BB906998 ( RCE05290 )

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BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BB906998  RCE05290
         (575 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_B7FHQ4 Putative uncharacterized protein n=1 Tax=Medica...   202   2e-50
UniRef100_C6SZL0 Putative uncharacterized protein n=1 Tax=Glycin...   192   2e-47
UniRef100_B9H1C8 Predicted protein n=1 Tax=Populus trichocarpa R...   174   4e-42
UniRef100_B9RZY4 Putative uncharacterized protein n=1 Tax=Ricinu...   168   2e-40
UniRef100_UPI000150555D MED21 (MEDIATOR 21) n=1 Tax=Arabidopsis ...   157   4e-37
UniRef100_Q9M0Z8 Putative uncharacterized protein AT4g04780 n=1 ...   157   4e-37
UniRef100_Q84WP9 Putative uncharacterized protein At4g04780 (Fra...   157   4e-37
UniRef100_C0LU16 MED21/SRB7 n=1 Tax=Arabidopsis thaliana RepID=C...   157   4e-37
UniRef100_Q9ZS95 T4B21.7 protein n=1 Tax=Arabidopsis thaliana Re...   150   9e-35
UniRef100_Q8W0T0 Putative uncharacterized protein Sb07g002720 n=...   120   1e-25
UniRef100_A9SBM1 Predicted protein n=1 Tax=Physcomitrella patens...   119   2e-25
UniRef100_A2YQZ8 Putative uncharacterized protein n=1 Tax=Oryza ...   118   3e-25
UniRef100_Q6YYC3 RNA polymerase II complex component SRB7 protei...   117   6e-25
UniRef100_B9FYY7 Putative uncharacterized protein n=1 Tax=Oryza ...   117   6e-25
UniRef100_UPI0000DD93AE Os08g0135600 n=1 Tax=Oryza sativa Japoni...    77   9e-13
UniRef100_C1EEJ5 Predicted protein n=1 Tax=Micromonas sp. RCC299...    76   2e-12
UniRef100_A4S7Q4 Predicted protein n=1 Tax=Ostreococcus lucimari...    68   6e-10
UniRef100_UPI00016E01F0 UPI00016E01F0 related cluster n=1 Tax=Ta...    61   5e-08
UniRef100_B7PUK9 Mediator of RNA polymerase II transcription sub...    61   5e-08
UniRef100_Q00V02 RNA polymerase II holoenzyme and mediator subco...    61   7e-08
UniRef100_Q7ZTI5 Mediator of RNA polymerase II transcription sub...    61   7e-08
UniRef100_C1BIM7 Mediator of RNA polymerase II transcription sub...    60   9e-08
UniRef100_C1MX33 Predicted protein n=1 Tax=Micromonas pusilla CC...    60   9e-08
UniRef100_C1BFI0 Mediator of RNA polymerase II transcription sub...    60   1e-07
UniRef100_B5XGZ6 Mediator of RNA polymerase II transcription sub...    60   2e-07
UniRef100_UPI00003A9A21 PREDICTED: hypothetical protein n=1 Tax=...    59   2e-07
UniRef100_Q2TBU8 Mediator of RNA polymerase II transcription sub...    59   2e-07
UniRef100_UPI00005EA75C PREDICTED: similar to SRB7 n=1 Tax=Monod...    59   3e-07
UniRef100_UPI0000495315 PREDICTED: SRB7 suppressor of RNA polyme...    58   5e-07
UniRef100_UPI000017F598 UPI000017F598 related cluster n=1 Tax=Ra...    58   5e-07
UniRef100_UPI00004BE8FD PREDICTED: similar to SRB7 suppressor of...    58   5e-07
UniRef100_A7RLY3 Predicted protein n=1 Tax=Nematostella vectensi...    58   5e-07
UniRef100_Q9CQ39 Mediator of RNA polymerase II transcription sub...    58   5e-07
UniRef100_Q4R6N3 Mediator of RNA polymerase II transcription sub...    58   5e-07
UniRef100_Q13503 Mediator of RNA polymerase II transcription sub...    58   5e-07
UniRef100_UPI0000D56683 PREDICTED: similar to Srb7p: RNA polymer...    57   1e-06
UniRef100_UPI0000520E00 PREDICTED: similar to Srb7p: RNA polymer...    56   2e-06
UniRef100_B5G0X5 Putative SRB7 suppressor of RNA polymerase B va...    55   3e-06
UniRef100_B5G0X4 Putative SRB7 suppressor of RNA polymerase B va...    55   3e-06
UniRef100_Q7PTL0 Mediator of RNA polymerase II transcription sub...    55   3e-06
UniRef100_UPI0000588990 PREDICTED: similar to Srb7p: RNA polymer...    55   4e-06
UniRef100_B2KG29 Mediator complex subunit 21 n=1 Tax=Mus musculu...    55   4e-06
UniRef100_Q5RE46 Mediator of RNA polymerase II transcription sub...    55   4e-06
graphical overview:
alignment
UniRef100_B7FHQ4 UniRef100_B7FHQ4 UniRef100_C6SZL0 UniRef100_C6SZL0 UniRef100_B9H1C8 UniRef100_B9H1C8 UniRef100_B9RZY4 UniRef100_B9RZY4 UniRef100_UPI000150555D UniRef100_UPI000150555D UniRef100_Q9M0Z8 UniRef100_Q9M0Z8 UniRef100_Q84WP9 UniRef100_Q84WP9 UniRef100_C0LU16 UniRef100_C0LU16 UniRef100_Q9ZS95 UniRef100_Q9ZS95 UniRef100_Q8W0T0 UniRef100_Q8W0T0 UniRef100_A9SBM1 UniRef100_A9SBM1 UniRef100_A2YQZ8 UniRef100_A2YQZ8 UniRef100_Q6YYC3 UniRef100_Q6YYC3 UniRef100_B9FYY7 UniRef100_B9FYY7 UniRef100_UPI0000DD93AE UniRef100_UPI0000DD93AE UniRef100_C1EEJ5 UniRef100_C1EEJ5 UniRef100_A4S7Q4 UniRef100_A4S7Q4 UniRef100_UPI00016E01F0 UniRef100_UPI00016E01F0 UniRef100_B7PUK9 UniRef100_B7PUK9 UniRef100_Q00V02 UniRef100_Q00V02 UniRef100_Q7ZTI5 UniRef100_Q7ZTI5 UniRef100_C1BIM7 UniRef100_C1BIM7 UniRef100_C1MX33 UniRef100_C1MX33 UniRef100_C1BFI0 UniRef100_C1BFI0 UniRef100_B5XGZ6 UniRef100_B5XGZ6 UniRef100_UPI00003A9A21 UniRef100_UPI00003A9A21 UniRef100_Q2TBU8 UniRef100_Q2TBU8 UniRef100_UPI00005EA75C UniRef100_UPI00005EA75C UniRef100_UPI0000495315 UniRef100_UPI0000495315 UniRef100_UPI000017F598 UniRef100_UPI000017F598 UniRef100_UPI00004BE8FD UniRef100_UPI00004BE8FD UniRef100_A7RLY3 UniRef100_A7RLY3 UniRef100_Q9CQ39 UniRef100_Q9CQ39 UniRef100_Q4R6N3 UniRef100_Q4R6N3 UniRef100_Q13503 UniRef100_Q13503 UniRef100_UPI0000D56683 UniRef100_UPI0000D56683 UniRef100_UPI0000520E00 UniRef100_UPI0000520E00 UniRef100_B5G0X5 UniRef100_B5G0X5 UniRef100_B5G0X4 UniRef100_B5G0X4 UniRef100_Q7PTL0 UniRef100_Q7PTL0 UniRef100_UPI0000588990 UniRef100_UPI0000588990 UniRef100_B2KG29 UniRef100_B2KG29