[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 214 bits (546), Expect = 3e-54
Identities = 104/190 (54%), Positives = 134/190 (70%), Gaps = 3/190 (1%)
Frame = +3
Query: 15 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 205 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 264
Query: 195 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 265 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 324
Query: 375 IRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 545
I+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ K TN+
Sbjct: 325 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 384
Query: 546 VNAFAIMCAT 575
VNAFAIMCAT
Sbjct: 385 VNAFAIMCAT 394
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 214 bits (546), Expect = 3e-54
Identities = 104/190 (54%), Positives = 134/190 (70%), Gaps = 3/190 (1%)
Frame = +3
Query: 15 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 1015 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 1074
Query: 195 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 1075 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 1134
Query: 375 IRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNF 545
I+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+ K TN+
Sbjct: 1135 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 1194
Query: 546 VNAFAIMCAT 575
VNAFAIMCAT
Sbjct: 1195 VNAFAIMCAT 1204
[3][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 211 bits (538), Expect = 2e-53
Identities = 104/191 (54%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG
Sbjct: 26 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 85
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES
Sbjct: 86 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 145
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 542
E+YI+I GI++ LC+ INYKQ FGWF +VR T+KE + +PSR++N+ K E N
Sbjct: 146 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 205
Query: 543 FVNAFAIMCAT 575
VNAF+IMCAT
Sbjct: 206 HVNAFSIMCAT 216
[4][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 211 bits (538), Expect = 2e-53
Identities = 104/191 (54%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG
Sbjct: 1046 TNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGA 1105
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES
Sbjct: 1106 QITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESAL 1165
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTN 542
E+YI+I GI++ LC+ INYKQ FGWF +VR T+KE + +PSR++N+ K E N
Sbjct: 1166 EYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVIN 1225
Query: 543 FVNAFAIMCAT 575
VNAF+IMCAT
Sbjct: 1226 HVNAFSIMCAT 1236
[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 207 bits (526), Expect = 6e-52
Identities = 102/191 (53%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR+ +W
Sbjct: 201 TNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRVFLWEH 260
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
+ + + H + G IQ+ +TANFG GA+FW++PLS+P AP+ VE+KF
Sbjct: 261 SQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQTVETKF 319
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMKGVECTN 542
EFYIRI GID PDLC+QINYKQRFGWFM+ P + T E +PSR+ N+ +K +C N
Sbjct: 320 EFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVN 379
Query: 543 FVNAFAIMCAT 575
F NAFAIMCAT
Sbjct: 380 FTNAFAIMCAT 390
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 206 bits (525), Expect = 8e-52
Identities = 95/192 (49%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT
Sbjct: 1034 TKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGT 1093
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 1094 IPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGF 1153
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 539
++YI IHGI+++ LC++INY Q F WFM+ T + +P+R++NL K V+ T
Sbjct: 1154 QYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVT 1213
Query: 540 NFVNAFAIMCAT 575
NFVNA AIMCAT
Sbjct: 1214 NFVNALAIMCAT 1225
[7][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 206 bits (524), Expect = 1e-51
Identities = 102/189 (53%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Frame = +3
Query: 15 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P
Sbjct: 204 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 263
Query: 195 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y
Sbjct: 264 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 323
Query: 375 IRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 548
I+I GI++ P LC++INYKQRF W ++ K ++ +PSR+ NL K V+ TNFV
Sbjct: 324 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 383
Query: 549 NAFAIMCAT 575
NA AI+CAT
Sbjct: 384 NALAILCAT 392
[8][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 206 bits (524), Expect = 1e-51
Identities = 102/189 (53%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Frame = +3
Query: 15 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 194
P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P
Sbjct: 1041 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 1100
Query: 195 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 374
Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y
Sbjct: 1101 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 1160
Query: 375 IRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFV 548
I+I GI++ P LC++INYKQRF W ++ K ++ +PSR+ NL K V+ TNFV
Sbjct: 1161 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 1220
Query: 549 NAFAIMCAT 575
NA AI+CAT
Sbjct: 1221 NALAILCAT 1229
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 204 bits (520), Expect = 3e-51
Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 201 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 260
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 261 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 320
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 539
++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K V+ T
Sbjct: 321 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 380
Query: 540 NFVNAFAIMCAT 575
NFVNA AIMCAT
Sbjct: 381 NFVNALAIMCAT 392
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 204 bits (520), Expect = 3e-51
Identities = 97/192 (50%), Positives = 133/192 (69%), Gaps = 2/192 (1%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT
Sbjct: 1033 TKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGT 1092
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F
Sbjct: 1093 VPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGF 1152
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECT 539
++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL K V+ T
Sbjct: 1153 QYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQIT 1212
Query: 540 NFVNAFAIMCAT 575
NFVNA AIMCAT
Sbjct: 1213 NFVNALAIMCAT 1224
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 111 bits (277), Expect = 5e-23
Identities = 59/190 (31%), Positives = 98/190 (51%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL I +W
Sbjct: 214 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSK 272
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
+ H D G + +L I+ FY+++ +G GA + L SPM+P +++ F
Sbjct: 273 EQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPF 332
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 545
+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T +
Sbjct: 333 DMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 392
Query: 546 VNAFAIMCAT 575
NAF MC T
Sbjct: 393 TNAFLQMCQT 402
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 109 bits (273), Expect = 1e-22
Identities = 60/190 (31%), Positives = 98/190 (51%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 202 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 260
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F
Sbjct: 261 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 320
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 545
+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T +
Sbjct: 321 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 380
Query: 546 VNAFAIMCAT 575
NAF MC T
Sbjct: 381 TNAFLQMCQT 390
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 109 bits (273), Expect = 1e-22
Identities = 60/190 (31%), Positives = 98/190 (51%)
Frame = +3
Query: 6 TALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT 185
T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 885 TIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSK 943
Query: 186 TPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKF 365
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F
Sbjct: 944 EQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPF 1003
Query: 366 EFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNF 545
+ +I G +C+ IN+ QRFGWF V P + ++ + ++L + ++ T +
Sbjct: 1004 DMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGY 1063
Query: 546 VNAFAIMCAT 575
NAF MC T
Sbjct: 1064 TNAFLQMCQT 1073
[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 61.2 bits (147), Expect = 5e-08
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Frame = +3
Query: 48 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 218
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 219 HCDIVEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 395
C I GG +RIQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 396 SQPD-LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 560
+ D + I F W + FQ +P+R+S+LV+ G T NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.4 bits (137), Expect = 8e-07
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Frame = +3
Query: 66 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 408 LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
+ F ++P+ +P + + K T N + + A
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404
[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Frame = +3
Query: 69 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 242
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 243 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 410
E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350
Query: 411 CKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
F ++P+ +P + + K T N + + A
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404
[17][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 56.6 bits (135), Expect = 1e-06
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Frame = +3
Query: 66 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 413
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 414 KQINYKQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
+ + + WF ++P+ +P + + K T N + + A
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404
[18][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.5 bits (132), Expect = 3e-06
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Frame = +3
Query: 66 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347
Query: 408 LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
+ F ++P+ +P + + K T N + + A
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 402
[19][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.5 bits (132), Expect = 3e-06
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Frame = +3
Query: 66 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935
Query: 408 LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
+ F ++P+ +P + + K T N + + A
Sbjct: 936 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 990
[20][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.7 bits (130), Expect = 5e-06
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Frame = +3
Query: 66 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 239
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 240 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 407
G E+ ++ +S++ + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 408 LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCA 572
+ F ++P+ +P + + K T N + + A
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVA 404