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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 275 bits (703), Expect = 2e-72
Identities = 131/193 (67%), Positives = 147/193 (76%), Gaps = 1/193 (0%)
Frame = +2
Query: 2 STLVEAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSL 181
STLVEAYRTDN ++HQ YELHQPIP DAAP++ R PA G+KLVPLMYHYGHV HDP
Sbjct: 68 STLVEAYRTDNQQKHQPYELHQPIPADAAPIIDKRQPAPGLKLVPLMYHYGHVIHDP--- 124
Query: 182 TDQNRSDDSATSVDSDPNAPTRYG-YPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNAT 358
DP+ P + YP+DSRIY LI YP YL+V++ YCRPIGTV AT
Sbjct: 125 ---------------DPDQPDQTKVYPLDSRIYNLIMSTYPSYLSVLHDYCRPIGTVEAT 169
Query: 359 FEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRY 538
F DFN EQIPSAPID RK+ +L H+ KFLD KPYLP+HFVDTQYCKTPLVTGTGYHNRY
Sbjct: 170 FNDFNTEQIPSAPIDEDRKQQILKHLFKFLDVKPYLPIHFVDTQYCKTPLVTGTGYHNRY 229
Query: 539 SFKQKAHAKYSHP 577
SFKQ+AHAKYSHP
Sbjct: 230 SFKQRAHAKYSHP 242
[2][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 151 bits (382), Expect = 3e-35
Identities = 75/182 (41%), Positives = 109/182 (59%)
Frame = +2
Query: 32 NAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSA 211
NA +++ ++ + + D + R+P GI+LV +H G+V + Q D
Sbjct: 85 NAIKNRPFQFYTDLFTDT-DLPTDRIPKPGIELVNAYFHPGNVIRPNPEFSKQLTPDMEL 143
Query: 212 TSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPS 391
+S YG P+D+ + LI +YP+YL+ I YCRP GT +ATF DFNKEQI +
Sbjct: 144 DQFESYIPGDIDYGPPIDNELLTLIYRKYPQYLDPITKYCRPAGTTDATFRDFNKEQIKT 203
Query: 392 APIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYS 571
D R N++ IH+F++ PY+PLHFVDT YCK PLVTGTGYHNR+S+ +++ A +
Sbjct: 204 EDSDALRLSNIMDLIHEFMNITPYMPLHFVDTFYCKLPLVTGTGYHNRHSYFRRSFAHFC 263
Query: 572 HP 577
HP
Sbjct: 264 HP 265
[3][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 144 bits (364), Expect = 4e-33
Identities = 78/191 (40%), Positives = 104/191 (54%), Gaps = 1/191 (0%)
Frame = +2
Query: 8 LVEAYRTDNAKRHQVYELHQ-PIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLT 184
++E ++ H+ Y LH+ PIPDD R+P GIKL+P Y
Sbjct: 72 ILEDKQSQQGFPHEYYRLHESPIPDD-------RIPPSGIKLLPFEYK------------ 112
Query: 185 DQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFE 364
S V + P P G+ + RI +L+ +YP+YL + Y RP+GT NAT
Sbjct: 113 -------SMNVVTATPEVPES-GFKIHPRIERLLRSKYPQYLQYVRKYTRPLGTTNATVS 164
Query: 365 DFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSF 544
DF K Q PS P++P R +V++H+ K + PYLPLHFVDTQY K PL GTGYHNR S
Sbjct: 165 DFFKPQTPSQPVEPTRINHVMSHVMKKMAITPYLPLHFVDTQYDKRPLANGTGYHNRRSH 224
Query: 545 KQKAHAKYSHP 577
+ HA +SHP
Sbjct: 225 EMNIHALFSHP 235
[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 144 bits (362), Expect = 6e-33
Identities = 76/190 (40%), Positives = 105/190 (55%)
Frame = +2
Query: 8 LVEAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTD 187
+V + NA + Q +E P + P RLPA GI+++PL YH + +PV T
Sbjct: 69 IVSSLDQKNALKDQHFEFFSPSDPTSFPA--DRLPAPGIQILPLRYH----STNPVIAT- 121
Query: 188 QNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFED 367
N G+P+ I+ L+ +YP Y+ + Y RP+GT +ATF D
Sbjct: 122 ---------------NLVPETGFPLHPLIHYLVYRKYPRYIPYVEKYVRPLGTTDATFSD 166
Query: 368 FNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFK 547
FN+EQ+ AP+DP+RK VL FL PYLP+HFVD Y K PL TGTGY NR+S+
Sbjct: 167 FNREQVKIAPLDPERKRTVLTLCKHFLACVPYLPIHFVDFMYAKLPLHTGTGYFNRFSYD 226
Query: 548 QKAHAKYSHP 577
+AHA ++HP
Sbjct: 227 AQAHASFAHP 236
[5][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 134 bits (337), Expect = 5e-30
Identities = 73/186 (39%), Positives = 100/186 (53%)
Frame = +2
Query: 14 EAYRTDNAKRHQVYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQN 193
E Y NA R++ +E ++P+ D+ P + R PA GI ++P YH G + L D
Sbjct: 72 ERYTQMNADRNEPFEFYRPLEDNELPDI--RFPAPGITVLPFRYHTGQIVETTDELPDS- 128
Query: 194 RSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFN 373
G+ + I L ++ Y I+ YCRP+GT NATF DFN
Sbjct: 129 -------------------GFSLHPLIDYLTKTKWLHYRPYIDKYCRPLGTTNATFSDFN 169
Query: 374 KEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQK 553
+EQIPSAPID RK VL + FL+ P+LP+HFVDT++C TP T TGY R+S +
Sbjct: 170 REQIPSAPIDETRKNMVLPLVIYFLNALPFLPIHFVDTRFCGTPKHTATGYFQRFSTFFR 229
Query: 554 AHAKYS 571
HA Y+
Sbjct: 230 THAYYA 235
[6][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 122 bits (307), Expect = 2e-26
Identities = 65/168 (38%), Positives = 92/168 (54%)
Frame = +2
Query: 74 PDDAAPVVPSRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYG 253
P D + +R+P GI +P YH V S + P G
Sbjct: 90 PRDIETLPDNRIPPSGIVPLPFEYHRSQVE----------------ISTEEVPET----G 129
Query: 254 YPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAH 433
+ +D RI +++ ++YP+YL I+ Y RP+GT +AT DF K Q+PS PI RK+ +L
Sbjct: 130 FQIDLRIERILRHKYPQYLPHIHKYVRPLGTTDATVSDFFKPQVPSDPIPEDRKQRILNQ 189
Query: 434 IHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577
+ FL P+LPLHF+D+ + KTPL TGTGY NR+SF + HA +S P
Sbjct: 190 VISFLACTPFLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237
[7][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 117 bits (294), Expect = 5e-25
Identities = 63/159 (39%), Positives = 88/159 (55%)
Frame = +2
Query: 101 SRLPAKGIKLVPLMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQ 280
+R+P GI +P YH V S + P G+ +D RI +
Sbjct: 99 NRIPPSGIIPLPYEYHRSQVV----------------ISTEEVPET----GFQIDPRIVR 138
Query: 281 LICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKP 460
++ +YP+YL + Y RP+GT +AT +DF K QIPS PI RK+ +L + FL P
Sbjct: 139 ILRNKYPQYLPHVTKYVRPLGTTDATVKDFFKPQIPSDPIPEARKQRILDLVISFLACTP 198
Query: 461 YLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577
+LPLHF+D+ + KTPL TGTGY NR+SF + HA +S P
Sbjct: 199 FLPLHFIDSLWDKTPLHTGTGYFNRHSFAARIHAMFSAP 237
[8][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 85.1 bits (209), Expect = 4e-15
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Frame = +2
Query: 53 YELHQPIPDDAAPVVPSRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSD 229
+E ++ + D+ + P+R P+ GI+ +P + YH N S+D D
Sbjct: 51 FEFYKVVSDN---LPPTRAPSIGIESLPNIRYH--------------NHSNDHRYR-DQP 92
Query: 230 PNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQ 409
P P P + ++I +P+YL + +CRP + +A FEDFN+ QIPS P+
Sbjct: 93 PTGP-----PPMRGVRKIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLSYN 147
Query: 410 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574
RK+ +L ++ F+ KPY +HF DT++ L Y + +S +K HA+ SH
Sbjct: 148 RKQRILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202
[9][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 85.1 bits (209), Expect = 4e-15
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
Frame = +2
Query: 53 YELHQPIPDDAAPVVPSRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSD 229
+E ++ + D+ + P+R+P+ GI+ +P + YH N S+D D
Sbjct: 51 FEFYKIVSDN---LPPNRVPSAGIESLPNIRYH--------------NHSNDHRYR-DQP 92
Query: 230 PNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQ 409
P P P ++I +P+YL + +CRP + +A FEDFN+ QIPS P+
Sbjct: 93 PTGP-----PPMRGAQRIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLSYN 147
Query: 410 RKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574
RK+ +L ++ F+ KPY +HF DT++ L Y + +S +K HA+ SH
Sbjct: 148 RKQKILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 84.0 bits (206), Expect = 8e-15
Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Frame = +2
Query: 101 SRLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIY 277
+R P+ GI+ +P + YH N S+D D P P P ++
Sbjct: 64 NRAPSVGIESLPNIRYH--------------NHSNDHRYR-DQPPTGP-----PPMRGVH 103
Query: 278 QLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTK 457
++I +P+YL + +CRP + +A FEDFN+ QIPS P+ RK+ +L ++ F+ K
Sbjct: 104 RIINDSFPQYLPYLKEWCRPKTSSDAIFEDFNQPQIPSIPLQHSRKQKILKLVNHFMGVK 163
Query: 458 PYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSH 574
PY +HF DT++ L Y + +S +K HA+ SH
Sbjct: 164 PYDIVHFCDTRFYPWDLSKKADYFHNHSNARKRHAQTSH 202
[11][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 73.2 bits (178), Expect = 1e-11
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Frame = +2
Query: 95 VPS-RLPAKGIKLVP-LMYHYGHVTHDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDS 268
+PS R+P GI++ L YH N D+ S +P R
Sbjct: 57 IPSKRIPKNGIQVFENLKYH-------------TNSKDNLYKDQPSSGPSPMR------- 96
Query: 269 RIYQLICYRYPEYLNVINAYCRPIGTVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFL 448
+ +I +P+YL+ + +CRP + ++ F DFN EQ + P +R+ +L I FL
Sbjct: 97 GVANIIREYFPQYLDDLRTWCRPKSSDDSIFNDFNHEQRITQPFTEERERRLLPLIDHFL 156
Query: 449 DTKPYLPLHFVDTQYCKTPLVTGTGYHNRYSFKQKAHAKYSHP 577
KPY +H+ DT++ L T Y + +S +KAHA SHP
Sbjct: 157 GIKPYDIVHYCDTRFYPWKLSTRADYFHNHSRDRKAHAAKSHP 199
[12][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 71.6 bits (174), Expect = 4e-11
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Frame = +2
Query: 8 LVEAYR---TD-NAKRHQ----VYELHQPIPDDAAPVVPSRLPAKGIKLVPLMYHYGHVT 163
L+E YR TD N K Q Y+ +P + +R+PA GI+ +P +
Sbjct: 34 LLETYRLSSTDGNLKAIQDFVSEYDFQYFMPTGIETLPDNRVPAPGIRALPQFRFH---- 89
Query: 164 HDPVSLTDQNRSDDSATSVDSDPNAPTRYGYPVDSRIYQLICYRYPEYLNVINAYCRPIG 343
PV+ ++ RS R G+ I L+ + Y+ VI+ YCRP G
Sbjct: 90 --PVAALNRFRSIP-------------RTGFNALWTIVNLLATSFMSYVYVISDYCRPAG 134
Query: 344 TVNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTG 523
++A FE+FN+ P + QR ++ I FL P+ P++F D ++ K LVT
Sbjct: 135 NIDAIFENFNQAVSPVKDVTSQRLNEIMILIFHFLPIVPHPPVNFPDLRFYKWSLVTSAD 194
Query: 524 YHNRYS 541
YH +S
Sbjct: 195 YHAHHS 200