BB906666 ( RCE04917 )

[UP]


[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  275 bits (703), Expect = 2e-72
 Identities = 131/193 (67%), Positives = 147/193 (76%), Gaps = 1/193 (0%)
 Frame = +2

Query: 2   STLVEAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSL 181
           STLVEAYRTDN ++HQ YELHQPIP DAAP++  R PA G+KLVPLMYHYGHV HDP   
Sbjct: 68  STLVEAYRTDNQQKHQPYELHQPIPADAAPIIDKRQPAPGLKLVPLMYHYGHVIHDP--- 124

Query: 182 TDQNRSDDSATSVDSDPNAPTRYG-YPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNAT 358
                          DP+ P +   YP+DSRIY LI   YP YL+V++ YCRPIGTV AT
Sbjct: 125 ---------------DPDQPDQTKVYPLDSRIYNLIMSTYPSYLSVLHDYCRPIGTVEAT 169

Query: 359 FEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRY 538
           F DFN EQIPSAPID  RK+ +L H+ KFLD KPYLP+HFVDTQYCKTPLVTGTGYHNRY
Sbjct: 170 FNDFNTEQIPSAPIDEDRKQQILKHLFKFLDVKPYLPIHFVDTQYCKTPLVTGTGYHNRY 229

Query: 539 SFKQKAHAKYSHP 577
           SFKQ+AHAKYSHP
Sbjct: 230 SFKQRAHAKYSHP 242

[2][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  151 bits (382), Expect = 3e-35
 Identities = 75/182 (41%), Positives = 109/182 (59%)
 Frame = +2

Query: 32  NAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSA 211
           NA +++ ++ +  +  D   +   R+P  GI+LV   +H G+V       + Q   D   
Sbjct: 85  NAIKNRPFQFYTDLFTDT-DLPTDRIPKPGIELVNAYFHPGNVIRPNPEFSKQLTPDMEL 143

Query: 212 TSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPS 391
              +S       YG P+D+ +  LI  +YP+YL+ I  YCRP GT +ATF DFNKEQI +
Sbjct: 144 DQFESYIPGDIDYGPPIDNELLTLIYRKYPQYLDPITKYCRPAGTTDATFRDFNKEQIKT 203

Query: 392 APIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYS 571
              D  R  N++  IH+F++  PY+PLHFVDT YCK PLVTGTGYHNR+S+ +++ A + 
Sbjct: 204 EDSDALRLSNIMDLIHEFMNITPYMPLHFVDTFYCKLPLVTGTGYHNRHSYFRRSFAHFC 263

Query: 572 HP 577
           HP
Sbjct: 264 HP 265

[3][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  144 bits (364), Expect = 4e-33
 Identities = 78/191 (40%), Positives = 104/191 (54%), Gaps = 1/191 (0%)
 Frame = +2

Query: 8   LVEAYRTDNAKRHQVYELHQ-PIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLT 184
           ++E  ++     H+ Y LH+ PIPDD       R+P  GIKL+P  Y             
Sbjct: 72  ILEDKQSQQGFPHEYYRLHESPIPDD-------RIPPSGIKLLPFEYK------------ 112

Query: 185 DQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFE 364
                  S   V + P  P   G+ +  RI +L+  +YP+YL  +  Y RP+GT NAT  
Sbjct: 113 -------SMNVVTATPEVPES-GFKIHPRIERLLRSKYPQYLQYVRKYTRPLGTTNATVS 164

Query: 365 DFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSF 544
           DF K Q PS P++P R  +V++H+ K +   PYLPLHFVDTQY K PL  GTGYHNR S 
Sbjct: 165 DFFKPQTPSQPVEPTRINHVMSHVMKKMAITPYLPLHFVDTQYDKRPLANGTGYHNRRSH 224

Query: 545 KQKAHAKYSHP 577
           +   HA +SHP
Sbjct: 225 EMNIHALFSHP 235

[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  144 bits (362), Expect = 6e-33
 Identities = 76/190 (40%), Positives = 105/190 (55%)
 Frame = +2

Query: 8   LVEAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTD 187
           +V +    NA + Q +E   P    + P    RLPA GI+++PL YH    + +PV  T 
Sbjct: 69  IVSSLDQKNALKDQHFEFFSPSDPTSFPA--DRLPAPGIQILPLRYH----STNPVIAT- 121

Query: 188 QNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFED 367
                          N     G+P+   I+ L+  +YP Y+  +  Y RP+GT +ATF D
Sbjct: 122 ---------------NLVPETGFPLHPLIHYLVYRKYPRYIPYVEKYVRPLGTTDATFSD 166

Query: 368 FNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFK 547
           FN+EQ+  AP+DP+RK  VL     FL   PYLP+HFVD  Y K PL TGTGY NR+S+ 
Sbjct: 167 FNREQVKIAPLDPERKRTVLTLCKHFLACVPYLPIHFVDFMYAKLPLHTGTGYFNRFSYD 226

Query: 548 QKAHAKYSHP 577
            +AHA ++HP
Sbjct: 227 AQAHASFAHP 236

[5][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  134 bits (337), Expect = 5e-30
 Identities = 73/186 (39%), Positives = 100/186 (53%)
 Frame = +2

Query: 14  EAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQN 193
           E Y   NA R++ +E ++P+ D+  P +  R PA GI ++P  YH G +      L D  
Sbjct: 72  ERYTQMNADRNEPFEFYRPLEDNELPDI--RFPAPGITVLPFRYHTGQIVETTDELPDS- 128

Query: 194 RSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFN 373
                              G+ +   I  L   ++  Y   I+ YCRP+GT NATF DFN
Sbjct: 129 -------------------GFSLHPLIDYLTKTKWLHYRPYIDKYCRPLGTTNATFSDFN 169

Query: 374 KEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQK 553
           +EQIPSAPID  RK  VL  +  FL+  P+LP+HFVDT++C TP  T TGY  R+S   +
Sbjct: 170 REQIPSAPIDETRKNMVLPLVIYFLNALPFLPIHFVDTRFCGTPKHTATGYFQRFSTFFR 229

Query: 554 AHAKYS 571
            HA Y+
Sbjct: 230 THAYYA 235

[6][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/168 (38%), Positives = 92/168 (54%)
 Frame = +2

Query: 74  PDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYG 253
           P D   +  +R+P  GI  +P  YH   V                  S +  P      G
Sbjct: 90  PRDIETLPDNRIPPSGIVPLPFEYHRSQVE----------------ISTEEVPET----G 129

Query: 254 YPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAH 433
           + +D RI +++ ++YP+YL  I+ Y RP+GT +AT  DF K Q+PS PI   RK+ +L  
Sbjct: 130 FQIDLRIERILRHKYPQYLPHIHKYVRPLGTTDATVSDFFKPQVPSDPIPEDRKQRILNQ 189

Query: 434 IHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577
           +  FL   P+LPLHF+D+ + KTPL TGTGY NR+SF  + HA +S P
Sbjct: 190 VISFLACTPFLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237

[7][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  117 bits (294), Expect = 5e-25
 Identities = 63/159 (39%), Positives = 88/159 (55%)
 Frame = +2

Query: 101 SRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQ 280
           +R+P  GI  +P  YH   V                  S +  P      G+ +D RI +
Sbjct: 99  NRIPPSGIIPLPYEYHRSQVV----------------ISTEEVPET----GFQIDPRIVR 138

Query: 281 LICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKP 460
           ++  +YP+YL  +  Y RP+GT +AT +DF K QIPS PI   RK+ +L  +  FL   P
Sbjct: 139 ILRNKYPQYLPHVTKYVRPLGTTDATVKDFFKPQIPSDPIPEARKQRILDLVISFLACTP 198

Query: 461 YLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577
           +LPLHF+D+ + KTPL TGTGY NR+SF  + HA +S P
Sbjct: 199 FLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237

[8][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
 Frame = +2

Query: 53  YELHQPIPDDAAPVVPSRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSD 229
           +E ++ + D+   + P+R P+ GI+ +P + YH              N S+D     D  
Sbjct: 51  FEFYKVVSDN---LPPTRAPSIGIESLPNIRYH--------------NHSNDHRYR-DQP 92

Query: 230 PNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQ 409
           P  P     P    + ++I   +P+YL  +  +CRP  + +A FEDFN+ QIPS P+   
Sbjct: 93  PTGP-----PPMRGVRKIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLSYN 147

Query: 410 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574
           RK+ +L  ++ F+  KPY  +HF DT++    L     Y + +S  +K HA+ SH
Sbjct: 148 RKQRILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202

[9][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score = 85.1 bits (209), Expect = 4e-15
 Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
 Frame = +2

Query: 53  YELHQPIPDDAAPVVPSRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSD 229
           +E ++ + D+   + P+R+P+ GI+ +P + YH              N S+D     D  
Sbjct: 51  FEFYKIVSDN---LPPNRVPSAGIESLPNIRYH--------------NHSNDHRYR-DQP 92

Query: 230 PNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQ 409
           P  P     P      ++I   +P+YL  +  +CRP  + +A FEDFN+ QIPS P+   
Sbjct: 93  PTGP-----PPMRGAQRIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLSYN 147

Query: 410 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574
           RK+ +L  ++ F+  KPY  +HF DT++    L     Y + +S  +K HA+ SH
Sbjct: 148 RKQKILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202

[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score = 84.0 bits (206), Expect = 8e-15
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
 Frame = +2

Query: 101 SRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIY 277
           +R P+ GI+ +P + YH              N S+D     D  P  P     P    ++
Sbjct: 64  NRAPSVGIESLPNIRYH--------------NHSNDHRYR-DQPPTGP-----PPMRGVH 103

Query: 278 QLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTK 457
           ++I   +P+YL  +  +CRP  + +A FEDFN+ QIPS P+   RK+ +L  ++ F+  K
Sbjct: 104 RIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLQHSRKQKILKLVNHFMGVK 163

Query: 458 PYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574
           PY  +HF DT++    L     Y + +S  +K HA+ SH
Sbjct: 164 PYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202

[11][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
 Frame = +2

Query: 95  VPS-RLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDS 268
           +PS R+P  GI++   L YH              N  D+      S   +P R       
Sbjct: 57  IPSKRIPKNGIQVFENLKYH-------------TNSKDNLYKDQPSSGPSPMR------- 96

Query: 269 RIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFL 448
            +  +I   +P+YL+ +  +CRP  + ++ F DFN EQ  + P   +R+  +L  I  FL
Sbjct: 97  GVANIIREYFPQYLDDLRTWCRPKSSDDSIFNDFNHEQRITQPFTEERERRLLPLIDHFL 156

Query: 449 DTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577
             KPY  +H+ DT++    L T   Y + +S  +KAHA  SHP
Sbjct: 157 GIKPYDIVHYCDTRFYPWKLSTRADYFHNHSRDRKAHAAKSHP 199

[12][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score = 71.6 bits (174), Expect = 4e-11
 Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
 Frame = +2

Query: 8   LVEAYR---TD-NAKRHQ----VYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVT 163
           L+E YR   TD N K  Q     Y+    +P     +  +R+PA GI+ +P    +    
Sbjct: 34  LLETYRLSSTDGNLKAIQDFVSEYDFQYFMPTGIETLPDNRVPAPGIRALPQFRFH---- 89

Query: 164 HDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIG 343
             PV+  ++ RS               R G+     I  L+   +  Y+ VI+ YCRP G
Sbjct: 90  --PVAALNRFRSIP-------------RTGFNALWTIVNLLATSFMSYVYVISDYCRPAG 134

Query: 344 TVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTG 523
            ++A FE+FN+   P   +  QR   ++  I  FL   P+ P++F D ++ K  LVT   
Sbjct: 135 NIDAIFENFNQAVSPVKDVTSQRLNEIMILIFHFLPIVPHPPVNFPDLRFYKWSLVTSAD 194

Query: 524 YHNRYS 541
           YH  +S
Sbjct: 195 YHAHHS 200