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[1][TOP] >UniRef100_B7FJV6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Medicago truncatula RepID=B7FJV6_MEDTR Length = 274 Score = 324 bits (830), Expect = 3e-87 Identities = 165/192 (85%), Positives = 177/192 (92%), Gaps = 1/192 (0%) Frame = +3 Query: 3 AIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTH 182 A PTFTIASHRRIPSQLAFSHRN CTI+SS S YG SS++GLSSKT FRLKLDEK+TH Sbjct: 10 ATPTFTIASHRRIPSQLAFSHRNPCTIASSFHSPYGSSSQIGLSSKTHGFRLKLDEKSTH 69 Query: 183 DVSTTSYGAIEA-SGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 359 DV T SYG IEA +GNPP++PAIMTPGGALDLSSVLFRNRIIFIGQP+N QVAQRVISQL Sbjct: 70 DVGT-SYGVIEAKTGNPPITPAIMTPGGALDLSSVLFRNRIIFIGQPVNSQVAQRVISQL 128 Query: 360 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 539 +TLATID ++DILMYINCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGTLLLAGGE Sbjct: 129 VTLATIDPDADILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGTLLLAGGE 188 Query: 540 KGMRYAMPNARI 575 KGMRY+MPNARI Sbjct: 189 KGMRYSMPNARI 200 [2][TOP] >UniRef100_Q9FY07 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Pisum sativum RepID=Q9FY07_PEA Length = 246 Score = 317 bits (811), Expect = 5e-85 Identities = 160/192 (83%), Positives = 173/192 (90%), Gaps = 1/192 (0%) Frame = +3 Query: 3 AIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTH 182 A PTFTIASH +IPS+LAFSHRN CTI+SSLPS Y HSSK+GLSSK FRLK DEK TH Sbjct: 4 AFPTFTIASHTKIPSKLAFSHRNPCTIASSLPSPYVHSSKIGLSSKAHGFRLKFDEKNTH 63 Query: 183 DVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 359 DVST SYG IEA GNPP+SPA+MTPGGA+DLSSVLFRNRIIFIGQPIN Q+AQRVISQL Sbjct: 64 DVST-SYGVIEAKKGNPPISPAVMTPGGAIDLSSVLFRNRIIFIGQPINAQMAQRVISQL 122 Query: 360 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 539 +TLATID ++DILMYINC GGSTYSVLA+YDCMSWIKPKVGTV FGVAASQ TLLLAGGE Sbjct: 123 VTLATIDPDADILMYINCAGGSTYSVLAVYDCMSWIKPKVGTVCFGVAASQATLLLAGGE 182 Query: 540 KGMRYAMPNARI 575 KGMRY+MPNARI Sbjct: 183 KGMRYSMPNARI 194 [3][TOP] >UniRef100_C6T9Q7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Glycine max RepID=C6T9Q7_SOYBN Length = 273 Score = 305 bits (782), Expect = 1e-81 Identities = 154/191 (80%), Positives = 167/191 (87%) Frame = +3 Query: 3 AIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTH 182 A +FTIAS R PS L FSHRN C+I+SSLP+ YGHSS +GLSSK+ F LKLDEK H Sbjct: 10 ASASFTIASRTRSPSHLVFSHRNPCSIASSLPNPYGHSSGVGLSSKSRGFPLKLDEKNIH 69 Query: 183 DVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 362 ST SYGAIEA GNPP++PA+MTPGG LDLSSVLFRNRIIFIGQP+N QVAQRVISQL+ Sbjct: 70 GAST-SYGAIEAKGNPPITPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQVAQRVISQLV 128 Query: 363 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEK 542 TLATIDE +DIL+YINCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG LLLAGGEK Sbjct: 129 TLATIDENADILVYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEK 188 Query: 543 GMRYAMPNARI 575 GMRYAMPNARI Sbjct: 189 GMRYAMPNARI 199 [4][TOP] >UniRef100_C6TLL0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Glycine max RepID=C6TLL0_SOYBN Length = 273 Score = 290 bits (743), Expect = 4e-77 Identities = 146/191 (76%), Positives = 162/191 (84%) Frame = +3 Query: 3 AIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTH 182 A + IAS R PS L FS RN C+I+SSLP+ YGHSS++GLSSK+ F LK DEK H Sbjct: 10 ASSSLAIASRTRSPSHLVFSQRNPCSIASSLPNPYGHSSEVGLSSKSRGFPLKHDEKNIH 69 Query: 183 DVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 362 ST SYG IEA GNPP++PA+MTPGG LDL+SVLFRNRIIFIGQP+N QVAQRVISQL+ Sbjct: 70 GAST-SYGTIEAKGNPPITPAVMTPGGPLDLTSVLFRNRIIFIGQPVNSQVAQRVISQLV 128 Query: 363 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEK 542 TLATI+E +DIL+YINCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG L LAGGEK Sbjct: 129 TLATINENADILVYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALFLAGGEK 188 Query: 543 GMRYAMPNARI 575 GMRYAMPNARI Sbjct: 189 GMRYAMPNARI 199 [5][TOP] >UniRef100_B9RZA8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus communis RepID=B9RZA8_RICCO Length = 277 Score = 246 bits (628), Expect = 9e-64 Identities = 133/191 (69%), Positives = 148/191 (77%), Gaps = 1/191 (0%) Frame = +3 Query: 6 IPTFTIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTHD 185 +P+ + +S R+ ++ S NS S Y SS GLSS+ S L +DEK +H Sbjct: 22 LPSVSSSSFHRVSARFIVSSLNS--------SPYRDSSIGGLSSRRSGLPLSIDEKNSHR 73 Query: 186 VSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 362 +T SY IEA GNPP+ PA+MTPGG LDL SVLFRNRIIFIGQPIN QVAQRVISQL+ Sbjct: 74 -ATQSYITIEAKKGNPPIMPAVMTPGGPLDLQSVLFRNRIIFIGQPINSQVAQRVISQLV 132 Query: 363 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEK 542 TLATIDE SDILMY+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG LLLAGGEK Sbjct: 133 TLATIDENSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEK 192 Query: 543 GMRYAMPNARI 575 GMRYAMPNARI Sbjct: 193 GMRYAMPNARI 203 [6][TOP] >UniRef100_UPI0001982E3F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982E3F Length = 269 Score = 244 bits (622), Expect = 4e-63 Identities = 131/187 (70%), Positives = 147/187 (78%), Gaps = 1/187 (0%) Frame = +3 Query: 18 TIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTT 197 +I S S FS R S + + S SS +GLSSKTS LK+DE+ H Sbjct: 13 SIVSRNTSSSISFFSPRYS---TKPIVSALSKSSSIGLSSKTSGLSLKVDERGRH-AGNP 68 Query: 198 SYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLAT 374 SYGAIEA GNPPV+P++MTPGG LDLS+VLFR+RIIFIGQPIN VAQRVISQL+TLA Sbjct: 69 SYGAIEAKKGNPPVAPSVMTPGGPLDLSTVLFRSRIIFIGQPINSMVAQRVISQLVTLAA 128 Query: 375 IDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRY 554 IDE++DILMY+NCPGGSTYSVLAIYDCM+WIKPKVGTV FGVAASQG LLLAGGEKGMRY Sbjct: 129 IDEDADILMYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRY 188 Query: 555 AMPNARI 575 AMPNARI Sbjct: 189 AMPNARI 195 [7][TOP] >UniRef100_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=CLPP6_ARATH Length = 271 Score = 241 bits (614), Expect = 4e-62 Identities = 129/191 (67%), Positives = 144/191 (75%), Gaps = 5/191 (2%) Frame = +3 Query: 18 TIASHRRIPSQLAFSHRNSCT----ISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTHD 185 + +S R P +F N I S+L S YG S K GLSS S +K+D K Sbjct: 13 SFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNKAPR- 71 Query: 186 VSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 362 +G IEA GNPPV P++MTPGG LDLSSVLFRNRIIFIGQPIN QVAQRVISQL+ Sbjct: 72 -----FGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLV 126 Query: 363 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEK 542 TLA+ID++SDILMY+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG LLLAGGEK Sbjct: 127 TLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEK 186 Query: 543 GMRYAMPNARI 575 GMRYAMPN R+ Sbjct: 187 GMRYAMPNTRV 197 [8][TOP] >UniRef100_A9PDP3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus trichocarpa RepID=A9PDP3_POPTR Length = 265 Score = 238 bits (608), Expect = 2e-61 Identities = 127/189 (67%), Positives = 146/189 (77%), Gaps = 1/189 (0%) Frame = +3 Query: 12 TFTIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTHDVS 191 +F+I + PS FSHR + +S+ LP Y SS + L++DEK D Sbjct: 13 SFSIFPRAKSPSLSLFSHRRNSVVSA-LPRPYSDSS--------TRLSLRIDEKGFRDAK 63 Query: 192 TTSYGAIEASG-NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTL 368 SY +EA G NPP+ PA+MTPGG +DLSSVLFRNRIIFIGQPIN QVAQRVISQL+TL Sbjct: 64 Q-SYVTVEAKGGNPPIMPAVMTPGGPMDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTL 122 Query: 369 ATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGM 548 ATIDE++DIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG LLL+GGEKGM Sbjct: 123 ATIDEKTDILLYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLSGGEKGM 182 Query: 549 RYAMPNARI 575 RYAMPNARI Sbjct: 183 RYAMPNARI 191 [9][TOP] >UniRef100_A5C6M7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitis vinifera RepID=A5C6M7_VITVI Length = 229 Score = 235 bits (599), Expect = 2e-60 Identities = 120/151 (79%), Positives = 131/151 (86%), Gaps = 1/151 (0%) Frame = +3 Query: 126 GLSSKTSDFRLKLDEKTTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRI 302 GLSSKTS LK+D H SYGAIEA GNPPV+P++MTPGG LDLS+VLFR+RI Sbjct: 6 GLSSKTSGLSLKVDGXGRH-AGNPSYGAIEAKKGNPPVAPSVMTPGGPLDLSTVLFRSRI 64 Query: 303 IFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVG 482 IFIGQPIN VAQRVISQL+TLA IDE++DILMY+NCPGGSTYSVLAIYDCM+WIKPKVG Sbjct: 65 IFIGQPINSMVAQRVISQLVTLAAIDEDADILMYLNCPGGSTYSVLAIYDCMAWIKPKVG 124 Query: 483 TVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 TV FGVAASQG LLLAGGEKGMRYAMPNARI Sbjct: 125 TVCFGVAASQGALLLAGGEKGMRYAMPNARI 155 [10][TOP] >UniRef100_Q42886 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Solanum lycopersicum RepID=Q42886_SOLLC Length = 275 Score = 229 bits (584), Expect = 1e-58 Identities = 122/184 (66%), Positives = 138/184 (75%), Gaps = 2/184 (1%) Frame = +3 Query: 30 HRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGA 209 H+ S L S + S L S Y SS +G SSK LK +E + + +SYG Sbjct: 18 HQTSFSSLLSSRSLRKNVVSVLRSPYSDSSDIGFSSKKLGIPLKFNEYESGAHTNSSYGV 77 Query: 210 IEAS--GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDE 383 I A NPP+ PA+MTP GALDLS+VLFRNRIIFIGQP+N VAQ+VISQL+TLATIDE Sbjct: 78 IVAKEGANPPIMPAVMTPVGALDLSTVLFRNRIIFIGQPVNSAVAQKVISQLVTLATIDE 137 Query: 384 ESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMP 563 +DIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTV FG AASQG LLLAGGEKGMRYAMP Sbjct: 138 NADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGAAASQGALLLAGGEKGMRYAMP 197 Query: 564 NARI 575 NARI Sbjct: 198 NARI 201 [11][TOP] >UniRef100_B9HRQ3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus trichocarpa RepID=B9HRQ3_POPTR Length = 246 Score = 224 bits (570), Expect = 5e-57 Identities = 123/187 (65%), Positives = 136/187 (72%) Frame = +3 Query: 15 FTIASHRRIPSQLAFSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTHDVST 194 F+I+S + PS FSH + +S+ L +SD S+ Sbjct: 14 FSISSRTKPPSLSIFSHGRNSVVSA-------------LPRPSSD-------------SS 47 Query: 195 TSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLAT 374 TS A GNPP+ PA+MTPGG LDLSSVLFRNRIIFIGQPIN QVAQRVISQL+TLAT Sbjct: 48 TSLKA--RGGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLAT 105 Query: 375 IDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRY 554 IDE +DILMY+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG LLLAGGEKGMRY Sbjct: 106 IDENADILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRY 165 Query: 555 AMPNARI 575 AMPNARI Sbjct: 166 AMPNARI 172 [12][TOP] >UniRef100_O49081 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fritillaria agrestis RepID=O49081_FRIAG Length = 267 Score = 223 bits (569), Expect = 6e-57 Identities = 113/153 (73%), Positives = 127/153 (83%), Gaps = 1/153 (0%) Frame = +3 Query: 120 KMGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRN 296 + G+ T+ LKL + + ++ IEA GNPP+ PA+MTPGG LDLSSVLFRN Sbjct: 41 RCGMFGGTNALPLKLTDPASCHSASRYDAVIEAKRGNPPMMPAVMTPGGPLDLSSVLFRN 100 Query: 297 RIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPK 476 RIIFIGQP+N QVAQRVISQL+TLATIDEESDIL+Y+NCPGGSTYS+LAIYDCMSWIKPK Sbjct: 101 RIIFIGQPVNSQVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPK 160 Query: 477 VGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 VGTV FGVAASQG LLLAGGEKGMRY MPNARI Sbjct: 161 VGTVCFGVAASQGALLLAGGEKGMRYTMPNARI 193 [13][TOP] >UniRef100_C7AE92 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Triticum aestivum RepID=C7AE92_WHEAT Length = 266 Score = 203 bits (517), Expect = 7e-51 Identities = 115/191 (60%), Positives = 131/191 (68%), Gaps = 12/191 (6%) Frame = +3 Query: 39 IPSQLAFSHRNSCTISSS-------LPSLYGHSSKM---GLSSKTSDFRLKLDEKTTHDV 188 IP+ LA SC S S L G S+ GL TS +LDE+ H Sbjct: 3 IPTALAVRASPSCQFSHSSSFACSPLSRRNGSSASRRLRGLQVLTSGVSARLDERI-HSQ 61 Query: 189 STTSYGAIEASGN--PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 362 S T I AS N PP+ PAIMTPGG LDL++VL NRIIFIGQ +N QVAQRVISQL+ Sbjct: 62 SYTRKNTIVASENENPPLMPAIMTPGGPLDLATVLLGNRIIFIGQYVNSQVAQRVISQLV 121 Query: 363 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEK 542 TL+ IDEE DIL+Y+NCPGGS YS+LAIYDCMSWI PKVGTV FGV ASQ ++LAGGEK Sbjct: 122 TLSAIDEEGDILIYLNCPGGSLYSILAIYDCMSWISPKVGTVCFGVVASQAAIILAGGEK 181 Query: 543 GMRYAMPNARI 575 GMRYAMPNAR+ Sbjct: 182 GMRYAMPNARV 192 [14][TOP] >UniRef100_Q852G0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oryza sativa Japonica Group RepID=Q852G0_ORYSJ Length = 259 Score = 198 bits (504), Expect = 2e-49 Identities = 102/141 (72%), Positives = 116/141 (82%), Gaps = 2/141 (1%) Frame = +3 Query: 159 KLDEKTTHDVSTTSYGAIEASGN--PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQ 332 KLDE+ H S+ I AS N PP+ PAIMTP GALDL++VL NRIIFIGQ IN Q Sbjct: 46 KLDERI-HCHSSLRKNTIVASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQ 104 Query: 333 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQ 512 VAQRVISQL+TLA +DEE+DIL+Y+NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ Sbjct: 105 VAQRVISQLVTLAAVDEEADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQ 164 Query: 513 GTLLLAGGEKGMRYAMPNARI 575 ++LAGGEKGMRYAMPNAR+ Sbjct: 165 AAIILAGGEKGMRYAMPNARV 185 [15][TOP] >UniRef100_B6TX73 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays RepID=B6TX73_MAIZE Length = 292 Score = 198 bits (504), Expect = 2e-49 Identities = 95/117 (81%), Positives = 106/117 (90%) Frame = +3 Query: 225 NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMY 404 NPP+ PAIMTPGGALDL++VL NRIIFIGQ IN QVAQRVISQL+TLA IDEE+DIL+Y Sbjct: 102 NPPLMPAIMTPGGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAIDEEADILIY 161 Query: 405 INCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ ++LAGGEKGMRYAMPNAR+ Sbjct: 162 LNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAMPNARV 218 [16][TOP] >UniRef100_B4FA93 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays RepID=B4FA93_MAIZE Length = 292 Score = 198 bits (504), Expect = 2e-49 Identities = 95/117 (81%), Positives = 106/117 (90%) Frame = +3 Query: 225 NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMY 404 NPP+ PAIMTPGGALDL++VL NRIIFIGQ IN QVAQRVISQL+TLA IDEE+DIL+Y Sbjct: 102 NPPLMPAIMTPGGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAIDEEADILIY 161 Query: 405 INCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ ++LAGGEKGMRYAMPNAR+ Sbjct: 162 LNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAMPNARV 218 [17][TOP] >UniRef100_C5XV47 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum bicolor RepID=C5XV47_SORBI Length = 276 Score = 197 bits (502), Expect = 4e-49 Identities = 93/117 (79%), Positives = 106/117 (90%) Frame = +3 Query: 225 NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMY 404 NPP+ PAIMTPGGALDL++VL NR+IFIGQ IN QVAQRVISQL+TLA +DEE+DIL+Y Sbjct: 86 NPPLMPAIMTPGGALDLATVLLGNRVIFIGQYINSQVAQRVISQLVTLAAVDEEADILIY 145 Query: 405 INCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ ++LAGGEKGMRYAMPNAR+ Sbjct: 146 LNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAMPNARV 202 [18][TOP] >UniRef100_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Oryza sativa RepID=B9F8Z4_ORYSJ Length = 278 Score = 187 bits (474), Expect = 6e-46 Identities = 102/160 (63%), Positives = 116/160 (72%), Gaps = 21/160 (13%) Frame = +3 Query: 159 KLDEKTTHDVSTTSYGAIEASGN--PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQ 332 KLDE+ H S+ I AS N PP+ PAIMTP GALDL++VL NRIIFIGQ IN Q Sbjct: 46 KLDERI-HCHSSLRKNTIVASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQ 104 Query: 333 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSW---------------- 464 VAQRVISQL+TLA +DEE+DIL+Y+NCPGGS YS+LAIYDCMSW Sbjct: 105 VAQRVISQLVTLAAVDEEADILIYLNCPGGSLYSILAIYDCMSWYILDMSICHAETVLIG 164 Query: 465 ---IKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IKPKVGTV FGV ASQ ++LAGGEKGMRYAMPNAR+ Sbjct: 165 FGLIKPKVGTVCFGVVASQAAIILAGGEKGMRYAMPNARV 204 [19][TOP] >UniRef100_A9TH43 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TH43_PHYPA Length = 201 Score = 179 bits (453), Expect = 2e-43 Identities = 81/118 (68%), Positives = 101/118 (85%) Frame = +3 Query: 222 GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 G PP+ PA++TP G +DLS+++FRNRIIF+G P+N +VAQ V+S+LLTLA I++E +I M Sbjct: 10 GAPPMMPAVLTPSGPVDLSTLMFRNRIIFVGSPVNSEVAQSVVSKLLTLAAINDEEEIKM 69 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YINCPGGSTYS++AIYD M WIKP V TV FG+AASQG LLLAGG+KG R+AMPNARI Sbjct: 70 YINCPGGSTYSIMAIYDAMQWIKPDVSTVCFGIAASQGALLLAGGKKGKRFAMPNARI 127 [20][TOP] >UniRef100_A9SWP4 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SWP4_PHYPA Length = 195 Score = 174 bits (442), Expect = 3e-42 Identities = 80/118 (67%), Positives = 100/118 (84%) Frame = +3 Query: 222 GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 G PP+ PA++TP G +DLS+++FRNRIIF+G +N +VAQ VIS+LLTLA I++E +I M Sbjct: 4 GAPPMMPAVLTPSGPVDLSTLMFRNRIIFVGSSVNSEVAQSVISKLLTLAAINDEEEIKM 63 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YINCPGGSTYS++AI+D M WIKP V TV FG+AASQG LLLAGG+KG R+AMPNARI Sbjct: 64 YINCPGGSTYSIMAIFDAMQWIKPDVSTVCFGIAASQGALLLAGGKKGKRFAMPNARI 121 [21][TOP] >UniRef100_Q7V9L6 ATP-dependent Clp protease proteolytic subunit 3 n=1 Tax=Prochlorococcus marinus RepID=CLPP3_PROMA Length = 216 Score = 115 bits (289), Expect = 2e-24 Identities = 63/142 (44%), Positives = 85/142 (59%), Gaps = 4/142 (2%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 329 ++ K H V G + SG P V P ++ G A D+ S L R RIIF+G +N Sbjct: 2 INTKCIHPVQNKWKGDLPCSG-PGVLPTVIEQSGRGERAFDIYSRLLRERIIFLGTDVND 60 Query: 330 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 509 Q+A +++Q+L L D E DI +YIN PGGS + LAIYD M + P + T+ +G+AAS Sbjct: 61 QIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAAS 120 Query: 510 QGTLLLAGGEKGMRYAMPNARI 575 G LLAGG KG R A+PN+RI Sbjct: 121 MGAFLLAGGSKGKRLALPNSRI 142 [22][TOP] >UniRef100_B1WUD3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece sp. ATCC 51142 RepID=B1WUD3_CYAA5 Length = 229 Score = 115 bits (287), Expect = 3e-24 Identities = 63/136 (46%), Positives = 85/136 (62%), Gaps = 4/136 (2%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 347 H +S+ I A+ V P ++ G A D+ S L R RI+F+G P++ QVA + Sbjct: 9 HTISSKRPSEIYATAKNVV-PMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSI 67 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 ++QLL L D E DI +YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL Sbjct: 68 VAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLL 127 Query: 528 AGGEKGMRYAMPNARI 575 +GG KG R A+P++RI Sbjct: 128 SGGAKGKRMALPSSRI 143 [23][TOP] >UniRef100_A4ISQ2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Geobacillus RepID=CLPP_GEOTN Length = 196 Score = 114 bits (286), Expect = 4e-24 Identities = 57/104 (54%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G PI+ QVA ++SQLL LA D E DI +YIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA G KG R+A+PN+ + Sbjct: 77 IYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEV 120 [24][TOP] >UniRef100_Q4C1E0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C1E0_CROWT Length = 262 Score = 114 bits (285), Expect = 5e-24 Identities = 59/118 (50%), Positives = 78/118 (66%), Gaps = 4/118 (3%) Frame = +3 Query: 234 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 V P ++ G A D+ S L R RI+F+G P++ QVA +++QLL L D E DI + Sbjct: 59 VVPMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 118 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL+GG KG R A+P++RI Sbjct: 119 YINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRI 176 [25][TOP] >UniRef100_Q05UN0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. RS9916 RepID=Q05UN0_9SYNE Length = 229 Score = 114 bits (284), Expect = 7e-24 Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 8/146 (5%) Frame = +3 Query: 162 LDEKTTHDVSTTSYG----AIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQ 317 +D ++H + G A+ S P V P ++ G A D+ S L R RIIF+G Sbjct: 2 IDASSSHPIQNRWTGIRPTAVMPSAAPGVLPTVVEQSGRGERAFDIYSRLLRERIIFLGT 61 Query: 318 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 497 I+ QVA +++QLL L D E DI +YIN PGGS + LAIYD M + P V T+ +G Sbjct: 62 GIDDQVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYG 121 Query: 498 VAASQGTLLLAGGEKGMRYAMPNARI 575 +AAS G LL+GG KG R A+PNARI Sbjct: 122 LAASMGAFLLSGGTKGKRLALPNARI 147 [26][TOP] >UniRef100_A3IU92 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IU92_9CHRO Length = 201 Score = 113 bits (283), Expect = 9e-24 Identities = 56/104 (53%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RI+F+G P++ QVA +++QLL L D E DI +YIN PGGS Y+ LA Sbjct: 12 AFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQIYINSPGGSVYAGLA 71 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I+P V T+ FG+AAS G LL+GG KG R A+P++RI Sbjct: 72 IYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRI 115 [27][TOP] >UniRef100_Q5KVD9 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Geobacillus RepID=CLPP_GEOKA Length = 196 Score = 113 bits (283), Expect = 9e-24 Identities = 56/104 (53%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+F+G PI+ QVA ++SQLL LA D + DI +YIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPGGSITAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA G KG R+A+PN+ I Sbjct: 77 IYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120 [28][TOP] >UniRef100_Q59993 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Synechocystis sp. PCC 6803 RepID=CLPP2_SYNY3 Length = 226 Score = 113 bits (283), Expect = 9e-24 Identities = 60/118 (50%), Positives = 78/118 (66%), Gaps = 4/118 (3%) Frame = +3 Query: 234 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 V P ++ G A D+ S L R RIIF+G P++ QVA +++QLL L D E DI + Sbjct: 23 VVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 82 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL+GG KG R A+P++RI Sbjct: 83 YINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRI 140 [29][TOP] >UniRef100_C0GEZ2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEZ2_9FIRM Length = 193 Score = 113 bits (282), Expect = 1e-23 Identities = 57/104 (54%), Positives = 74/104 (71%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIFIG PI+ VA VI+QLL L + D E DI +Y+N PGGS Y+ LA Sbjct: 17 AYDIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDINIYVNSPGGSVYAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G +LLA G G R+++PN+RI Sbjct: 77 IYDTMQYIKPDVSTICVGLAASMGAVLLAAGADGKRFSLPNSRI 120 [30][TOP] >UniRef100_B5WHP9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia sp. H160 RepID=B5WHP9_9BURK Length = 218 Score = 113 bits (282), Expect = 1e-23 Identities = 61/131 (46%), Positives = 83/131 (63%), Gaps = 4/131 (3%) Frame = +3 Query: 195 TSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 362 +SY ++ A G + P ++ G A D+ S L R RI+F+ P+N Q A +++QLL Sbjct: 3 SSYPSVSALG---LVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLL 59 Query: 363 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEK 542 L + + + DI YIN PGGS Y LAIYD M +IKP+V T+ G AAS GT LL G++ Sbjct: 60 FLESENPDKDICFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQR 119 Query: 543 GMRYAMPNARI 575 G RYA+PNARI Sbjct: 120 GKRYALPNARI 130 [31][TOP] >UniRef100_C7QW49 ATP-dependent Clp protease, proteolytic subunit ClpP n=2 Tax=Cyanothece RepID=C7QW49_CYAP0 Length = 229 Score = 112 bits (281), Expect = 2e-23 Identities = 58/118 (49%), Positives = 76/118 (64%), Gaps = 4/118 (3%) Frame = +3 Query: 234 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 V P ++ G A D+ S L R RI+F+G P++ QVA +++QLL L D E DI + Sbjct: 26 VVPMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 85 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL GG G R A+P++RI Sbjct: 86 YINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAPGKRMALPSSRI 143 [32][TOP] >UniRef100_C6QNT0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QNT0_9BACI Length = 196 Score = 112 bits (281), Expect = 2e-23 Identities = 57/104 (54%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G PI+ QVA ++SQLL LA D E DI +YIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA G KG R+A+PN+ I Sbjct: 77 IYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120 [33][TOP] >UniRef100_A2U459 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polaribacter sp. MED152 RepID=A2U459_9FLAO Length = 219 Score = 112 bits (281), Expect = 2e-23 Identities = 60/132 (45%), Positives = 82/132 (62%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 359 H +S+TSY I +S P + +D+ S L +RIIF+G IN QVA + +QL Sbjct: 15 HGISSTSYTKITSSLTPYIMEERQMNITQMDVFSRLMMDRIIFLGTGINDQVANIIQAQL 74 Query: 360 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 539 L L ++D DI +YIN PGG Y+ L IYD M +IKP V T+ G+AAS G +L+ GE Sbjct: 75 LFLESVDANKDISIYINSPGGGVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLMCAGE 134 Query: 540 KGMRYAMPNARI 575 KG R A+P++RI Sbjct: 135 KGKRSALPHSRI 146 [34][TOP] >UniRef100_C5D7M9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Geobacillus sp. WCH70 RepID=CLPP_GEOSW Length = 196 Score = 112 bits (281), Expect = 2e-23 Identities = 57/104 (54%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G PI+ QVA ++SQLL LA D E DI +YIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA G KG R+A+PN+ I Sbjct: 77 IYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120 [35][TOP] >UniRef100_B0JL95 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microcystis aeruginosa NIES-843 RepID=B0JL95_MICAN Length = 233 Score = 112 bits (280), Expect = 2e-23 Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 4/118 (3%) Frame = +3 Query: 234 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 V P ++ G A D+ S L R RI+F+G P++ QVA +++QLL L D E DI + Sbjct: 31 VLPVVIEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQL 90 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL GG G R ++P++RI Sbjct: 91 YINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRI 148 [36][TOP] >UniRef100_C8WXN6 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WXN6_ALIAC Length = 198 Score = 112 bits (280), Expect = 2e-23 Identities = 56/102 (54%), Positives = 71/102 (69%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RI+ +G PI+ QVA +++QLL LA D E DI MYIN PGGS + +AIY Sbjct: 20 DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGMAIY 79 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M I+P V T+ G+AAS G LLA GEKG RYA+PNA I Sbjct: 80 DTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEI 121 [37][TOP] >UniRef100_B7DTZ4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTZ4_9BACL Length = 198 Score = 112 bits (280), Expect = 2e-23 Identities = 56/102 (54%), Positives = 71/102 (69%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RI+ +G PI+ QVA +++QLL LA D E DI MYIN PGGS + +AIY Sbjct: 20 DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGMAIY 79 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M I+P V T+ G+AAS G LLA GEKG RYA+PNA I Sbjct: 80 DTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEI 121 [38][TOP] >UniRef100_A8YMD7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YMD7_MICAE Length = 233 Score = 112 bits (280), Expect = 2e-23 Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 4/118 (3%) Frame = +3 Query: 234 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 V P ++ G A D+ S L R RI+F+G P++ QVA +++QLL L D E DI + Sbjct: 31 VLPVVIEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQL 90 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL GG G R ++P++RI Sbjct: 91 YINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRI 148 [39][TOP] >UniRef100_B1G293 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia graminis C4D1M RepID=B1G293_9BURK Length = 219 Score = 112 bits (279), Expect = 3e-23 Identities = 61/128 (47%), Positives = 80/128 (62%), Gaps = 9/128 (7%) Frame = +3 Query: 219 SGNPPVS-----PAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 371 S PPV+ P ++ G A D+ S L R RI+F+ P+N Q A +++QLL L Sbjct: 3 SSYPPVTGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLFLE 62 Query: 372 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMR 551 + + + DI YIN PGGS Y LAIYD M +IKP+V T+ G AAS GT LL G++G R Sbjct: 63 SENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLCAGQRGKR 122 Query: 552 YAMPNARI 575 YA+PNARI Sbjct: 123 YALPNARI 130 [40][TOP] >UniRef100_A4BWM1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polaribacter irgensii 23-P RepID=A4BWM1_9FLAO Length = 220 Score = 111 bits (278), Expect = 3e-23 Identities = 59/132 (44%), Positives = 82/132 (62%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 359 H +S+T+Y I +S P + +D+ S L +RIIF+G IN QVA + +QL Sbjct: 15 HGISSTNYTKITSSLTPYIMEERQMNITQMDVFSRLMMDRIIFLGTGINDQVANIIQAQL 74 Query: 360 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 539 L L ++D DI +YIN PGG Y+ L IYD M +IKP V T+ G+AAS G +L+ GE Sbjct: 75 LFLESVDANKDISIYINSPGGGVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLMCAGE 134 Query: 540 KGMRYAMPNARI 575 KG R A+P++RI Sbjct: 135 KGKRSALPHSRI 146 [41][TOP] >UniRef100_B4AWU3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AWU3_9CHRO Length = 228 Score = 111 bits (277), Expect = 5e-23 Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Frame = +3 Query: 219 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 386 S + P ++ G A D+ S L R RI+F+G I+ VA +++QLL L D E Sbjct: 21 SSTQNIVPVVIEQSGMGERAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPE 80 Query: 387 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPN 566 DI +YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL+GG KG R A+P+ Sbjct: 81 KDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPS 140 Query: 567 ARI 575 ARI Sbjct: 141 ARI 143 [42][TOP] >UniRef100_P80244 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus subtilis RepID=CLPP_BACSU Length = 197 Score = 111 bits (277), Expect = 5e-23 Identities = 55/104 (52%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL LA D E +I +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120 [43][TOP] >UniRef100_A7HFV9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=CLPP_ANADF Length = 204 Score = 111 bits (277), Expect = 5e-23 Identities = 56/102 (54%), Positives = 72/102 (70%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RI+F+G PI+ VA VI+QLL L + D + DI +YIN PGGS S LAIY Sbjct: 21 DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGLAIY 80 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M ++KP+V T+ G AAS G LLAGG G R+A+PNARI Sbjct: 81 DTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARI 122 [44][TOP] >UniRef100_B7KBH8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KBH8_CYAP7 Length = 229 Score = 110 bits (276), Expect = 6e-23 Identities = 59/123 (47%), Positives = 78/123 (63%), Gaps = 4/123 (3%) Frame = +3 Query: 219 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 386 SG + P ++ G A D+ S L R RI+F+G I+ VA +++QLL L D E Sbjct: 21 SGLQNILPVVIEQSGMGERAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPE 80 Query: 387 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPN 566 DI +YIN PGGS Y+ LAIYD M I+P V T+ FG+AAS G LL+GG KG R A+P+ Sbjct: 81 KDIQIYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPS 140 Query: 567 ARI 575 AR+ Sbjct: 141 ARM 143 [45][TOP] >UniRef100_B5JG63 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG63_9BACT Length = 182 Score = 110 bits (276), Expect = 6e-23 Identities = 54/103 (52%), Positives = 75/103 (72%) Frame = +3 Query: 267 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 446 +D+ S L ++RI+FIG PIN ++A +I+QLL L D + DI +YIN PGGS S +AI Sbjct: 1 MDIYSRLLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPGGSVTSGMAI 60 Query: 447 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YD M+++ +V T G+AAS GT+LLAGG KG RYA+PN+R+ Sbjct: 61 YDTMNFLSCEVSTWCIGMAASMGTILLAGGTKGKRYALPNSRV 103 [46][TOP] >UniRef100_Q1AVS9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=CLPP_RUBXD Length = 200 Score = 110 bits (276), Expect = 6e-23 Identities = 54/104 (51%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A+D+ S L ++RIIF+G P++ QVA +++QLL L + D E DI +YIN PGGS + LA Sbjct: 23 AMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPGGSVSAGLA 82 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M ++KP + T G+AAS G LLA G KG R+A+PN RI Sbjct: 83 IYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRI 126 [47][TOP] >UniRef100_B8CY74 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Halothermothrix orenii H 168 RepID=CLPP_HALOH Length = 198 Score = 110 bits (276), Expect = 6e-23 Identities = 53/102 (51%), Positives = 72/102 (70%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RI+F+G PIN +++ +I+QLL L D + DI +YIN PGGS + LA+Y Sbjct: 19 DIYSRLLKDRIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPGGSVTAALAMY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D + +IKP V T+ G AAS G LLLA G KG RYA+PNAR+ Sbjct: 79 DTIQYIKPDVATICMGQAASAGALLLASGTKGKRYALPNARV 120 [48][TOP] >UniRef100_B2T6L8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T6L8_BURPP Length = 215 Score = 110 bits (275), Expect = 8e-23 Identities = 55/104 (52%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RI+F+ P+N Q A +++QLL L + + + DI YIN PGGS Y LA Sbjct: 27 AYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLFLESENPDKDICFYINSPGGSVYDGLA 86 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V T+ G AAS GT LL G++G RYA+PNARI Sbjct: 87 IYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQRGKRYALPNARI 130 [49][TOP] >UniRef100_B4AGL6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AGL6_BACPU Length = 198 Score = 110 bits (275), Expect = 8e-23 Identities = 55/104 (52%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120 [50][TOP] >UniRef100_A8FHN9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus pumilus SAFR-032 RepID=CLPP_BACP2 Length = 198 Score = 110 bits (275), Expect = 8e-23 Identities = 55/104 (52%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120 [51][TOP] >UniRef100_A7Z939 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=CLPP_BACA2 Length = 198 Score = 110 bits (275), Expect = 8e-23 Identities = 55/104 (52%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120 [52][TOP] >UniRef100_B4UAX9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Anaeromyxobacter sp. K RepID=CLPP_ANASK Length = 203 Score = 110 bits (275), Expect = 8e-23 Identities = 55/102 (53%), Positives = 72/102 (70%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G P++ VA +I+QLL L + D + DI +YIN PGGS S LAIY Sbjct: 21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGSVTSGLAIY 80 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M ++KP+V T+ G AAS G LLAGG G R+A+PNARI Sbjct: 81 DTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARI 122 [53][TOP] >UniRef100_B8J5G7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Anaeromyxobacter dehalogenans RepID=CLPP_ANAD2 Length = 203 Score = 110 bits (275), Expect = 8e-23 Identities = 55/102 (53%), Positives = 72/102 (70%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G P++ VA +I+QLL L + D + DI +YIN PGGS S LAIY Sbjct: 21 DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGSVTSGLAIY 80 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M ++KP+V T+ G AAS G LLAGG G R+A+PNARI Sbjct: 81 DTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARI 122 [54][TOP] >UniRef100_Q13UT1 ATP-dependent Clp protease proteolytic subunit 1 n=1 Tax=Burkholderia xenovorans LB400 RepID=CLPP1_BURXL Length = 215 Score = 110 bits (275), Expect = 8e-23 Identities = 61/131 (46%), Positives = 81/131 (61%), Gaps = 4/131 (3%) Frame = +3 Query: 195 TSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 362 +SY I G + P ++ G A D+ S L R RI+F+ P+N Q A +++QLL Sbjct: 3 SSYPTITGLG---LVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASVIVAQLL 59 Query: 363 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEK 542 L + + + DI YIN PGGS Y LAIYD M +IKP+V T+ G AAS GT LL G++ Sbjct: 60 FLESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQR 119 Query: 543 GMRYAMPNARI 575 G RYA+PNARI Sbjct: 120 GKRYALPNARI 130 [55][TOP] >UniRef100_B5YE52 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YE52_DICT6 Length = 194 Score = 110 bits (274), Expect = 1e-22 Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RI+F+G IN +VA V++QLL L + D E DI +YIN PGG Sbjct: 10 TPRGERAYDIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDIYLYINSPGGE 69 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + LAIYD M IKPKV TV G AAS +LLA G+KG RYA+P++R+ Sbjct: 70 VSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRV 119 [56][TOP] >UniRef100_B4U6S2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6S2_HYDS0 Length = 205 Score = 110 bits (274), Expect = 1e-22 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RI+ +G PI+ VA +++QLL L D E DI MYIN PGGS Sbjct: 22 TPRGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYINSPGGS 81 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + LAIYD M +IKP V T+ G AAS G +LLA G KG R+A+PNARI Sbjct: 82 VTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGTKGKRFALPNARI 131 [57][TOP] >UniRef100_A5GHT1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. WH 7803 RepID=A5GHT1_SYNPW Length = 229 Score = 110 bits (274), Expect = 1e-22 Identities = 61/146 (41%), Positives = 84/146 (57%), Gaps = 8/146 (5%) Frame = +3 Query: 162 LDEKTTHDVSTTSYG----AIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQ 317 +D +T H + G ++ P V P ++ G A D+ S L R RIIF+G Sbjct: 2 IDARTPHPIQNRWRGIQPMSVHPQAAPGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGT 61 Query: 318 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 497 ++ VA +++Q+L L D E DI +YIN PGGS + LAIYD M + P V T+ +G Sbjct: 62 GVDDAVADALVAQMLFLEAEDPEKDIQVYINSPGGSVTAGLAIYDTMQQVAPDVVTICYG 121 Query: 498 VAASQGTLLLAGGEKGMRYAMPNARI 575 +AAS G LL+GG KG R A+PNARI Sbjct: 122 LAASMGAFLLSGGTKGKRLALPNARI 147 [58][TOP] >UniRef100_A2C5C1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Prochlorococcus marinus str. NATL1A RepID=A2C5C1_PROM1 Length = 218 Score = 110 bits (274), Expect = 1e-22 Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 4/120 (3%) Frame = +3 Query: 228 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 395 P V P ++ G A D+ S L R RIIF+G +N QVA +++Q+L L D E DI Sbjct: 23 PGVLPTVIEQSGQGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDI 82 Query: 396 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +Y+N PGGS + LAIYD M + P V T+ +G+AAS G LL+GG KG R A+PN+RI Sbjct: 83 QLYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRI 142 [59][TOP] >UniRef100_C9KKA6 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KKA6_9FIRM Length = 199 Score = 110 bits (274), Expect = 1e-22 Identities = 57/104 (54%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G PI+ VA V++QLL L + D + DI +YIN PGG + LA Sbjct: 12 AYDIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYINSPGGVVTAGLA 71 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G AAS G LLL G KG RYA+PNARI Sbjct: 72 IYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARI 115 [60][TOP] >UniRef100_C1ZVV0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhodothermus marinus DSM 4252 RepID=C1ZVV0_RHOMR Length = 252 Score = 110 bits (274), Expect = 1e-22 Identities = 56/104 (53%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RI+ IG PIN Q+A V++QLL LA+ D E DI +YIN PGGS S LA Sbjct: 50 AYDIFSRLLKERIVIIGTPINDQIANLVVAQLLWLASEDSERDINIYINSPGGSIDSGLA 109 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YD M ++ P V T+ G+AAS G +LLA G KG R A+PN+RI Sbjct: 110 VYDTMQYVAPPVATICVGLAASMGAVLLAAGVKGKRAALPNSRI 153 [61][TOP] >UniRef100_A4CYI5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CYI5_SYNPV Length = 229 Score = 110 bits (274), Expect = 1e-22 Identities = 62/146 (42%), Positives = 84/146 (57%), Gaps = 8/146 (5%) Frame = +3 Query: 162 LDEKTTHDVSTTSYG----AIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQ 317 +D T+H + G ++ P V P ++ G A D+ S L R RIIF+G Sbjct: 2 IDALTSHPIQNRWRGTQPMSVHPQAAPGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGT 61 Query: 318 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 497 ++ VA +++QLL L D E DI +YIN PGGS + LAIYD M + P V T+ +G Sbjct: 62 GVDDAVADALVAQLLFLEAEDPEKDIQVYINSPGGSVTAGLAIYDTMQQVAPDVVTICYG 121 Query: 498 VAASQGTLLLAGGEKGMRYAMPNARI 575 +AAS G LL+GG KG R A+PNARI Sbjct: 122 LAASMGAFLLSGGTKGKRLALPNARI 147 [62][TOP] >UniRef100_A3TT10 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TT10_9RHOB Length = 210 Score = 110 bits (274), Expect = 1e-22 Identities = 56/104 (53%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++ +++QLL L + DI MYIN PGG S L+ Sbjct: 26 AYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHLEAENPTKDISMYINSPGGVVTSGLS 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKVGT+V G AAS G+LLLAGG GMRYA+PNA I Sbjct: 86 IYDTMQYIKPKVGTLVIGQAASMGSLLLAGGAAGMRYALPNAEI 129 [63][TOP] >UniRef100_B9S1L6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus communis RepID=B9S1L6_RICCO Length = 294 Score = 110 bits (274), Expect = 1e-22 Identities = 68/178 (38%), Positives = 92/178 (51%), Gaps = 7/178 (3%) Frame = +3 Query: 63 HRNSCTISSSL-------PSLYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEAS 221 H +S + SSSL PSL + K +SS + K S S G + Sbjct: 13 HSSSPSPSSSLKPTTAAKPSLVSFNFKSPISSPHN--------KNFPSFSIQSSGTLTPQ 64 Query: 222 GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 P +PA G D +L R RI+F+G I+ VA ISQLL L D DI + Sbjct: 65 FTAPQTPATAMRGAESDAMGLLLRERIVFLGNNIDDFVADATISQLLLLDAQDPTKDIRL 124 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +INCPGGS + +AIYD + ++ V TV G++AS +++L GG KG R+AMPN RI Sbjct: 125 FINCPGGSLSATMAIYDVVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPNTRI 182 [64][TOP] >UniRef100_B7GL34 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Anoxybacillus flavithermus WK1 RepID=CLPP_ANOFW Length = 196 Score = 110 bits (274), Expect = 1e-22 Identities = 55/104 (52%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G PI+ VA ++SQLL LA D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA G KG R+A+PN+ I Sbjct: 77 IYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120 [65][TOP] >UniRef100_Q0IE19 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. CC9311 RepID=Q0IE19_SYNS3 Length = 229 Score = 109 bits (273), Expect = 1e-22 Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 8/146 (5%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEASGNPPVS----PAIMTPGG----ALDLSSVLFRNRIIFIGQ 317 ++ ++ H + G + S + P + P ++ G + D+ S L R RIIF+G Sbjct: 2 INARSHHPIENRWRGTLPVSAHTPHASPGVPTVVEQSGRGERSFDIYSRLLRERIIFLGT 61 Query: 318 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 497 +N QVA +++QLL L D E DI +YIN PGGS + LAIYD M + P V T+ +G Sbjct: 62 DVNDQVADALVAQLLFLEAEDPEKDIQVYINSPGGSITAGLAIYDTMQQVAPDVVTICYG 121 Query: 498 VAASQGTLLLAGGEKGMRYAMPNARI 575 +AAS G LL+GG KG R A+PNARI Sbjct: 122 LAASMGAFLLSGGCKGKRLALPNARI 147 [66][TOP] >UniRef100_C1CY02 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Deinococcus deserti VCD115 RepID=C1CY02_DEIDV Length = 200 Score = 109 bits (273), Expect = 1e-22 Identities = 52/102 (50%), Positives = 72/102 (70%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G PI Q+A +++QLL L + + E +I MYINCPGG Y+ LAIY Sbjct: 19 DIYSRLLKDRIIFVGTPIESQMANTIVAQLLLLDSQNPEQEIQMYINCPGGEVYAGLAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IK V T+ G+A S G++LL G+KG R A+PN+RI Sbjct: 79 DTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRI 120 [67][TOP] >UniRef100_Q2GFT8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia chaffeensis str. Arkansas RepID=CLPP_EHRCR Length = 199 Score = 109 bits (273), Expect = 1e-22 Identities = 56/104 (53%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIFI PI Q+A +++QL+ L + + E +I MYIN PGG + L+ Sbjct: 17 AYDIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEICMYINSPGGVVTAGLS 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G AAS G+LLLA GE GMRYA+PN+RI Sbjct: 77 IYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRI 120 [68][TOP] >UniRef100_Q8KC73 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobaculum tepidum RepID=CLPP_CHLTE Length = 225 Score = 109 bits (273), Expect = 1e-22 Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 4/136 (2%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 347 H GAIE S N + P ++ G A D+ S L R RIIF+G PI+ VA + Sbjct: 10 HHAKKLYSGAIENSINSQLVPMVIETSGRGERAFDIFSRLLRERIIFLGSPIDEHVAGLI 69 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 I+QL+ L + D E DI +YIN PGGS + L IYD M +I+P + TV G+AAS G LL Sbjct: 70 IAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLL 129 Query: 528 AGGEKGMRYAMPNARI 575 A G G R ++P++RI Sbjct: 130 ASGTSGKRASLPHSRI 145 [69][TOP] >UniRef100_Q317Y6 ATP-dependent Clp protease proteolytic subunit 4 n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=CLPP4_PROM9 Length = 219 Score = 109 bits (273), Expect = 1e-22 Identities = 57/104 (54%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G IN QV+ +++QLL L D E DI +YIN PGGS + +A Sbjct: 44 AFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 103 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I P V T+ FGVAAS G LL+GG KG R A+PN+RI Sbjct: 104 IYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 147 [70][TOP] >UniRef100_C6D890 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6D890_PAESJ Length = 195 Score = 109 bits (272), Expect = 2e-22 Identities = 55/102 (53%), Positives = 71/102 (69%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G I+ VA VI+QLL LA D E DI +YIN PGGS + +AIY Sbjct: 19 DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLAADDPEKDIHLYINSPGGSVTAGMAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IKP V T+ G+AAS G+LLL G KG R+A+PNA + Sbjct: 79 DTMQYIKPDVSTICMGMAASMGSLLLTAGAKGKRFALPNAEV 120 [71][TOP] >UniRef100_A9BJY4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BJY4_PETMO Length = 205 Score = 109 bits (272), Expect = 2e-22 Identities = 57/118 (48%), Positives = 76/118 (64%), Gaps = 3/118 (2%) Frame = +3 Query: 231 PVSPAIMTPGG---ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 P+ I T G A D+ S L ++RI+F+G PIN VA +I+QLL L + D + DI + Sbjct: 4 PMPVVIETEGRYERAYDIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFL 63 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YIN PGGS S L IYD M ++KP + T+ G AAS G +LLA G KG RY++P +RI Sbjct: 64 YINSPGGSVTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLPYSRI 121 [72][TOP] >UniRef100_A9BDA0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=A9BDA0_PROM4 Length = 200 Score = 109 bits (272), Expect = 2e-22 Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 4/120 (3%) Frame = +3 Query: 228 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 395 P V P ++ G A D+ S L R RIIF+G +N QVA +++Q+L L D E DI Sbjct: 7 PGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEAEDPEKDI 66 Query: 396 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YIN PGGS + LAIYD M + P V T+ +G+AAS G LL+GG KG R ++PN+RI Sbjct: 67 QLYINSPGGSVTAGLAIYDTMQQVTPDVVTICYGLAASMGAFLLSGGTKGKRVSLPNSRI 126 [73][TOP] >UniRef100_A8G7G1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G7G1_PROM2 Length = 214 Score = 109 bits (272), Expect = 2e-22 Identities = 57/104 (54%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G IN QV+ +++QLL L D E DI +YIN PGGS + +A Sbjct: 39 AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 98 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I P V T+ FGVAAS G LL+GG KG R A+PN+RI Sbjct: 99 IYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142 [74][TOP] >UniRef100_A2BTN7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Prochlorococcus marinus RepID=A2BTN7_PROMS Length = 214 Score = 109 bits (272), Expect = 2e-22 Identities = 57/104 (54%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G IN QV+ +++QLL L D E DI +YIN PGGS + +A Sbjct: 39 AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 98 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I P V T+ FGVAAS G LL+GG KG R A+PN+RI Sbjct: 99 IYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142 [75][TOP] >UniRef100_B9NYZ9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Prochlorococcus marinus str. MIT 9202 RepID=B9NYZ9_PROMA Length = 214 Score = 109 bits (272), Expect = 2e-22 Identities = 57/104 (54%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G IN QV+ +++QLL L D E DI +YIN PGGS + +A Sbjct: 39 AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 98 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I P V T+ FGVAAS G LL+GG KG R A+PN+RI Sbjct: 99 IYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142 [76][TOP] >UniRef100_Q3YSQ3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia canis str. Jake RepID=CLPP_EHRCJ Length = 200 Score = 109 bits (272), Expect = 2e-22 Identities = 57/104 (54%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIFI PI Q+A V++QL+ L + E +I MYIN PGG + L+ Sbjct: 17 AYDIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEICMYINSPGGVVTAGLS 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G AAS G+LLLA GE GMRYA+PN+RI Sbjct: 77 IYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRI 120 [77][TOP] >UniRef100_Q2JIP1 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=CLPP2_SYNJB Length = 200 Score = 109 bits (272), Expect = 2e-22 Identities = 53/104 (50%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R+RIIF+G ++ +A +++Q+L L + D E DI +YIN PGGS Y+ +A Sbjct: 15 AFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMA 74 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I+P V T+ G+AAS G LLAGG KG R A+P+ARI Sbjct: 75 IYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARI 118 [78][TOP] >UniRef100_Q2JV68 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=CLPP2_SYNJA Length = 200 Score = 109 bits (272), Expect = 2e-22 Identities = 53/104 (50%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R+RIIF+G ++ +A +++Q+L L + D E DI +YIN PGGS Y+ +A Sbjct: 15 AFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMA 74 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I+P V T+ G+AAS G LLAGG KG R A+P+ARI Sbjct: 75 IYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARI 118 [79][TOP] >UniRef100_Q7V992 ATP-dependent Clp protease proteolytic subunit 1 n=1 Tax=Prochlorococcus marinus str. MIT 9313 RepID=CLPP1_PROMM Length = 224 Score = 109 bits (272), Expect = 2e-22 Identities = 61/142 (42%), Positives = 82/142 (57%), Gaps = 4/142 (2%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 329 +D H + G I +P + P ++ G A D+ S L R RIIF+G ++ Sbjct: 2 IDSYCYHPIHNRWQG-IRPVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDD 60 Query: 330 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 509 QVA +++Q+L L D E DI +YIN PGGS + LAIYD M + P V T+ +G+AAS Sbjct: 61 QVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120 Query: 510 QGTLLLAGGEKGMRYAMPNARI 575 G LL GG KG R A+PNARI Sbjct: 121 MGAFLLCGGTKGKRLALPNARI 142 [80][TOP] >UniRef100_C0Z6N4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6N4_BREBN Length = 198 Score = 108 bits (271), Expect = 2e-22 Identities = 55/104 (52%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G PIN VA V++QLL L D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA G KG R+A+PN+ + Sbjct: 77 IYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEV 120 [81][TOP] >UniRef100_A2C5R6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Prochlorococcus marinus str. MIT 9303 RepID=A2C5R6_PROM3 Length = 224 Score = 108 bits (271), Expect = 2e-22 Identities = 58/126 (46%), Positives = 77/126 (61%), Gaps = 4/126 (3%) Frame = +3 Query: 210 IEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATI 377 I +P + P ++ G A D+ S L R RIIF+G ++ QVA +++Q+L L Sbjct: 17 IRPVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAE 76 Query: 378 DEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYA 557 D E DI +YIN PGGS + LAIYD M + P V T+ +G+AAS G LL GG KG R A Sbjct: 77 DPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLA 136 Query: 558 MPNARI 575 +PNARI Sbjct: 137 LPNARI 142 [82][TOP] >UniRef100_A9VQ65 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Bacillus RepID=A9VQ65_BACWK Length = 193 Score = 108 bits (271), Expect = 2e-22 Identities = 54/104 (51%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L + D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120 [83][TOP] >UniRef100_Q815J6 ATP-dependent Clp protease proteolytic subunit 2 n=47 Tax=Bacillus cereus group RepID=CLPP2_BACCR Length = 193 Score = 108 bits (271), Expect = 2e-22 Identities = 54/104 (51%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L + D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120 [84][TOP] >UniRef100_A2BZ42 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Prochlorococcus marinus str. MIT 9515 RepID=A2BZ42_PROM5 Length = 204 Score = 108 bits (270), Expect = 3e-22 Identities = 57/104 (54%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G IN QV +++QLL L D + DI +YIN PGGS + LA Sbjct: 27 AFDIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAEDPDKDIQIYINSPGGSVTAGLA 86 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I P V T+ FGVAAS G LL+GG KG R A+PN+RI Sbjct: 87 IYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 130 [85][TOP] >UniRef100_D0CM59 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Synechococcus sp. WH 8109 RepID=D0CM59_9SYNE Length = 224 Score = 108 bits (270), Expect = 3e-22 Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 4/142 (2%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 329 +D ++ H + A+ S P+ P ++ G A D+ S L R RIIF+G ++ Sbjct: 2 IDARSHHPIQNRWRAAMPVSAPGPL-PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDD 60 Query: 330 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 509 VA +++Q+L L D E DI +YIN PGGS + LAIYD M + P V T+ +G+AAS Sbjct: 61 AVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120 Query: 510 QGTLLLAGGEKGMRYAMPNARI 575 G LL+GG KG R A+PNARI Sbjct: 121 MGAFLLSGGTKGKRLALPNARI 142 [86][TOP] >UniRef100_C4RPD5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RPD5_9ACTO Length = 213 Score = 108 bits (270), Expect = 3e-22 Identities = 54/97 (55%), Positives = 67/97 (69%) Frame = +3 Query: 285 LFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSW 464 L + RIIF+G +N QVA R+ +QLL LA D + DI ++IN PGGS YS +AIYD M + Sbjct: 33 LLKERIIFLGSEVNDQVANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYDTMQY 92 Query: 465 IKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I V TV G+AAS G LLL G KG RYA+P+ARI Sbjct: 93 IDNDVSTVAMGMAASMGQLLLCAGTKGKRYALPHARI 129 [87][TOP] >UniRef100_A8W0U2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8W0U2_9BACI Length = 197 Score = 108 bits (270), Expect = 3e-22 Identities = 53/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G PI+ VA +++QLL LA D + DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGTPIDDNVANSIVAQLLFLAADDPDKDISLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G+AAS G LL GE G RYA+PN+ + Sbjct: 77 IYDTMQFIKPKVQTICIGMAASMGAFLLTAGEPGKRYALPNSEV 120 [88][TOP] >UniRef100_Q9RSZ7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Deinococcus radiodurans RepID=CLPP_DEIRA Length = 204 Score = 108 bits (270), Expect = 3e-22 Identities = 51/102 (50%), Positives = 72/102 (70%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G P+ Q+A +++QLL L + + E +I MYINCPGG Y+ LAIY Sbjct: 22 DIYSRLLKDRIIFVGTPVESQMANSIVAQLLLLDSQNPEQEIQMYINCPGGEVYAGLAIY 81 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IK V T+ G+A S G++LL G+KG R A+PN+RI Sbjct: 82 DTMRYIKAPVSTICVGMAMSMGSVLLMAGDKGKRMALPNSRI 123 [89][TOP] >UniRef100_Q1IWD9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=CLPP_DEIGD Length = 200 Score = 108 bits (270), Expect = 3e-22 Identities = 51/102 (50%), Positives = 72/102 (70%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G PI Q+A +++QLL L + + + +I MYINCPGG Y+ LAIY Sbjct: 19 DIYSRLLKDRIIFVGTPIESQMANTIVAQLLLLDSQNPDQEIQMYINCPGGEVYAGLAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IK V T+ G+A S G++LL G+KG R A+PN+RI Sbjct: 79 DTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRLALPNSRI 120 [90][TOP] >UniRef100_C4L5I2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L5I2_EXISA Length = 191 Score = 108 bits (269), Expect = 4e-22 Identities = 54/104 (51%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA +++QLL LA D E DI +YIN PGGS + +A Sbjct: 16 AYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLAAEDPEKDISLYINSPGGSITAGMA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IKP V T+ G+AAS G LL GEKG R+A+PNA I Sbjct: 76 IYDTMNFIKPNVSTICIGMAASMGAFLLQAGEKGKRFALPNAEI 119 [91][TOP] >UniRef100_B8E290 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E290_DICTD Length = 194 Score = 108 bits (269), Expect = 4e-22 Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RI+F+G IN +VA +++QLL L + D E DI +YIN PGG Sbjct: 10 TPRGERAYDIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDIYLYINSPGGE 69 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + LAIYD + IKPKV TV G AAS +LLA G+KG RYA+P++R+ Sbjct: 70 VSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRV 119 [92][TOP] >UniRef100_C7GZR3 Clp protease n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZR3_9FIRM Length = 196 Score = 108 bits (269), Expect = 4e-22 Identities = 55/104 (52%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 + D+ S L R+RIIFIG+PI +A +I+QLL L D DI +YIN PGG S LA Sbjct: 17 SFDIYSRLLRDRIIFIGEPIESNMASSIIAQLLFLEAEDSSKDICIYINSPGGDVTSGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V TV G+AAS +LL GEKG R+A+PN+ I Sbjct: 77 IYDTMQFIKPQVQTVCVGMAASMAAVLLLAGEKGKRFALPNSEI 120 [93][TOP] >UniRef100_C8WW17 ATP-dependent Clp protease, proteolytic subunit ClpP n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW17_ALIAC Length = 192 Score = 108 bits (269), Expect = 4e-22 Identities = 55/102 (53%), Positives = 70/102 (68%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G PI+ VA V++QLL LA D + DI MYIN PGGS + LAIY Sbjct: 19 DIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGSVSAGLAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M IKP V T+ G+AAS +LLA G KG RYA+PN+ + Sbjct: 79 DTMQHIKPDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEV 120 [94][TOP] >UniRef100_A3YWM4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YWM4_9SYNE Length = 213 Score = 108 bits (269), Expect = 4e-22 Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 4/121 (3%) Frame = +3 Query: 225 NPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESD 392 +P V P ++ G A D+ S L R RIIF+G I+ QVA +++QLL L D E D Sbjct: 17 SPGVLPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDQVADSLVAQLLFLEAEDPEKD 76 Query: 393 ILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNAR 572 I +Y+N PGGS + LAIYD M + P V T+ +G+AAS G LL+GG KG R A+P+AR Sbjct: 77 IQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRMALPSAR 136 Query: 573 I 575 I Sbjct: 137 I 137 [95][TOP] >UniRef100_Q1MQ79 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=CLPP_LAWIP Length = 209 Score = 108 bits (269), Expect = 4e-22 Identities = 54/104 (51%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+ +G +N QVA + +QLL L + D E +I +YIN PGGS + LA Sbjct: 22 AYDIYSRLLKDRIVLLGTEVNDQVASLICAQLLFLESQDPEKEIYLYINSPGGSVTAGLA 81 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++I P V TV G AAS G LLLA GEK MRYA+PN+++ Sbjct: 82 IYDTMNYITPNVATVCMGRAASMGALLLAAGEKNMRYALPNSQV 125 [96][TOP] >UniRef100_Q7UZK7 ATP-dependent Clp protease proteolytic subunit 3 n=1 Tax=Prochlorococcus marinus subsp. pastoris str. CCMP1986 RepID=CLPP3_PROMP Length = 215 Score = 108 bits (269), Expect = 4e-22 Identities = 57/104 (54%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G IN QV+ +++QLL L D DI +YIN PGGS + LA Sbjct: 38 AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIYINSPGGSVTAGLA 97 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I P V T+ FGVAAS G LL+GG KG R A+PN+RI Sbjct: 98 IYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 141 [97][TOP] >UniRef100_Q72XW9 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Bacillus cereus ATCC 10987 RepID=CLPP2_BACC1 Length = 193 Score = 108 bits (269), Expect = 4e-22 Identities = 53/104 (50%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L + D + DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPDKDIHLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120 [98][TOP] >UniRef100_Q65EI5 ATP-dependent Clp protease proteolytic subunit 1 n=1 Tax=Bacillus licheniformis ATCC 14580 RepID=CLPP1_BACLD Length = 198 Score = 108 bits (269), Expect = 4e-22 Identities = 54/104 (51%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V T+ G+AAS G LLA GEKG RYA+PN+ + Sbjct: 77 IYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEV 120 [99][TOP] >UniRef100_B2V7P4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V7P4_SULSY Length = 201 Score = 107 bits (268), Expect = 5e-22 Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RII +G PI+ +A V++QLL L + D + DI MYIN PGG Sbjct: 16 TPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGV 75 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + LAIYD M++IKP V T+ G AAS G LL+ G KG RY++PNARI Sbjct: 76 VTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARI 125 [100][TOP] >UniRef100_B1XN46 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XN46_SYNP2 Length = 197 Score = 107 bits (268), Expect = 5e-22 Identities = 56/118 (47%), Positives = 76/118 (64%), Gaps = 4/118 (3%) Frame = +3 Query: 234 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 401 V P ++ G A D+ S L R RI+F+G I+ VA V++QLL L D + DI + Sbjct: 5 VVPMVVEQSGMGERAFDIYSRLLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQL 64 Query: 402 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YIN PGGS Y+ +AIYD M I+P V T+ +G+AAS G LL+GG KG R A+P++RI Sbjct: 65 YINSPGGSVYAGMAIYDTMQQIRPNVVTICYGIAASMGAFLLSGGTKGKRMALPSSRI 122 [101][TOP] >UniRef100_D0CW95 Clp protease n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CW95_9RHOB Length = 210 Score = 107 bits (268), Expect = 5e-22 Identities = 54/104 (51%), Positives = 74/104 (71%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RI+FI PI+ ++ +++QLL L + + +I +YIN PGG S LA Sbjct: 26 AYDIFSRLLKERIVFINGPIHDGMSHLIVAQLLHLEAENPKKEISIYINSPGGVVTSGLA 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPK T+V G AAS G++LLAGGEKGMR+A+PN+RI Sbjct: 86 IYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFALPNSRI 129 [102][TOP] >UniRef100_C4FHW5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FHW5_9AQUI Length = 201 Score = 107 bits (268), Expect = 5e-22 Identities = 57/110 (51%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RII +G PI+ +A V++QLL L + D + DI MYIN PGG Sbjct: 16 TPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGV 75 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + LAIYD M++IKP V T+ G AAS G LL+ G KG RY++PNARI Sbjct: 76 VTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARI 125 [103][TOP] >UniRef100_Q5HBX5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia ruminantium str. Welgevonden RepID=CLPP_EHRRW Length = 198 Score = 107 bits (268), Expect = 5e-22 Identities = 55/104 (52%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIFI PI Q+A V++QL+ L + E DI MYIN PGG + L+ Sbjct: 17 AYDIYSRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDISMYINSPGGVVTAGLS 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M ++KP++ T+ G AAS G+LLLA GEKGMR A+PN+RI Sbjct: 77 IYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRI 120 [104][TOP] >UniRef100_Q81X63 ATP-dependent Clp protease proteolytic subunit 2 n=10 Tax=Bacillus anthracis RepID=CLPP2_BACAN Length = 193 Score = 107 bits (268), Expect = 5e-22 Identities = 54/102 (52%), Positives = 71/102 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L + D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNA 569 IYD M +IKP+V T+ G+AAS G LLA GEKG RYA+PN+ Sbjct: 77 IYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNS 118 [105][TOP] >UniRef100_Q8YQX8 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Nostoc sp. PCC 7120 RepID=CLPP2_ANASP Length = 232 Score = 107 bits (268), Expect = 5e-22 Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 6/144 (4%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEA--SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPI 323 + + H +++ S + + +G + P ++ G A D+ S L R RIIF+G PI Sbjct: 3 VSQSANHSINSLSRFGMSSHLNGIGNIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPI 62 Query: 324 NGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVA 503 + VA +++QLL L D E DI +YIN PGGS Y+ +AIYD + I+P V T+ FG+A Sbjct: 63 DDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLA 122 Query: 504 ASQGTLLLAGGEKGMRYAMPNARI 575 AS G LL G KG R ++P++RI Sbjct: 123 ASMGAFLLTAGTKGKRMSLPDSRI 146 [106][TOP] >UniRef100_B3QL40 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QL40_CHLP8 Length = 225 Score = 107 bits (267), Expect = 7e-22 Identities = 59/136 (43%), Positives = 81/136 (59%), Gaps = 4/136 (2%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 347 H GAIE S N + P ++ G A D+ S L R RIIF+G PI+ VA + Sbjct: 10 HHAKKLYSGAIENSINNQLVPMVIETSGRGERAFDIFSRLLRERIIFLGSPIDEHVAGLI 69 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 ++QL+ L + D E DI +Y+N PGGS + L IYD M +I+P + TV G+AAS G LL Sbjct: 70 MAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLL 129 Query: 528 AGGEKGMRYAMPNARI 575 A G G R ++P++RI Sbjct: 130 ASGTAGKRASLPHSRI 145 [107][TOP] >UniRef100_B2JDW0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia phymatum STM815 RepID=B2JDW0_BURP8 Length = 217 Score = 107 bits (267), Expect = 7e-22 Identities = 55/104 (52%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RI+F+ P+N Q A +++QLL L + + + DI YIN PGGS Y LA Sbjct: 29 AYDIYSRLLRERIVFLVGPVNDQSASLIVAQLLFLESENPDKDISFYINSPGGSVYDGLA 88 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M +IKP V T+ G AAS GT LLA G G RYA+PNARI Sbjct: 89 IFDTMQFIKPDVSTLCTGFAASMGTFLLAAGAPGKRYALPNARI 132 [108][TOP] >UniRef100_A7GUT3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus cytotoxicus NVH 391-98 RepID=A7GUT3_BACCN Length = 193 Score = 107 bits (267), Expect = 7e-22 Identities = 53/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L + D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA GEKG R+A+PN+ + Sbjct: 77 IYDTMQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120 [109][TOP] >UniRef100_C2U534 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Bacillus cereus group RepID=C2U534_BACCE Length = 193 Score = 107 bits (267), Expect = 7e-22 Identities = 53/104 (50%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L + D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V T+ G+AAS G LLA GEKG R+A+PN+ + Sbjct: 77 IYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120 [110][TOP] >UniRef100_C2QJL4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus cereus R309803 RepID=C2QJL4_BACCE Length = 193 Score = 107 bits (267), Expect = 7e-22 Identities = 53/104 (50%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L + D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP+V T+ G+AAS G LLA GEKG R+A+PN+ + Sbjct: 77 IYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120 [111][TOP] >UniRef100_A6GN68 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Limnobacter sp. MED105 RepID=A6GN68_9BURK Length = 215 Score = 107 bits (267), Expect = 7e-22 Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 3/127 (2%) Frame = +3 Query: 204 GAIEASGNPPVSPAIMTPGG---ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLAT 374 GA+E GN V I G A D+ S L + R+IF+ PIN Q+A +++Q+L L + Sbjct: 9 GALETQGNMYVPMVIEQSGRGERAYDIYSRLLKERVIFLVGPINDQMANVIVAQMLFLES 68 Query: 375 IDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRY 554 + + DI +YIN PGGS + +AIYD M +IKP V T+ G+AAS G LL+ G KG R+ Sbjct: 69 ENPDKDIALYINSPGGSVSAGMAIYDTMQFIKPDVSTLCTGLAASMGAFLLSSGTKGKRF 128 Query: 555 AMPNARI 575 ++PN+RI Sbjct: 129 SLPNSRI 135 [112][TOP] >UniRef100_A0ZER6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZER6_NODSP Length = 210 Score = 107 bits (267), Expect = 7e-22 Identities = 54/104 (51%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G PI+ VA +++QLL L D E DI +YIN PGGS Y+ +A Sbjct: 21 AFDIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQIYINSPGGSVYAGMA 80 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I+P V T+ FG+AAS G LLA G G R ++P++RI Sbjct: 81 IYDTMQQIRPDVVTICFGLAASMGAFLLAAGSAGKRMSLPDSRI 124 [113][TOP] >UniRef100_Q46ID4 ATP-dependent Clp protease proteolytic subunit 3 n=1 Tax=Prochlorococcus marinus str. NATL2A RepID=CLPP3_PROMT Length = 194 Score = 107 bits (267), Expect = 7e-22 Identities = 53/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G +N QVA +++Q+L L D E DI +Y+N PGGS + LA Sbjct: 15 AFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLA 74 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M + P V T+ +G+AAS G LL+GG KG R A+PN+RI Sbjct: 75 IYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRI 118 [114][TOP] >UniRef100_C1DTD6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1 RepID=C1DTD6_SULAA Length = 202 Score = 107 bits (266), Expect = 9e-22 Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RII +G PI+ VA +++QLL L D E DI MYIN PGG Sbjct: 16 TPRGERAYDIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPGGV 75 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + AIYD M++IKP V T+ G AAS G LL+ G KG RY++PNARI Sbjct: 76 VTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLPNARI 125 [115][TOP] >UniRef100_B9KAT3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9KAT3_THENN Length = 200 Score = 107 bits (266), Expect = 9e-22 Identities = 55/104 (52%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+F+G PI+ VA VI+QLL L D + D+ +YIN PGGS + LA Sbjct: 24 AYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLA 83 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IK V T+ G AAS +LLA G KG RYA+PNARI Sbjct: 84 IYDTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPNARI 127 [116][TOP] >UniRef100_B2IT90 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IT90_NOSP7 Length = 232 Score = 107 bits (266), Expect = 9e-22 Identities = 59/144 (40%), Positives = 85/144 (59%), Gaps = 6/144 (4%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEASGNPP--VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPI 323 + + + +S S I + N P + P ++ G A D+ S L R RIIF+G PI Sbjct: 3 VSQSGNYPISNQSRININSQLNSPSNIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPI 62 Query: 324 NGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVA 503 + VA +++QLL L + D E DI MY+N PGGS Y+ +AIYD + I+P V T+ FG+A Sbjct: 63 DDAVANSIVAQLLFLDSEDSEKDIQMYVNSPGGSVYAGMAIYDTIQQIRPDVVTICFGLA 122 Query: 504 ASQGTLLLAGGEKGMRYAMPNARI 575 AS G LL G G R ++P++RI Sbjct: 123 ASMGAFLLTAGAAGKRMSLPDSRI 146 [117][TOP] >UniRef100_A5GQ10 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. RCC307 RepID=A5GQ10_SYNR3 Length = 207 Score = 107 bits (266), Expect = 9e-22 Identities = 58/134 (43%), Positives = 80/134 (59%), Gaps = 4/134 (2%) Frame = +3 Query: 186 VSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVIS 353 + S+ I +S + P ++ G A D+ S L R RIIF+G I+ +A V++ Sbjct: 2 IEAISHHPIHSSWQNTLVPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDAIADAVVA 61 Query: 354 QLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAG 533 QLL L D E +I +Y+N PGGS + LAIYD M + P V T+ +G+AAS G LL+G Sbjct: 62 QLLYLEAEDPEKEIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSG 121 Query: 534 GEKGMRYAMPNARI 575 G KG R A+PNARI Sbjct: 122 GTKGKRLALPNARI 135 [118][TOP] >UniRef100_A3JUE0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JUE0_9RHOB Length = 209 Score = 107 bits (266), Expect = 9e-22 Identities = 53/102 (51%), Positives = 71/102 (69%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L + RIIF+ P++ ++A +++QLL L + +I MYIN PGG S L+IY Sbjct: 28 DIFSRLLKERIIFVSGPVHDEMATTIVAQLLFLEADNPTKEIAMYINSPGGVVTSGLSIY 87 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IKPKV TV G AAS G+LLLA GE GMRY++PN+RI Sbjct: 88 DTMQYIKPKVSTVCIGQAASMGSLLLAAGEPGMRYSLPNSRI 129 [119][TOP] >UniRef100_B8BRT2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRT2_THAPS Length = 260 Score = 107 bits (266), Expect = 9e-22 Identities = 56/116 (48%), Positives = 73/116 (62%) Frame = +3 Query: 228 PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYI 407 PP P + G LD+ S L ++RI+ +G +N +VA +++QLL LA D E DI +YI Sbjct: 58 PPTLPTVEGGSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYI 117 Query: 408 NCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 N PGGS + LAIYD M +I V TV FG+AAS G LL G G R ++PNARI Sbjct: 118 NSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAPGKRKSLPNARI 173 [120][TOP] >UniRef100_A8LJA8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=CLPP_DINSH Length = 208 Score = 107 bits (266), Expect = 9e-22 Identities = 53/104 (50%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RI+F+ P++ ++Q V++QLL L + +I MYIN PGG S L+ Sbjct: 25 AYDIFSRLLKERIVFVNGPVHDGMSQLVVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 84 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL GEKGMR+++PN+RI Sbjct: 85 IYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEKGMRFSLPNSRI 128 [121][TOP] >UniRef100_B8FA62 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=CLPP_DESAA Length = 201 Score = 107 bits (266), Expect = 9e-22 Identities = 54/102 (52%), Positives = 71/102 (69%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G +N VA +I+QLL L + D E DI YIN PGGS + +AIY Sbjct: 19 DIYSRLLKDRIIFLGTEVNDVVANSIIAQLLFLESDDPEKDINFYINSPGGSVTAGMAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M++IKP++ TV G AAS G +LLA G G RY++PNARI Sbjct: 79 DTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARI 120 [122][TOP] >UniRef100_A5FRE5 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Dehalococcoides RepID=CLPP_DEHSB Length = 200 Score = 107 bits (266), Expect = 9e-22 Identities = 56/104 (53%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S+L + RIIF+G IN QVA VI+QLL L D + DI +YI+ PGG + LA Sbjct: 21 AFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLA 80 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YD M I+PKV T+ GVAAS T+LL G KG RYA+PNA I Sbjct: 81 MYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATI 124 [123][TOP] >UniRef100_Q3Z8J8 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Dehalococcoides RepID=CLPP_DEHE1 Length = 200 Score = 107 bits (266), Expect = 9e-22 Identities = 56/104 (53%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S+L + RIIF+G IN QVA VI+QLL L D + DI +YI+ PGG + LA Sbjct: 21 AFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLA 80 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YD M I+PKV T+ GVAAS T+LL G KG RYA+PNA I Sbjct: 81 MYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATI 124 [124][TOP] >UniRef100_C0QQZ7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Persephonella marina EX-H1 RepID=C0QQZ7_PERMH Length = 202 Score = 106 bits (265), Expect = 1e-21 Identities = 58/110 (52%), Positives = 73/110 (66%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RII +G PI+ +A +I+QLL L + D E DI MYIN PGG Sbjct: 20 TPRGERAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYMYINSPGGV 79 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 S LAIYD M +IKP V T+ G AAS G LL+ G KG RYA+P++RI Sbjct: 80 VTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGKRYALPSSRI 129 [125][TOP] >UniRef100_C7DD00 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DD00_9RHOB Length = 209 Score = 106 bits (265), Expect = 1e-21 Identities = 52/104 (50%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++Q +++QLL L + +I MYIN PGG S L+ Sbjct: 25 AYDIFSRLLKERIIFLNGPVHDGMSQLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 84 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL GEKGMR+++PN+R+ Sbjct: 85 IYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRV 128 [126][TOP] >UniRef100_A5IJ91 ATP-dependent Clp protease proteolytic subunit n=5 Tax=Thermotogaceae RepID=CLPP_THEP1 Length = 203 Score = 106 bits (265), Expect = 1e-21 Identities = 55/104 (52%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+F+G PI+ VA VI+QLL L D + D+ +YIN PGGS + LA Sbjct: 26 AYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLA 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IK V T+ G AAS +LLA G KG RYA+PNARI Sbjct: 86 IYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARI 129 [127][TOP] >UniRef100_Q5FFG7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia ruminantium str. Gardel RepID=CLPP_EHRRG Length = 198 Score = 106 bits (265), Expect = 1e-21 Identities = 54/104 (51%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ + L + RIIFI PI Q+A V++QL+ L + E DI MYIN PGG + L+ Sbjct: 17 AYDIYTRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDISMYINSPGGVVTAGLS 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M ++KP++ T+ G AAS G+LLLA GEKGMR A+PN+RI Sbjct: 77 IYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRI 120 [128][TOP] >UniRef100_Q3M726 ATP-dependent Clp protease proteolytic subunit 3 n=1 Tax=Anabaena variabilis ATCC 29413 RepID=CLPP3_ANAVT Length = 214 Score = 106 bits (265), Expect = 1e-21 Identities = 53/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G PI+ VA +++QLL L D E DI +YIN PGGS Y+ +A Sbjct: 25 AFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMA 84 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD + I+P V T+ FG+AAS G LL G KG R ++P++RI Sbjct: 85 IYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRI 128 [129][TOP] >UniRef100_P54415 ATP-dependent Clp protease proteolytic subunit 1 n=2 Tax=Synechococcus elongatus RepID=CLPP1_SYNE7 Length = 197 Score = 106 bits (265), Expect = 1e-21 Identities = 53/104 (50%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G+P+ VA R+++QLL L D E DI +YIN PGGS Y L Sbjct: 15 AFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLG 74 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M+ I+P V TV G+AAS G LLA G KG R ++ ++RI Sbjct: 75 IFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRI 118 [130][TOP] >UniRef100_UPI0001874468 Clp protease n=1 Tax=Capnocytophaga sputigena ATCC 33612 RepID=UPI0001874468 Length = 219 Score = 106 bits (264), Expect = 1e-21 Identities = 59/151 (39%), Positives = 85/151 (56%) Frame = +3 Query: 123 MGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRI 302 M LS + + +K H V++ Y I S P + +D+ S L +RI Sbjct: 1 MNLSDEFKKYAIK-----QHGVNSLYYDKIVGSMTPYIMEERQLNVAQMDVFSRLMMDRI 55 Query: 303 IFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVG 482 IF+G +N QVA V +QLL L ++D DI +YIN PGGS Y+ L +YD M +IKP V Sbjct: 56 IFLGTDVNDQVANIVTAQLLFLESVDSAKDIQIYINSPGGSVYAGLGMYDTMQFIKPDVA 115 Query: 483 TVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 T+ G+AAS +LL G +G R A+P++R+ Sbjct: 116 TICTGIAASMAAVLLCAGAEGKRSALPHSRV 146 [131][TOP] >UniRef100_A4XAI1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Salinispora tropica CNB-440 RepID=A4XAI1_SALTO Length = 213 Score = 106 bits (264), Expect = 1e-21 Identities = 57/123 (46%), Positives = 75/123 (60%), Gaps = 7/123 (5%) Frame = +3 Query: 228 PPVSPAIMTPGGALDLSSV-------LFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 386 PP P + G ++ ++ L + RIIF+G + QVA R+ +QLL LA D + Sbjct: 7 PPTPPRAIDARGGDNIGNLDDSVYNRLLKERIIFLGSEVTDQVANRICAQLLLLAAEDPD 66 Query: 387 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPN 566 DI ++IN PGGS YS +AIYD M +I V TV G+AAS G LLL G KG RYA+P+ Sbjct: 67 RDINLWINSPGGSVYSGMAIYDTMQFIDNDVSTVAMGMAASMGQLLLCAGTKGKRYALPH 126 Query: 567 ARI 575 ARI Sbjct: 127 ARI 129 [132][TOP] >UniRef100_A4SXD6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SXD6_POLSQ Length = 209 Score = 106 bits (264), Expect = 1e-21 Identities = 59/125 (47%), Positives = 77/125 (61%), Gaps = 3/125 (2%) Frame = +3 Query: 210 IEASGNPPVSPAIMTPGG---ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATID 380 +E G V I T G A D+ S L R R++F+ +N Q A VI+QLL L + + Sbjct: 11 LEPKGLGLVPMVIETSGRGERAYDIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESEN 70 Query: 381 EESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAM 560 + DI +YIN PGGS + LAIYD M +IKP V T+ G+AAS G LL GEKG RYA+ Sbjct: 71 PDKDISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYAL 130 Query: 561 PNARI 575 PN+R+ Sbjct: 131 PNSRV 135 [133][TOP] >UniRef100_Q79CM2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus elongatus PCC 7942 RepID=Q79CM2_SYNE7 Length = 302 Score = 106 bits (264), Expect = 1e-21 Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Frame = +3 Query: 219 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 386 +G+ + P ++ G A D+ S L R RI+F+G ++ VA +++QLL L D E Sbjct: 94 AGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPE 153 Query: 387 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPN 566 DI +YIN PGGS + +AIYD M + P V T+ FG+AAS G LL+GG +G R A+P+ Sbjct: 154 KDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPS 213 Query: 567 ARI 575 ARI Sbjct: 214 ARI 216 [134][TOP] >UniRef100_Q1VUI3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VUI3_9FLAO Length = 224 Score = 106 bits (264), Expect = 1e-21 Identities = 61/141 (43%), Positives = 82/141 (58%), Gaps = 9/141 (6%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPG---------GALDLSSVLFRNRIIFIGQPINGQ 332 H V+ Y I S ++P+ MTP A+D+ S L +RIIF+G PIN Q Sbjct: 15 HGVNANYYDKIITS----MTPSAMTPNIIEERQMNAVAMDVFSRLMMDRIIFLGLPINDQ 70 Query: 333 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQ 512 VA + +QLL L + D DI +YIN PGGS Y+ L IYD M +IKP V T+ G+AAS Sbjct: 71 VANIIQAQLLFLESTDSSKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATINTGIAASM 130 Query: 513 GTLLLAGGEKGMRYAMPNARI 575 G +LL G G R +P++R+ Sbjct: 131 GAVLLCAGTAGKRSGLPHSRV 151 [135][TOP] >UniRef100_C7XT97 ATP-dependent Clp protease, proteolytic subunit ClpP n=2 Tax=Fusobacterium RepID=C7XT97_9FUSO Length = 193 Score = 106 bits (264), Expect = 1e-21 Identities = 56/104 (53%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G I+ VA +I+QLL L D E DI+MYIN PGGS +A Sbjct: 16 AYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTDGMA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IKP V TV G AAS G LLA G KG R+A+ N+RI Sbjct: 76 IYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRI 119 [136][TOP] >UniRef100_C3X055 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Fusobacterium RepID=C3X055_9FUSO Length = 193 Score = 106 bits (264), Expect = 1e-21 Identities = 56/104 (53%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G I+ VA +I+QLL L D E DI+MYIN PGGS +A Sbjct: 16 AYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTDGMA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IKP V TV G AAS G LLA G KG R+A+ N+RI Sbjct: 76 IYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRI 119 [137][TOP] >UniRef100_C0P421 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays RepID=C0P421_MAIZE Length = 310 Score = 106 bits (264), Expect = 1e-21 Identities = 52/103 (50%), Positives = 68/103 (66%) Frame = +3 Query: 267 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 446 LD +++L R RI+F+G P++ A +ISQLL L D+ DI ++IN PGGS + + + Sbjct: 72 LDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMGV 131 Query: 447 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YD M + K V TV FG+AAS G LLA G KG RY MPNARI Sbjct: 132 YDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARI 174 [138][TOP] >UniRef100_A6SY74 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Janthinobacterium sp. Marseille RepID=CLPP_JANMA Length = 210 Score = 106 bits (264), Expect = 1e-21 Identities = 52/104 (50%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P+N Q+A +++QLL L + + + DI +YIN PGGS + +A Sbjct: 33 AYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGMA 92 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA GEKG R+++PN+RI Sbjct: 93 IYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRI 136 [139][TOP] >UniRef100_Q8RHJ8 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Fusobacterium RepID=CLPP_FUSNN Length = 193 Score = 106 bits (264), Expect = 1e-21 Identities = 56/104 (53%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G I+ VA +I+QLL L D E DI+MYIN PGGS +A Sbjct: 16 AYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTDGMA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IKP V TV G AAS G LLA G KG R+A+ N+RI Sbjct: 76 IYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRI 119 [140][TOP] >UniRef100_O34125 ATP-dependent Clp protease proteolytic subunit 2 n=2 Tax=Synechococcus elongatus RepID=CLPP2_SYNE7 Length = 240 Score = 106 bits (264), Expect = 1e-21 Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 4/123 (3%) Frame = +3 Query: 219 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 386 +G+ + P ++ G A D+ S L R RI+F+G ++ VA +++QLL L D E Sbjct: 32 AGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPE 91 Query: 387 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPN 566 DI +YIN PGGS + +AIYD M + P V T+ FG+AAS G LL+GG +G R A+P+ Sbjct: 92 KDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPS 151 Query: 567 ARI 575 ARI Sbjct: 152 ARI 154 [141][TOP] >UniRef100_B9L1E3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1E3_THERP Length = 205 Score = 105 bits (263), Expect = 2e-21 Identities = 54/104 (51%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R+RIIF+G PI+ QVA VI+Q+L LA + E+DI +YIN PGG Y+ LA Sbjct: 24 AYDIYSRLLRDRIIFLGTPIDDQVANAVIAQMLFLAHENPEADIKLYINSPGGLVYAGLA 83 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I+P V T G+ AS +LLA G KG R+A+P++R+ Sbjct: 84 IYDTMQMIEPDVATYCVGLGASMAAVLLAAGTKGKRFALPHSRV 127 [142][TOP] >UniRef100_A0LSV0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LSV0_ACIC1 Length = 221 Score = 105 bits (263), Expect = 2e-21 Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 3/121 (2%) Frame = +3 Query: 222 GNPPVSPAIMTPGGAL---DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESD 392 G P + A + P GA D+ + L RNRI+F+G ++ +A ++ +QLL LA D + D Sbjct: 17 GVPGIPTAALPPSGASAEDDVFNKLLRNRILFLGTVVDDALANKICAQLLLLAAEDPDRD 76 Query: 393 ILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNAR 572 I +YIN PGGS + +AIYD M +++ V TV G+AAS G LL G KG RYA+P+AR Sbjct: 77 IYLYINSPGGSVDAGMAIYDTMQYVQCDVATVALGLAASMGQFLLCAGAKGKRYALPHAR 136 Query: 573 I 575 I Sbjct: 137 I 137 [143][TOP] >UniRef100_Q2CBY9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CBY9_9RHOB Length = 209 Score = 105 bits (263), Expect = 2e-21 Identities = 53/104 (50%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ +A +++QL+ L + + +I MYIN PGG S L+ Sbjct: 25 AYDIFSRLLKERIIFLNGPVHDGMASLIVAQLIHLEAENPKKEISMYINSPGGVVTSGLS 84 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+V G AAS G+LLLAGGEKGMR ++PN+RI Sbjct: 85 IYDTMQYIKPPVSTLVIGQAASMGSLLLAGGEKGMRLSLPNSRI 128 [144][TOP] >UniRef100_Q096A2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q096A2_STIAU Length = 200 Score = 105 bits (263), Expect = 2e-21 Identities = 56/104 (53%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A DL S L ++RII +G PIN +VA V++Q+L L + D E I +YIN PGGS + LA Sbjct: 16 AYDLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGINIYINSPGGSVTAGLA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M ++K V T+ G AAS G LLL G KG RYA+PNARI Sbjct: 76 IYDTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRYALPNARI 119 [145][TOP] >UniRef100_Q062N1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. BL107 RepID=Q062N1_9SYNE Length = 224 Score = 105 bits (263), Expect = 2e-21 Identities = 58/142 (40%), Positives = 83/142 (58%), Gaps = 4/142 (2%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 329 +D ++ H + + S P+ P ++ G A D+ S L R RIIF+G ++ Sbjct: 2 IDARSHHPIQNRWRSEMPISAPGPL-PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDD 60 Query: 330 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 509 VA +++Q+L L D E DI +Y+N PGGS + LAIYD M + P V T+ +G+AAS Sbjct: 61 AVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120 Query: 510 QGTLLLAGGEKGMRYAMPNARI 575 G LL+GG KG R A+PNARI Sbjct: 121 MGAFLLSGGTKGKRLALPNARI 142 [146][TOP] >UniRef100_C7M9G9 Endopeptidase Clp n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M9G9_CAPOD Length = 219 Score = 105 bits (263), Expect = 2e-21 Identities = 56/132 (42%), Positives = 78/132 (59%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 359 H V++ Y I S P + +D+ S L +RIIF+G +N QVA V +QL Sbjct: 15 HGVNSLYYDKIIGSMTPYIMEERQLNVAQMDVFSRLMMDRIIFLGTDVNDQVANIVTAQL 74 Query: 360 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 539 L L ++D DI +YIN PGGS Y+ L IYD M +IKP V T+ G+AAS +LL G Sbjct: 75 LFLESVDSAKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGIAASMAAVLLCAGT 134 Query: 540 KGMRYAMPNARI 575 +G R A+P++R+ Sbjct: 135 EGKRSALPHSRV 146 [147][TOP] >UniRef100_C4G8R5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G8R5_9FIRM Length = 190 Score = 105 bits (263), Expect = 2e-21 Identities = 52/102 (50%), Positives = 69/102 (67%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G+ +N A +++QLL L + D DI +YIN PGG +AIY Sbjct: 16 DIYSRLLKDRIIFLGEDVNETTASLIVAQLLFLESEDPNKDIHLYINSPGGVVTCGMAIY 75 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M++IKP V T+ G+AAS G LLAGG KG RYA+PNA I Sbjct: 76 DTMNYIKPDVSTICIGMAASMGAFLLAGGAKGKRYALPNAEI 117 [148][TOP] >UniRef100_C3WJ35 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fusobacterium sp. 2_1_31 RepID=C3WJ35_9FUSO Length = 193 Score = 105 bits (263), Expect = 2e-21 Identities = 55/104 (52%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G I+ VA +I+QLL L + D E DI+MYIN PGGS +A Sbjct: 16 AYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGSVTDGMA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IKP V TV G AAS G LL+ G KG R+A+ N+RI Sbjct: 76 IYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRI 119 [149][TOP] >UniRef100_B9NPG3 Clp protease n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NPG3_9RHOB Length = 196 Score = 105 bits (263), Expect = 2e-21 Identities = 54/104 (51%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIFI PI+ ++ V++QLL L + +I +YIN PGG S L+ Sbjct: 12 AYDIFSRLLKERIIFINGPIHDGMSHLVVAQLLHLEAENPNKEISIYINSPGGVVTSGLS 71 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPK T+V G AAS G++LLAGGEKGMR+++PN+RI Sbjct: 72 IYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRI 115 [150][TOP] >UniRef100_B6GCT8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GCT8_9ACTN Length = 206 Score = 105 bits (263), Expect = 2e-21 Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G + D+ S L +RI+F+G+ +N A VI+QLL L + D E DI +YIN PGG Sbjct: 17 TPRGERSYDIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDISLYINSPGGE 76 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YS LAI D M++IKP V T+ G+AAS +LLAGG KG R+++P+++I Sbjct: 77 VYSGLAILDTMNYIKPDVSTICVGMAASMAAVLLAGGAKGKRFSLPHSKI 126 [151][TOP] >UniRef100_B5JA06 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Octadecabacter antarcticus 307 RepID=B5JA06_9RHOB Length = 209 Score = 105 bits (263), Expect = 2e-21 Identities = 49/104 (47%), Positives = 76/104 (73%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ PI+ ++Q V++QLL L + + +I MYIN PGG+ +S ++ Sbjct: 25 AYDIFSRLLKERIIFVNGPIHDGMSQLVVAQLLHLEAENPKKEISMYINSPGGAVHSGMS 84 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +I+PKV T++ G+AAS G+++ GGEKGMR+++PN+ I Sbjct: 85 IYDTMQYIRPKVSTLICGMAASMGSVIAVGGEKGMRFSLPNSEI 128 [152][TOP] >UniRef100_B5IJD8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJD8_9CHRO Length = 235 Score = 105 bits (263), Expect = 2e-21 Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 4/120 (3%) Frame = +3 Query: 228 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 395 P V P ++ G A D+ S L R RIIF+G I+ VA +++QLL L D E DI Sbjct: 35 PGVLPTVVEQSGKGERAFDIYSRLLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDI 94 Query: 396 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YIN PGGS + LAIYD M + P V T+ +G+AAS G LL+GG KG R A+P+ARI Sbjct: 95 QIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARI 154 [153][TOP] >UniRef100_B4WRF4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRF4_9SYNE Length = 269 Score = 105 bits (263), Expect = 2e-21 Identities = 51/104 (49%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RI+F+G P+ +A +++QLL L D E D+ +YIN PGGS + +A Sbjct: 82 AFDIYSRLLRERIVFLGTPVMDDIADSIVAQLLFLDAEDPEKDVQLYINSPGGSVTAGMA 141 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M I+P V T+ FG+AAS G LL+GG KG R ++P+ARI Sbjct: 142 IYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMSLPSARI 185 [154][TOP] >UniRef100_Q0JMF9 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Oryza sativa RepID=Q0JMF9_ORYSJ Length = 314 Score = 105 bits (263), Expect = 2e-21 Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Frame = +3 Query: 195 TSYGAIEASGNPPVSPAIMTPG-GALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 371 T A E G PA P LD +++L R RI+F+G P++ A +ISQLL L Sbjct: 51 TLSSAWELPGPSAARPAARKPRLEELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLD 110 Query: 372 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMR 551 D+ DI ++IN PGGS + + +YD M + K + TV FG+AAS G LLA G KG R Sbjct: 111 AEDKTKDIKLFINSPGGSITAGMGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKR 170 Query: 552 YAMPNARI 575 + MPNARI Sbjct: 171 FCMPNARI 178 [155][TOP] >UniRef100_O67357 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aquifex aeolicus RepID=CLPP_AQUAE Length = 201 Score = 105 bits (263), Expect = 2e-21 Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RI+ +G PI+ VA +++QLL L + D + DI +YIN PGGS Sbjct: 18 TPRGERAYDIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGS 77 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + LAIYD M +IKP V T+ G AAS G +LLA G G RYA+P++RI Sbjct: 78 VTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRI 127 [156][TOP] >UniRef100_UPI0001B465BF ATP-dependent Clp protease proteolytic subunit n=2 Tax=Anaplasma marginale RepID=UPI0001B465BF Length = 207 Score = 105 bits (262), Expect = 2e-21 Identities = 54/104 (51%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIFI + +A +++QL+ L + E DI +YIN PGG + L+ Sbjct: 26 AYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDISLYINSPGGVVTAGLS 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G AAS G LLLAGGE GMRYA+PN+RI Sbjct: 86 IYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRI 129 [157][TOP] >UniRef100_UPI0001851361 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI0001851361 Length = 198 Score = 105 bits (262), Expect = 2e-21 Identities = 52/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA +++QLL L T + E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLETENPEKDISLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G+AAS G LLA GE G R+A+PN+ + Sbjct: 77 IYDTMQYIKPKVQTICIGMAASMGAFLLAAGEPGKRFALPNSEV 120 [158][TOP] >UniRef100_UPI00017F51FB ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F51FB Length = 194 Score = 105 bits (262), Expect = 2e-21 Identities = 52/102 (50%), Positives = 71/102 (69%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIFIG+ IN +A V++QLL L + D +SDI++YIN PGGS + AIY Sbjct: 19 DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGSVTAGFAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M++++ V T+ G+AAS LLAGG G RYA+PNA I Sbjct: 79 DTMNYVRCDVSTICIGMAASMSAFLLAGGTHGKRYALPNAEI 120 [159][TOP] >UniRef100_C5CI95 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CI95_KOSOT Length = 206 Score = 105 bits (262), Expect = 2e-21 Identities = 54/119 (45%), Positives = 78/119 (65%), Gaps = 4/119 (3%) Frame = +3 Query: 231 PVSPAIMTPGGA----LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDIL 398 PV P ++ G D+ + L RIIF+G P++ +++ V++QLL L + D + DI Sbjct: 7 PVVPYVVENKGRGERIYDIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQDPDKDIS 66 Query: 399 MYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YIN PGGS S LAIYD M +IKP V T+ G+AAS ++LAGG KG R+A+P++RI Sbjct: 67 IYINSPGGSVTSGLAIYDTMQYIKPDVSTICIGMAASMAAVILAGGSKGKRFALPHSRI 125 [160][TOP] >UniRef100_A8M1K9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Salinispora arenicola CNS-205 RepID=A8M1K9_SALAI Length = 213 Score = 105 bits (262), Expect = 2e-21 Identities = 63/136 (46%), Positives = 80/136 (58%), Gaps = 2/136 (1%) Frame = +3 Query: 174 TTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLS--SVLFRNRIIFIGQPINGQVAQRV 347 T + T AI+A G + G LD S + L + RIIF+G + QVA R+ Sbjct: 2 TDMHIPPTPLRAIDARGGDNI--------GNLDDSVYNRLLKERIIFLGSEVTDQVANRI 53 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 +QLL LA D + DI ++IN PGGS YS +AIYD M +I V TV G+AAS G LLL Sbjct: 54 CAQLLLLAAEDPDRDINLWINSPGGSVYSGMAIYDTMQFIDNDVSTVAMGMAASMGQLLL 113 Query: 528 AGGEKGMRYAMPNARI 575 G KG RYA+P+ARI Sbjct: 114 CAGTKGKRYALPHARI 129 [161][TOP] >UniRef100_Q0YUG9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YUG9_9CHLB Length = 225 Score = 105 bits (262), Expect = 2e-21 Identities = 60/136 (44%), Positives = 80/136 (58%), Gaps = 4/136 (2%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 347 H T GAIE + P ++ G A D+ S L R RIIF+G I+ VA + Sbjct: 10 HHARTLYSGAIEQGITNTLVPMVIETSGRGERAFDIFSRLLRERIIFLGNGIDEHVAGLI 69 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 ++QL+ L + D E DI +YIN PGGS + L IYD M +I+P V TV G+AAS G LL Sbjct: 70 MAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLL 129 Query: 528 AGGEKGMRYAMPNARI 575 A G KG R ++P++RI Sbjct: 130 ASGAKGKRASLPHSRI 145 [162][TOP] >UniRef100_Q0FAL8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FAL8_9RHOB Length = 204 Score = 105 bits (262), Expect = 2e-21 Identities = 51/104 (49%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 + D+ S L + RIIF+ P++ ++ +++QLL L + + DI MYIN PGG + +A Sbjct: 26 SFDIFSRLLKERIIFVSGPVHDGMSTLIVAQLLFLEAENPKKDISMYINSPGGVVTAGMA 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +I+PKV T+ G AAS G+LLLA GEKGMR+A+PNAR+ Sbjct: 86 IYDTMQYIRPKVSTLCVGQAASMGSLLLAAGEKGMRFALPNARV 129 [163][TOP] >UniRef100_C9LUB1 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUB1_9FIRM Length = 206 Score = 105 bits (262), Expect = 2e-21 Identities = 54/104 (51%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+F+G PI+ VA V++QLL L + D + DI +YIN PGG + LA Sbjct: 22 AYDIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGLA 81 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +I+P V T+ G AAS G+LLL G KG RYA+P ARI Sbjct: 82 IYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALPLARI 125 [164][TOP] >UniRef100_C4V0M9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0M9_9FIRM Length = 197 Score = 105 bits (262), Expect = 2e-21 Identities = 53/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+G PI+ VA +++Q+L L + D + DI +YIN PGG + LA Sbjct: 12 AYDIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYINSPGGVVTAGLA 71 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G AAS G++LL G KG RYA+P+ARI Sbjct: 72 IYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARI 115 [165][TOP] >UniRef100_C4DMI5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DMI5_9ACTO Length = 207 Score = 105 bits (262), Expect = 2e-21 Identities = 53/97 (54%), Positives = 65/97 (67%) Frame = +3 Query: 285 LFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSW 464 L + RI+F+G +N QVA RV +QLL LA D E DI +YIN PGGS Y +AIYD M + Sbjct: 27 LLKERIVFMGTEVNSQVANRVSAQLLLLAADDPERDINLYINSPGGSVYDGMAIYDTMQF 86 Query: 465 IKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I V T+ G+AAS G LLL G G RYA+P+ARI Sbjct: 87 ISNDVATIAMGMAASMGQLLLCAGTPGKRYALPHARI 123 [166][TOP] >UniRef100_C0UWG3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=C0UWG3_9BACT Length = 210 Score = 105 bits (262), Expect = 2e-21 Identities = 54/104 (51%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G PI+ Q+A +I+QLL L D E DI YIN PGGS + LA Sbjct: 22 AFDIYSRLLKDRIIILGTPIDDQIANLIIAQLLFLDAEDPERDIQFYINSPGGSITAGLA 81 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +++P + T+ G+AAS T LLA G KG RYA+PNA I Sbjct: 82 IYDTMQFVRPDIVTICMGLAASMATPLLAAGTKGKRYALPNATI 125 [167][TOP] >UniRef100_A8UR95 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR95_9AQUI Length = 201 Score = 105 bits (262), Expect = 2e-21 Identities = 54/110 (49%), Positives = 75/110 (68%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G A D+ S L ++RI+ +G PI+ VA +++QLL L + D + DI +YIN PGGS Sbjct: 18 TPRGERAYDIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGS 77 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + +A+YD M +IKP V T+ G AAS G +LLA G KG RYA+P++RI Sbjct: 78 VTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYALPHSRI 127 [168][TOP] >UniRef100_Q5LUQ0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruegeria pomeroyi RepID=CLPP_SILPO Length = 209 Score = 105 bits (262), Expect = 2e-21 Identities = 53/104 (50%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIFI PI+ ++ +++QLL L + +I +YIN PGG S L+ Sbjct: 26 AYDIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEAENPNKEISIYINSPGGVVTSGLS 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPK T+V G AAS G++LLAGGEKGMR+++PN+RI Sbjct: 86 IYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRI 129 [169][TOP] >UniRef100_B9KHZ4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Anaplasma marginale RepID=CLPP_ANAMF Length = 215 Score = 105 bits (262), Expect = 2e-21 Identities = 54/104 (51%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIFI + +A +++QL+ L + E DI +YIN PGG + L+ Sbjct: 34 AYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDISLYINSPGGVVTAGLS 93 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G AAS G LLLAGGE GMRYA+PN+RI Sbjct: 94 IYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRI 137 [170][TOP] >UniRef100_A8GX64 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsia bellii OSU 85-389 RepID=A8GX64_RICB8 Length = 264 Score = 105 bits (261), Expect = 3e-21 Identities = 53/104 (50%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ PI +A + +QLL L + E DI MYIN PGG + LA Sbjct: 76 AYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDIYMYINSPGGVVTAGLA 135 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+ LL GGEKGMRY++P++R+ Sbjct: 136 IYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 179 [171][TOP] >UniRef100_Q2B709 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B709_9BACI Length = 201 Score = 105 bits (261), Expect = 3e-21 Identities = 51/104 (49%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ V+ +++QLL L + E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +I+PKV TV G+AAS G LLA GEKG R+A+PN+ + Sbjct: 77 IYDTMQYIRPKVSTVCIGMAASMGAFLLAAGEKGKRFALPNSEV 120 [172][TOP] >UniRef100_C7I419 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Thiomonas intermedia K12 RepID=C7I419_THIIN Length = 202 Score = 105 bits (261), Expect = 3e-21 Identities = 52/104 (50%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R R+IF+ PIN Q+A V++QLL L + + + DI +YIN PGGS + +A Sbjct: 25 AYDIYSRLLRERVIFLVGPINDQMANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMA 84 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M +IKP V T+ G+AAS G L+A G KG RY++PN+RI Sbjct: 85 IFDTMQFIKPDVSTLCTGIAASMGAFLMAAGAKGKRYSLPNSRI 128 [173][TOP] >UniRef100_C6HX79 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HX79_9BACT Length = 201 Score = 105 bits (261), Expect = 3e-21 Identities = 55/104 (52%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R+RII +G PI+ VA VI+Q+L L + D DI +YIN PGG + LA Sbjct: 16 AYDIYSRLLRDRIIILGTPIDDTVANLVIAQMLFLESEDSSKDINLYINSPGGIVTAGLA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD + +IKP V T+ G AAS G LL+ G KG RYA+PNARI Sbjct: 76 IYDTIKFIKPDVSTICIGQAASMGAFLLSAGAKGKRYALPNARI 119 [174][TOP] >UniRef100_C4D5D7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Spirosoma linguale DSM 74 RepID=C4D5D7_9SPHI Length = 229 Score = 105 bits (261), Expect = 3e-21 Identities = 50/103 (48%), Positives = 72/103 (69%) Frame = +3 Query: 267 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 446 +D+ S L +RIIF+G P++ +A +++QLL L + D + DILMY+N PGGS Y+ L I Sbjct: 53 VDVFSRLMADRIIFMGLPVDDNIANIIVAQLLFLESADPKKDILMYLNSPGGSVYAGLGI 112 Query: 447 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YD M +++P V TV +AAS G +LLAGG G R A+P+AR+ Sbjct: 113 YDTMQYVRPDVATVCTSLAASMGAVLLAGGAAGKRSALPHARV 155 [175][TOP] >UniRef100_B6B6H4 Clp protease n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B6H4_9RHOB Length = 202 Score = 105 bits (261), Expect = 3e-21 Identities = 51/104 (49%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++ +++QLL L + +I MYIN PGG S L+ Sbjct: 18 AYDIFSRLLKERIIFVNGPVHDGMSSLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 77 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL GEKGMR+++PN+R+ Sbjct: 78 IYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRV 121 [176][TOP] >UniRef100_A6FW15 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FW15_9RHOB Length = 210 Score = 105 bits (261), Expect = 3e-21 Identities = 52/104 (50%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++ +++QLL L + +I MYIN PGG S L+ Sbjct: 26 AYDIFSRLLKERIIFVNGPVHDGMSSLIVAQLLHLEAENPAKEISMYINSPGGVVTSGLS 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL GEKGMR+++PN+RI Sbjct: 86 IYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRI 129 [177][TOP] >UniRef100_C5WMG5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum bicolor RepID=C5WMG5_SORBI Length = 283 Score = 105 bits (261), Expect = 3e-21 Identities = 64/179 (35%), Positives = 97/179 (54%), Gaps = 3/179 (1%) Frame = +3 Query: 48 QLAFSHRNSCTISSSL---PSLYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEA 218 QL S R + +++++ P YG + + G+ S D V + Y +E+ Sbjct: 31 QLLRSRRCARAVTAAVAGGPVPYGAAPRRGIWSIRDDLV----------VPRSPYFPVES 80 Query: 219 SGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDIL 398 + P+ M + S LF++RII G P+ +A +++QLL L ID DI+ Sbjct: 81 AAGQERGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDII 140 Query: 399 MYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 MY+N PGGS + +AI+D M I+P V TV G+AAS G LL+ G KG RY++PN+RI Sbjct: 141 MYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRI 199 [178][TOP] >UniRef100_Q2LTK5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=CLPP_SYNAS Length = 194 Score = 105 bits (261), Expect = 3e-21 Identities = 54/104 (51%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G PI+ +VA +I+QLL L + D + +I Y+N PGG S +A Sbjct: 17 AYDIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPGGHISSGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V TV G AAS G LLLA GE+G R A+P++RI Sbjct: 77 IYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRI 120 [179][TOP] >UniRef100_Q1RJH2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsia bellii RML369-C RepID=CLPP_RICBR Length = 227 Score = 105 bits (261), Expect = 3e-21 Identities = 53/104 (50%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ PI +A + +QLL L + E DI MYIN PGG + LA Sbjct: 39 AYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLEAENPEKDIYMYINSPGGVVTAGLA 98 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+ LL GGEKGMRY++P++R+ Sbjct: 99 IYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRV 142 [180][TOP] >UniRef100_B9EAG5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=CLPP_MACCJ Length = 194 Score = 105 bits (261), Expect = 3e-21 Identities = 53/104 (50%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L D E DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M IKP V T+ G+AAS G+ LLA G KG R+A+PNA + Sbjct: 77 IYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120 [181][TOP] >UniRef100_A4J7L9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfotomaculum reducens MI-1 RepID=CLPP_DESRM Length = 195 Score = 105 bits (261), Expect = 3e-21 Identities = 56/104 (53%), Positives = 68/104 (65%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIFIG PI+ +A VI+Q L L D E DI +YIN PGG + LA Sbjct: 18 AYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLA 77 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G AAS G+ LLA G G RYA+P ARI Sbjct: 78 IYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARI 121 [182][TOP] >UniRef100_A9IR54 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bordetella petrii DSM 12804 RepID=CLPP_BORPD Length = 217 Score = 105 bits (261), Expect = 3e-21 Identities = 50/104 (48%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R R+IF+ P+N A +++QLL L + + + DI +YIN PGGS Y+ +A Sbjct: 38 AYDIYSRLLRERLIFLVGPVNDNTANLIVAQLLFLESENPDKDISLYINSPGGSVYAGMA 97 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M ++KP V T+ G+AAS G LLA G+KG R+ +PN+RI Sbjct: 98 IYDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRI 141 [183][TOP] >UniRef100_Q7WK83 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bordetella RepID=CLPP_BORBR Length = 217 Score = 105 bits (261), Expect = 3e-21 Identities = 52/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R R+IF+ P+N A V++QLL L + + + DI YIN PGGS Y+ +A Sbjct: 38 AYDIYSRLLRERLIFLVGPVNDNTANLVVAQLLFLESENPDKDISFYINSPGGSVYAGMA 97 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LLA G+KG R+ +PN+RI Sbjct: 98 IYDTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRI 141 [184][TOP] >UniRef100_Q7UA36 ATP-dependent Clp protease proteolytic subunit 1 n=1 Tax=Synechococcus sp. WH 8102 RepID=CLPP1_SYNPX Length = 224 Score = 105 bits (261), Expect = 3e-21 Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 4/142 (2%) Frame = +3 Query: 162 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 329 +D ++ H + + S P+ P ++ G A D+ S L R RIIF+G ++ Sbjct: 2 IDARSHHPIQNRWRAEMPISAPGPL-PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDD 60 Query: 330 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 509 VA +++Q+L L D E DI +YIN PGGS + LAIYD M + P V T+ +G+AAS Sbjct: 61 AVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120 Query: 510 QGTLLLAGGEKGMRYAMPNARI 575 G LL+GG KG R A+PNARI Sbjct: 121 MGAFLLSGGCKGKRLALPNARI 142 [185][TOP] >UniRef100_C6CSW6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSW6_PAESJ Length = 195 Score = 104 bits (260), Expect = 4e-21 Identities = 52/104 (50%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G +N VA +I+Q+L LA D E DI +YIN PGGS + +A Sbjct: 19 AYDIYSRLLKDRIIFLGSGVNDVVANSIIAQMLFLAAEDPEKDISLYINSPGGSITAGMA 78 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKP V T+ G+AAS G LL G G RYA+PN+ + Sbjct: 79 IYDTMQYIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEV 122 [186][TOP] >UniRef100_B7IHX6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermosipho africanus TCF52B RepID=B7IHX6_THEAB Length = 201 Score = 104 bits (260), Expect = 4e-21 Identities = 53/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+F+G I+ VA V++QLL L D + DI +YIN PGGS + LA Sbjct: 22 AYDIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVSAGLA 81 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IK V T+ G AAS G +LLAGG KG R+++PN+RI Sbjct: 82 IYDTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPNSRI 125 [187][TOP] >UniRef100_Q1NNM5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNM5_9DELT Length = 200 Score = 104 bits (260), Expect = 4e-21 Identities = 56/110 (50%), Positives = 72/110 (65%), Gaps = 2/110 (1%) Frame = +3 Query: 252 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 425 TP G + D+ S L + RIIF+G +N +VA VI+Q+L L D + DI YIN PGGS Sbjct: 11 TPRGERSYDIYSRLLKERIIFLGTGVNDEVANVVIAQMLFLEADDPDKDITFYINSPGGS 70 Query: 426 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 + LAIYD M ++K + T+ G AAS G +LLA G KG RYA+PNARI Sbjct: 71 VTAGLAIYDTMRYVKCDIATLCLGQAASMGAVLLAAGTKGKRYALPNARI 120 [188][TOP] >UniRef100_C4W9B7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Staphylococcus warneri L37603 RepID=C4W9B7_STAWA Length = 196 Score = 104 bits (260), Expect = 4e-21 Identities = 53/104 (50%), Positives = 68/104 (65%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L D E DI +YIN PGGS + A Sbjct: 17 AYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD + IKP V T+ G+AAS G+ LLA G KG RYA+PNA + Sbjct: 77 IYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEV 120 [189][TOP] >UniRef100_A6GHD0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GHD0_9DELT Length = 217 Score = 104 bits (260), Expect = 4e-21 Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 7/125 (5%) Frame = +3 Query: 222 GNPPVSPAI-----MTPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATID 380 G PP+S I T G + D+ S L ++RI+F+G PIN +VA +I+QLL L + D Sbjct: 5 GQPPLSMNIPFVVEQTHRGERSWDIYSRLLKDRIVFLGDPINDRVASIIIAQLLFLESED 64 Query: 381 EESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAM 560 + DI +YIN PGG + L IYD M +++ V T G AAS G LLAGG KG R+A+ Sbjct: 65 PDKDIRLYINSPGGVVTAGLGIYDTMQYVRCDVATYCLGQAASMGAFLLAGGAKGKRFAL 124 Query: 561 PNARI 575 PNARI Sbjct: 125 PNARI 129 [190][TOP] >UniRef100_A9PA38 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus trichocarpa RepID=A9PA38_POPTR Length = 297 Score = 104 bits (260), Expect = 4e-21 Identities = 50/115 (43%), Positives = 71/115 (61%) Frame = +3 Query: 231 PVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYIN 410 P +PA G D +L R RI+F+G I+ VA +ISQLL L D DI +++N Sbjct: 71 PQTPATSMRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVN 130 Query: 411 CPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 CPGGS + +AIYD + ++ V T+ G++AS +++L GG KG R+AMPN RI Sbjct: 131 CPGGSLSASMAIYDVVQLVRADVSTIALGISASTASIILGGGTKGKRFAMPNTRI 185 [191][TOP] >UniRef100_Q0AWF0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=CLPP_SYNWW Length = 200 Score = 104 bits (260), Expect = 4e-21 Identities = 53/102 (51%), Positives = 70/102 (68%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G I+ VA VI+QLL L D + DI +YIN PGGS + +AIY Sbjct: 20 DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPGGSITAGMAIY 79 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D + +I+P V T+ G+AAS G LLA G+KG RYA+PNA I Sbjct: 80 DTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEI 121 [192][TOP] >UniRef100_Q4ULF0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsia felis RepID=CLPP_RICFE Length = 201 Score = 104 bits (260), Expect = 4e-21 Identities = 53/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ + +A V++QLL L + + DI MYIN PGG + LA Sbjct: 17 AYDIYSRLLKERIIFVCSTVEDHMANLVVAQLLFLEAENPKKDIYMYINSPGGVVTAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+LLL GGEKGMRY++P++RI Sbjct: 77 IYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120 [193][TOP] >UniRef100_Q3B5V8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium luteolum DSM 273 RepID=CLPP_PELLD Length = 225 Score = 104 bits (260), Expect = 4e-21 Identities = 59/136 (43%), Positives = 80/136 (58%), Gaps = 4/136 (2%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 347 H S GAIE + P ++ G A D+ S L R RIIF+G I+ VA + Sbjct: 10 HHASKLYSGAIEQGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLI 69 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 ++QL+ L + D E DI +Y+N PGGS + L IYD M +I+P V TV G+AAS G LL Sbjct: 70 MAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLL 129 Query: 528 AGGEKGMRYAMPNARI 575 A G KG R ++P++RI Sbjct: 130 ASGAKGKRASLPHSRI 145 [194][TOP] >UniRef100_A2SFB5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Methylibium petroleiphilum PM1 RepID=CLPP_METPP Length = 202 Score = 104 bits (260), Expect = 4e-21 Identities = 51/104 (49%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R R+IF+ P+N Q A V++QLL L + + + DI +YIN PGGS + L+ Sbjct: 25 AYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLS 84 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M +IKP V T+ G+AAS G LLA G KG R+A+PN+R+ Sbjct: 85 IFDTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFALPNSRV 128 [195][TOP] >UniRef100_C3PNP8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsia africae ESF-5 RepID=C3PNP8_RICAE Length = 216 Score = 104 bits (259), Expect = 6e-21 Identities = 52/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ + +A +++QLL L + + DI MYIN PGG + LA Sbjct: 32 AYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLA 91 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+LLL GGEKGMRY++P++RI Sbjct: 92 IYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 135 [196][TOP] >UniRef100_B4S457 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S457_PROA2 Length = 226 Score = 104 bits (259), Expect = 6e-21 Identities = 58/128 (45%), Positives = 79/128 (61%), Gaps = 4/128 (3%) Frame = +3 Query: 204 GAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 371 GAIE + P ++ G A D+ S L R RIIF+G PI+ VA +++QL+ L Sbjct: 18 GAIEQGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTPIDEHVASLLMAQLIFLE 77 Query: 372 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMR 551 + D E DI +YIN PGGS + L IYD M +I+P+V TV G+AAS G LLA G K R Sbjct: 78 SEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKDKR 137 Query: 552 YAMPNARI 575 ++P++RI Sbjct: 138 ASLPHSRI 145 [197][TOP] >UniRef100_B0BXY8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsia rickettsii str. Iowa RepID=B0BXY8_RICRO Length = 216 Score = 104 bits (259), Expect = 6e-21 Identities = 52/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ + +A +++QLL L + + DI MYIN PGG + LA Sbjct: 32 AYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLA 91 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+LLL GGEKGMRY++P++RI Sbjct: 92 IYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 135 [198][TOP] >UniRef100_D0BNM0 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Granulicatella elegans ATCC 700633 RepID=D0BNM0_9LACT Length = 197 Score = 104 bits (259), Expect = 6e-21 Identities = 54/104 (51%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII + PI+ +A +I+QLL L D E DI MYIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIIMVSGPIHDDMANAIIAQLLFLDAQDPEKDIYMYINSPGGSVTAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IK V T+ G+AAS G+ LL G KG RYA+PNA I Sbjct: 77 IYDTMNFIKADVQTIAMGLAASMGSFLLTAGTKGKRYALPNAEI 120 [199][TOP] >UniRef100_C2M3A3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M3A3_CAPGI Length = 219 Score = 104 bits (259), Expect = 6e-21 Identities = 56/130 (43%), Positives = 78/130 (60%) Frame = +3 Query: 186 VSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLT 365 VS+T Y I +S P + +D+ S L +RIIF+G +N VA + +QLL Sbjct: 17 VSSTYYDKIISSMTPYIMEERQLNVTQMDVFSRLMMDRIIFLGTDVNSHVANIIQAQLLF 76 Query: 366 LATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKG 545 L ++D DI +YIN PGG YS L IYD M +IKP+V T+ G+AAS +LL G KG Sbjct: 77 LESLDASKDIQIYINSPGGEVYSGLGIYDTMQFIKPEVATICTGMAASMAAVLLCAGAKG 136 Query: 546 MRYAMPNARI 575 R A+P++R+ Sbjct: 137 KRSALPHSRV 146 [200][TOP] >UniRef100_C0V3T2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Veillonella parvula DSM 2008 RepID=C0V3T2_9FIRM Length = 197 Score = 104 bits (259), Expect = 6e-21 Identities = 53/102 (51%), Positives = 69/102 (67%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G PI+ VA VI+Q+L L D + DI +YIN PGG + +AIY Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIY 77 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IKP V T+ G AAS G +LL G KG RYA+P+ARI Sbjct: 78 DTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARI 119 [201][TOP] >UniRef100_B7RGD1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseobacter sp. GAI101 RepID=B7RGD1_9RHOB Length = 215 Score = 104 bits (259), Expect = 6e-21 Identities = 51/104 (49%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++ +++QLL L + +I MYIN PGG S L+ Sbjct: 26 AYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL GEKGMR+++PN+R+ Sbjct: 86 IYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGMRFSLPNSRV 129 [202][TOP] >UniRef100_B5KD76 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KD76_9RHOB Length = 195 Score = 104 bits (259), Expect = 6e-21 Identities = 49/104 (47%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ PI+ ++ +++QLL L + + +I MYIN PGG + L+ Sbjct: 12 AYDIFSRLLKERIIFVNGPIHSGMSHLIVAQLLHLEAENPKKEISMYINSPGGEVTAGLS 71 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T++ G+AAS G+++ GGEKGMR+A+PNA + Sbjct: 72 IYDTMQYIKPKVSTLICGMAASMGSVIAIGGEKGMRFALPNAEV 115 [203][TOP] >UniRef100_A3SXY1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SXY1_9RHOB Length = 219 Score = 104 bits (259), Expect = 6e-21 Identities = 51/104 (49%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++ +++QLL L + +I MYIN PGG S L+ Sbjct: 26 AYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 85 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL GEKGMR+++PN+R+ Sbjct: 86 IYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGMRFSLPNSRV 129 [204][TOP] >UniRef100_A3SCR5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SCR5_9RHOB Length = 211 Score = 104 bits (259), Expect = 6e-21 Identities = 51/104 (49%), Positives = 72/104 (69%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++ +++QLL L + +I MYIN PGG S L+ Sbjct: 18 AYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 77 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL GEKGMR+++PN+R+ Sbjct: 78 IYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGMRFSLPNSRV 121 [205][TOP] >UniRef100_C5XLB5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum bicolor RepID=C5XLB5_SORBI Length = 313 Score = 104 bits (259), Expect = 6e-21 Identities = 52/103 (50%), Positives = 67/103 (65%) Frame = +3 Query: 267 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 446 LD S++L R RI+F+G ++ A +ISQLL L D+ DI ++IN PGGS + + + Sbjct: 75 LDTSNMLLRQRIVFLGSSVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMGV 134 Query: 447 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YD M + K V TV FG+AAS G LLA G KG RY MPNARI Sbjct: 135 YDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARI 177 [206][TOP] >UniRef100_B6TS08 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays RepID=B6TS08_MAIZE Length = 281 Score = 104 bits (259), Expect = 6e-21 Identities = 54/130 (41%), Positives = 78/130 (60%) Frame = +3 Query: 186 VSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLT 365 V + Y +E++ P+ M + S LF++RII G P+ +A +++QLL Sbjct: 68 VPRSPYFPVESAAGQERGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLY 127 Query: 366 LATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKG 545 L ID DI+MY+N PGGS + +AI+D M I+P V TV G+AAS G LL+ G KG Sbjct: 128 LDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKG 187 Query: 546 MRYAMPNARI 575 RY++PN+RI Sbjct: 188 KRYSLPNSRI 197 [207][TOP] >UniRef100_A8INX1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlamydomonas reinhardtii RepID=A8INX1_CHLRE Length = 283 Score = 104 bits (259), Expect = 6e-21 Identities = 60/136 (44%), Positives = 78/136 (57%), Gaps = 7/136 (5%) Frame = +3 Query: 189 STTSYGAIEASG---NPPVSPAIMTPGGA----LDLSSVLFRNRIIFIGQPINGQVAQRV 347 S +S +EA G +P V+P I G +DL L NRIIFIG IN ++A ++ Sbjct: 42 SRSSRRNVEARGIRRSPVVTPDIQIGHGEDAIEMDLYRYLLSNRIIFIGGYINDKMATQI 101 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 + L+ L +DE DI +YIN PGG YSVL + D M IKP V TV G S +L++ Sbjct: 102 VGSLMALEAVDENEDIRIYINSPGGQPYSVLGVVDAMQSIKPDVQTVALGACYSYASLVV 161 Query: 528 AGGEKGMRYAMPNARI 575 A G KG RYAM N R+ Sbjct: 162 AAGTKGKRYAMKNTRL 177 [208][TOP] >UniRef100_A8GSH5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsia rickettsii str. 'Sheila Smith' RepID=CLPP_RICRS Length = 201 Score = 104 bits (259), Expect = 6e-21 Identities = 52/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ + +A +++QLL L + + DI MYIN PGG + LA Sbjct: 17 AYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+LLL GGEKGMRY++P++RI Sbjct: 77 IYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120 [209][TOP] >UniRef100_C4K1D4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsia peacockii str. Rustic RepID=CLPP_RICPU Length = 201 Score = 104 bits (259), Expect = 6e-21 Identities = 52/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ + +A +++QLL L + + DI MYIN PGG + LA Sbjct: 17 AYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+LLL GGEKGMRY++P++RI Sbjct: 77 IYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120 [210][TOP] >UniRef100_Q92HM5 ATP-dependent Clp protease proteolytic subunit n=2 Tax=spotted fever group RepID=CLPP_RICCN Length = 201 Score = 104 bits (259), Expect = 6e-21 Identities = 52/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ + +A +++QLL L + + DI MYIN PGG + LA Sbjct: 17 AYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+ G A S G+LLL GGEKGMRY++P++RI Sbjct: 77 IYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120 [211][TOP] >UniRef100_C0QGT0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=CLPP_DESAH Length = 205 Score = 104 bits (259), Expect = 6e-21 Identities = 52/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G ++ +VA +++QLL L + D E DI YIN PGG + +A Sbjct: 17 AYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YD M +IKP V TV G AAS G LLLA G KG R+++PN+RI Sbjct: 77 VYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRI 120 [212][TOP] >UniRef100_Q3ATL3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=CLPP_CHLCH Length = 225 Score = 104 bits (259), Expect = 6e-21 Identities = 58/136 (42%), Positives = 81/136 (59%), Gaps = 4/136 (2%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 347 H GAIE + + P ++ G A D+ S L R RIIF+G I+ VA + Sbjct: 10 HHAKKLYSGAIEQGISNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTGIDEHVAGLI 69 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 ++QL+ L + D E DI +YIN PGGS + L IYD M +I+P++ TV G+AAS G LL Sbjct: 70 MAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLL 129 Query: 528 AGGEKGMRYAMPNARI 575 A G KG R ++P++RI Sbjct: 130 ASGNKGKRASLPHSRI 145 [213][TOP] >UniRef100_Q3ANI8 ATP-dependent Clp protease proteolytic subunit 1 n=1 Tax=Synechococcus sp. CC9605 RepID=CLPP1_SYNSC Length = 207 Score = 104 bits (259), Expect = 6e-21 Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 4/120 (3%) Frame = +3 Query: 228 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 395 P P ++ G A D+ S L R RIIF+G ++ VA +++Q+L L D E DI Sbjct: 6 PGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDI 65 Query: 396 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +YIN PGGS + LAIYD M + P V T+ +G+AAS G LL+GG KG R A+PNARI Sbjct: 66 QIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARI 125 [214][TOP] >UniRef100_B1YLE6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YLE6_EXIS2 Length = 192 Score = 103 bits (258), Expect = 7e-21 Identities = 52/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA V++QLL LA D + +I +YIN PGGS + +A Sbjct: 16 AYDIYSRLLKDRIILLGSAIDDNVANSVVAQLLFLAAEDPDKEISLYINSPGGSITAGMA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IKP+V T+ G+AAS G LL G KG R+A+PNA I Sbjct: 76 IYDTMNFIKPQVSTICIGMAASMGAFLLQAGAKGKRFALPNAEI 119 [215][TOP] >UniRef100_C8NG95 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NG95_9LACT Length = 197 Score = 103 bits (258), Expect = 7e-21 Identities = 54/104 (51%), Positives = 68/104 (65%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII + PI +A +I+QLL L D E DI MYIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIIMVSGPIQDDMANAIIAQLLFLDAQDPEKDIYMYINSPGGSVTAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IK V T+ G+AAS G+ LL G KG RYA+PNA I Sbjct: 77 IYDTMNFIKADVQTIAMGLAASMGSFLLTAGAKGKRYALPNAEI 120 [216][TOP] >UniRef100_C5RPD9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium cellulovorans 743B RepID=C5RPD9_CLOCL Length = 194 Score = 103 bits (258), Expect = 7e-21 Identities = 50/102 (49%), Positives = 71/102 (69%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RI+F+G+ +N A V++QLL L + D + DI +YIN PGGS + +AIY Sbjct: 19 DIYSRLLKDRIVFLGEEVNDASASVVVAQLLFLESEDPDKDISLYINSPGGSITAGMAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M++IKP V T+ G+AAS G LLA G KG R+A+PN+ I Sbjct: 79 DTMNYIKPDVATICIGMAASMGAFLLAAGAKGKRFALPNSEI 120 [217][TOP] >UniRef100_C4FPE3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPE3_9FIRM Length = 197 Score = 103 bits (258), Expect = 7e-21 Identities = 52/102 (50%), Positives = 69/102 (67%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G PI+ VA VI+Q+L L D + DI +YIN PGG + +AIY Sbjct: 18 DIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHLYINSPGGVVTAGMAIY 77 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IKP V T+ G AAS G +LL G KG RYA+P+AR+ Sbjct: 78 DTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARV 119 [218][TOP] >UniRef100_C2JPI8 ATP-dependent Clp protease proteolytic subunit (Fragment) n=3 Tax=Enterococcus faecalis RepID=C2JPI8_ENTFA Length = 181 Score = 103 bits (258), Expect = 7e-21 Identities = 53/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII + PI+ VA VI+QLL L D E DI +YIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M+++K V T+V G+AAS G+ LL G+KG R+A+PNA I Sbjct: 77 IFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEI 120 [219][TOP] >UniRef100_B0S2N6 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Finegoldia magna RepID=B0S2N6_FINM2 Length = 195 Score = 103 bits (258), Expect = 7e-21 Identities = 52/100 (52%), Positives = 68/100 (68%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L + RIIF+ +N Q+A VI+QLL L + D + DI +YIN PGGS + LAIY Sbjct: 20 DIFSRLLKERIIFVTGEVNDQMADLVIAQLLFLESEDPKKDIQLYINSPGGSVSAGLAIY 79 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNA 569 D M ++KP V T+ G+AAS G +LL G KG RYA+PNA Sbjct: 80 DTMQYVKPDVSTICVGMAASMGAILLTSGAKGKRYALPNA 119 [220][TOP] >UniRef100_A3YZS2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YZS2_9SYNE Length = 196 Score = 103 bits (258), Expect = 7e-21 Identities = 53/104 (50%), Positives = 67/104 (64%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RIIF+G+P+ + A RV++QLL L D E DI +YIN PGGS Y L Sbjct: 15 AFDIYSRLLRERIIFLGEPVTAESANRVVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLG 74 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M IKP V TV G+AAS G LL G KG R ++ ++RI Sbjct: 75 IFDTMQHIKPDVQTVCVGLAASMGAFLLTAGAKGKRSSLHHSRI 118 [221][TOP] >UniRef100_B6TBU2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays RepID=B6TBU2_MAIZE Length = 285 Score = 103 bits (258), Expect = 7e-21 Identities = 51/103 (49%), Positives = 67/103 (65%) Frame = +3 Query: 267 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 446 LD +++L R RI+F+G P++ A +ISQLL L D+ DI ++IN PGGS + + + Sbjct: 72 LDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMGV 131 Query: 447 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 YD M + K V TV FG+AAS G LLA G KG RY PNARI Sbjct: 132 YDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCXPNARI 174 [222][TOP] >UniRef100_Q8XYP7 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Ralstonia solanacearum RepID=CLPP_RALSO Length = 217 Score = 103 bits (258), Expect = 7e-21 Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 4/134 (2%) Frame = +3 Query: 186 VSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVIS 353 ++ T A+E G V P ++ G A D+ S L + R+IF+ +N Q A V++ Sbjct: 10 LARTQASALETQGLGLV-PMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVA 68 Query: 354 QLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAG 533 QLL L + + + DI +YIN PGGS + LA+YD M ++KP V T+ G+AAS G LLA Sbjct: 69 QLLFLESENPDKDISLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAA 128 Query: 534 GEKGMRYAMPNARI 575 G KG RYA+PN+RI Sbjct: 129 GAKGKRYALPNSRI 142 [223][TOP] >UniRef100_A4SDA4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium phaeovibrioides DSM 265 RepID=CLPP_PROVI Length = 225 Score = 103 bits (258), Expect = 7e-21 Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 4/136 (2%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 347 H S GAIE + P ++ G A D+ S L R RIIF+G I+ VA + Sbjct: 10 HHASKLYSGAIEEGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLI 69 Query: 348 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 527 ++QL+ L + D + DI +Y+N PGGS + L IYD M +I+P V TV G+AAS G LL Sbjct: 70 MAQLIFLESEDPDRDIFIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLL 129 Query: 528 AGGEKGMRYAMPNARI 575 A G KG R ++P++RI Sbjct: 130 ASGAKGKRASLPHSRI 145 [224][TOP] >UniRef100_C4ZGF4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Eubacterium rectale ATCC 33656 RepID=CLPP_EUBR3 Length = 193 Score = 103 bits (258), Expect = 7e-21 Identities = 53/102 (51%), Positives = 68/102 (66%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G+ +N A V++QLL L + D DI +YIN PGG + LAIY Sbjct: 19 DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDIHLYINSPGGMVTAGLAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IK V T+ G+AAS G LLAGG KG RYA+PNA I Sbjct: 79 DTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEI 120 [225][TOP] >UniRef100_Q837R0 ATP-dependent Clp protease proteolytic subunit n=19 Tax=Enterococcus faecalis RepID=CLPP_ENTFA Length = 197 Score = 103 bits (258), Expect = 7e-21 Identities = 53/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII + PI+ VA VI+QLL L D E DI +YIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M+++K V T+V G+AAS G+ LL G+KG R+A+PNA I Sbjct: 77 IFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEI 120 [226][TOP] >UniRef100_Q0A6A7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=CLPP_ALHEH Length = 214 Score = 103 bits (258), Expect = 7e-21 Identities = 57/123 (46%), Positives = 78/123 (63%), Gaps = 1/123 (0%) Frame = +3 Query: 210 IEASGNPPVSPAIMTPGG-ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 386 IEA+G P+ G A D+ S L + R+IF+ P+ +A +++QLL L + + + Sbjct: 13 IEATGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIVAQLLFLESENPD 72 Query: 387 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPN 566 DI +YIN PGG+ + LAIYD M +IKP V TV G AAS G LLL GG KG RYA+PN Sbjct: 73 KDIHIYINSPGGAVTAGLAIYDTMQFIKPDVSTVCIGQAASMGALLLTGGTKGKRYALPN 132 Query: 567 ARI 575 +R+ Sbjct: 133 SRM 135 [227][TOP] >UniRef100_Q3B0U1 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Synechococcus sp. CC9902 RepID=CLPP2_SYNS9 Length = 207 Score = 103 bits (258), Expect = 7e-21 Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 4/120 (3%) Frame = +3 Query: 228 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 395 P P ++ G A D+ S L R RIIF+G ++ VA +++Q+L L D E DI Sbjct: 6 PGPLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDI 65 Query: 396 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 +Y+N PGGS + LAIYD M + P V T+ +G+AAS G LL+GG KG R A+PNARI Sbjct: 66 QIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARI 125 [228][TOP] >UniRef100_UPI00016955B0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016955B0 Length = 196 Score = 103 bits (257), Expect = 9e-21 Identities = 52/102 (50%), Positives = 69/102 (67%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIFIG I+ V VI+QLL L+ D + DI +YIN PGGS + L IY Sbjct: 19 DIYSRLLKDRIIFIGSAIDDDVVNLVIAQLLFLSAQDADKDIHLYINSPGGSVTAGLGIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IKP V T+ G+AAS G+LLL G KG R+A+PN+ + Sbjct: 79 DTMQYIKPDVSTICVGMAASMGSLLLTAGAKGKRFALPNSEV 120 [229][TOP] >UniRef100_B4SEP7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SEP7_PELPB Length = 225 Score = 103 bits (257), Expect = 9e-21 Identities = 57/128 (44%), Positives = 79/128 (61%), Gaps = 4/128 (3%) Frame = +3 Query: 204 GAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 371 GAIE + P ++ G A D+ S L R RIIF+G I+ VA +++QL+ L Sbjct: 18 GAIEQGITNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLE 77 Query: 372 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMR 551 + D E DI +Y+N PGGS + L IYD M +I+P+V TV G+AAS G LLA G KG R Sbjct: 78 SEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKGKR 137 Query: 552 YAMPNARI 575 ++P++RI Sbjct: 138 ASLPHSRI 145 [230][TOP] >UniRef100_B3EFW5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium limicola DSM 245 RepID=B3EFW5_CHLL2 Length = 225 Score = 103 bits (257), Expect = 9e-21 Identities = 58/128 (45%), Positives = 78/128 (60%), Gaps = 4/128 (3%) Frame = +3 Query: 204 GAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 371 GAIE + P ++ G A D+ S L R RIIF+G I+ VA V++QL+ L Sbjct: 18 GAIEEGIRNTLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLE 77 Query: 372 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMR 551 + D E DI +YIN PGGS + L IYD M +I+P + TV G+AAS G LLA G KG R Sbjct: 78 SEDPERDIFIYINSPGGSVSAGLGIYDTMQYIRPDIATVCVGMAASMGAFLLASGTKGKR 137 Query: 552 YAMPNARI 575 ++P++RI Sbjct: 138 ASLPHSRI 145 [231][TOP] >UniRef100_C9RBL2 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Ammonifex degensii KC4 RepID=C9RBL2_9THEO Length = 200 Score = 103 bits (257), Expect = 9e-21 Identities = 55/104 (52%), Positives = 68/104 (65%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIFIG PI+ +A VI+QLL L D E DI +YIN PGG + +A Sbjct: 19 AYDIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHLYINSPGGLVTAGMA 78 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +I+P V T+ G AAS LLA G KG RYA+P ARI Sbjct: 79 IYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARI 122 [232][TOP] >UniRef100_C6J201 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J201_9BACL Length = 196 Score = 103 bits (257), Expect = 9e-21 Identities = 52/102 (50%), Positives = 69/102 (67%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+ I+ +VA VI+QLL LA D E DI +YIN PGGS + + IY Sbjct: 19 DIYSRLLKDRIIFLSNAIDDEVANLVIAQLLFLAAEDPEKDIHLYINSPGGSVTAGMGIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IKP V T+ G+AAS G+LLL G G RYA+PN+ + Sbjct: 79 DTMQYIKPDVSTICVGMAASMGSLLLTAGAPGKRYALPNSEV 120 [233][TOP] >UniRef100_C4FU87 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FU87_9FIRM Length = 198 Score = 103 bits (257), Expect = 9e-21 Identities = 53/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+ + PI+ VA VI+QLL L D + DI +YIN PGGS + LA Sbjct: 17 AYDIYSRLLKDRIVMLSGPIDDAVANSVIAQLLFLDAQDPDKDIYLYINSPGGSVSAGLA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M++I V T+V G+AAS G LLA GEKG RYA+PNA + Sbjct: 77 IFDTMNFINADVQTIVIGMAASMGAFLLAAGEKGKRYALPNAEV 120 [234][TOP] >UniRef100_C1QE40 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QE40_9SPIR Length = 193 Score = 103 bits (257), Expect = 9e-21 Identities = 54/102 (52%), Positives = 68/102 (66%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G IN VA VI+QLL L + D E DI +YIN PGG + L +Y Sbjct: 18 DIYSRLLKDRIIFLGGEINDDVANIVIAQLLFLESADPEKDISLYINSPGGVVTAALGMY 77 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M ++KP V T+ G AAS G LLLAGG KG R+A N+RI Sbjct: 78 DTMQYVKPDVATLCVGQAASAGALLLAGGAKGKRFATANSRI 119 [235][TOP] >UniRef100_B5IJ76 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IJ76_9CHRO Length = 196 Score = 103 bits (257), Expect = 9e-21 Identities = 51/104 (49%), Positives = 67/104 (64%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L R RI+F+G+P+ + A R+++QLL L D E DI +YIN PGGS Y L Sbjct: 15 AFDIYSRLLRERIVFLGEPVTAESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLG 74 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 I+D M IKP V TV G+AAS G LL G KG R ++ ++RI Sbjct: 75 IFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLTHSRI 118 [236][TOP] >UniRef100_A6EMA1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=unidentified eubacterium SCB49 RepID=A6EMA1_9BACT Length = 226 Score = 103 bits (257), Expect = 9e-21 Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 5/135 (3%) Frame = +3 Query: 186 VSTTSYGAIEASGNPP-VSPAIMTP----GGALDLSSVLFRNRIIFIGQPINGQVAQRVI 350 VS+T Y +I S P ++P I+ A+D+ S L +RIIF+G IN QVA V Sbjct: 17 VSSTYYDSILTSMYPVGLTPNIIEERQMNAVAMDVFSRLMMDRIIFLGTGINDQVANIVQ 76 Query: 351 SQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLA 530 +QLL LA++D DI +YIN PGGS Y+ L IYD M +I P V T+ G+AAS G +LL Sbjct: 77 AQLLFLASVDATRDIQIYINSPGGSVYAGLGIYDTMQFITPDVATICTGMAASMGAVLLC 136 Query: 531 GGEKGMRYAMPNARI 575 GEKG R + ++R+ Sbjct: 137 AGEKGKRSGLTHSRV 151 [237][TOP] >UniRef100_A5KJG9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJG9_9FIRM Length = 193 Score = 103 bits (257), Expect = 9e-21 Identities = 52/102 (50%), Positives = 69/102 (67%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L + RIIF+G+ +N A +++QLL L D + DI +YIN PGGS + +AIY Sbjct: 19 DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDIQLYINSPGGSVTAGMAIY 78 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M +IK V TV G+AAS G LLAGG+KG R+A+PNA I Sbjct: 79 DTMQYIKCDVSTVCIGMAASMGAFLLAGGKKGKRFALPNAEI 120 [238][TOP] >UniRef100_A3V3U7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V3U7_9RHOB Length = 198 Score = 103 bits (257), Expect = 9e-21 Identities = 51/104 (49%), Positives = 73/104 (70%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P++ ++Q V++QLL L + + + +I MYIN PGG S L+ Sbjct: 17 AYDIFSRLLKERIIFLNGPVHDGMSQLVVAQLLHLESENPKKEISMYINSPGGVVTSGLS 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +IKPKV T+V G AAS G+LLL G GMR+++PN+R+ Sbjct: 77 IYDTMQYIKPKVSTLVIGQAASMGSLLLTAGHPGMRFSLPNSRV 120 [239][TOP] >UniRef100_Q9ST19 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brassica rapa RepID=Q9ST19_BRACM Length = 311 Score = 103 bits (257), Expect = 9e-21 Identities = 69/183 (37%), Positives = 93/183 (50%), Gaps = 1/183 (0%) Frame = +3 Query: 30 HRRIPSQLA-FSHRNSCTISSSLPSLYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYG 206 H+RIP + F R+S +S S P + LSS DVS S Sbjct: 32 HQRIPKRAKPFCVRSSMNLSGSRP-------RQTLSSNW-------------DVSKFSVD 71 Query: 207 AIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 386 ++ S P+ + LD +++L R RI+F+G ++ A VISQLL L D E Sbjct: 72 SVAQS------PSRLPSFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSE 125 Query: 387 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPN 566 DI ++IN PGGS + + IYD M K V TV G+AAS G LLA G KG RY MPN Sbjct: 126 RDITLFINSPGGSITAGMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPN 185 Query: 567 ARI 575 +++ Sbjct: 186 SKV 188 [240][TOP] >UniRef100_B1HVR0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillales RepID=CLPP_LYSSC Length = 197 Score = 103 bits (257), Expect = 9e-21 Identities = 52/104 (50%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA +++QLL L D + DI +YIN PGGS + +A Sbjct: 17 AYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGMA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M IKPKV T+ G+AAS G LLA GE G R+A+PNA + Sbjct: 77 IYDTMQIIKPKVQTICIGMAASMGAFLLAAGEPGKRFALPNAEV 120 [241][TOP] >UniRef100_B3R4W1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Cupriavidus RepID=CLPP_CUPTR Length = 216 Score = 103 bits (257), Expect = 9e-21 Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 4/134 (2%) Frame = +3 Query: 186 VSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVIS 353 ++TT A+E G V P ++ G A D+ S L + R++F+ +N Q A V++ Sbjct: 10 LATTQASALETQGLGLV-PMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVA 68 Query: 354 QLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAG 533 QLL L + + + D+ +YIN PGGS + LAIYD M +IKP V T+ G+AAS G LLA Sbjct: 69 QLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAA 128 Query: 534 GEKGMRYAMPNARI 575 G KG R A+PN+RI Sbjct: 129 GAKGKRSALPNSRI 142 [242][TOP] >UniRef100_C0QW91 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=CLPP_BRAHW Length = 198 Score = 103 bits (257), Expect = 9e-21 Identities = 54/102 (52%), Positives = 68/102 (66%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RIIF+G IN VA VI+QLL L + D E DI +YIN PGG + L +Y Sbjct: 23 DIYSRLLKDRIIFLGGEINDDVANVVIAQLLFLESADPEKDISLYINSPGGVVTAALGMY 82 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M ++KP V T+ G AAS G LLLAGG KG R+A N+RI Sbjct: 83 DTMQYVKPDVATLCVGQAASAGALLLAGGAKGKRFATANSRI 124 [243][TOP] >UniRef100_UPI0001745C29 ATP-dependent Clp protease, proteolytic subunit ClpP n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745C29 Length = 237 Score = 103 bits (256), Expect = 1e-20 Identities = 55/104 (52%), Positives = 69/104 (66%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIFIG PI+ QVA VI+QLL L D + DI +YIN PGGS + LA Sbjct: 32 AYDIYSRLLKDRIIFIGTPIDDQVANIVIAQLLFLQMQDPKKDINIYINSPGGSVTAGLA 91 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M ++ V T G+AAS G +LL G KG RYA+PN+ I Sbjct: 92 IYDTMQFVTCDVNTYCIGIAASMGAVLLTAGTKGKRYALPNSHI 135 [244][TOP] >UniRef100_Q50LH5 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Oryza sativa Japonica Group RepID=Q50LH5_ORYSJ Length = 282 Score = 103 bits (256), Expect = 1e-20 Identities = 54/130 (41%), Positives = 77/130 (59%) Frame = +3 Query: 186 VSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLT 365 V + Y +E + P+ M + S LF++RII G P+ +A +++QLL Sbjct: 69 VPRSPYFPVEYASGQERGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLY 128 Query: 366 LATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKG 545 L ID DI+MY+N PGGS + +AI+D M I+P V TV G+AAS G LL+ G KG Sbjct: 129 LDAIDPNKDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKG 188 Query: 546 MRYAMPNARI 575 RY++PN+RI Sbjct: 189 KRYSLPNSRI 198 [245][TOP] >UniRef100_A6LLP4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LLP4_THEM4 Length = 202 Score = 103 bits (256), Expect = 1e-20 Identities = 51/104 (49%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RI+F+G I+ VA +++QLL L D + DI +YIN PGGS + LA Sbjct: 22 AYDIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDKDIQLYINSPGGSVSAGLA 81 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M ++K V T+ G AAS G +LLAGG KG R+++PN+RI Sbjct: 82 IYDTMQYVKCDVTTICIGQAASMGAVLLAGGTKGKRFSLPNSRI 125 [246][TOP] >UniRef100_A0LXW6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gramella forsetii KT0803 RepID=A0LXW6_GRAFK Length = 225 Score = 103 bits (256), Expect = 1e-20 Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 5/137 (3%) Frame = +3 Query: 180 HDVSTTSYGAIEASGNPP-VSPAIMTP----GGALDLSSVLFRNRIIFIGQPINGQVAQR 344 H++++ Y + +S P ++P I+ A+D+ S L +RIIF+G IN QVA Sbjct: 15 HNINSNYYDKVVSSMLPQGMTPNIIEERQMNAVAMDVFSRLMMDRIIFLGTGINEQVANI 74 Query: 345 VISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLL 524 V +QLL L + D DI +YIN PGGS Y+ L IYD M +IKP V T+ G+AAS G +L Sbjct: 75 VQAQLLFLESTDASKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVL 134 Query: 525 LAGGEKGMRYAMPNARI 575 L GE G R +P++R+ Sbjct: 135 LCAGEDGKRSGLPHSRV 151 [247][TOP] >UniRef100_C7JBN5 Clp protease proteolytic subunit ClpP n=8 Tax=Acetobacter pasteurianus RepID=C7JBN5_ACEP3 Length = 220 Score = 103 bits (256), Expect = 1e-20 Identities = 53/104 (50%), Positives = 70/104 (67%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L + RIIF+ P+ QVA + +QLL L +++ +I YIN PGG + LA Sbjct: 31 AFDIYSRLLQERIIFLTGPVYDQVASLISAQLLYLESVNPNKEISFYINSPGGVVSAGLA 90 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M +I+ V TV G AAS G+LLLAGGEKG R+A+PNAR+ Sbjct: 91 IYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEKGRRFALPNARV 134 [248][TOP] >UniRef100_C5QQD9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Staphylococcus epidermidis M23864:W1 RepID=C5QQD9_STAEP Length = 195 Score = 103 bits (256), Expect = 1e-20 Identities = 52/104 (50%), Positives = 68/104 (65%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RII +G I+ VA ++SQLL L D E DI +YIN PGGS + A Sbjct: 17 AYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFA 76 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD + IKP V T+ G+AAS G+ LLA G KG R+A+PNA + Sbjct: 77 IYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120 [249][TOP] >UniRef100_C3WCG7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCG7_FUSMR Length = 191 Score = 103 bits (256), Expect = 1e-20 Identities = 53/104 (50%), Positives = 71/104 (68%) Frame = +3 Query: 264 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 443 A D+ S L ++RIIF+G I+ VA +++QLL L D E DI+MYIN PGG + +A Sbjct: 16 AYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPEKDIIMYINSPGGVVTAGMA 75 Query: 444 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 IYD M++IKP V TV G AAS G LLL+ G KG R+A+ ++RI Sbjct: 76 IYDTMNYIKPDVQTVCIGQAASMGALLLSAGAKGKRFALEHSRI 119 [250][TOP] >UniRef100_C2PG00 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus cereus MM3 RepID=C2PG00_BACCE Length = 198 Score = 103 bits (256), Expect = 1e-20 Identities = 55/102 (53%), Positives = 68/102 (66%) Frame = +3 Query: 270 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 449 D+ S L ++RII IG IN QVA V++QLL L D E DI +YIN PGGST + AI Sbjct: 24 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAIL 83 Query: 450 DCMSWIKPKVGTVVFGVAASQGTLLLAGGEKGMRYAMPNARI 575 D M+ IKP V T+ G+AAS G LLL G KG R+A+PN+ I Sbjct: 84 DTMNLIKPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEI 125