 (50%), Positives = 135/193 (69%), Gaps = 3/193 (1%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F
Sbjct: 182 LKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFK 241
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
+ TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA
Sbjct: 242 IQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGA 301
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDK 534
+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF +++P K
Sbjct: 302 RFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSK 361
Query: 535 EFQMFVPSRVSNL 573
++ +PSRV N+
Sbjct: 362 ILKLTLPSRVCNI 374
[4][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 205 bits (521), Expect = 2e-51
Identities = 101/191 (52%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L+DLD++L+P QLA+GT+A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF
Sbjct: 181 LADLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFR 240
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
VHSTSS ++ KLR+ +W + + + H + G IQ+ +TANFG GA
Sbjct: 241 VHSTSSCLLTSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGA 299
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP-EGTDKEF 540
+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQRFGWFM+ P + T E
Sbjct: 300 RFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTEL 359
Query: 541 QMFVPSRVSNL 573
+PSR+ N+
Sbjct: 360 DFKIPSRIGNI 370
[5][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 205 bits (521), Expect = 2e-51
Identities = 97/193 (50%), Positives = 135/193 (69%), Gaps = 3/193 (1%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L D++++L P Q+A+G + + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F
Sbjct: 992 LKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFK 1051
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
+ TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA
Sbjct: 1052 IQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGA 1111
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDK 534
+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF +++P K
Sbjct: 1112 RFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSK 1171
Query: 535 EFQMFVPSRVSNL 573
++ +PSRV N+
Sbjct: 1172 ILKLTLPSRVCNI 1184
[6][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 202 bits (515), Expect = 1e-50
Identities = 99/192 (51%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFLGVGGT+ F
Sbjct: 181 LTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFV 240
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
V +TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+
Sbjct: 241 VRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGS 300
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--E 537
F+V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K
Sbjct: 301 AFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASP 360
Query: 538 FQMFVPSRVSNL 573
++ +PSR+ NL
Sbjct: 361 IKVKIPSRIGNL 372
[7][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 202 bits (515), Expect = 1e-50
Identities = 99/192 (51%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L+DL+++L+P Q+A+GT A P++LA K +TSG YSYA G+LSHFLGVGGT+ F
Sbjct: 1018 LTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFV 1077
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
V +TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+
Sbjct: 1078 VRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGS 1137
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--E 537
F+V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K
Sbjct: 1138 AFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASP 1197
Query: 538 FQMFVPSRVSNL 573
++ +PSR+ NL
Sbjct: 1198 IKVKIPSRIGNL 1209
[8][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 197 bits (500), Expect = 6e-49
Identities = 90/192 (46%), Positives = 132/192 (68%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD+VL +A+GT T +P++LA + + + + YSYA G+LSHFLGVGG + FS
Sbjct: 1014 LEDLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFS 1073
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
VHST+S FVSC LR+ +WGT PT + Q+PH D+ L+IQSPF++TANFG +G
Sbjct: 1074 VHSTASTFVSCSLRVALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGT 1133
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKE 537
F++ L +P+APE +E+ F++YI IHGI+++ LC++INY Q F WFM++ T
Sbjct: 1134 AFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGA 1193
Query: 538 FQMFVPSRVSNL 573
+ +P+R++NL
Sbjct: 1194 VSLKIPARMANL 1205
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 194 bits (493), Expect = 4e-48
Identities = 91/192 (47%), Positives = 131/192 (68%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFLGVGG + FS
Sbjct: 181 LEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFS 240
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
VHST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G
Sbjct: 241 VHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGT 300
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKE 537
F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++ T
Sbjct: 301 AFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGM 360
Query: 538 FQMFVPSRVSNL 573
+ +P+R++NL
Sbjct: 361 VSLKIPARMANL 372
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 194 bits (493), Expect = 4e-48
Identities = 91/192 (47%), Positives = 131/192 (68%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD++L +A+GT T +P++LA + + + + YSYA GILSHFLGVGG + FS
Sbjct: 1013 LEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFS 1072
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
VHST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G
Sbjct: 1073 VHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGT 1132
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKE 537
F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++ T
Sbjct: 1133 AFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGM 1192
Query: 538 FQMFVPSRVSNL 573
+ +P+R++NL
Sbjct: 1193 VSLKIPARMANL 1204
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 116 bits (291), Expect = 1e-24
Identities = 60/172 (34%), Positives = 92/172 (53%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG +
Sbjct: 194 LEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGV 252
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
V+ S+ V+ KL I +W + H D G + +L I+ FY+++ +G GA
Sbjct: 253 VYLVGSQLVASKLHISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGA 312
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 519
+ L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P
Sbjct: 313 VIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEP 364
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 115 bits (287), Expect = 3e-24
Identities = 61/172 (35%), Positives = 92/172 (53%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG +
Sbjct: 182 LEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGV 240
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
V+ S+ V+ + RI +W I H D G + +L I+ FY+++ +G GA
Sbjct: 241 VYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGA 300
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 519
V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P
Sbjct: 301 VIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 352
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 115 bits (287), Expect = 3e-24
Identities = 61/172 (35%), Positives = 92/172 (53%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
L DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG +
Sbjct: 865 LEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGV 923
Query: 184 VHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGA 363
V+ S+ V+ + RI +W I H D G + +L I+ FY+++ +G GA
Sbjct: 924 VYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGA 983
Query: 364 QFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 519
V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P
Sbjct: 984 VIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 1035
[14][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 63.9 bits (154), Expect = 8e-09
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Frame = +1
Query: 4 LSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFS 183
+ ++DM + P ++ L T A+T L A ++G E + I+S + G GT
Sbjct: 449 IHEIDMRVGPFRIPLATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGE 508
Query: 184 VHSTSSKFVSCKLRIIIWGT-TP--TIAQTGQMPHCDIVEGGSGE--LRIQSPFYSTANF 348
+ + V C L I + + TP Q + PH +++GG GE LRI +P + A+F
Sbjct: 509 IIKVGTAQVQCDLLIYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAP-EAIASF 566
Query: 349 GSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGW 504
S G ++ + P AP+ V + FEF + IDS + + + F W
Sbjct: 567 HSGGVFLHIVVAAGPTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSW 618
[15][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +1
Query: 19 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 198
+ + P + LGT++A L +++ + Y+Y +LS +LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICS 846
Query: 199 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 345
LR++ W G T Q + P C + E G+ E+ I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVAS 906
Query: 346 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 468
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 SFTSTLNFYAI--SGPIAPSGEIAKMPVVVQIDEI-ALPDL 944
[16][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Frame = +1
Query: 19 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 198
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 795 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 854
Query: 199 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 345
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 855 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQAAS 914
Query: 346 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 468
+ F+ I S P+AP +K ++I+ I + PDL
Sbjct: 915 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQINEI-ALPDL 952
[17][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 124 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 297
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 298 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 441
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[18][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 57.0 bits (136), Expect = 1e-06
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +1
Query: 19 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 198
+ + P + L T++A L +++ + Y+Y +LS++LGVGG V+ VH S
Sbjct: 761 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGVGGVVKGKVHICS 820
Query: 199 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 345
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 821 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 880
Query: 346 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 468
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 881 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 918
[19][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 127 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 300
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 301 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 444
E+ I++ F+S A + ++PLS P+AP+ +EF + I+
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[20][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 56.2 bits (134), Expect = 2e-06
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 6/193 (3%)
Frame = +1
Query: 13 LDMVLSPTQLALGTSAATALPLTLAEKSV-TTSGIET-YSYAMGILSHFLGVGGTVRFSV 186
LD+ P LG S+ + + S SG T YS+ VGG + +V
Sbjct: 226 LDLWRGPFSFELGRSSKRENHIGINFGSARVVSGTNTFYSFPAAYTQLLQSVGGILHGTV 285
Query: 187 HSTSSKFVSCKLRIIIW--GTTPTIAQTGQMPHCDIVEGGSG-ELRIQSPFYSTANFGSE 357
T SK +SC++ +I+ T + Q ++P C I GG +RIQ+PF F +
Sbjct: 286 VQTGSKAISCEMFLILQPDKTAHNLEQALRLPGCRIPTGGGPFSIRIQTPFQREQIFNT- 344
Query: 358 GAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPD-LCKQINYKQRFGWFMVKPEGTDK 534
G Q + + PM + + + +++ + I + D + I F W +
Sbjct: 345 GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQEEGDPPPRPIGNVLLFNWATISEMTNLT 404
Query: 535 EFQMFVPSRVSNL 573
FQ +P+R+S+L
Sbjct: 405 RFQ--IPARLSDL 415
[21][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 56.2 bits (134), Expect = 2e-06
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Frame = +1
Query: 19 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 198
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 198 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 257
Query: 199 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 345
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 258 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQSAS 317
Query: 346 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 468
+ F+ I S P+AP ++ ++I+ I + PDL
Sbjct: 318 SFTSTLNFYAI--SGPIAPSGETARMPVVVQINEI-ALPDL 355
[22][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 55.8 bits (133), Expect = 2e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +1
Query: 19 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 198
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 182 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 241
Query: 199 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 345
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 242 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 301
Query: 346 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 468
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 302 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 339
[23][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 55.8 bits (133), Expect = 2e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +1
Query: 19 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 198
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 846
Query: 199 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 345
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 906
Query: 346 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 468
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 944
[24][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
Length = 1083
Score = 55.5 bits (132), Expect = 3e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +1
Query: 19 MVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 198
+ + P + L T++A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 760 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLGIGGVVKGRVHICS 819
Query: 199 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------AN 345
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 820 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 879
Query: 346 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 468
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 880 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 917
[25][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +1
Query: 124 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 297
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 298 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 444
G E+ I++ +S A + ++PLS P+AP+ +EF + I+
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[26][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 124 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 297
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 298 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 441
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335
[27][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 124 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 297
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 298 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 441
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923
[28][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 124 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 297
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 298 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 441
G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337