BB907344 ( RCE05695 )

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[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  214 bits (546), Expect = 3e-54
 Identities = 104/190 (54%), Positives = 134/190 (70%), Gaps = 3/190 (1%)
 Frame = +3

Query: 15  PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
           PL+ A +  ++SG   YSYA G+LSHFLG+GGT+ F +  TSS FV+ +LR+ +WG T T
Sbjct: 205 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 264

Query: 195 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
           + Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 265 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 324

Query: 375 IRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 545
           I+I GID+ P +C+QINY QRF WF ++RP      K  ++ +PSRV N+  K    TN+
Sbjct: 325 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 384

Query: 546 VNAFAIMCAT 575
           VNAFAIMCAT
Sbjct: 385 VNAFAIMCAT 394

[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  214 bits (546), Expect = 3e-54
 Identities = 104/190 (54%), Positives = 134/190 (70%), Gaps = 3/190 (1%)
 Frame = +3

Query: 15   PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
            PL+ A +  ++SG   YSYA G+LSHFLG+GGT+ F +  TSS FV+ +LR+ +WG T T
Sbjct: 1015 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 1074

Query: 195  IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
            + Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 1075 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 1134

Query: 375  IRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 545
            I+I GID+ P +C+QINY QRF WF ++RP      K  ++ +PSRV N+  K    TN+
Sbjct: 1135 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 1194

Query: 546  VNAFAIMCAT 575
            VNAFAIMCAT
Sbjct: 1195 VNAFAIMCAT 1204

[3][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  211 bits (538), Expect = 2e-53
 Identities = 104/191 (54%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
           T  PL+ A K V+ S   +YSYA G+LSHFLGVGG + F V  TSS FVS +LR+ +WG 
Sbjct: 26  TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 85

Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
             T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  
Sbjct: 86  QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 145

Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 542
           E+YI+I GI++   LC+ INYKQ FGWF +VR   T+KE  + +PSR++N+  K  E  N
Sbjct: 146 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 205

Query: 543 FVNAFAIMCAT 575
            VNAF+IMCAT
Sbjct: 206 HVNAFSIMCAT 216

[4][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  211 bits (538), Expect = 2e-53
 Identities = 104/191 (54%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
            T  PL+ A K V+ S   +YSYA G+LSHFLGVGG + F V  TSS FVS +LR+ +WG 
Sbjct: 1046 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 1105

Query: 186  TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
              T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  
Sbjct: 1106 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 1165

Query: 366  EFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 542
            E+YI+I GI++   LC+ INYKQ FGWF +VR   T+KE  + +PSR++N+  K  E  N
Sbjct: 1166 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 1225

Query: 543  FVNAFAIMCAT 575
             VNAF+IMCAT
Sbjct: 1226 HVNAFSIMCAT 1236

[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  207 bits (526), Expect = 6e-52
 Identities = 102/191 (53%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
 Frame = +3

Query: 6   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
           T  PL+ AEKS+T++  ETYSY+ G+LSHFLG+GG +RF VHSTSS  ++ KLR+ +W  
Sbjct: 201 TNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRVFLWEH 260

Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
           +    +  +  H   + G      IQ+   +TANFG  GA+FW++PLS+P AP+ VE+KF
Sbjct: 261 SQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQTVETKF 319

Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMKGVECTN 542
           EFYIRI GID  PDLC+QINYKQRFGWFM+ P + T  E    +PSR+ N+ +K  +C N
Sbjct: 320 EFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVN 379

Query: 543 FVNAFAIMCAT 575
           F NAFAIMCAT
Sbjct: 380 FTNAFAIMCAT 390

[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  206 bits (525), Expect = 8e-52
 Identities = 95/192 (49%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
            T +P++LA +  + +  + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT
Sbjct: 1034 TKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGT 1093

Query: 186  TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
             PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F
Sbjct: 1094 IPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGF 1153

Query: 366  EFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 539
            ++YI IHGI+++  LC++INY Q F WFM+      T     + +P+R++NL  K V+ T
Sbjct: 1154 QYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVT 1213

Query: 540  NFVNAFAIMCAT 575
            NFVNA AIMCAT
Sbjct: 1214 NFVNALAIMCAT 1225

[7][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  206 bits (524), Expect = 1e-51
 Identities = 102/189 (53%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
 Frame = +3

Query: 15  PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
           P++LA K  +TSG   YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P 
Sbjct: 204 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 263

Query: 195 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
             Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+Y
Sbjct: 264 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 323

Query: 375 IRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 548
           I+I GI++ P LC++INYKQRF W ++      K    ++ +PSR+ NL  K V+ TNFV
Sbjct: 324 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 383

Query: 549 NAFAIMCAT 575
           NA AI+CAT
Sbjct: 384 NALAILCAT 392

[8][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  206 bits (524), Expect = 1e-51
 Identities = 102/189 (53%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
 Frame = +3

Query: 15   PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
            P++LA K  +TSG   YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P 
Sbjct: 1041 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 1100

Query: 195  IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
              Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+Y
Sbjct: 1101 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 1160

Query: 375  IRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 548
            I+I GI++ P LC++INYKQRF W ++      K    ++ +PSR+ NL  K V+ TNFV
Sbjct: 1161 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 1220

Query: 549  NAFAIMCAT 575
            NA AI+CAT
Sbjct: 1221 NALAILCAT 1229

[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  204 bits (520), Expect = 3e-51
 Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
           T +P++LA +  + +  + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 201 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 260

Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
            PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F
Sbjct: 261 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 320

Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 539
           ++YI IHGI  + +LC++INY Q F WFM+      T     + +P+R++NL  K V+ T
Sbjct: 321 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 380

Query: 540 NFVNAFAIMCAT 575
           NFVNA AIMCAT
Sbjct: 381 NFVNALAIMCAT 392

[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  204 bits (520), Expect = 3e-51
 Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 2/192 (1%)
 Frame = +3

Query: 6    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
            T +P++LA +  + +  + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 1033 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 1092

Query: 186  TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
             PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F
Sbjct: 1093 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 1152

Query: 366  EFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 539
            ++YI IHGI  + +LC++INY Q F WFM+      T     + +P+R++NL  K V+ T
Sbjct: 1153 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 1212

Query: 540  NFVNAFAIMCAT 575
            NFVNA AIMCAT
Sbjct: 1213 NFVNALAIMCAT 1224

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  111 bits (277), Expect = 5e-23
 Identities = 59/190 (31%), Positives = 98/190 (51%)
 Frame = +3

Query: 6   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
           T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ KL I +W  
Sbjct: 214 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSK 272

Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
              +       H D   G + +L I+  FY+++ +G  GA   +  L SPM+P  +++ F
Sbjct: 273 EQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPF 332

Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 545
           +   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + ++ T +
Sbjct: 333 DMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 392

Query: 546 VNAFAIMCAT 575
            NAF  MC T
Sbjct: 393 TNAFLQMCQT 402

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  109 bits (273), Expect = 1e-22
 Identities = 60/190 (31%), Positives = 98/190 (51%)
 Frame = +3

Query: 6   TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
           T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ + RI +W  
Sbjct: 202 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 260

Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
              I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F
Sbjct: 261 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 320

Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 545
           +   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + ++ T +
Sbjct: 321 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 380

Query: 546 VNAFAIMCAT 575
            NAF  MC T
Sbjct: 381 TNAFLQMCQT 390

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  109 bits (273), Expect = 1e-22
 Identities = 60/190 (31%), Positives = 98/190 (51%)
 Frame = +3

Query: 6    TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
            T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ + RI +W  
Sbjct: 885  TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 943

Query: 186  TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
               I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F
Sbjct: 944  EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 1003

Query: 366  EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 545
            +   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + ++ T +
Sbjct: 1004 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 1063

Query: 546  VNAFAIMCAT 575
             NAF  MC T
Sbjct: 1064 TNAFLQMCQT 1073

[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
           RepID=Q65624_9SECO
          Length = 557

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
 Frame = +3

Query: 48  SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 218
           SG  T YS+          VGG +  +V  T SK +SC++ +I+    T   + Q  ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317

Query: 219 HCDIVEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 395
            C I  GG    +RIQ+PF     F + G Q  +  +  PM  + + + +++ +    I 
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376

Query: 396 SQPD-LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 560
            + D   + I     F W  +        FQ  +P+R+S+LV+ G   T   NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430

[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
 Frame = +3

Query: 66  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349

Query: 408 LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
           +         F    ++P+         +P  + +   K    T   N  + + A
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404

[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
 Frame = +3

Query: 69  YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 242
           Y+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290

Query: 243 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 410
             E+ I++ F+S A       +  ++PLS P+AP+     +EF + I+    DSQ  P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350

Query: 411 CKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
                    F    ++P+         +P  + +   K    T   N  + + A
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404

[17][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
 Frame = +3

Query: 66  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289

Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 413
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I+    DSQ    
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348

Query: 414 KQINYKQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
              +  + + WF    ++P+         +P  + +   K    T   N  + + A
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404

[18][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
 Frame = +3

Query: 66  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287

Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347

Query: 408 LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
           +         F    ++P+         +P  + +   K    T   N  + + A
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 402

[19][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
 Frame = +3

Query: 66   SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
            SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 816  SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875

Query: 240  GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
            G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 876  GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935

Query: 408  LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
            +         F    ++P+         +P  + +   K    T   N  + + A
Sbjct: 936  MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 990

[20][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
 Frame = +3

Query: 66  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
           G  E+  ++  +S++       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349

Query: 408 LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
           +         F    ++P+         +P  + +   K    T   N  + + A
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404