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[1][TOP] >UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides virus China/Mar2007 RepID=A8W7G1_9VIRU Length = 723 Score = 275 bits (703), Expect = 2e-72 Identities = 131/193 (67%), Positives = 147/193 (76%), Gaps = 1/193 (0%) Frame = +2 Query: 2 STLVEAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSL 181 STLVEAYRTDN ++HQ YELHQPIP DAAP++ R PA G+KLVPLMYHYGHV HDP Sbjct: 68 STLVEAYRTDNQQKHQPYELHQPIPADAAPIIDKRQPAPGLKLVPLMYHYGHVIHDP--- 124 Query: 182 TDQNRSDDSATSVDSDPNAPTRYG-YPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNAT 358 DP+ P + YP+DSRIY LI YP YL+V++ YCRPIGTV AT Sbjct: 125 ---------------DPDQPDQTKVYPLDSRIYNLIMSTYPSYLSVLHDYCRPIGTVEAT 169 Query: 359 FEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRY 538 F DFN EQIPSAPID RK+ +L H+ KFLD KPYLP+HFVDTQYCKTPLVTGTGYHNRY Sbjct: 170 FNDFNTEQIPSAPIDEDRKQQILKHLFKFLDVKPYLPIHFVDTQYCKTPLVTGTGYHNRY 229 Query: 539 SFKQKAHAKYSHP 577 SFKQ+AHAKYSHP Sbjct: 230 SFKQRAHAKYSHP 242 [2][TOP] >UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani virus 717 RepID=Q9Q9X2_9VIRU Length = 730 Score = 151 bits (382), Expect = 3e-35 Identities = 75/182 (41%), Positives = 109/182 (59%) Frame = +2 Query: 32 NAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSA 211 NA +++ ++ + + D + R+P GI+LV +H G+V + Q D Sbjct: 85 NAIKNRPFQFYTDLFTDT-DLPTDRIPKPGIELVNAYFHPGNVIRPNPEFSKQLTPDMEL 143 Query: 212 TSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPS 391 +S YG P+D+ + LI +YP+YL+ I YCRP GT +ATF DFNKEQI + Sbjct: 144 DQFESYIPGDIDYGPPIDNELLTLIYRKYPQYLDPITKYCRPAGTTDATFRDFNKEQIKT 203 Query: 392 APIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYS 571 D R N++ IH+F++ PY+PLHFVDT YCK PLVTGTGYHNR+S+ +++ A + Sbjct: 204 EDSDALRLSNIMDLIHEFMNITPYMPLHFVDTFYCKLPLVTGTGYHNRHSYFRRSFAHFC 263 Query: 572 HP 577 HP Sbjct: 264 HP 265 [3][TOP] >UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1 RepID=Q9YX75_9VIRU Length = 673 Score = 144 bits (364), Expect = 4e-33 Identities = 78/191 (40%), Positives = 104/191 (54%), Gaps = 1/191 (0%) Frame = +2 Query: 8 LVEAYRTDNAKRHQVYELHQ-PIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLT 184 ++E ++ H+ Y LH+ PIPDD R+P GIKL+P Y Sbjct: 72 ILEDKQSQQGFPHEYYRLHESPIPDD-------RIPPSGIKLLPFEYK------------ 112 Query: 185 DQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFE 364 S V + P P G+ + RI +L+ +YP+YL + Y RP+GT NAT Sbjct: 113 -------SMNVVTATPEVPES-GFKIHPRIERLLRSKYPQYLQYVRKYTRPLGTTNATVS 164 Query: 365 DFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSF 544 DF K Q PS P++P R +V++H+ K + PYLPLHFVDTQY K PL GTGYHNR S Sbjct: 165 DFFKPQTPSQPVEPTRINHVMSHVMKKMAITPYLPLHFVDTQYDKRPLANGTGYHNRRSH 224 Query: 545 KQKAHAKYSHP 577 + HA +SHP Sbjct: 225 EMNIHALFSHP 235 [4][TOP] >UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa partitivirus V1-1 RepID=Q6BE43_9VIRU Length = 706 Score = 144 bits (362), Expect = 6e-33 Identities = 76/190 (40%), Positives = 105/190 (55%) Frame = +2 Query: 8 LVEAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTD 187 +V + NA + Q +E P + P RLPA GI+++PL YH + +PV T Sbjct: 69 IVSSLDQKNALKDQHFEFFSPSDPTSFPA--DRLPAPGIQILPLRYH----STNPVIAT- 121 Query: 188 QNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFED 367 N G+P+ I+ L+ +YP Y+ + Y RP+GT +ATF D Sbjct: 122 ---------------NLVPETGFPLHPLIHYLVYRKYPRYIPYVEKYVRPLGTTDATFSD 166 Query: 368 FNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFK 547 FN+EQ+ AP+DP+RK VL FL PYLP+HFVD Y K PL TGTGY NR+S+ Sbjct: 167 FNREQVKIAPLDPERKRTVLTLCKHFLACVPYLPIHFVDFMYAKLPLHTGTGYFNRFSYD 226 Query: 548 QKAHAKYSHP 577 +AHA ++HP Sbjct: 227 AQAHASFAHP 236 [5][TOP] >UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix partitivirus 1-W8 RepID=Q50LH7_9VIRU Length = 709 Score = 134 bits (337), Expect = 5e-30 Identities = 73/186 (39%), Positives = 100/186 (53%) Frame = +2 Query: 14 EAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQN 193 E Y NA R++ +E ++P+ D+ P + R PA GI ++P YH G + L D Sbjct: 72 ERYTQMNADRNEPFEFYRPLEDNELPDI--RFPAPGITVLPFRYHTGQIVETTDELPDS- 128 Query: 194 RSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFN 373 G+ + I L ++ Y I+ YCRP+GT NATF DFN Sbjct: 129 -------------------GFSLHPLIDYLTKTKWLHYRPYIDKYCRPLGTTNATFSDFN 169 Query: 374 KEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQK 553 +EQIPSAPID RK VL + FL+ P+LP+HFVDT++C TP T TGY R+S + Sbjct: 170 REQIPSAPIDETRKNMVLPLVIYFLNALPFLPIHFVDTRFCGTPKHTATGYFQRFSTFFR 229 Query: 554 AHAKYS 571 HA Y+ Sbjct: 230 THAYYA 235 [6][TOP] >UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus virus 1 RepID=D0EIN9_9VIRU Length = 502 Score = 122 bits (307), Expect = 2e-26 Identities = 65/168 (38%), Positives = 92/168 (54%) Frame = +2 Query: 74 PDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYG 253 P D + +R+P GI +P YH V S + P G Sbjct: 90 PRDIETLPDNRIPPSGIVPLPFEYHRSQVE----------------ISTEEVPET----G 129 Query: 254 YPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAH 433 + +D RI +++ ++YP+YL I+ Y RP+GT +AT DF K Q+PS PI RK+ +L Sbjct: 130 FQIDLRIERILRHKYPQYLPHIHKYVRPLGTTDATVSDFFKPQVPSDPIPEDRKQRILNQ 189 Query: 434 IHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577 + FL P+LPLHF+D+ + KTPL TGTGY NR+SF + HA +S P Sbjct: 190 VISFLACTPFLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237 [7][TOP] >UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1 RepID=Q5GHF1_9VIRU Length = 706 Score = 117 bits (294), Expect = 5e-25 Identities = 63/159 (39%), Positives = 88/159 (55%) Frame = +2 Query: 101 SRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQ 280 +R+P GI +P YH V S + P G+ +D RI + Sbjct: 99 NRIPPSGIIPLPYEYHRSQVV----------------ISTEEVPET----GFQIDPRIVR 138 Query: 281 LICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKP 460 ++ +YP+YL + Y RP+GT +AT +DF K QIPS PI RK+ +L + FL P Sbjct: 139 ILRNKYPQYLPHVTKYVRPLGTTDATVKDFFKPQIPSDPIPEARKQRILDLVISFLACTP 198 Query: 461 YLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577 +LPLHF+D+ + KTPL TGTGY NR+SF + HA +S P Sbjct: 199 FLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237 [8][TOP] >UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6X9T6_9VIRU Length = 663 Score = 85.1 bits (209), Expect = 4e-15 Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%) Frame = +2 Query: 53 YELHQPIPDDAAPVVPSRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSD 229 +E ++ + D+ + P+R P+ GI+ +P + YH N S+D D Sbjct: 51 FEFYKVVSDN---LPPTRAPSIGIESLPNIRYH--------------NHSNDHRYR-DQP 92 Query: 230 PNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQ 409 P P P + ++I +P+YL + +CRP + +A FEDFN+ QIPS P+ Sbjct: 93 PTGP-----PPMRGVRKIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLSYN 147 Query: 410 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574 RK+ +L ++ F+ KPY +HF DT++ L Y + +S +K HA+ SH Sbjct: 148 RKQRILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202 [9][TOP] >UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica partitivirus RepID=Q6EM35_9VIRU Length = 663 Score = 85.1 bits (209), Expect = 4e-15 Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%) Frame = +2 Query: 53 YELHQPIPDDAAPVVPSRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSD 229 +E ++ + D+ + P+R+P+ GI+ +P + YH N S+D D Sbjct: 51 FEFYKIVSDN---LPPNRVPSAGIESLPNIRYH--------------NHSNDHRYR-DQP 92 Query: 230 PNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQ 409 P P P ++I +P+YL + +CRP + +A FEDFN+ QIPS P+ Sbjct: 93 PTGP-----PPMRGAQRIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLSYN 147 Query: 410 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574 RK+ +L ++ F+ KPY +HF DT++ L Y + +S +K HA+ SH Sbjct: 148 RKQKILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202 [10][TOP] >UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus 1 RepID=Q5DM90_9VIRU Length = 663 Score = 84.0 bits (206), Expect = 8e-15 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 1/159 (0%) Frame = +2 Query: 101 SRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIY 277 +R P+ GI+ +P + YH N S+D D P P P ++ Sbjct: 64 NRAPSVGIESLPNIRYH--------------NHSNDHRYR-DQPPTGP-----PPMRGVH 103 Query: 278 QLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTK 457 ++I +P+YL + +CRP + +A FEDFN+ QIPS P+ RK+ +L ++ F+ K Sbjct: 104 RIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLQHSRKQKILKLVNHFMGVK 163 Query: 458 PYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574 PY +HF DT++ L Y + +S +K HA+ SH Sbjct: 164 PYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202 [11][TOP] >UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella hypoxylon virus RepID=Q85055_AHV Length = 665 Score = 73.2 bits (178), Expect = 1e-11 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 2/163 (1%) Frame = +2 Query: 95 VPS-RLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDS 268 +PS R+P GI++ L YH N D+ S +P R Sbjct: 57 IPSKRIPKNGIQVFENLKYH-------------TNSKDNLYKDQPSSGPSPMR------- 96 Query: 269 RIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFL 448 + +I +P+YL+ + +CRP + ++ F DFN EQ + P +R+ +L I FL Sbjct: 97 GVANIIREYFPQYLDDLRTWCRPKSSDDSIFNDFNHEQRITQPFTEERERRLLPLIDHFL 156 Query: 449 DTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577 KPY +H+ DT++ L T Y + +S +KAHA SHP Sbjct: 157 GIKPYDIVHYCDTRFYPWKLSTRADYFHNHSRDRKAHAAKSHP 199 [12][TOP] >UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion annosum P-type partitivirus RepID=Q8QY51_9VIRU Length = 734 Score = 71.6 bits (174), Expect = 4e-11 Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 8/186 (4%) Frame = +2 Query: 8 LVEAYR---TD-NAKRHQ----VYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVT 163 L+E YR TD N K Q Y+ +P + +R+PA GI+ +P + Sbjct: 34 LLETYRLSSTDGNLKAIQDFVSEYDFQYFMPTGIETLPDNRVPAPGIRALPQFRFH---- 89 Query: 164 HDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIG 343 PV+ ++ RS R G+ I L+ + Y+ VI+ YCRP G Sbjct: 90 --PVAALNRFRSIP-------------RTGFNALWTIVNLLATSFMSYVYVISDYCRPAG 134 Query: 344 TVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTG 523 ++A FE+FN+ P + QR ++ I FL P+ P++F D ++ K LVT Sbjct: 135 NIDAIFENFNQAVSPVKDVTSQRLNEIMILIFHFLPIVPHPPVNFPDLRFYKWSLVTSAD 194 Query: 524 YHNRYS 541 YH +S Sbjct: 195 YHAHHS 200