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[1][TOP]
>UniRef100_Q2PEW4 Putative uncharacterized protein (Fragment) n=1 Tax=Trifolium
pratense RepID=Q2PEW4_TRIPR
Length = 402
Score = 380 bits (977), Expect = e-104
Identities = 191/203 (94%), Positives = 191/203 (94%), Gaps = 12/203 (5%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP
Sbjct: 139 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 198
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR
Sbjct: 199 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 258
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRT------------GGDDWSSGGRRSGGDDW 505
PPPMEDLPELPTRQVVSTLGRDRSNQRGYRT GGDDWSSGGRRSGGDDW
Sbjct: 259 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRSGGDDW 318
Query: 506 SSGGRRPGGDDWSTEGRRSNGYS 574
SSGGRRPGGDDWSTEGRRSNGYS
Sbjct: 319 SSGGRRPGGDDWSTEGRRSNGYS 341
[2][TOP]
>UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR
Length = 735
Score = 222 bits (566), Expect = 1e-56
Identities = 110/139 (79%), Positives = 125/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TRTKRDADE+S +LT SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP
Sbjct: 352 TRTKRDADEVSMALTQSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 411
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGKEG A++MFT SQ+RTV SLERD G +FEF+
Sbjct: 412 NVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVS 471
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +E+L E T QVV+TL
Sbjct: 472 PPAIEELLESSTEQVVATL 490
[3][TOP]
>UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984A30
Length = 764
Score = 220 bits (560), Expect = 7e-56
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 372 TQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 431
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERDVG +FEFI
Sbjct: 432 NVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFIS 491
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +E++ E QVV+TL
Sbjct: 492 PPAIEEVLESSAEQVVATL 510
[4][TOP]
>UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9RFT3_RICCO
Length = 772
Score = 220 bits (560), Expect = 7e-56
Identities = 110/151 (72%), Positives = 128/151 (84%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP
Sbjct: 374 TQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 433
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYELP+ PETFVHRSGRTGRAGKEG AV+MFT+SQ+RTV SLERDVG RFEF+
Sbjct: 434 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTSSQRRTVKSLERDVGCRFEFVS 493
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRT 454
PP E++ E QV++TL G+ T
Sbjct: 494 PPGTEEVLESSAEQVIATLSGVHPESVGFFT 524
[5][TOP]
>UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PRF1_VITVI
Length = 762
Score = 220 bits (560), Expect = 7e-56
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 365 TQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 424
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERDVG +FEFI
Sbjct: 425 NVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFIS 484
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +E++ E QVV+TL
Sbjct: 485 PPAIEEVLESSAEQVVATL 503
[6][TOP]
>UniRef100_B7EBF8 cDNA clone:J013043E01, full insert sequence n=3 Tax=Oryza sativa
Japonica Group RepID=B7EBF8_ORYSJ
Length = 597
Score = 216 bits (550), Expect = 1e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 197 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 256
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI
Sbjct: 257 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 316
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +ED+ E V++TL
Sbjct: 317 PPAIEDVLESSAEHVIATL 335
[7][TOP]
>UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AMQ6_ORYSI
Length = 779
Score = 216 bits (550), Expect = 1e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 379 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 438
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI
Sbjct: 439 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 498
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +ED+ E V++TL
Sbjct: 499 PPAIEDVLESSAEHVIATL 517
[8][TOP]
>UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE
Length = 744
Score = 216 bits (550), Expect = 1e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TRTK+DADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 342 TRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 401
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT+SQKRTV SLERDVG FEFI
Sbjct: 402 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFIS 461
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +E++ E V++TL
Sbjct: 462 PPSIEEVLESSAEHVIATL 480
[9][TOP]
>UniRef100_B4FA24 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FA24_MAIZE
Length = 598
Score = 216 bits (550), Expect = 1e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TRTK+DADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 197 TRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 256
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT+SQKRTV SLERDVG FEFI
Sbjct: 257 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFIS 316
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +E++ E V++TL
Sbjct: 317 PPSIEEVLESSAEHVIATL 335
[10][TOP]
>UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0DM51-3
Length = 757
Score = 216 bits (550), Expect = 1e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 358 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 417
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI
Sbjct: 418 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 477
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +ED+ E V++TL
Sbjct: 478 PPAIEDVLESSAEHVIATL 496
[11][TOP]
>UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica
Group RepID=RH3_ORYSJ
Length = 758
Score = 216 bits (550), Expect = 1e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 358 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 417
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI
Sbjct: 418 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 477
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +ED+ E V++TL
Sbjct: 478 PPAIEDVLESSAEHVIATL 496
[12][TOP]
>UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare
RepID=Q6L724_HORVU
Length = 764
Score = 216 bits (549), Expect = 1e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TRTKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP
Sbjct: 345 TRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 404
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT +Q+RTV SLERDVG +FEFI
Sbjct: 405 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTTNQRRTVKSLERDVGCKFEFIG 464
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP ME++ + V++TL
Sbjct: 465 PPTMEEVLDSSAEHVIATL 483
[13][TOP]
>UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR
Length = 775
Score = 215 bits (547), Expect = 2e-54
Identities = 105/139 (75%), Positives = 125/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT++IAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP
Sbjct: 389 TQTKRDADEVSMALTNTIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 448
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ ETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERD G +FEF+
Sbjct: 449 NVDLIIHYELPNDAETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVS 508
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +E++ E QVV+TL
Sbjct: 509 PPAIEEVLESSAEQVVATL 527
[14][TOP]
>UniRef100_A9PJW0 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW0_9ROSI
Length = 481
Score = 215 bits (547), Expect = 2e-54
Identities = 105/139 (75%), Positives = 125/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT++IAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP
Sbjct: 95 TQTKRDADEVSMALTNTIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 154
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ ETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERD G +FEF+
Sbjct: 155 NVDLIIHYELPNDAETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVS 214
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP +E++ E QVV+TL
Sbjct: 215 PPAIEEVLESSAEQVVATL 233
[15][TOP]
>UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago
truncatula RepID=Q2HUZ8_MEDTR
Length = 753
Score = 213 bits (543), Expect = 6e-54
Identities = 106/139 (76%), Positives = 122/139 (87%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SI S+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP
Sbjct: 362 TQTKRDADEVSLALTNSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 421
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG +FEF+
Sbjct: 422 NVDLIIHYELPNDPETFVHRSGRTGRAGKLGTAILMFTGSQRRTVRSLERDVGCKFEFVN 481
Query: 362 PPPMEDLPELPTRQVVSTL 418
P +ED+ E QVV TL
Sbjct: 482 APSVEDVLESSAEQVVVTL 500
[16][TOP]
>UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1
Tax=Arabidopsis thaliana RepID=Q8L7S8-2
Length = 747
Score = 213 bits (542), Expect = 8e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +L++SIA++ALHGDISQ+QRERTL+ FRQG+FTVLVATDVASRGLDIP
Sbjct: 358 TQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIP 417
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYELP+ PETFVHRSGRTGRAGKEG+A++M T+SQKRTV SLERDVG FEFI
Sbjct: 418 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFIS 477
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP + DL E QVV+TL
Sbjct: 478 PPTVGDLLESSADQVVATL 496
[17][TOP]
>UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana
RepID=RH3_ARATH
Length = 748
Score = 213 bits (542), Expect = 8e-54
Identities = 106/139 (76%), Positives = 124/139 (89%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +L++SIA++ALHGDISQ+QRERTL+ FRQG+FTVLVATDVASRGLDIP
Sbjct: 358 TQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIP 417
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYELP+ PETFVHRSGRTGRAGKEG+A++M T+SQKRTV SLERDVG FEFI
Sbjct: 418 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFIS 477
Query: 362 PPPMEDLPELPTRQVVSTL 418
PP + DL E QVV+TL
Sbjct: 478 PPTVGDLLESSADQVVATL 496
[18][TOP]
>UniRef100_A5C4J0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C4J0_VITVI
Length = 786
Score = 212 bits (540), Expect = 1e-53
Identities = 108/148 (72%), Positives = 127/148 (85%), Gaps = 9/148 (6%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP
Sbjct: 410 TQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 469
Query: 182 NVDL---------IIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERD 334
NVDL IIHYELP+ PETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERD
Sbjct: 470 NVDLKYVDLLFLQIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERD 529
Query: 335 VGSRFEFIRPPPMEDLPELPTRQVVSTL 418
VG +FEFI PP +E++ E QVV+TL
Sbjct: 530 VGCKFEFISPPAIEEVLESSAEQVVATL 557
[19][TOP]
>UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LKW8_PICSI
Length = 802
Score = 194 bits (493), Expect = 4e-48
Identities = 95/140 (67%), Positives = 115/140 (82%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADEIS L+S+IA +ALHGDISQ+QRERTL GFR+G+F+ LVATDVA+RGLDI
Sbjct: 402 TQTKRDADEISLGLSSTIACEALHGDISQHQRERTLAGFREGKFSALVATDVAARGLDIT 461
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYE P+ PETFVHRSGRTGRAGKEG A++M+ ++ KR V SLE +VG RFE+I
Sbjct: 462 NVDLVIHYEFPNDPETFVHRSGRTGRAGKEGIAILMYPSNGKRKVRSLEHEVGCRFEYIN 521
Query: 362 PPPMEDLPELPTRQVVSTLG 421
PP ED+ E T+ V LG
Sbjct: 522 PPRQEDVLETSTQHVAKALG 541
[20][TOP]
>UniRef100_Q9LUW5 DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Arabidopsis thaliana
RepID=RH53_ARATH
Length = 616
Score = 179 bits (454), Expect = 1e-43
Identities = 100/194 (51%), Positives = 127/194 (65%), Gaps = 3/194 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD +SY+L S +ALHGDISQ QRERTL GFR G F +LVATDVA+RGLD+P
Sbjct: 356 TQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVP 415
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ ETFVHR+GRTGRAGK+G+A+++++ Q R V +ER+VGSRF
Sbjct: 416 NVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRF---- 471
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGG---DDWSSGGRRSGGDDWSSGGRRPGG 532
+LP + + +++ ++ G GG D SS G RSGG + G GG
Sbjct: 472 ----TELPSIAVERGSASMFEGIGSRSGGSFGGGMRDRGSSFGGRSGGGGY---GGSSGG 524
Query: 533 DDWSTEGRRSNGYS 574
G SN YS
Sbjct: 525 YGGGRSGGSSNRYS 538
[21][TOP]
>UniRef100_C5YRW1 Putative uncharacterized protein Sb08g021180 n=1 Tax=Sorghum
bicolor RepID=C5YRW1_SORBI
Length = 618
Score = 178 bits (451), Expect = 3e-43
Identities = 102/195 (52%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD +S+S++ S +ALHGDISQ QRERTL GFR GRF +L+ATDVA+RGLDIP
Sbjct: 349 TQTKRDADRLSHSMSRSFQCEALHGDISQSQRERTLGGFRDGRFNILIATDVAARGLDIP 408
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYELP+ E FVHRSGRTGRAGK+G A+VM+ Q R V +ERDVG +F
Sbjct: 409 NVDLVIHYELPNSSEIFVHRSGRTGRAGKKGTAIVMYNYEQSRAVRVIERDVGCKF---- 464
Query: 362 PPPMEDLPELPTR-QVVSTLGRDRSNQRGYRTGGDDWSS----GGRRSGGDDWSSGGRRP 526
+LP++ V+ G D G GG ++ GGR GG S GG
Sbjct: 465 ----TELPKINVEGSVLLDAGFDSFGGGGGGYGGSNYGRSRGFGGRGGGGFGRSGGG--- 517
Query: 527 GGDDWSTEGRRSNGY 571
GG S GR S G+
Sbjct: 518 GGFGNSGFGRSSGGF 532
[22][TOP]
>UniRef100_A9S7H7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S7H7_PHYPA
Length = 689
Score = 177 bits (450), Expect = 4e-43
Identities = 82/141 (58%), Positives = 114/141 (80%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD+++ L ++ +ALHGDI+Q QRERTL FR+GRF+VLVATDVA+RGLDIP
Sbjct: 303 TQTKRDADDVASVLGRTLGCEALHGDITQSQRERTLASFREGRFSVLVATDVAARGLDIP 362
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL++HYE+P+ PETFVHRSGRTGRAGK+G A++MF+ +QKRT+ ++E DVG +F +
Sbjct: 363 NVDLVVHYEIPNDPETFVHRSGRTGRAGKDGTAILMFSENQKRTMRNIEMDVGCKFTLMS 422
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
PP ME++ + ++ + + R
Sbjct: 423 PPQMEEVLQASSKAAKAVIQR 443
[23][TOP]
>UniRef100_Q9LUW6 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Arabidopsis thaliana
RepID=RH9_ARATH
Length = 610
Score = 174 bits (440), Expect = 6e-42
Identities = 97/196 (49%), Positives = 125/196 (63%), Gaps = 5/196 (2%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD +++ L S +ALHGDISQ QRERTL GFR G F++LVATDVA+RGLD+P
Sbjct: 368 TQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVP 427
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYELP+ ETFVHR+GRTGRAGK+G+A+++ Q R V +E++VGSRF +
Sbjct: 428 NVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELP 487
Query: 362 PPPME----DLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRSGGDDWSSGGRRP 526
+E + E + + G RS GY + G SGG GG SSG
Sbjct: 488 SIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGSYGGYGGSSGRSGG 547
Query: 527 GGDDWSTEGRRSNGYS 574
GG + G S+ YS
Sbjct: 548 GGGSYGGSGGSSSRYS 563
[24][TOP]
>UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RFR6_PHYPA
Length = 793
Score = 172 bits (437), Expect = 1e-41
Identities = 81/141 (57%), Positives = 110/141 (78%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD+++ ++ ++ +ALHGDISQ QRE+TL+ FR+G F+VLVATDVA+RGLDIP
Sbjct: 393 TQTKRDADDVATAMARTLGCEALHGDISQSQREKTLNAFREGNFSVLVATDVAARGLDIP 452
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYE+P+ PETFVHRSGRTGRAGK+G A++M++ Q RT+ +ERDVG +F I
Sbjct: 453 NVDLVIHYEIPNDPETFVHRSGRTGRAGKDGTAILMYSDRQTRTMRLIERDVGCKFTKIS 512
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
P +ED+ + T + R
Sbjct: 513 APRVEDVLKASTESATDVIKR 533
[25][TOP]
>UniRef100_UPI00019844A0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI00019844A0
Length = 666
Score = 170 bits (431), Expect = 6e-41
Identities = 98/191 (51%), Positives = 118/191 (61%), Gaps = 6/191 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD ++Y++ + +ALHGDISQ QRERTL GFR G F VLVATDVA+RGLDIP
Sbjct: 367 TQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIP 426
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ E FVHRSGRTGRAGK+G A++++ Q RTV +ERD+G +F
Sbjct: 427 NVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFS--- 483
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR------R 523
ELP R + RD + G G + S G R GG GR R
Sbjct: 484 --------ELP-RIAIEGGSRDMFSDMGGGGDGGRFGSFGSRGGGRVGGGFGRSGSSFGR 534
Query: 524 PGGDDWSTEGR 556
GG S GR
Sbjct: 535 SGGYGESGSGR 545
[26][TOP]
>UniRef100_A5AH66 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5AH66_VITVI
Length = 666
Score = 170 bits (431), Expect = 6e-41
Identities = 98/191 (51%), Positives = 118/191 (61%), Gaps = 6/191 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD ++Y++ + +ALHGDISQ QRERTL GFR G F VLVATDVA+RGLDIP
Sbjct: 367 TQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIP 426
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHYELP+ E FVHRSGRTGRAGK+G A++++ Q RTV +ERD+G +F
Sbjct: 427 NVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFS--- 483
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR------R 523
ELP R + RD + G G + S G R GG GR R
Sbjct: 484 --------ELP-RIAIEGGSRDMLSDMGGGGDGGRFGSFGSRGGGRVGGGFGRSGSSFGR 534
Query: 524 PGGDDWSTEGR 556
GG S GR
Sbjct: 535 SGGYGESGSGR 545
[27][TOP]
>UniRef100_C5X9H0 Putative uncharacterized protein Sb02g002790 n=1 Tax=Sorghum
bicolor RepID=C5X9H0_SORBI
Length = 602
Score = 169 bits (429), Expect = 1e-40
Identities = 92/189 (48%), Positives = 119/189 (62%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD ++Y + S +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP
Sbjct: 337 TQTKRDADRLAYVMGRSYPCQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 396
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL++HYE+P+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G RF +
Sbjct: 397 NVDLVVHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELP 456
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
P+ D + + RS G R G +S G GD SS GG
Sbjct: 457 KMPVSD----EAADMFNVTRDTRSRSAGSRRTGGPFSREGYGGFGDHRSSSFGDFGGSSD 512
Query: 542 STEGRRSNG 568
+ G R +G
Sbjct: 513 RSGGFRDSG 521
[28][TOP]
>UniRef100_C0P7U9 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0P7U9_MAIZE
Length = 483
Score = 168 bits (426), Expect = 2e-40
Identities = 98/190 (51%), Positives = 121/190 (63%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD +S++++ S +ALHGDISQ QRERTL GFR GRF +L+ATDVA+RGLDIP
Sbjct: 217 TQTKRDADRLSHNMSRSFQCEALHGDISQSQRERTLAGFRDGRFNILIATDVAARGLDIP 276
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM+ Q R V +ERDVG +F
Sbjct: 277 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGTAIVMYNYDQSRAVRVIERDVGCKF---- 332
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
+LP++ G S GY +G + SGG G SGG GG
Sbjct: 333 ----TELPKITVDGSDLLSGGFDSFGGGY-SGSNYGRSGGFGGRGGFGRSGG--GGGYGN 385
Query: 542 STEGRRSNGY 571
S G S GY
Sbjct: 386 SGFGHSSGGY 395
[29][TOP]
>UniRef100_UPI0000E129C8 Os07g0143700 n=1 Tax=Oryza sativa Japonica Group
RepID=UPI0000E129C8
Length = 292
Score = 167 bits (424), Expect = 4e-40
Identities = 96/200 (48%), Positives = 127/200 (63%), Gaps = 10/200 (5%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKR+AD ++Y++ S A +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP
Sbjct: 25 TQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 84
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYELP+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G +F +
Sbjct: 85 NVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTEL- 143
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGY-RTGGDDWSSG-------GRRSGGDDWSSGG 517
P +E E + + + +RS G RTGG + G GR G D+ G
Sbjct: 144 -PKIEVADE--ASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDGFG 200
Query: 518 RRP--GGDDWSTEGRRSNGY 571
P GG R +G+
Sbjct: 201 SSPNRGGRSRDAGSRYGSGF 220
[30][TOP]
>UniRef100_Q0D8N0 DEAD-box ATP-dependent RNA helicase 53 n=3 Tax=Oryza sativa
RepID=RH53_ORYSJ
Length = 602
Score = 167 bits (424), Expect = 4e-40
Identities = 96/200 (48%), Positives = 127/200 (63%), Gaps = 10/200 (5%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKR+AD ++Y++ S A +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP
Sbjct: 335 TQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 394
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYELP+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G +F +
Sbjct: 395 NVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTEL- 453
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGY-RTGGDDWSSG-------GRRSGGDDWSSGG 517
P +E E + + + +RS G RTGG + G GR G D+ G
Sbjct: 454 -PKIEVADE--ASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDGFG 510
Query: 518 RRP--GGDDWSTEGRRSNGY 571
P GG R +G+
Sbjct: 511 SSPNRGGRSRDAGSRYGSGF 530
[31][TOP]
>UniRef100_B9IHF6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IHF6_POPTR
Length = 551
Score = 167 bits (422), Expect = 7e-40
Identities = 96/199 (48%), Positives = 124/199 (62%), Gaps = 8/199 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TKRDAD ++Y++ + +ALHGDISQ RERTL GFR+G F +LVATDVA+RGLD+P
Sbjct: 294 TETKRDADRLAYAMAKTYKCEALHGDISQSVRERTLSGFREGHFNILVATDVAARGLDVP 353
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHY LP ETFVHRSGRTGRAGK+G A++++T + R V +ERD G +F
Sbjct: 354 NVDLIIHYALPRCSETFVHRSGRTGRAGKKGTAILIYTQDESRQVRIIERDTGCKF---- 409
Query: 362 PPPMEDLPEL----PTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG-GRRP 526
+LP++ + + + +GR R N G G D GGR G ++ SG G R
Sbjct: 410 ----LELPKIAVDGESIDMYNDMGRGRFNSFGSPRGFGD---GGRYGGQGNYGSGQGFRN 462
Query: 527 GG---DDWSTEGRRSNGYS 574
G D G NGY+
Sbjct: 463 SGFGRSDGQFSGSSRNGYN 481
[32][TOP]
>UniRef100_B9HDF9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HDF9_POPTR
Length = 556
Score = 165 bits (417), Expect = 3e-39
Identities = 91/175 (52%), Positives = 115/175 (65%), Gaps = 10/175 (5%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TKRDAD ++Y++ + +ALHGDISQ RERTL GFR+G F +LVATDVA+RGLD+P
Sbjct: 319 TETKRDADRLAYAMAKNHKCEALHGDISQNVRERTLSGFREGHFNILVATDVAARGLDVP 378
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDLIIHY LP ETFVHRSGRTGRAGK+G A++++T R V +ERD G RF
Sbjct: 379 NVDLIIHYALPRCSETFVHRSGRTGRAGKKGTAILIYTQDDARQVKLIERDTGCRF---- 434
Query: 362 PPPMEDLPEL----PTRQVVSTLGRDRSN------QRGYRTGGDDWSSGGRRSGG 496
+LP++ + + + LGR RSN RGY +G +SG RS G
Sbjct: 435 ----SELPKIAVDGASLDMHNDLGRGRSNSSGGFGNRGYGSGQGSRNSGFGRSNG 485
[33][TOP]
>UniRef100_B6SV06 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SV06_MAIZE
Length = 613
Score = 165 bits (417), Expect = 3e-39
Identities = 92/199 (46%), Positives = 121/199 (60%), Gaps = 8/199 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKR+AD ++Y + S +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP
Sbjct: 346 TQTKREADRLAYVMGRSYQCQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 405
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL++HYE+P+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G RF +
Sbjct: 406 NVDLVVHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELP 465
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGG--------RRSGGDDWSSGG 517
P+ D + + + RS G R G +S G R GD GG
Sbjct: 466 KMPVSD----EAADMFNVMRDTRSRSVGSRRTGGPFSREGYGDFEDHRSRGFGDFDRFGG 521
Query: 518 RRPGGDDWSTEGRRSNGYS 574
G + G R +G S
Sbjct: 522 SSDRGGGFRDSGSRYHGGS 540
[34][TOP]
>UniRef100_B9GE86 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group
RepID=B9GE86_ORYSJ
Length = 676
Score = 162 bits (411), Expect = 1e-38
Identities = 96/204 (47%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD +SY++ S +ALHGDI+Q QRERTL GFR+G F +L+ATDVA+RGLDIP
Sbjct: 397 TQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIP 456
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM + Q R + +E DVG +F +
Sbjct: 457 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELP 516
Query: 362 PPPMEDLPELP-----------TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS 508
+E + R+ + GR S GG SG RSGG
Sbjct: 517 KINVEGSDLMSGGFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFGRSGGGFGR 576
Query: 509 SG----GRRPGGDDWSTEGRRSNG 568
SG GR GG + RS G
Sbjct: 577 SGGGGFGRSSGGGFGDSGFGRSGG 600
[35][TOP]
>UniRef100_A7PJZ6 Chromosome chr12 scaffold_18, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PJZ6_VITVI
Length = 341
Score = 162 bits (411), Expect = 1e-38
Identities = 77/116 (66%), Positives = 94/116 (81%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD ++Y++ + +ALHGDISQ QRERTL GFR G F VLVATDVA+RGLDIP
Sbjct: 218 TQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIP 277
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF 349
NVDLIIHYELP+ E FVHRSGRTGRAGK+G A++++ Q RTV +ERD+G +F
Sbjct: 278 NVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKF 333
[36][TOP]
>UniRef100_A2ZMM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2ZMM6_ORYSI
Length = 630
Score = 162 bits (411), Expect = 1e-38
Identities = 96/204 (47%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD +SY++ S +ALHGDI+Q QRERTL GFR+G F +L+ATDVA+RGLDIP
Sbjct: 349 TQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIP 408
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM + Q R + +E DVG +F +
Sbjct: 409 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELP 468
Query: 362 PPPMEDLPELP-----------TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS 508
+E + R+ + GR S GG SG RSGG
Sbjct: 469 KINVEGSDLMSGGFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFGRSGGGFGR 528
Query: 509 SG----GRRPGGDDWSTEGRRSNG 568
SG GR GG + RS G
Sbjct: 529 SGGGGFGRSSGGGFGDSGFGRSGG 552
[37][TOP]
>UniRef100_Q0ILZ4 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Oryza sativa Japonica
Group RepID=RH9_ORYSJ
Length = 628
Score = 162 bits (411), Expect = 1e-38
Identities = 96/204 (47%), Positives = 121/204 (59%), Gaps = 15/204 (7%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD +SY++ S +ALHGDI+Q QRERTL GFR+G F +L+ATDVA+RGLDIP
Sbjct: 349 TQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIP 408
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM + Q R + +E DVG +F +
Sbjct: 409 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELP 468
Query: 362 PPPMEDLPELP-----------TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS 508
+E + R+ + GR S GG SG RSGG
Sbjct: 469 KINVEGSDLMSGGFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFGRSGGGFGR 528
Query: 509 SG----GRRPGGDDWSTEGRRSNG 568
SG GR GG + RS G
Sbjct: 529 SGGGGFGRSSGGGFGDSGFGRSGG 552
[38][TOP]
>UniRef100_A9RFT8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9RFT8_PHYPA
Length = 638
Score = 162 bits (409), Expect = 2e-38
Identities = 78/139 (56%), Positives = 106/139 (76%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD+++ ++ + +A ALHGDISQ QRE+TL+ FR+G TVLVATDVA+RGLD+P
Sbjct: 280 TQTKRDADDVAMAMGNLVACGALHGDISQLQREKTLNAFREGNITVLVATDVAARGLDVP 339
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYE+P+ ETFVHR+GRTGRAGK G ++MFT Q RT+ ++E +V RF+ I
Sbjct: 340 NVDLVIHYEIPNDSETFVHRTGRTGRAGKTGTNILMFTNQQMRTMRTIESNVKCRFQMIG 399
Query: 362 PPPMEDLPELPTRQVVSTL 418
P ++D+ + QV L
Sbjct: 400 APHVKDVMQASFDQVRGAL 418
[39][TOP]
>UniRef100_Q0D8N0-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza
sativa Japonica Group RepID=Q0D8N0-2
Length = 585
Score = 159 bits (401), Expect = 2e-37
Identities = 92/194 (47%), Positives = 121/194 (62%), Gaps = 10/194 (5%)
Frame = +2
Query: 20 ADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNVDLII 199
AD ++Y++ S A +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIPNVDL+I
Sbjct: 324 ADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVI 383
Query: 200 HYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPPPMED 379
HYELP+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G +F + P +E
Sbjct: 384 HYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTEL--PKIEV 441
Query: 380 LPELPTRQVVSTLGRDRSNQRGY-RTGGDDWSSG-------GRRSGGDDWSSGGRRP--G 529
E + + + +RS G RTGG + G GR G D+ G P G
Sbjct: 442 ADE--ASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDGFGSSPNRG 499
Query: 530 GDDWSTEGRRSNGY 571
G R +G+
Sbjct: 500 GRSRDAGSRYGSGF 513
[40][TOP]
>UniRef100_A9T4H8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9T4H8_PHYPA
Length = 619
Score = 156 bits (395), Expect = 9e-37
Identities = 73/139 (52%), Positives = 103/139 (74%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDAD+++ ++ + ++ ALHGDISQ QRE+TL FR G+ VLVATDVA+RGLD+P
Sbjct: 258 TQTKRDADDVAMAMGNLVSCGALHGDISQVQREKTLSAFRDGKIAVLVATDVAARGLDVP 317
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NVDL+IHYE+P+ ETFVHR+GRTGRAG+ G ++MFT+ Q RT+ ++E +V +F+ +
Sbjct: 318 NVDLVIHYEIPNDSETFVHRTGRTGRAGRSGTNILMFTSQQVRTMRTIENNVKCKFQIVG 377
Query: 362 PPPMEDLPELPTRQVVSTL 418
P + D+ QV L
Sbjct: 378 LPHVRDVMRASFEQVKGAL 396
[41][TOP]
>UniRef100_C1E681 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas sp. RCC299
RepID=C1E681_9CHLO
Length = 790
Score = 151 bits (382), Expect = 3e-35
Identities = 72/122 (59%), Positives = 95/122 (77%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKR+ADE++ +L +A++ LHGDI+Q QRERTL FR GRF+VLVATDVA+RGLDI
Sbjct: 386 TQTKREADEVTAALGRRMATEVLHGDIAQAQRERTLKRFRDGRFSVLVATDVAARGLDIT 445
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+VDL++HYELP E+FVHR GRTGRA K+GAA+ M+T +K + S+ R+ G +F I
Sbjct: 446 DVDLVVHYELPHDTESFVHRCGRTGRANKKGAAIAMYTPREKSRIRSIVRETGVKFRVIN 505
Query: 362 PP 367
PP
Sbjct: 506 PP 507
[42][TOP]
>UniRef100_B4FZ88 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FZ88_MAIZE
Length = 255
Score = 150 bits (378), Expect = 9e-35
Identities = 85/183 (46%), Positives = 109/183 (59%), Gaps = 8/183 (4%)
Frame = +2
Query: 50 SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNVDLIIHYELPDGPET 229
S +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIPNVDL++HYE+P+ E
Sbjct: 4 SYQCQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVVHYEIPNTSEL 63
Query: 230 FVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPPPMEDLPELPTRQVV 409
FVHRSGRT RAGK+G+A++++T Q R V +E+D+G RF + P+ D +
Sbjct: 64 FVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELPKMPVSD----EAADMF 119
Query: 410 STLGRDRSNQRGYRTGGDDWSSGG--------RRSGGDDWSSGGRRPGGDDWSTEGRRSN 565
+ + RS G R G +S G R GD GG G + G R +
Sbjct: 120 NVMRDTRSRSVGSRRTGGPFSREGYGDFEDHRSRGFGDFERFGGSSDRGGGFRDSGSRYH 179
Query: 566 GYS 574
G S
Sbjct: 180 GGS 182
[43][TOP]
>UniRef100_B9S3L5 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9S3L5_RICCO
Length = 254
Score = 148 bits (373), Expect = 3e-34
Identities = 88/165 (53%), Positives = 105/165 (63%), Gaps = 8/165 (4%)
Frame = +2
Query: 62 KALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNVDLIIHYELPDGPETFVHR 241
+ALHGDISQ QRERTL GFR G F +LVATDVA+RGLD+PNVDL+IHY LP+ ETFVHR
Sbjct: 8 EALHGDISQSQRERTLSGFRSGSFNILVATDVAARGLDVPNVDLVIHYALPNCSETFVHR 67
Query: 242 SGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPPPMEDLPELPTRQVVSTLG 421
SGRTGRAGK+G A++++T Q R V ER++G RF ELP R V G
Sbjct: 68 SGRTGRAGKKGTAILVYTPDQTRQVKIYEREIGCRF-----------TELP-RITVEGGG 115
Query: 422 RDRSNQ-RGYRTGGDD----WSSGGRRSGGDDWSS---GGRRPGG 532
D + G R GG +G R+GG D+ S GG R GG
Sbjct: 116 MDMIDMGNGGRFGGSRDRRFGDTGFGRAGGGDYGSGRFGGNRSGG 160
[44][TOP]
>UniRef100_Q72GF3 Heat resistant RNA dependent ATPase n=1 Tax=Thermus thermophilus
HB27 RepID=Q72GF3_THET2
Length = 517
Score = 143 bits (360), Expect = 1e-32
Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK + +EI+ L ++ALHGD+SQ +RER L FRQG VLVATDVA+RGLDI
Sbjct: 252 TRTKAETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDI 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL++HY LPD E + HRSGRTGRAG+ G V+++ ++R V +LER VG RF+ +
Sbjct: 312 PQVDLVVHYRLPDRAEAYQHRSGRTGRAGRGGRVVLLYGPRERRDVEALERAVGRRFKRV 371
Query: 359 RPPPMEDLPELPTRQVVSTLGR 424
PP E++ E R +++ L R
Sbjct: 372 NPPTPEEVLEAKWRHLLARLAR 393
[45][TOP]
>UniRef100_Q5SM34 ATP-dependent RNA helicase n=2 Tax=Thermus thermophilus
RepID=Q5SM34_THET8
Length = 517
Score = 143 bits (360), Expect = 1e-32
Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK + +EI+ L ++ALHGD+SQ +RER L FRQG VLVATDVA+RGLDI
Sbjct: 252 TRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDI 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL++HY LPD E + HRSGRTGRAG+ G V+++ ++R V +LER VG RF+ +
Sbjct: 312 PQVDLVVHYRLPDRAEAYQHRSGRTGRAGRGGRVVLLYGPRERRDVEALERAVGRRFKRV 371
Query: 359 RPPPMEDLPELPTRQVVSTLGR 424
PP E++ E R +++ L R
Sbjct: 372 NPPTPEEVLEAKWRHLLARLAR 393
[46][TOP]
>UniRef100_B7A6V9 DEAD/DEAH box helicase domain protein n=1 Tax=Thermus aquaticus
Y51MC23 RepID=B7A6V9_THEAQ
Length = 513
Score = 142 bits (357), Expect = 2e-32
Identities = 69/142 (48%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T+TK + +E++ L A++A+HGD+SQ RER + FR+G VLVATDVA+RGLDI
Sbjct: 244 TKTKAETEEVATGLLRLGHAARAIHGDLSQADRERVMRAFREGEVRVLVATDVAARGLDI 303
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL++HY LPD PET+ HRSGRTGRAG+ G V+++ +KR + LER VG F+ +
Sbjct: 304 PEVDLVVHYRLPDKPETYQHRSGRTGRAGRGGEVVILYGPREKRELAELERAVGRPFKRV 363
Query: 359 RPPPMEDLPELPTRQVVSTLGR 424
PP E++ E + +++ L R
Sbjct: 364 NPPTPEEVLEAKWQHLLARLAR 385
[47][TOP]
>UniRef100_UPI0000164CF2 RNA helicase n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164CF2
Length = 560
Score = 140 bits (353), Expect = 7e-32
Identities = 72/124 (58%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTKR+ADE++ L + S+ALHGD++Q QRER L FR GR VLVATDVA+RGLDI
Sbjct: 128 TRTKREADELANELIHRGLESEALHGDLAQTQRERALGAFRSGRVGVLVATDVAARGLDI 187
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL++ Y LP PE++VHRSGRTGRAG+ G A++M+ + R V+ LER G RF+
Sbjct: 188 PEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIIMYGDRENREVMGLERITGVRFK-E 246
Query: 359 RPPP 370
RP P
Sbjct: 247 RPLP 250
[48][TOP]
>UniRef100_Q019E9 ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q019E9_OSTTA
Length = 683
Score = 139 bits (351), Expect = 1e-31
Identities = 67/122 (54%), Positives = 91/122 (74%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKR ADE++ +L ++ + LHGDI+Q QRERTL FR RFTVL+ATDVA+RGLDI
Sbjct: 280 TQTKRAADELTAALGKRVSCEVLHGDIAQAQRERTLQRFRDNRFTVLIATDVAARGLDIS 339
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+VDL+IHYELP+ E+FVHR GRTGRAG++GAA+ M+T + + ++++ G F I
Sbjct: 340 DVDLVIHYELPNDVESFVHRCGRTGRAGQQGAAIAMYTDRESYMIRRIQKETGCDFRAID 399
Query: 362 PP 367
P
Sbjct: 400 IP 401
[49][TOP]
>UniRef100_C1CWT4 Putative DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Deinococcus
deserti VCD115 RepID=C1CWT4_DEIDV
Length = 602
Score = 139 bits (350), Expect = 2e-31
Identities = 72/127 (56%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTKR+ADE++ L + ++ALHGD++Q QRER L FR GR VLVATDVA+RGLDI
Sbjct: 247 TRTKREADELANELIHRGLEAEALHGDLAQSQRERALGAFRSGRVGVLVATDVAARGLDI 306
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF-EF 355
P VDL++ Y LP PE++VHRSGRTGRAG+ G A++M+ + R V+ LER G RF E
Sbjct: 307 PEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIIMYGDRENREVMGLERITGVRFIER 366
Query: 356 IRPPPME 376
P P E
Sbjct: 367 PLPTPKE 373
[50][TOP]
>UniRef100_C1MMH8 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MMH8_9CHLO
Length = 803
Score = 139 bits (350), Expect = 2e-31
Identities = 67/122 (54%), Positives = 91/122 (74%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKR+ADE++ +L +A++ LHGDI+Q QRERTL FR RF+VLVATDVA+RGLDI
Sbjct: 395 TQTKREADEVTAALGRRMATEVLHGDIAQAQRERTLKRFRDNRFSVLVATDVAARGLDIT 454
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+VDL++H+ELP+ E+FVHR GRTGRA K G A+ MFT + + ++ R+ G F+ I
Sbjct: 455 DVDLVVHFELPNDTESFVHRCGRTGRANKRGTAIAMFTPRENYRLRTIVRETGVTFKSIN 514
Query: 362 PP 367
P
Sbjct: 515 AP 516
[51][TOP]
>UniRef100_A4RXF6 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RXF6_OSTLU
Length = 346
Score = 137 bits (346), Expect = 4e-31
Identities = 68/122 (55%), Positives = 90/122 (73%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKR ADE++ +L +AS+ LHGDI+Q QRERTL FR RF+VL+ATDVA+RGLDI
Sbjct: 216 TQTKRAADELTAALGRRVASEVLHGDIAQAQRERTLQRFRDNRFSVLIATDVAARGLDIS 275
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+VDL+IHYELP+ E+FVHR GRTGRAG+ GAA+ M T + + ++++ G F I
Sbjct: 276 DVDLVIHYELPNDVESFVHRCGRTGRAGQLGAAIAMHTDRESYMIRRIKKETGCEFRTIG 335
Query: 362 PP 367
P
Sbjct: 336 IP 337
[52][TOP]
>UniRef100_Q1J0S9 DEAD/DEAH box helicase-like protein n=1 Tax=Deinococcus
geothermalis DSM 11300 RepID=Q1J0S9_DEIGD
Length = 591
Score = 135 bits (340), Expect = 2e-30
Identities = 71/124 (57%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTKR+ADE++ L I S+ALHGD++Q QRER L FR GR VLVATDVA+RGLDI
Sbjct: 252 TRTKREADELANELIHRGIESEALHGDLAQSQRERALGAFRSGRVGVLVATDVAARGLDI 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL++ Y LP PE++VHRSGRTGRAG+ G A+VM+ + R + +LE G +F+
Sbjct: 312 PEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIVMYGDRENRELRNLEYRTGVQFK-E 370
Query: 359 RPPP 370
RP P
Sbjct: 371 RPLP 374
[53][TOP]
>UniRef100_B7G0R3 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7G0R3_PHATR
Length = 822
Score = 135 bits (340), Expect = 2e-30
Identities = 67/128 (52%), Positives = 93/128 (72%), Gaps = 3/128 (2%)
Frame = +2
Query: 2 TRTKRDADE-ISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKR+ADE +S + S+ ++ALHGD+ Q QR+ TL FR G F VLVATDVA+RG+DI
Sbjct: 442 TETKREADELVSGGVFKSLTAQALHGDVGQKQRDSTLAAFRSGAFNVLVATDVAARGIDI 501
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEF- 355
+VDL+I ++ P +T+VHRSGRTGRAGK+G +V++F Q R ++ +ERD+G F+F
Sbjct: 502 QDVDLVIQFDPPRDVDTYVHRSGRTGRAGKKGVSVLLFNQRQSRDIVRIERDLGHGFKFD 561
Query: 356 -IRPPPME 376
+ PP E
Sbjct: 562 LVGPPSAE 569
[54][TOP]
>UniRef100_C1XW74 ATP-dependent RNA helicase DbpA n=1 Tax=Meiothermus silvanus DSM
9946 RepID=C1XW74_9DEIN
Length = 538
Score = 132 bits (333), Expect = 1e-29
Identities = 65/148 (43%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK + DE++ L + I + +HGD+SQ +RER L FR+G TVLVATDVA+RGLDI
Sbjct: 254 TRTKAEVDELATGLQARGIGAAPIHGDMSQRERERVLGRFREGTDTVLVATDVAARGLDI 313
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL++H+ LP+ E + HRSGRTGRAG+ G ++ + ++R + +LE V RF+ +
Sbjct: 314 PEVDLVVHFRLPEKAEPYQHRSGRTGRAGRSGRVILFYGPRERRELENLEYAVKRRFKRV 373
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQR 442
PP E++ E +++++ L + ++R
Sbjct: 374 NPPTPEEVQEAKWQRLLARLAKQPPHER 401
[55][TOP]
>UniRef100_A8JGT1 RNA helicase n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGT1_CHLRE
Length = 737
Score = 130 bits (327), Expect = 7e-29
Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T +K++A E+S L S+ ++ALHGD++Q RE+TLDGFR+GRF +L+ATDVA+RGLD+
Sbjct: 367 TDSKKEAAELSVVLGDSLGAQALHGDLAQSMREQTLDGFRKGRFAILIATDVAARGLDVT 426
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
++L++ + P ET++HRSGRTGRAG G V + T + V +E+ G +FE I
Sbjct: 427 GIELVLMVDPPADWETYIHRSGRTGRAGSSGVCVTLVTKKMEYMVPIIEKRAGMKFERIG 486
Query: 362 PPPMEDLPELPTRQVVSTLGR-DRSNQRGYRTGGDDWSSGGRRSGGD 499
P D+ + + +S LG D + +R + + S G D
Sbjct: 487 APQPADMARIAAERTLSLLGEVDPAVVGHFREAAERYLSESAADGRD 533
[56][TOP]
>UniRef100_B8BZG6 RNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BZG6_THAPS
Length = 466
Score = 129 bits (324), Expect = 2e-28
Identities = 64/128 (50%), Positives = 93/128 (72%), Gaps = 3/128 (2%)
Frame = +2
Query: 2 TRTKRDADE-ISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK++ADE +S S+ +++++A+HGDI Q QR+ TL FR G F VLVATDVA+RG+DI
Sbjct: 257 TETKKEADELVSGSVFKTLSAQAIHGDIGQKQRDATLAAFRAGAFNVLVATDVAARGIDI 316
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS--RFE 352
+VDL+I +E P +T+VHRSGRTGRAG G +V++F +Q R ++ +E+ +G +FE
Sbjct: 317 KDVDLVIQFEPPRDVDTYVHRSGRTGRAGASGISVLLFQQNQARDIVRIEKSLGHGFKFE 376
Query: 353 FIRPPPME 376
+ PP E
Sbjct: 377 LLGPPSTE 384
[57][TOP]
>UniRef100_C1XGK2 ATP-dependent RNA helicase DbpA n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XGK2_MEIRU
Length = 556
Score = 129 bits (323), Expect = 2e-28
Identities = 61/128 (47%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKA-LHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK + ++++ L S S A +HGD+ Q RER ++ FR G +VLVATDVA+RGLDI
Sbjct: 245 TSTKAECNDLALGLESRAHSAAPIHGDMGQIDRERVMERFRSGAVSVLVATDVAARGLDI 304
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL++HY LPD E+++HRSGRTGRAG+ G V+++ +KR + +LER++ F+ +
Sbjct: 305 PEVDLVVHYRLPDQNESYLHRSGRTGRAGRSGKVVILYGPREKRELETLERELKRNFKRV 364
Query: 359 RPPPMEDL 382
PP E++
Sbjct: 365 NPPTPEEV 372
[58][TOP]
>UniRef100_A8J6S5 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J6S5_CHLRE
Length = 384
Score = 127 bits (320), Expect = 5e-28
Identities = 60/103 (58%), Positives = 77/103 (74%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK ADE++ ++ ALHGDISQ QRE+ L FR+G++ LVATDVA+RGLDIPNV
Sbjct: 282 TKAKADEVNLAVNEFAPCDALHGDISQAQREKALSLFREGKYAALVATDVAARGLDIPNV 341
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTV 316
DL++HY++P E F+HRSGRTGRAGK G AVV+FT + R +
Sbjct: 342 DLVVHYDVPQDNEAFLHRSGRTGRAGKTGTAVVLFTDRESRAL 384
[59][TOP]
>UniRef100_UPI00019267D4 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Hydra magnipapillata RepID=UPI00019267D4
Length = 685
Score = 127 bits (318), Expect = 8e-28
Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIA-SKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK++A+E+S + SSI S+ LHGDISQ QRE TL GFR G+F L+ATDVA+RGLDI
Sbjct: 313 TTTKQEANELS--VESSIPDSQVLHGDISQSQREITLQGFRNGKFNCLIATDVAARGLDI 370
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VDL+I E P+ + ++HR+GRTGRAG+ G VV + Q+ + ++E+ G FE I
Sbjct: 371 PEVDLVIQTEPPNDIDFYIHRAGRTGRAGRSGVCVVFYKPGQESEIAAVEKRTGVTFEKI 430
Query: 359 RPPPMEDL 382
PP E++
Sbjct: 431 TPPNPEEI 438
[60][TOP]
>UniRef100_C6XMJ7 DEAD/DEAH box helicase domain protein n=1 Tax=Hirschia baltica ATCC
49814 RepID=C6XMJ7_HIRBI
Length = 769
Score = 127 bits (318), Expect = 8e-28
Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 14/204 (6%)
Frame = +2
Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD++ S + + I A+HG+ SQ QRER L+ FR G VLVATD+A+RG+D+
Sbjct: 252 TRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDSKVLVATDIAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P V + +YE+P+ PE +VHR GRT RAG+EG A+ + +K+ ++ ++R + +
Sbjct: 312 PGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKYLLDIQRQIRMKI--- 368
Query: 359 RPPPMEDLPE----------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRS--GGDD 502
P+ DLPE V+ R R + G R GG D GGR GG D
Sbjct: 369 ---PIVDLPEGFIDQAEEITANATPVIEERPRGRGGRDGAR-GGRDGGRGGRDGGRGGRD 424
Query: 503 WSSGGRRPG-GDDWSTEGRRSNGY 571
GGR G G GR GY
Sbjct: 425 GGRGGRDGGRGRSEGRGGRDGGGY 448
[61][TOP]
>UniRef100_A9SDC8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SDC8_PHYPA
Length = 689
Score = 126 bits (316), Expect = 1e-27
Identities = 68/127 (53%), Positives = 86/127 (67%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK DA E++ +L S A +ALHGDI Q QRE TL GFR G+F+VLVATDVA+RGLDI
Sbjct: 369 TETKNDASELAGALKSGTA-RALHGDIPQNQREVTLQGFRTGKFSVLVATDVAARGLDIN 427
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V L+I E P ET++HRSGRTGRAG G +V+ F ++ V +ER G +FE I
Sbjct: 428 DVQLVIQCEPPRDAETYIHRSGRTGRAGNTGVSVLFFDRKKEYMVPQIERKAGFKFERIA 487
Query: 362 PPPMEDL 382
P D+
Sbjct: 488 APQPLDI 494
[62][TOP]
>UniRef100_C4ZIT1 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T
RepID=C4ZIT1_THASP
Length = 441
Score = 124 bits (312), Expect = 4e-27
Identities = 80/197 (40%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKR ADE+S +L I++ ALHGD+ Q QR RTLD RQGR VLVATDVA+RG+D+
Sbjct: 252 TATKRSADELSLALQEKGISAAALHGDMHQTQRNRTLDRLRQGRIGVLVATDVAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +I+++ P E +VHR GRTGRAG++G A+ + + + ++ER G R
Sbjct: 312 AGISHVINFDPPRQAEDYVHRIGRTGRAGRDGIAITLSGPRETGLIRAIERFTGDRLAVH 371
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGR--RSGGDDWSSGG----- 517
P ME P P G G R G SG R GGD SGG
Sbjct: 372 TIPGMEPSPRKPA-------GPRPGGNSGRRFGSGAKPSGSSYGRPGGDARRSGGGFSRD 424
Query: 518 RRPGGDDWSTEGRRSNG 568
P + S + RRS G
Sbjct: 425 GHPSRSERSHDDRRSRG 441
[63][TOP]
>UniRef100_UPI00019267D5 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Hydra magnipapillata RepID=UPI00019267D5
Length = 635
Score = 123 bits (308), Expect = 1e-26
Identities = 61/149 (40%), Positives = 91/149 (61%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK++A+E++ + ++ S+ LHGDI Q QRE TL FR G+F L+ATDVA+RGLDIP
Sbjct: 308 TSTKQEANELALNSVINMDSQVLHGDIQQKQRELTLQSFRNGKFNCLIATDVAARGLDIP 367
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL+I E P ++++HR+GRTGRAG++G ++ + Q+ V ++E G F I
Sbjct: 368 EVDLVIQTEPPKDVDSYIHRAGRTGRAGRKGVCIIFYKPGQEYGVAAVEHKAGISFTRIG 427
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGY 448
P +DL V +L + + Y
Sbjct: 428 APQQKDLIAASAEDAVRSLDEVKEDVISY 456
[64][TOP]
>UniRef100_A3WD13 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1
RepID=A3WD13_9SPHN
Length = 484
Score = 122 bits (307), Expect = 1e-26
Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L+ + I + A+HG+ SQ QR+R LD FR+G+ +LVATDVA+RG+DI
Sbjct: 257 TRTKHGADRVVKKLSRAGIPANAIHGNKSQPQRQRALDEFRRGKTMILVATDVAARGIDI 316
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P V +++YELP+ PE +VHR GRT RAGK+G A+ ++ + + + G+ + +
Sbjct: 317 PGVSHVLNYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAYLKDIRKTTGAELDRL 376
Query: 359 RPP-----------PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDW 505
P P + P TR + + + GD SS ++ GG
Sbjct: 377 NLPENFRAVVEGVGPTKPAPRGATRVSAKKIKPKPAGASAGKPAGDG-SSKPKKPGGKHP 435
Query: 506 SSGGR---RPGGDDWSTEGRRSNG 568
S GR RPGG + + RRS G
Sbjct: 436 SRKGRPSGRPGGGNPNGNSRRSGG 459
[65][TOP]
>UniRef100_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula
baltica RepID=Q7UJ92_RHOBA
Length = 485
Score = 121 bits (304), Expect = 3e-26
Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 5/182 (2%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD ++ L + + + A+HG+ +Q R RTL+ F+ VLVATDVA+RG+DI
Sbjct: 263 TRTKHGADAVARRLVKAGVKAAAIHGNKTQANRVRTLNKFKNDELDVLVATDVAARGIDI 322
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +I+Y+ P+ PE +VHR GRTGRAG+EG V+ + + I++ER++ +
Sbjct: 323 DGIQTVINYDTPNTPEAYVHRIGRTGRAGREGETVMFCGGHETKFFIAIEREIK-----L 377
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQR-GYRTGGDDWSSGGRR---SGGDDWSSGGRRP 526
+ P LP R + D+++ R G R+GG S GGR SG + GG +P
Sbjct: 378 QIPVATGLPGCQPRPLQDPESGDKASSRSGGRSGGGGQSGGGRSRSGSGAQGGTGGGSKP 437
Query: 527 GG 532
GG
Sbjct: 438 GG 439
[66][TOP]
>UniRef100_A9S0Z8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9S0Z8_PHYPA
Length = 657
Score = 121 bits (304), Expect = 3e-26
Identities = 65/127 (51%), Positives = 84/127 (66%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK DA E++ L S A +ALHGDI Q QRE TL GFR +F+VLVATDVA+RGLDI
Sbjct: 340 TETKNDASELAGVLKSGTA-RALHGDIPQNQREVTLQGFRTSKFSVLVATDVAARGLDIN 398
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V L+I E P ET++HRSGRTGRAG G +V+ + ++ + +ER G +FE I
Sbjct: 399 DVQLVIQCEPPRDAETYIHRSGRTGRAGNTGISVLFYDRKKEYMIPQIERKAGFKFERIA 458
Query: 362 PPPMEDL 382
P D+
Sbjct: 459 APQPADI 465
[67][TOP]
>UniRef100_UPI0000E48294 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a
n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48294
Length = 657
Score = 121 bits (303), Expect = 4e-26
Identities = 60/138 (43%), Positives = 86/138 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TKRDA+E++ S ++ +HGDI Q QRE TL GFR+G+F LV TDVA+RGLDIP V
Sbjct: 362 TKRDANELAMSSDVKQETQVMHGDIPQTQREVTLKGFREGKFQCLVTTDVAARGLDIPEV 421
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P ++++HRSGRTGRAG+ G V + ++R + +E G +F+ + P
Sbjct: 422 DLVIQCNPPRDVDSYIHRSGRTGRAGRNGVCVCFYKRQEERDLQKVEYKAGIKFKRVSAP 481
Query: 368 PMEDLPELPTRQVVSTLG 421
D+ + + V LG
Sbjct: 482 QPSDIIKSSVKDVTDLLG 499
[68][TOP]
>UniRef100_B8DTG1 Possible ATP-dependent RNA helicase n=4 Tax=Bifidobacterium
animalis subsp. lactis RepID=B8DTG1_BIFA0
Length = 658
Score = 120 bits (301), Expect = 7e-26
Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 17/203 (8%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK A +++++LT S I + LHG++SQ+QR+R L F G+ VLVATDVA+RG+D+
Sbjct: 299 TRTKFQAKKLAHTLTQSGIPAAELHGNLSQHQRDRNLQVFESGQVNVLVATDVAARGIDV 358
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
NV L++ E P+ P++F HRSGRT RAG+ G V + T QKR + L ++V I
Sbjct: 359 SNVGLVVQVEPPEDPKSFTHRSGRTARAGQSGDVVTLMTPDQKRKIRHLFKEVD-----I 413
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYR-----------TGGDDWSSGGR----RSG 493
+ P+E PE P QV +G+ G+ GG GR
Sbjct: 414 KLKPVEVTPESP--QVQELVGQKADPVHGWELPELERRPRKGNGGKSRRDRGRTNRDEER 471
Query: 494 GDDWSSGGRRPG-GDDWSTEGRR 559
G+ + GGRR G G+ TE R
Sbjct: 472 GNRSARGGRRTGKGEHRPTERER 494
[69][TOP]
>UniRef100_A7HW11 DEAD/DEAH box helicase domain protein n=1 Tax=Parvibaculum
lavamentivorans DS-1 RepID=A7HW11_PARL1
Length = 448
Score = 120 bits (301), Expect = 7e-26
Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK A+ +S L S + S+A+HG+ SQ R+R LD FR G+ VLVATD+A+RG+D+
Sbjct: 254 TRTKHCANRVSEQLDKSGVLSEAIHGNKSQGARQRALDMFRNGKARVLVATDIAARGIDV 313
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
++ +I+YELP+ PE++VHR GRT RAGK G A+ AS++ + S+E+
Sbjct: 314 SDITHVINYELPNEPESYVHRIGRTARAGKSGIALSFCDASERSHLRSIEKLTK------ 367
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
RP + D E QV G + + G R GG + R G GG+ GG
Sbjct: 368 RPLTVMDTTEWLGEQVAVPAGEPMAKRAGNRNGGGPRNGNSNRQPGKPRRFGGKPGGG 425
[70][TOP]
>UniRef100_UPI0001555D90 PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0001555D90
Length = 757
Score = 119 bits (299), Expect = 1e-25
Identities = 61/138 (44%), Positives = 90/138 (65%)
Frame = +2
Query: 5 RTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
RTK++A E+S S +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP
Sbjct: 432 RTKKEATELSLSPAIKQDAQSLHGDIPQKQREITLKGFRSGAFGVLVATNVAARGLDIPE 491
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
VDL++ P+ E+++HRSGRTGRAG+ G V + A ++ + +E+ G F+ I
Sbjct: 492 VDLVVQSSPPEDVESYIHRSGRTGRAGRTGICVCFYQAKEEYQLSQVEQKAGITFKRIGV 551
Query: 365 PPMEDLPELPTRQVVSTL 418
P ++ + ++ V+ +L
Sbjct: 552 PTTSEVVKASSKDVLRSL 569
[71][TOP]
>UniRef100_A9D237 DEAD/DEAH box helicase-like protein n=1 Tax=Hoeflea phototrophica
DFL-43 RepID=A9D237_9RHIZ
Length = 508
Score = 119 bits (299), Expect = 1e-25
Identities = 79/192 (41%), Positives = 107/192 (55%), Gaps = 14/192 (7%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTKR AD+ + L I + A+HG+ SQ QRER L GFR G VL+ATD+A+RG+D+
Sbjct: 259 TRTKRGADKAAKRLEGDGINAAAIHGNKSQGQRERALAGFRAGTVPVLIATDIAARGIDV 318
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P V L+++YELP+ PE +VHR GRT RAG EG AV F A +R SL RD+ +
Sbjct: 319 PGVSLVVNYELPNVPEVYVHRIGRTARAGAEGTAVT-FCAPDER---SLLRDIEKMLKV- 373
Query: 359 RPPPMEDLPELPTRQVV-------STLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG- 514
P+E+ PE + + L R + ++G R G GR G+ G
Sbjct: 374 -AIPVENAPEGTYVDALADPDGDFAPLNRTQRPRQGARPQGAKPQGQGRNRSGNGQGRGK 432
Query: 515 -----GRRPGGD 535
GR+PGG+
Sbjct: 433 PGGGQGRKPGGN 444
[72][TOP]
>UniRef100_A3ZXX1 ATP-dependent RNA helicase n=1 Tax=Blastopirellula marina DSM 3645
RepID=A3ZXX1_9PLAN
Length = 447
Score = 119 bits (299), Expect = 1e-25
Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 19/196 (9%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T+TK AD ++ L +S I + A+HG+ +Q +R R L+ FR GR VLVATDVA+RG+D+
Sbjct: 246 TKTKHGADRLAKELNASGIRTDAIHGNKTQNKRNRALESFRSGRLQVLVATDVAARGIDV 305
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
V +++++LP PE++VHR GRTGRAGKEG A+ S+ T+ ++ER + +
Sbjct: 306 DGVTHVVNFDLPIDPESYVHRIGRTGRAGKEGIALSFCDFSEHGTLRAIERLIRTTITVD 365
Query: 359 RPPPMEDLPEL---------PTRQVVSTLGRDRSN----QRGYRTGGDDWSS-----GGR 484
P P P R + GR N GY GG D S GG
Sbjct: 366 ADHPFHVEPRSRGPRSGGGGPRRSYGKSSGRPAGNGGGRSGGYSQGGGDSSERPKTYGGG 425
Query: 485 RSGGDDWSSGGRRPGG 532
RSGG +GG+RP G
Sbjct: 426 RSGGAK-RTGGKRPFG 440
[73][TOP]
>UniRef100_B6AXU7 ATP-dependent RNA helicase DeaD n=1 Tax=Rhodobacterales bacterium
HTCC2083 RepID=B6AXU7_9RHOB
Length = 450
Score = 119 bits (298), Expect = 2e-25
Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +++ L + A+ ++HG+ SQ QRER L F+ G VLVATDVA+RGLDIP
Sbjct: 256 RTKHGCEKLMKQLVARGFAATSIHGNKSQGQRERALAAFKAGEMKVLVATDVAARGLDIP 315
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAGK+GAA+ + + +E+ +
Sbjct: 316 DVRHVYNYELPNVPDAYVHRIGRTARAGKDGAAIAFCAPDEMDLLKDIEKTMKISIPVAS 375
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
P D + + GR + G R GG GGR GG GG+ GG
Sbjct: 376 GTPWVDFDGVSAKSRSGMGGRGKGGGGGRRGGG----GGGRPGGGGRPGGGGKPGGGSGK 431
Query: 542 STEGRRSNGYS 574
GRR G S
Sbjct: 432 PGGGRRRRGGS 442
[74][TOP]
>UniRef100_B3RVR9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RVR9_TRIAD
Length = 633
Score = 119 bits (298), Expect = 2e-25
Identities = 60/137 (43%), Positives = 85/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A+E++ S + LHGDI Q QRE TL GFR+G F LVATDVA+RGLDIP V
Sbjct: 311 TKKEANELALSSVLKQEVQVLHGDIQQAQREVTLKGFREGNFPCLVATDVAARGLDIPEV 370
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I E P +T++HRSGRTGRA + G + + + + + S+E + G F I P
Sbjct: 371 DLVIQCEPPKDADTYIHRSGRTGRANRTGICITFYKPTHQDRIKSIESEAGINFCRIGAP 430
Query: 368 PMEDLPELPTRQVVSTL 418
+ D+ + +R +L
Sbjct: 431 QLGDIIQATSRDAAKSL 447
[75][TOP]
>UniRef100_UPI0001555D8F PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1
Tax=Ornithorhynchus anatinus RepID=UPI0001555D8F
Length = 790
Score = 119 bits (297), Expect = 2e-25
Identities = 60/137 (43%), Positives = 89/137 (64%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA E++ + ++ALHGDI+Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 443 TKKDATEMALNSNIKQEAQALHGDIAQSQREITLKGFRNGVFKVLVATNVAARGLDIPEV 502
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + F ++ + +E+ G F+ + P
Sbjct: 503 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFFQPRERCQLRYVEQKSGITFKHVNIP 562
Query: 368 PMEDLPELPTRQVVSTL 418
+ D+ + ++ +S+L
Sbjct: 563 SLVDIIQASSKDAISSL 579
[76][TOP]
>UniRef100_A1K278 Putative ATP-dependent RNA helicase n=1 Tax=Azoarcus sp. BH72
RepID=A1K278_AZOSB
Length = 447
Score = 119 bits (297), Expect = 2e-25
Identities = 78/196 (39%), Positives = 104/196 (53%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK+ ADE+S SL ++ ALHGD+ Q R RTL RQGR VLVATDVA+RG+D+
Sbjct: 252 TATKKSADELSLSLQEKGFSAAALHGDMHQTVRNRTLQRLRQGRIGVLVATDVAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +I+++ P E +VHR GRTGRAG++G A+ + + + ++ER G R
Sbjct: 312 AGISHVINFDPPRQVEDYVHRIGRTGRAGRDGIAITLSGPRETGLIRAIERFTGDRLAVH 371
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG-- 532
P +E P P+ GR R G GG GGR GG GGR GG
Sbjct: 372 TIPGLEPAPRRPSAPRPGGPGR-RFGSGGKPGGG----FGGRSEGG----YGGRGEGGRG 422
Query: 533 ----DDWSTEGRRSNG 568
D +T RS+G
Sbjct: 423 AYGRDGHATRNERSHG 438
[77][TOP]
>UniRef100_A6MCY9 DEAD/DEAH box helicase family protein n=1 Tax=Oryza brachyantha
RepID=A6MCY9_9ORYZ
Length = 688
Score = 119 bits (297), Expect = 2e-25
Identities = 65/129 (50%), Positives = 83/129 (64%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK A E+S + S +ALHGD++Q QRE L GFR G+F VLVAT+VA+RGLDI
Sbjct: 366 TETKESASELSGLIAGS---RALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDIN 422
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V LII E P E ++HRSGRTGRAG G AV++F K V +ER+ G +FE I
Sbjct: 423 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFDPRHKFNVNRIERESGVKFEHIS 482
Query: 362 PPPMEDLPE 388
P D+ +
Sbjct: 483 APQPTDVAQ 491
[78][TOP]
>UniRef100_UPI000179595A PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1
Tax=Equus caballus RepID=UPI000179595A
Length = 785
Score = 118 bits (296), Expect = 3e-25
Identities = 58/137 (42%), Positives = 89/137 (64%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S S++ + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 449 TKKEAQELSQSVSIKLDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 508
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 509 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEHQLAQVEQKAGIKFKRIGVP 568
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 569 SATEIIKASSKDAIRLL 585
[79][TOP]
>UniRef100_UPI00016A33B9 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia
oklahomensis EO147 RepID=UPI00016A33B9
Length = 509
Score = 118 bits (296), Expect = 3e-25
Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 3/193 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 310 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 369
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 370 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 422
Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS-SGGRRPGG 532
R P P+ + R+ DR N RG R GG+ +GGRR GG S +GG R GG
Sbjct: 423 RAPLPVNVIEGFEPRKAPPR--NDRGNGRG-RPGGN--GNGGRRFGGKPGSGNGGGRSGG 477
Query: 533 DDWSTEGRRSNGY 571
G GY
Sbjct: 478 WSGKPSGGSREGY 490
[80][TOP]
>UniRef100_A4CNG8 ATP-dependent RNA helicase n=1 Tax=Robiginitalea biformata HTCC2501
RepID=A4CNG8_9FLAO
Length = 579
Score = 118 bits (296), Expect = 3e-25
Identities = 58/130 (44%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD +++ L + ALHGD+SQ QR+ ++ FR+ + +LVATDVA+RG+D+
Sbjct: 237 RTKRDTQKVAEKLIEDGYNAGALHGDLSQQQRDLVMNAFRKRQLQLLVATDVAARGIDVD 296
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V +IHY+LPD ET+ HRSGRTGRAGK G ++V+ T S++R + ++E+ +G FE +
Sbjct: 297 DVTHVIHYQLPDETETYTHRSGRTGRAGKSGVSMVILTRSEQRRIRAIEKIIGRPFEQKK 356
Query: 362 PPPMEDLPEL 391
P ++ E+
Sbjct: 357 LPDGMEICEI 366
[81][TOP]
>UniRef100_A6E415 DEAD/DEAH box helicase-like protein n=1 Tax=Roseovarius sp. TM1035
RepID=A6E415_9RHOB
Length = 429
Score = 118 bits (295), Expect = 4e-25
Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 RTKRDADEISYSLTSSIAS-KALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +D+++ L + S A+HG+ SQ QRER L FR G +LVATDVA+RGLDIP
Sbjct: 247 RTKHGSDKLAKRLEQAGYSVAAIHGNKSQGQRERALKSFRDGHVKILVATDVAARGLDIP 306
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAG++GAA+ + + +++ +G+
Sbjct: 307 DVKHVYNYELPNVPDNYVHRIGRTARAGRDGAAIAFCAPDEMGELKDIQKVLGTTIPVAS 366
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRR-PGGDD 538
P E LP+ + + + G R RTGG SGG + G G RR PGG
Sbjct: 367 GRPWEVLPDPKSPKPATGRGGPRR-----RTGGGGGFSGGGQQGKPGAGGGRRRKPGG-- 419
Query: 539 WSTEGRRSN 565
G RSN
Sbjct: 420 -GGGGARSN 427
[82][TOP]
>UniRef100_B4F9Y2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4F9Y2_MAIZE
Length = 614
Score = 118 bits (295), Expect = 4e-25
Identities = 80/215 (37%), Positives = 105/215 (48%), Gaps = 26/215 (12%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR+AD + Y L S+ ++ ++HGD +Q +RER L F+ G +LVATDVASRGLD+PN
Sbjct: 356 TKREADSLQYCLQSNGFSATSIHGDRTQQERERALKSFKSGATPILVATDVASRGLDVPN 415
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVIS-LERDVGSRFEFIR 361
V +I+Y+LP + +VHR GRTGRAGK G A +FT S LE G++ +
Sbjct: 416 VAHVINYDLPKSIDDYVHRIGRTGRAGKAGKATALFTESNHHLAKDLLELMTGAKQDV-- 473
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRG--------------------YRTGGDDWSSGG 481
P + D P S GR R G Y + G +S GG
Sbjct: 474 PEWLGDYASRPCSGGSSYGGRGRRGGGGFGGRDYRLSSDYGYGGNGGVYSSSGSSYSGGG 533
Query: 482 ----RRSGGDDWSSGGRRPGGDDWSTEGRRSNGYS 574
R GG GG G +S R GYS
Sbjct: 534 GGYSSRGGGYSGRGGGYASRGGGYSGGASRGGGYS 568
[83][TOP]
>UniRef100_B5RIC3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (Fragment) n=1 Tax=Salmo
salar RepID=B5RIC3_SALSA
Length = 611
Score = 117 bits (294), Expect = 5e-25
Identities = 59/137 (43%), Positives = 88/137 (64%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA+E+S + + +S++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 294 TKKDANELSMNASIKQSSQSLHGDIPQKQREITLKGFRSGTFEVLVATNVAARGLDIPEV 353
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G F+ + P
Sbjct: 354 DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVEQKAGITFKRVGVP 413
Query: 368 PMEDLPELPTRQVVSTL 418
D+ + ++ V L
Sbjct: 414 TANDIIKSSSKDAVRFL 430
[84][TOP]
>UniRef100_C4CP01 ATP-dependent RNA helicase DbpA n=1 Tax=Sphaerobacter thermophilus
DSM 20745 RepID=C4CP01_9CHLR
Length = 526
Score = 117 bits (294), Expect = 5e-25
Identities = 58/127 (45%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKR DE++ L S A++ALHGD+SQ QR+R + FR G+ +L+ATDVA+RGLD+
Sbjct: 248 RTKRGVDELTQQLQSLGYAAEALHGDLSQVQRDRVMARFRSGQAELLIATDVAARGLDVE 307
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ +I+Y++P PE++VHR GRTGRAG+ GAA+ + T ++R + +ER G R
Sbjct: 308 GITHVINYDIPGDPESYVHRIGRTGRAGRAGAAITLVTPRERRLLREIERATGVRMTRRG 367
Query: 362 PPPMEDL 382
P E++
Sbjct: 368 VPTPEEV 374
[85][TOP]
>UniRef100_A3W347 Putative ATP-dependent RNA helicase protein n=1 Tax=Roseovarius sp.
217 RepID=A3W347_9RHOB
Length = 438
Score = 117 bits (294), Expect = 5e-25
Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 2/189 (1%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +D+++ L + A +HG+ SQ QRER L FR G+ +LVATDVA+RGLDIP
Sbjct: 253 RTKHGSDKLAKRLEQAGFAVATIHGNKSQGQRERALKAFRDGQVKILVATDVAARGLDIP 312
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAGK+GAA+ + + +++ +G+
Sbjct: 313 DVKHVYNYELPNVPDNYVHRIGRTARAGKDGAAIAFCAPDEMGELKDIQKVLGTTIPVAS 372
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRR-PGGDD 538
P E LP+ + + S G R G GG + G+ G +G RR PGG
Sbjct: 373 GRPWEVLPDPKSPKPTSARGGPRRRSGGGGFGGG--AQHGKPQGKPGAGAGRRRKPGG-- 428
Query: 539 WSTEGRRSN 565
G+RSN
Sbjct: 429 -GGSGQRSN 436
[86][TOP]
>UniRef100_Q6CLR3 ATP-dependent RNA helicase DED1 n=1 Tax=Kluyveromyces lactis
RepID=DED1_KLULA
Length = 627
Score = 117 bits (294), Expect = 5e-25
Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Frame = +2
Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR AD ++ + + + A+HGD +Q +RER L F+ GR T+LVAT VA+RGLDIPN
Sbjct: 425 TKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPN 484
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
V +I+++LP+ + +VHR GRTGRAG G A F K +V +
Sbjct: 485 VTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNK--------NVAKELVSLLS 536
Query: 365 PPMEDLPELPT---RQVVSTLGRDRSNQRGYRTGGD--DWSSGGRRSGGDDWSSGGRRPG 529
+++P T R+ S G R + GY G D+ GG SGG +SSGG G
Sbjct: 537 EANQEVPSFLTTIMREASSGRGGARGGRGGYNRGNSTRDFRRGGAPSGG--FSSGGGSSG 594
Query: 530 GDDWSTEGRRSNGY 571
G W G S G+
Sbjct: 595 G--WGNGGGSSGGW 606
[87][TOP]
>UniRef100_A9WHF7 DEAD/DEAH box helicase domain protein n=2 Tax=Chloroflexus
RepID=A9WHF7_CHLAA
Length = 552
Score = 117 bits (293), Expect = 6e-25
Identities = 65/162 (40%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RT+++AD+I L A+++LHGD+SQ R+R + FR+G+ VLVATDVA+RGLDI
Sbjct: 247 RTRQEADDIGERLQGRGYAAESLHGDLSQAARDRVMRRFREGQLDVLVATDVAARGLDIA 306
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
V +I+Y++P PE++VHR GRTGRAG+EG A+ T ++R + +ER +R E +
Sbjct: 307 EVSHVINYDVPTDPESYVHRIGRTGRAGREGVAITFITPRERRMLQIIERVTRTRIERCQ 366
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQ--RGYRTGGDDWSSGG 481
P + D+ +V L ++ GY T D+ + G
Sbjct: 367 MPTLADVAARRRSALVDQLRTAMADPALAGYTTLVDELAGTG 408
[88][TOP]
>UniRef100_C9D3E2 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Silicibacter sp.
TrichCH4B RepID=C9D3E2_9RHOB
Length = 442
Score = 117 bits (293), Expect = 6e-25
Identities = 75/189 (39%), Positives = 102/189 (53%), Gaps = 1/189 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +++ L + + A+HG+ SQ QRER L F+ G TVLVATDVA+RGLDIP
Sbjct: 253 RTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLVATDVAARGLDIP 312
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ +G
Sbjct: 313 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAIQKTMGITIPVAS 372
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
E+LP+ P + GR R G R G GGRR G S G +PGG
Sbjct: 373 GRAWEELPD-PAAKPARGGGRGRPGGGGGRGKGSGKPGGGRRRFGGGKSEG--QPGGG-- 427
Query: 542 STEGRRSNG 568
E R S G
Sbjct: 428 --EARNSAG 434
[89][TOP]
>UniRef100_C7JDZ4 RNA helicase n=8 Tax=Acetobacter pasteurianus RepID=C7JDZ4_ACEP3
Length = 445
Score = 117 bits (293), Expect = 6e-25
Identities = 72/192 (37%), Positives = 107/192 (55%), Gaps = 7/192 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T K +A++++ L +++ ++A+HG+ SQ RER + GFR G VLVATD+A+RG+D+
Sbjct: 253 TLMKHEANKVAEFLNKNNVVAEAIHGNKSQGARERAMKGFRSGSVKVLVATDIAARGIDV 312
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+V + +Y+LP+ PE++VHR GRT RAG++G AV A Q+ + +ER +G +
Sbjct: 313 DDVSHVFNYDLPNVPESYVHRIGRTARAGRDGWAVSFCDAEQRAWLRDIERTIGKTVPVV 372
Query: 359 RPPPMEDL-PELPTRQ--VVSTLGRDRSNQRG---YRTGGDDWSSGGRRSGGDDWSSGGR 520
R P E T + V+ GR R RG R G + G GG S GG
Sbjct: 373 RDHPWHSAEAEASTMRPPVLGGGGRGRGGPRGGGAPRGGAPRGGAPGGGRGGPRRSGGGA 432
Query: 521 RPGGDDWSTEGR 556
R GG + GR
Sbjct: 433 RSGGRSGAPAGR 444
[90][TOP]
>UniRef100_C1MQ70 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MQ70_9CHLO
Length = 748
Score = 117 bits (293), Expect = 6e-25
Identities = 60/137 (43%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TKRD E+ +L + +KALHGD++Q QRE L GFR +F LVATDVA+RGLDI
Sbjct: 392 TKRDCGELQEALQKELEKGAKALHGDVNQAQREVVLAGFRANKFQTLVATDVAARGLDIS 451
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
V+L++ E P PET++HRSGRTGR G G V + T + + ++ER G +F+ I
Sbjct: 452 GVELVVQCEPPKEPETYIHRSGRTGRGGATGECVTLCTPRNEWAIPNIERKGGFKFQRIA 511
Query: 362 PPPMEDLPELPTRQVVS 412
PP ++ + V++
Sbjct: 512 PPQPAEMAAAAAKIVIA 528
[91][TOP]
>UniRef100_A4RW46 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RW46_OSTLU
Length = 654
Score = 117 bits (293), Expect = 6e-25
Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 2/122 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TKRD E+ +L I +KALHGD+SQ QRE L GFR+ +F VLVATDVA+RGLDI
Sbjct: 345 TKRDCGELCDNLQKEIPKGAKALHGDVSQGQREVVLAGFREDKFQVLVATDVAARGLDIT 404
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
V+L+I E P ET++HRSGRTGRAG G +V + T + V ++ER G +F I
Sbjct: 405 GVELVIQCEPPKDAETYIHRSGRTGRAGATGISVTLCTPRSEWAVPNIERKGGFKFVRIG 464
Query: 362 PP 367
PP
Sbjct: 465 PP 466
[92][TOP]
>UniRef100_A2Z376 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2Z376_ORYSI
Length = 685
Score = 117 bits (293), Expect = 6e-25
Identities = 64/129 (49%), Positives = 83/129 (64%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK A ++S + S +ALHGD++Q QRE L GFR G+F VLVAT+VA+RGLDI
Sbjct: 365 TETKESASDLSGLIAGS---RALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDIN 421
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V LII E P E ++HRSGRTGRAG G AV++F K V +ER+ G +FE I
Sbjct: 422 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHIS 481
Query: 362 PPPMEDLPE 388
P D+ +
Sbjct: 482 APQPTDVAQ 490
[93][TOP]
>UniRef100_B3L6M6 ATP-dependent helicase, putative n=1 Tax=Plasmodium knowlesi strain
H RepID=B3L6M6_PLAKH
Length = 722
Score = 117 bits (293), Expect = 6e-25
Identities = 59/128 (46%), Positives = 88/128 (68%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK +AD + S S++ LHG+I+Q RE T+ FRQG F +L+ATD+A+RGLDI
Sbjct: 408 TRTKLEADILCSEGSFKSLSFAVLHGNIAQTTREHTMQRFRQGMFQILIATDIAARGLDI 467
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
NVDL+I P+ E ++HR+GRTGRA K+G +VV+F++ K+ +I +E++ G +F
Sbjct: 468 SNVDLVIQCFPPNYAEIYIHRAGRTGRANKKGVSVVLFSSEDKQDLIKIEKNCGIKFSIE 527
Query: 359 RPPPMEDL 382
+ P ED+
Sbjct: 528 QLPNNEDV 535
[94][TOP]
>UniRef100_Q650T9 DEAD-box ATP-dependent RNA helicase 7 n=2 Tax=Oryza sativa Japonica
Group RepID=RH7_ORYSJ
Length = 696
Score = 117 bits (293), Expect = 6e-25
Identities = 64/129 (49%), Positives = 83/129 (64%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK A ++S + S +ALHGD++Q QRE L GFR G+F VLVAT+VA+RGLDI
Sbjct: 376 TETKESASDLSGLIAGS---RALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDIN 432
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V LII E P E ++HRSGRTGRAG G AV++F K V +ER+ G +FE I
Sbjct: 433 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHIS 492
Query: 362 PPPMEDLPE 388
P D+ +
Sbjct: 493 APQPTDVAQ 501
[95][TOP]
>UniRef100_A2YER4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2YER4_ORYSI
Length = 442
Score = 117 bits (292), Expect = 8e-25
Identities = 84/201 (41%), Positives = 106/201 (52%), Gaps = 12/201 (5%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR+AD + Y L S + A+HGD +Q +RE L F+ G ++VATDVASRGLD+PN
Sbjct: 209 TKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPN 268
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISL-------ERDVGS 343
V +I+Y+LP E +VHR GRTGRAGK G+A FT S L ++DV
Sbjct: 269 VAHVINYDLPKSVEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPD 328
Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGD-DWS---SGGRRSGGDDWSS 511
P R S G +R R +R G D D+S GG SGG S
Sbjct: 329 WLIQYAERPYYGGSSYGGRNRRSGGGGNRFAGRDFRQGSDYDYSGGGGGGGYSGGGGGYS 388
Query: 512 GGRRPGGDDWSTEGRRSNGYS 574
GG R GG +S+ GR GYS
Sbjct: 389 GGGRGGG--YSSGGR--GGYS 405
[96][TOP]
>UniRef100_UPI0000F2E9E9 PREDICTED: similar to Gu protein n=1 Tax=Monodelphis domestica
RepID=UPI0000F2E9E9
Length = 902
Score = 116 bits (291), Expect = 1e-24
Identities = 57/137 (41%), Positives = 87/137 (63%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S + + +++LHGDI Q QRE TL GFR G+F VLVAT+VA+RGLDIP V
Sbjct: 600 TKKEAQELSLNESIKQDAQSLHGDIPQKQREITLQGFRNGKFGVLVATNVAARGLDIPEV 659
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ + +ER G F+ + P
Sbjct: 660 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQKKEQHQLAQVERQAGITFKRVGVP 719
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 720 SASEIIKASSKDAIRFL 736
[97][TOP]
>UniRef100_Q1QZD4 DEAD/DEAH box helicase-like protein n=1 Tax=Chromohalobacter
salexigens DSM 3043 RepID=Q1QZD4_CHRSD
Length = 452
Score = 116 bits (291), Expect = 1e-24
Identities = 72/189 (38%), Positives = 104/189 (55%), Gaps = 1/189 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK A+ +S L + I + A+HG+ SQ R + LDGF+ G VLVATD+A+RGLDI
Sbjct: 251 RTKHGANRLSRHLEEAGIEAAAIHGNKSQNARTKALDGFKSGEIRVLVATDIAARGLDIN 310
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ ++++ELP+ E +VHR GRTGRAG G A+ + A + + + +ER + E
Sbjct: 311 QLPQVVNFELPNVAEDYVHRIGRTGRAGASGHAISLVCAEEGKELAGIERLIRQTLERQT 370
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
E P+ +VS G+ S + G D S GG+R GGD SG + GG+D
Sbjct: 371 IAGFE-----PSEALVS--GKGTSPRGGGGQRSDKPSGGGQRRGGDARKSGSGKQGGNDN 423
Query: 542 STEGRRSNG 568
R+ G
Sbjct: 424 PAARERNGG 432
[98][TOP]
>UniRef100_Q0APZ4 DEAD/DEAH box helicase domain protein n=1 Tax=Maricaulis maris
MCS10 RepID=Q0APZ4_MARMM
Length = 452
Score = 116 bits (291), Expect = 1e-24
Identities = 76/207 (36%), Positives = 108/207 (52%), Gaps = 16/207 (7%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
+RTK AD+I+ L + S A+HG+ SQ QR + LDGF+ G +LVATD+A+RG+D+
Sbjct: 252 SRTKHGADKINRHLVDYGLKSAAIHGNKSQAQRIKALDGFKTGAVKILVATDIAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER--------- 331
NV +++++LP+ PE++VHR GRT RAGK G AV M + + +ER
Sbjct: 312 DNVSHVVNHDLPNLPESYVHRIGRTARAGKSGVAVSMCEPGEYEYLRDIERLTGLDIDRV 371
Query: 332 DVGSRFEFI------RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG 493
VG +F+ P + + P R+ T GR R +G +GG R G
Sbjct: 372 FVGDEAKFLAEAKNATPAASQKKQQRPARKKPFTAGRARPQGQG---------NGGSRGG 422
Query: 494 GDDWSSGGRRPGGDDWSTEGRRSNGYS 574
G GG + GG S RR N S
Sbjct: 423 GQGGGQGGGQGGG---SKRPRRRNNRS 446
[99][TOP]
>UniRef100_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospirillum
ferrodiazotrophum RepID=C6HUU6_9BACT
Length = 472
Score = 116 bits (291), Expect = 1e-24
Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 7/193 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTKR A++++ L + S ALHGD SQ QR R L FR G+ +LVATDVA+RGLDI
Sbjct: 252 TRTKRGAEDLANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAGQTRILVATDVAARGLDI 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
V +I+Y+LP PE +VHR GRTGRAG+ G A+ + + + +ER +GS +
Sbjct: 312 DTVTCVINYDLPQSPEDYVHRIGRTGRAGRSGRAISFCHPADRNLLRDIERLLGSSVP-V 370
Query: 359 RP--PPMEDLPELPTRQ--VVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR-- 520
P PP + + P R S+ G RG RT D GR + GGR
Sbjct: 371 SPLSPPPQPKGDRPFRSSGPRSSGGPRPGGFRGERTFRSDAPGEGR----PGFRQGGRTD 426
Query: 521 RPGGDDWSTEGRR 559
RP G +E RR
Sbjct: 427 RPAGGSGRSEWRR 439
[100][TOP]
>UniRef100_B5ZLE2 DEAD/DEAH box helicase domain protein n=1 Tax=Gluconacetobacter
diazotrophicus PAl 5 RepID=B5ZLE2_GLUDA
Length = 390
Score = 116 bits (291), Expect = 1e-24
Identities = 55/122 (45%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK+ AD ++ +L T + + ALHGD Q +R+RTLD FR+GR VLVATDV +RG+D+
Sbjct: 268 TRTKQAADALARTLNTGGVTAAALHGDHGQVRRDRTLDDFRRGRLLVLVATDVMARGIDV 327
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+V L++++++P+ PET++HR GRT RAG+ G A+ + +++ + +ER G+R I
Sbjct: 328 EDVALVVNFDIPEQPETYIHRIGRTARAGRRGTALSLCDPAERLKLRDIERQSGARITVI 387
Query: 359 RP 364
P
Sbjct: 388 DP 389
[101][TOP]
>UniRef100_Q4QJI9 Nucleolar RNA helicase II, putative n=1 Tax=Leishmania major
RepID=Q4QJI9_LEIMA
Length = 674
Score = 116 bits (291), Expect = 1e-24
Identities = 57/141 (40%), Positives = 88/141 (62%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P
Sbjct: 348 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 406
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL+I P + F+HR+GRTGRAG++G V+++ ++ V +ER +F+ +
Sbjct: 407 MVDLVIQCAPPSDIDAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLP 466
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
P E++ + R L R
Sbjct: 467 APTREEILKAVARDAAEDLAR 487
[102][TOP]
>UniRef100_A9UPZ2 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UPZ2_MONBE
Length = 591
Score = 116 bits (291), Expect = 1e-24
Identities = 60/139 (43%), Positives = 84/139 (60%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TK+DA+E++ + LHGDI Q QRE +L FR G+ LVATDVA+RGLDIP
Sbjct: 255 TQTKKDANELALETDLRQEVQVLHGDIPQKQREMSLQAFRDGKVRCLVATDVAARGLDIP 314
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL++ E P E+++HRSGRTGRAG+ G + + +Q+ + +ER G F I
Sbjct: 315 EVDLVVQCEPPKDVESYIHRSGRTGRAGRTGTCICFYKPNQEDAMRYVERRAGISFRRIG 374
Query: 362 PPPMEDLPELPTRQVVSTL 418
P ED+ + R +L
Sbjct: 375 APQPEDVIKASARDAFRSL 393
[103][TOP]
>UniRef100_A4HSE3 Nucleolar RNA helicase II, putative (Fragment) n=1 Tax=Leishmania
infantum RepID=A4HSE3_LEIIN
Length = 629
Score = 116 bits (291), Expect = 1e-24
Identities = 57/141 (40%), Positives = 88/141 (62%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P
Sbjct: 348 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 406
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL+I P + F+HR+GRTGRAG++G V+++ ++ V +ER +F+ +
Sbjct: 407 MVDLVIQCAPPSDIDAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLP 466
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
P E++ + R L R
Sbjct: 467 APTREEILKAVARDAAEDLAR 487
[104][TOP]
>UniRef100_A4H460 Nucleolar RNA helicase II, putative n=1 Tax=Leishmania braziliensis
RepID=A4H460_LEIBR
Length = 689
Score = 116 bits (291), Expect = 1e-24
Identities = 57/141 (40%), Positives = 88/141 (62%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P
Sbjct: 348 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 406
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL+I P + F+HR+GRTGRAG++G V+++ ++ V +ER +F+ +
Sbjct: 407 MVDLVIQCAPPSDIDAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLP 466
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
P E++ + R L R
Sbjct: 467 APTREEILKAVARDAAEDLAR 487
[105][TOP]
>UniRef100_Q8TFK8 ATP-dependent RNA helicase DED1 n=1 Tax=Candida glabrata
RepID=DED1_CANGA
Length = 617
Score = 116 bits (291), Expect = 1e-24
Identities = 79/187 (42%), Positives = 103/187 (55%), Gaps = 5/187 (2%)
Frame = +2
Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR AD+++ + + + ++ A+HGD SQ +RER L FR GR +LVAT VA+RGLDIPN
Sbjct: 411 TKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPN 470
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
V +I+Y+LP + +VHR GRTGRAG G A F V L + + I P
Sbjct: 471 VTHVINYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQEI-P 529
Query: 365 PPMED-LPELP---TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
P +ED L E+ + ST G SN R YR G + S G+ S W G R GG
Sbjct: 530 PFLEDCLREVSFSRSGSNRSTRGNRSSNTRDYRKHGGN-GSFGQNSRNSSW--GSARGGG 586
Query: 533 DDWSTEG 553
ST G
Sbjct: 587 FGGSTGG 593
[106][TOP]
>UniRef100_B7EZD4 cDNA clone:002-104-C03, full insert sequence n=2 Tax=Oryza sativa
Japonica Group RepID=B7EZD4_ORYSJ
Length = 478
Score = 116 bits (290), Expect = 1e-24
Identities = 78/198 (39%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR+AD + Y L S + A+HGD +Q +RE L F+ G ++VATDVASRGLD+PN
Sbjct: 236 TKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPN 295
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISL-------ERDVGS 343
V +I+Y+LP E +VHR GRTGRAGK G+A FT S L ++DV
Sbjct: 296 VAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPD 355
Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG-GDDWSSGGRRSGGDDWSSGGR 520
P R S G +R R +R G G +S GG G GG
Sbjct: 356 WLVQYAERPYYGGSSYGGRNRRSGGGGNRFAGRDFRQGSGGGYSGGGGGGGYSGGGGGGG 415
Query: 521 RPGGDDWSTEGRRSNGYS 574
GG + G R GYS
Sbjct: 416 YSGGGGGYSGGGRGGGYS 433
[107][TOP]
>UniRef100_A9HRM2 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Gluconacetobacter
diazotrophicus PAl 5 RepID=A9HRM2_GLUDA
Length = 390
Score = 116 bits (290), Expect = 1e-24
Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK+ AD ++ +L T + + ALHGD Q +R+RTLD FR+GR VLVATDV +RG+D+
Sbjct: 268 TRTKQAADALARTLNTGGVTAAALHGDHGQVRRDRTLDDFRRGRLLVLVATDVMARGIDV 327
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
V L++++++P+ PET++HR GRT RAG+ G A+ + +++ + +ER G+R I
Sbjct: 328 EGVALVVNFDIPEQPETYIHRIGRTARAGRRGTALSLCDPAERLKLRDIERQSGARITVI 387
Query: 359 RP 364
P
Sbjct: 388 DP 389
[108][TOP]
>UniRef100_C2M5Y9 ATP-dependent RNA helicase, DEAD/DEAH box family n=1
Tax=Capnocytophaga gingivalis ATCC 33624
RepID=C2M5Y9_CAPGI
Length = 588
Score = 116 bits (290), Expect = 1e-24
Identities = 57/139 (41%), Positives = 90/139 (64%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD ++ L + ALHGD+SQ QR+ + GFR + +LVATDVA+RG+D+
Sbjct: 257 RTKRDTQAVAEKLIEDGYNAAALHGDLSQNQRDLVMKGFRAKQIQMLVATDVAARGIDVD 316
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
++ +IHY+LPD ET+ HRSGRTGRAGK G ++V+ T S+ + + ++E+ + FE+
Sbjct: 317 DITHVIHYQLPDEIETYTHRSGRTGRAGKSGVSMVILTKSEAKRIKTIEKIIQKTFEYKS 376
Query: 362 PPPMEDLPELPTRQVVSTL 418
P ++ E+ + +T+
Sbjct: 377 IPSGMEICEIQLYHLANTI 395
[109][TOP]
>UniRef100_B6R9I6 Dead/deah box helicase domain protein n=1 Tax=Pseudovibrio sp.
JE062 RepID=B6R9I6_9RHOB
Length = 483
Score = 116 bits (290), Expect = 1e-24
Identities = 74/195 (37%), Positives = 108/195 (55%), Gaps = 10/195 (5%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTKR AD +S L + ++S A+HG+ SQ RE++LDGF+ GR +LVATD+A+RG+DI
Sbjct: 252 TRTKRGADRVSGHLEKAGLSSAAIHGNKSQRNREKSLDGFKNGRIKILVATDIAARGIDI 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF--- 349
V +++YELP+ PE +VHR GRT RAGK G AV + A+++ + +ER +G +
Sbjct: 312 DGVSHVVNYELPNVPEAYVHRIGRTARAGKSGVAVSLCDATEQPYLRDIERLIGRKIPSG 371
Query: 350 EFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRT----GGDDWSSG--GRRSGGDDWSS 511
+ D+ L R + Q R GG + S+G GR + G +
Sbjct: 372 DSDWDGASGDVSTFDPTAEPQRLKRHKRPQNNRRRNGGGGGANRSAGGAGRAAQGKAGEN 431
Query: 512 GGRRPGGDDWSTEGR 556
G R G + GR
Sbjct: 432 GARPAGAKPNAGRGR 446
[110][TOP]
>UniRef100_A3UIW5 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=1
Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UIW5_9RHOB
Length = 466
Score = 116 bits (290), Expect = 1e-24
Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 3/179 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD ++ L + A+HGD SQ QR R LD F+ G VLVATD+A+RG+D+
Sbjct: 269 TRTKYGADRVAKRLVKYGHKANAIHGDKSQNQRTRALDAFKSGEAPVLVATDIAARGIDV 328
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
VDL+++YELP+ E +VHR GRT RAG G AV + ++ + +E+ +G +
Sbjct: 329 DGVDLVVNYELPNVAENYVHRIGRTARAGASGRAVALCAPDERVMLKDIEKTMGVTIQ-- 386
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG--GDDWSSGGRRPG 529
+ D P +P + + R R +RG G D + S + S GG R G
Sbjct: 387 ---GLNDAPPMPKGEAAKSKRRRRGGRRGQGQGQGDGGGQAQASAPRSGEGSKGGPRGG 442
[111][TOP]
>UniRef100_A5KAX3 ATP-dependent helicase, putative n=1 Tax=Plasmodium vivax
RepID=A5KAX3_PLAVI
Length = 720
Score = 116 bits (290), Expect = 1e-24
Identities = 58/128 (45%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK +AD + S S++ LHG+I+Q RE T+ FRQG F +L+ATD+A+RGLDI
Sbjct: 406 TRTKLEADILCSEGSFKSLSFAVLHGNIAQTTREHTMQRFRQGMFQILIATDIAARGLDI 465
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
NVDL+I P+ E ++HR+GRTGRA K+G +VV+F+ K+ ++ +E++ G +F
Sbjct: 466 SNVDLVIQCFPPNYAEIYIHRAGRTGRANKKGISVVLFSTEDKQDLVKIEKNCGIKFSIE 525
Query: 359 RPPPMEDL 382
+ P ED+
Sbjct: 526 QLPNNEDV 533
[112][TOP]
>UniRef100_Q0DB53 DEAD-box ATP-dependent RNA helicase 52A n=2 Tax=Oryza sativa
Japonica Group RepID=RH52A_ORYSJ
Length = 602
Score = 116 bits (290), Expect = 1e-24
Identities = 78/198 (39%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR+AD + Y L S + A+HGD +Q +RE L F+ G ++VATDVASRGLD+PN
Sbjct: 360 TKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPN 419
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISL-------ERDVGS 343
V +I+Y+LP E +VHR GRTGRAGK G+A FT S L ++DV
Sbjct: 420 VAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPD 479
Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG-GDDWSSGGRRSGGDDWSSGGR 520
P R S G +R R +R G G +S GG G GG
Sbjct: 480 WLVQYAERPYYGGSSYGGRNRRSGGGGNRFAGRDFRQGSGGGYSGGGGGGGYSGGGGGGG 539
Query: 521 RPGGDDWSTEGRRSNGYS 574
GG + G R GYS
Sbjct: 540 YSGGGGGYSGGGRGGGYS 557
[113][TOP]
>UniRef100_UPI0001984BEC PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984BEC
Length = 1226
Score = 115 bits (289), Expect = 2e-24
Identities = 70/178 (39%), Positives = 97/178 (54%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+ D+++ +LT + A+HGD SQ +R+ L+ FR GR VLVATDVA+RGLDI ++
Sbjct: 416 TKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDI 475
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
++I+Y+ P G E +VHR GRTGRAG G A F + L + + + + PP
Sbjct: 476 RVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRV-PP 534
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
+ D+ G RS + G TGG D GGR +D S GGR G W
Sbjct: 535 EIRDMASRGG-------GMGRSRRWGSGTGGRDGGRGGR----NDSSYGGRDGGRGGW 581
[114][TOP]
>UniRef100_C5X615 Putative uncharacterized protein Sb02g030210 n=1 Tax=Sorghum
bicolor RepID=C5X615_SORBI
Length = 711
Score = 115 bits (289), Expect = 2e-24
Identities = 65/129 (50%), Positives = 83/129 (64%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK A E+S + S +ALHGD+ Q QRE L GFR G+F VLVAT+VA+RGLDI
Sbjct: 383 TETKDSASELSGLIPGS---RALHGDVVQAQREVILAGFRGGKFQVLVATNVAARGLDIN 439
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V LII E P E ++HRSGRTGRAG G AV+++ K +V LER+ G +FE I
Sbjct: 440 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKYSVNRLERESGVKFEHIS 499
Query: 362 PPPMEDLPE 388
P D+ +
Sbjct: 500 APQPTDVAQ 508
[115][TOP]
>UniRef100_A7PM74 Chromosome chr14 scaffold_21, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PM74_VITVI
Length = 642
Score = 115 bits (289), Expect = 2e-24
Identities = 70/178 (39%), Positives = 97/178 (54%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+ D+++ +LT + A+HGD SQ +R+ L+ FR GR VLVATDVA+RGLDI ++
Sbjct: 395 TKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDI 454
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
++I+Y+ P G E +VHR GRTGRAG G A F + L + + + + PP
Sbjct: 455 RVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRV-PP 513
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
+ D+ G RS + G TGG D GGR +D S GGR G W
Sbjct: 514 EIRDMASRGG-------GMGRSRRWGSGTGGRDGGRGGR----NDSSYGGRDGGRGGW 560
[116][TOP]
>UniRef100_UPI0000D9C370 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
isoform 1 n=1 Tax=Macaca mulatta RepID=UPI0000D9C370
Length = 697
Score = 115 bits (288), Expect = 2e-24
Identities = 57/137 (41%), Positives = 87/137 (63%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P
Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 567 SATEIIKASSKDAIRLL 583
[117][TOP]
>UniRef100_UPI0000D9C36F PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
isoform 3 n=1 Tax=Macaca mulatta RepID=UPI0000D9C36F
Length = 783
Score = 115 bits (288), Expect = 2e-24
Identities = 57/137 (41%), Positives = 87/137 (63%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P
Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 567 SATEIIKASSKDAIRLL 583
[118][TOP]
>UniRef100_UPI0000D9C36E PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21
isoform 2 n=1 Tax=Macaca mulatta RepID=UPI0000D9C36E
Length = 745
Score = 115 bits (288), Expect = 2e-24
Identities = 57/137 (41%), Positives = 87/137 (63%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P
Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 567 SATEIIKASSKDAIRLL 583
[119][TOP]
>UniRef100_UPI00004E8925 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Pan
troglodytes RepID=UPI00004E8925
Length = 783
Score = 115 bits (288), Expect = 2e-24
Identities = 57/137 (41%), Positives = 87/137 (63%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P
Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 567 SATEIIKASSKDAIRLL 583
[120][TOP]
>UniRef100_Q1W0A0 Putative RNA helicase dead-box protein n=1 Tax=Psychroflexus
torquis ATCC 700755 RepID=Q1W0A0_9FLAO
Length = 586
Score = 115 bits (288), Expect = 2e-24
Identities = 55/116 (47%), Positives = 84/116 (72%), Gaps = 1/116 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRDA +++ L ++ ALHGD+SQ QR+ ++ FR+ + +LVATDVA+RG+D+
Sbjct: 250 RTKRDAQKVAEKLIEDGYSASALHGDLSQAQRDMVMNSFRRKQIQMLVATDVAARGIDVD 309
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF 349
++ +I+Y+LPD E + HRSGRTGRAGKEG ++V+ T S+ R + +ER +G +F
Sbjct: 310 DITHVINYQLPDEIEIYTHRSGRTGRAGKEGKSLVIVTKSEVRKIKQVERMIGQKF 365
[121][TOP]
>UniRef100_C1FFV4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FFV4_9CHLO
Length = 631
Score = 115 bits (288), Expect = 2e-24
Identities = 60/136 (44%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TKRD E+ +L + +KALHGD++Q QRE LDGFR+ +F LVATDVA+RGLDI
Sbjct: 291 TKRDCGELQEALQKELEKGAKALHGDVNQSQREVVLDGFRKNKFQTLVATDVAARGLDIS 350
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
V+L++ E P ET++HRSGRTGR G G V + T + + ++ER G +F I
Sbjct: 351 GVELVVQCEPPKEAETYIHRSGRTGRGGATGICVTLCTPRNEWAIPNIERKGGFKFVRIG 410
Query: 362 PPPMEDLPELPTRQVV 409
PP ++ + V+
Sbjct: 411 PPQPAEMVAAAAKIVI 426
[122][TOP]
>UniRef100_Q9NR30 Nucleolar RNA helicase 2 n=2 Tax=Homo sapiens RepID=DDX21_HUMAN
Length = 783
Score = 115 bits (288), Expect = 2e-24
Identities = 57/137 (41%), Positives = 87/137 (63%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P
Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 567 SATEIIKASSKDAIRLL 583
[123][TOP]
>UniRef100_UPI0001B412DE ATP-dependent RNA helicase RhlE n=2 Tax=Burkholderia thailandensis
RepID=UPI0001B412DE
Length = 515
Score = 115 bits (287), Expect = 3e-24
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 318 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 377
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 378 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 430
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS--SGGR---- 520
R P ++ E + DR N RG R GG +GGRR GG GGR
Sbjct: 431 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGG----NGGRRFGGKPGGGHGGGRSGGW 485
Query: 521 --RPGGDDWSTEGRRSNG 568
+PGG+ RRS+G
Sbjct: 486 SGKPGGNREGYGARRSDG 503
[124][TOP]
>UniRef100_UPI00016A53FE ATP-dependent RNA helicase RhlE n=1 Tax=Burkholderia thailandensis
TXDOH RepID=UPI00016A53FE
Length = 517
Score = 115 bits (287), Expect = 3e-24
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 320 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 379
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 380 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 432
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS--SGGR---- 520
R P ++ E + DR N RG R GG +GGRR GG GGR
Sbjct: 433 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGG----NGGRRFGGKPGGGHGGGRSGGW 487
Query: 521 --RPGGDDWSTEGRRSNG 568
+PGG+ RRS+G
Sbjct: 488 SGKPGGNREGYGARRSDG 505
[125][TOP]
>UniRef100_UPI00016E0718 UPI00016E0718 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E0718
Length = 603
Score = 115 bits (287), Expect = 3e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A+E+S + + ++++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 288 TKKEANELSMNASIKQSTQSLHGDIPQKQRETTLKGFRNGSFEVLVATNVAARGLDIPEV 347
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P
Sbjct: 348 DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP 407
Query: 368 PMEDLPELPTRQVVSTL 418
D+ + ++ V L
Sbjct: 408 TANDIIKSSSKDAVRFL 424
[126][TOP]
>UniRef100_UPI00016E06FD UPI00016E06FD related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E06FD
Length = 680
Score = 115 bits (287), Expect = 3e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A+E+S + + ++++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 364 TKKEANELSMNASIKQSTQSLHGDIPQKQRETTLKGFRNGSFEVLVATNVAARGLDIPEV 423
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P
Sbjct: 424 DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP 483
Query: 368 PMEDLPELPTRQVVSTL 418
D+ + ++ V L
Sbjct: 484 TANDIIKSSSKDAVRFL 500
[127][TOP]
>UniRef100_B1H1J4 Ddx21 protein n=1 Tax=Danio rerio RepID=B1H1J4_DANRE
Length = 759
Score = 115 bits (287), Expect = 3e-24
Identities = 58/137 (42%), Positives = 88/137 (64%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S + + ++++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 427 TKKEATELSLNTSIKQSAQSLHGDIPQKQREVTLKGFRNGSFEVLVATNVAARGLDIPEV 486
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P+ E+++HRSGRTGRAG+ G + + ++ + +E+ G F+ + P
Sbjct: 487 DLVIQSSPPNDVESYIHRSGRTGRAGRTGICICFYQRKEESQLKFVEQKAGITFKRVGVP 546
Query: 368 PMEDLPELPTRQVVSTL 418
D+ + ++ V L
Sbjct: 547 TAYDIIQSSSKDAVRFL 563
[128][TOP]
>UniRef100_Q2SX26 ATP-dependent RNA helicase RhlE n=1 Tax=Burkholderia thailandensis
E264 RepID=Q2SX26_BURTA
Length = 482
Score = 115 bits (287), Expect = 3e-24
Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 285 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 344
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 345 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 397
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS--SGGR---- 520
R P ++ E + DR N RG R GG +GGRR GG GGR
Sbjct: 398 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGG----NGGRRFGGKPGGGHGGGRSGGW 452
Query: 521 --RPGGDDWSTEGRRSNG 568
+PGG+ RRS+G
Sbjct: 453 SGKPGGNREGYGARRSDG 470
[129][TOP]
>UniRef100_B8G3I5 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroflexus
aggregans DSM 9485 RepID=B8G3I5_CHLAD
Length = 550
Score = 115 bits (287), Expect = 3e-24
Identities = 57/127 (44%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RT+++ DEI L A+++LHGD+SQ R+R + FR+G+ VLVATDVA+RGLDI
Sbjct: 247 RTRQEVDEIGERLQGRGYAAESLHGDLSQAVRDRVMRRFREGQLDVLVATDVAARGLDIA 306
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
V +I+Y++P PE++VHR GRTGRAG+ G A+ T ++R + ++ER +R E +
Sbjct: 307 EVSHVINYDVPTDPESYVHRIGRTGRAGRAGVAITFITPRERRMLQTIERVTRTRIERCQ 366
Query: 362 PPPMEDL 382
P + D+
Sbjct: 367 MPTLADV 373
[130][TOP]
>UniRef100_A9AHR3 ATP-dependent RNA helicase n=1 Tax=Burkholderia multivorans ATCC
17616 RepID=A9AHR3_BURM1
Length = 505
Score = 115 bits (287), Expect = 3e-24
Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 303 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 362
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS----- 343
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S
Sbjct: 363 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIERFVRSPLPVN 422
Query: 344 ---RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514
FE + PP D R GR + G GG S GG GG G
Sbjct: 423 VIEGFEPRKTPPRNDRSNGRGRPGGGNGGRRFGGKPGGGHGGHGRSYGGGNGGGWSGKPG 482
Query: 515 GRRPGGDDWSTEGRRSNG 568
R GG +G+RS+G
Sbjct: 483 ASRDGG---RRDGQRSSG 497
[131][TOP]
>UniRef100_C8WL27 DEAD/DEAH box helicase domain protein n=1 Tax=Eggerthella lenta DSM
2243 RepID=C8WL27_9ACTN
Length = 508
Score = 115 bits (287), Expect = 3e-24
Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 5/192 (2%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK ++ + +L + ++++H D SQ QR+R LD FR+GR ++LVATDV +RG+D+P
Sbjct: 251 RTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTSILVATDVLARGIDVP 310
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+VD +I+++LPD PE +VHR GRTGRAG++G AV T +RT+ +E+ +G
Sbjct: 311 DVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRTMSDIEKLIGKNV---- 366
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG--GDDWSSGGRRSGGDDWSSGGRR--PG 529
P+ +L V G+ + ++G G G +G +RS D G +R
Sbjct: 367 --PLMELETYELDMTVLEKGKKGAPKKGGYKGNKGSGRPAGAKRS---DKRGGEKRDFER 421
Query: 530 GDDWSTEGRRSN 565
D EGR N
Sbjct: 422 RSDSRAEGRSDN 433
[132][TOP]
>UniRef100_B9BFM7 Dead/deah box helicase n=1 Tax=Burkholderia multivorans CGD1
RepID=B9BFM7_9BURK
Length = 506
Score = 115 bits (287), Expect = 3e-24
Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 303 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 362
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS----- 343
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S
Sbjct: 363 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIERFVRSPLPVN 422
Query: 344 ---RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514
FE + PP D R GR + G GG S GG GG G
Sbjct: 423 VIEGFEPRKTPPRNDRGNGRGRPGGGNGGRRFGGKPGGGHGGHGRSYGGGNGGGWSGKPG 482
Query: 515 GRRPGGDDWSTEGRRSNG 568
R GG +G+RS+G
Sbjct: 483 ASRDGGS--RRDGQRSSG 498
[133][TOP]
>UniRef100_B1GAN7 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia graminis
C4D1M RepID=B1GAN7_9BURK
Length = 537
Score = 115 bits (287), Expect = 3e-24
Identities = 74/191 (38%), Positives = 100/191 (52%), Gaps = 2/191 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 322 TATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIKALRERRVRVLVATDVAARGIDI 381
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 382 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 434
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG-GDDWSSGGRRSGGDDWSSGGRRPGGD 535
R P LP VV R + R G G GG SGG + SG +P G
Sbjct: 435 RTP-------LPVNVVVGFEPRKSAPSGNGRPGFGGRGRPGGGNSGGRRFGSGSGKPAGS 487
Query: 536 DWSTEGRRSNG 568
S+ NG
Sbjct: 488 AGSSRSGSGNG 498
[134][TOP]
>UniRef100_A6FZH1 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Plesiocystis
pacifica SIR-1 RepID=A6FZH1_9DELT
Length = 437
Score = 115 bits (287), Expect = 3e-24
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 4/191 (2%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
+RTK A+ I+ L+++ ++S A+HG+ SQ R R L+ F+ G VLVATD+A+RGLDI
Sbjct: 249 SRTKHGANRIAKHLSAAGVSSAAIHGNKSQNARTRALEAFKGGELRVLVATDIAARGLDI 308
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
V +I+++LP+ PET++HR GRT RAG G A+ ++ ++ +ER + + E I
Sbjct: 309 SKVSHVINFDLPNVPETYIHRIGRTARAGNSGIALSFCDVEERAYLVDIERLLRAHIERI 368
Query: 359 RP---PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529
PP + LPEL + + + + G + SSG R G GG+R G
Sbjct: 369 EDHGYPPSQALPEL--TDLAARRSGSKPGGGAKKKSGANKSSGRRGGRGGGGRRGGKRGG 426
Query: 530 GDDWSTEGRRS 562
G + RS
Sbjct: 427 GGGPRGQASRS 437
[135][TOP]
>UniRef100_A6VJ89 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus
maripaludis C7 RepID=A6VJ89_METM7
Length = 546
Score = 115 bits (287), Expect = 3e-24
Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
+TK D DEIS LT A++ LHGD++Q QRE+TLD F+ + VLVATDVA+RG+DI
Sbjct: 249 KTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARKINVLVATDVAARGIDIN 308
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
++ +++Y++P PE++VHR GRTGRAGK+G AV S+ R +++ +
Sbjct: 309 DLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYIQKIANTEIRKEE 368
Query: 362 PPPMEDLPELPTRQVVS 412
P ++D+ R++VS
Sbjct: 369 VPDVKDIIGAKKRKIVS 385
[136][TOP]
>UniRef100_UPI0001983370 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001983370
Length = 1864
Score = 114 bits (286), Expect = 4e-24
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+ D+++ S+ + + +HGD SQ +R+ L+ FR G+ +LVATDVA+RGLDI ++
Sbjct: 752 TKKLCDQLARSIGRNFGAAVIHGDKSQVERDWVLNQFRSGKSPILVATDVAARGLDIKDI 811
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
++I+Y+ P G E +VHR GRTGRAG G + F+ + L + + + + PP
Sbjct: 812 RVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDCKYAADLIKVLEGANQRV-PP 870
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDD--WSSGGRRSGGDDWSSGGRRPGGDDW 541
+ D+ + G+DR + +GG W SGGR SG D GGR G D
Sbjct: 871 EVRDM----ALRSGPGFGKDRGGVNRFDSGGGGGRWDSGGRGSGMRDGGFGGRGSGMRDG 926
Query: 542 STEGR 556
GR
Sbjct: 927 GFGGR 931
[137][TOP]
>UniRef100_Q1D514 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Myxococcus xanthus
DK 1622 RepID=Q1D514_MYXXD
Length = 501
Score = 114 bits (286), Expect = 4e-24
Identities = 71/193 (36%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK A+ ++ L + ++S A+HG+ SQ RER LD FR G VLVATD+A+RG+DI
Sbjct: 251 TRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVATDIAARGIDI 310
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +++Y+LP+ PE +VHR GRTGRAG G AV A ++ + +ER + +
Sbjct: 311 DGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIERTIRRNVPVV 370
Query: 359 RPPPMEDLPELPTRQVVSTLG---RDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529
P P R V G R + G R G +G GG + RR G
Sbjct: 371 EDHPYRSGQPAP-RPVSHASGAAPEARPSGNGGRPQGTPRPAGNGGGGGHSAGASRRRRG 429
Query: 530 GDDWSTEGRRSNG 568
G + G R G
Sbjct: 430 GRGGAGGGGRGQG 442
[138][TOP]
>UniRef100_B9L0R0 Cold-shock dead-box protein a n=1 Tax=Thermomicrobium roseum DSM
5159 RepID=B9L0R0_THERP
Length = 534
Score = 114 bits (286), Expect = 4e-24
Identities = 56/127 (44%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK ADE+++ L S A++A+HGD+SQ R+R + FR G+ +L+ATDVA+RGLDIP
Sbjct: 258 RTKSGADELAHKLQSLGYAAEAIHGDLSQAMRDRAMQRFRAGQVDLLIATDVAARGLDIP 317
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
V +I++++P PE++VHR GRTGRAG G A+ + ++ + ++ER +G R R
Sbjct: 318 AVSHVINFDIPSDPESYVHRIGRTGRAGATGTAITLIEPRERWLLRTIERAIGQRLIPKR 377
Query: 362 PPPMEDL 382
P E++
Sbjct: 378 IPTREEI 384
[139][TOP]
>UniRef100_B2JIF5 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia phymatum
STM815 RepID=B2JIF5_BURP8
Length = 556
Score = 114 bits (286), Expect = 4e-24
Identities = 73/192 (38%), Positives = 100/192 (52%), Gaps = 2/192 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD ++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 307 TATKSDADMLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 366
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 367 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 419
Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGD 535
R P P+ + R+ GR RG GG +GGRR GG G R G
Sbjct: 420 RAPLPVNVVEGFEPRRAPPAGGRGGFGGRGRPGGG----NGGRRFGGKPAGYGSREGNGG 475
Query: 536 DWSTEGRRSNGY 571
+ + GY
Sbjct: 476 GYGSRDGNRGGY 487
[140][TOP]
>UniRef100_A7NVW1 Chromosome chr5 scaffold_2, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVW1_VITVI
Length = 837
Score = 114 bits (286), Expect = 4e-24
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+ D+++ S+ + + +HGD SQ +R+ L+ FR G+ +LVATDVA+RGLDI ++
Sbjct: 424 TKKLCDQLARSIGRNFGAAVIHGDKSQVERDWVLNQFRSGKSPILVATDVAARGLDIKDI 483
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
++I+Y+ P G E +VHR GRTGRAG G + F+ + L + + + + PP
Sbjct: 484 RVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDCKYAADLIKVLEGANQRV-PP 542
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDD--WSSGGRRSGGDDWSSGGRRPGGDDW 541
+ D+ + G+DR + +GG W SGGR SG D GGR G D
Sbjct: 543 EVRDM----ALRSGPGFGKDRGGVNRFDSGGGGGRWDSGGRGSGMRDGGFGGRGSGMRDG 598
Query: 542 STEGR 556
GR
Sbjct: 599 GFGGR 603
[141][TOP]
>UniRef100_B7SED9 Vasa-like protein n=1 Tax=Apostichopus japonicus RepID=B7SED9_STIJA
Length = 530
Score = 114 bits (286), Expect = 4e-24
Identities = 72/197 (36%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Frame = +2
Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKR AD + SY S + ++HGD Q +RE L+ F++ R +VLVAT VASRGLDI
Sbjct: 329 TETKRGADFLASYLSQSGFPTTSIHGDREQREREEALNDFKRNRASVLVATSVASRGLDI 388
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P V +++++LP + +VHR GRTGR G G + + + T + I
Sbjct: 389 PAVKHVVNFDLPSEIDDYVHRIGRTGRCGNTGLSTSFYNPEKDAT-------ISRALIKI 441
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD-------DWSSGG 517
+D+PE S +G N G GG D SG RR GG DW+SGG
Sbjct: 442 LADAHQDVPEFLENVADSAIGTYHGNTGG-GFGGRDTRSGPRRGGGGGGNRGNRDWNSGG 500
Query: 518 RRPGGDDWSTEGRRSNG 568
+ G + W++ G G
Sbjct: 501 QGGGQESWNSGGGGGGG 517
[142][TOP]
>UniRef100_UPI0001984F7F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F7F
Length = 711
Score = 114 bits (285), Expect = 5e-24
Identities = 63/139 (45%), Positives = 86/139 (61%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK A E++ L + +ALHGDI Q QRE TL GFR G+F LVAT+VA+RGLDI
Sbjct: 380 TETKDSASELAGLLPGA---RALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDIN 436
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V LII E P E ++HRSGRTGRAG G AV++F ++ + +ER+ G +FE +
Sbjct: 437 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLFD-PRRSNISKIERESGVKFEHVS 495
Query: 362 PPPMEDLPELPTRQVVSTL 418
P D+ + + T+
Sbjct: 496 APQPADIAKSAGVEAAGTI 514
[143][TOP]
>UniRef100_UPI00005A07BE PREDICTED: similar to Nucleolar RNA helicase II (Nucleolar RNA
helicase Gu) (RH II/Gu) (DEAD-box protein 21) n=1
Tax=Canis lupus familiaris RepID=UPI00005A07BE
Length = 784
Score = 114 bits (285), Expect = 5e-24
Identities = 57/137 (41%), Positives = 88/137 (64%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S +++ +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 448 TKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 507
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 508 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVP 567
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 568 SATEIIKASSKDAIRLL 584
[144][TOP]
>UniRef100_UPI00004BFC84 Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA helicase II)
(Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD
box protein 21). n=1 Tax=Canis lupus familiaris
RepID=UPI00004BFC84
Length = 785
Score = 114 bits (285), Expect = 5e-24
Identities = 57/137 (41%), Positives = 88/137 (64%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S +++ +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 449 TKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 508
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL+I P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 509 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVP 568
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 569 SATEIIKASSKDAIRLL 585
[145][TOP]
>UniRef100_Q3JQZ9 ATP-dependent RNA helicase n=16 Tax=pseudomallei group
RepID=Q3JQZ9_BURP1
Length = 529
Score = 114 bits (285), Expect = 5e-24
Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 329 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 388
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 389 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 441
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGGD 535
R P ++ E + DR N RG R GG+ +GGRR GG GG R GG
Sbjct: 442 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG- 497
Query: 536 DWS 544
WS
Sbjct: 498 -WS 499
[146][TOP]
>UniRef100_B2SXM5 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia
phytofirmans PsJN RepID=B2SXM5_BURPP
Length = 542
Score = 114 bits (285), Expect = 5e-24
Identities = 77/195 (39%), Positives = 106/195 (54%), Gaps = 6/195 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 319 TATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 378
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 379 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 431
Query: 359 RPPPMEDLPE--LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG---GDDWSSGGRR 523
R P ++ E P + S GR RG GG + GGRR G G SGG R
Sbjct: 432 RTPLPVNVVEGFEPRKSAPSGNGRPGFGGRGRPGGG---NGGGRRFGSGSGKPAGSGGAR 488
Query: 524 PGGDDWSTEGRRSNG 568
G + S+ +S G
Sbjct: 489 SGSGNGSSWAGKSAG 503
[147][TOP]
>UniRef100_B9BY54 Dead/deah box helicase n=2 Tax=Burkholderia multivorans
RepID=B9BY54_9BURK
Length = 506
Score = 114 bits (285), Expect = 5e-24
Identities = 77/192 (40%), Positives = 103/192 (53%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 303 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 362
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S
Sbjct: 363 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIERFVRS----- 417
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
P P+ + R+ DR N RG GG +GGRR GG GG GG
Sbjct: 418 -PLPVNVIEGFEPRKTPPR--NDRGNGRGRPGGG----NGGRRFGG---KPGGGGHGGHG 467
Query: 539 WSTEGRRSNGYS 574
S G G+S
Sbjct: 468 RSYGGGNGGGWS 479
[148][TOP]
>UniRef100_A9GLZ1 DEAD/DEAH box helicase-like protein n=1 Tax=Phaeobacter
gallaeciensis BS107 RepID=A9GLZ1_9RHOB
Length = 458
Score = 114 bits (285), Expect = 5e-24
Identities = 68/184 (36%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +++ +L+++ ++ A+HG+ SQ QRER L F+ G +LVATDVA+RGLDIP
Sbjct: 269 RTKHGMEKLMKTLSAAGFSAAAIHGNKSQGQRERALASFKSGEVKILVATDVAARGLDIP 328
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ +
Sbjct: 329 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEMGELKAIQKTMNLNIPVAS 388
Query: 362 PPPMEDLPELPTRQVVSTLGR-----DRSNQRGYRTGGDDWSSGGRRSGGDDWSSGG--R 520
P E LP+ G+ R R+GG GG RSGG GG
Sbjct: 389 GRPWEVLPDAKAPAGRRGGGKPGGGGKPGGHRRRRSGGGGGGQGGARSGGQGAGQGGGQG 448
Query: 521 RPGG 532
+PGG
Sbjct: 449 KPGG 452
[149][TOP]
>UniRef100_C4KPB8 Dead/deah box helicase n=7 Tax=Burkholderia pseudomallei
RepID=C4KPB8_BURPS
Length = 513
Score = 114 bits (285), Expect = 5e-24
Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 313 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 372
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 373 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 425
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGGD 535
R P ++ E + DR N RG R GG+ +GGRR GG GG R GG
Sbjct: 426 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG- 481
Query: 536 DWS 544
WS
Sbjct: 482 -WS 483
[150][TOP]
>UniRef100_A4LCY1 DEAD/DEAH box helicase n=2 Tax=Burkholderia pseudomallei
RepID=A4LCY1_BURPS
Length = 513
Score = 114 bits (285), Expect = 5e-24
Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 313 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 372
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 373 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 425
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGGD 535
R P ++ E + DR N RG R GG+ +GGRR GG GG R GG
Sbjct: 426 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG- 481
Query: 536 DWS 544
WS
Sbjct: 482 -WS 483
[151][TOP]
>UniRef100_Q01AV7 Putative RNA helicase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01AV7_OSTTA
Length = 693
Score = 114 bits (285), Expect = 5e-24
Identities = 63/122 (51%), Positives = 80/122 (65%), Gaps = 2/122 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
TKRD E+ +L I +KALHGD+SQ QRE L FR+ +F VLVATDVA+RGLDI
Sbjct: 343 TKRDCGELCDNLQKEIPKGAKALHGDVSQSQREVVLSLFREDKFQVLVATDVAARGLDIT 402
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
V+L+I E P ET++HRSGRTGRAG G +V + T + V ++ER G +F I
Sbjct: 403 GVELVIQCEPPKDAETYIHRSGRTGRAGATGISVTLCTPRNEWAVPNIERKGGFKFIRIG 462
Query: 362 PP 367
PP
Sbjct: 463 PP 464
[152][TOP]
>UniRef100_A7QGV9 Chromosome chr16 scaffold_94, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QGV9_VITVI
Length = 600
Score = 114 bits (285), Expect = 5e-24
Identities = 63/139 (45%), Positives = 86/139 (61%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK A E++ L + +ALHGDI Q QRE TL GFR G+F LVAT+VA+RGLDI
Sbjct: 269 TETKDSASELAGLLPGA---RALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDIN 325
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V LII E P E ++HRSGRTGRAG G AV++F ++ + +ER+ G +FE +
Sbjct: 326 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLFD-PRRSNISKIERESGVKFEHVS 384
Query: 362 PPPMEDLPELPTRQVVSTL 418
P D+ + + T+
Sbjct: 385 APQPADIAKSAGVEAAGTI 403
[153][TOP]
>UniRef100_Q57Z07 Nucleolar RNA helicase II, putative n=2 Tax=Trypanosoma brucei
RepID=Q57Z07_9TRYP
Length = 632
Score = 114 bits (285), Expect = 5e-24
Identities = 57/141 (40%), Positives = 86/141 (60%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P
Sbjct: 306 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 364
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL+I P + F+HR+GRTGRAG++G V++ + V +ER +FE +
Sbjct: 365 MVDLVIQCAPPTDIDAFIHRAGRTGRAGRKGVCVLLHQPKDEYVVERIERHAKIKFEVLP 424
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
P E++ + R + R
Sbjct: 425 APTREEILKAVARDAAEDMAR 445
[154][TOP]
>UniRef100_C0KIF3 Vasa n=1 Tax=Lytechinus variegatus RepID=C0KIF3_LYTVA
Length = 679
Score = 114 bits (285), Expect = 5e-24
Identities = 71/190 (37%), Positives = 98/190 (51%), Gaps = 3/190 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR+AD ++ L+ S + ++HGD Q +RE L F+ GR VLVAT VA+RGLDIP
Sbjct: 491 TKRNADFLATLLSQSDFHATSIHGDRQQQEREEALRDFKIGRAPVLVATSVAARGLDIPK 550
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR- 361
V +++Y+LP + +VHR GRTGR G G + + A ++DVG I+
Sbjct: 551 VKHVVNYDLPSDIDEYVHRIGRTGRVGNTGRSTSFYDA---------DKDVGIARALIKI 601
Query: 362 -PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
+D+P+ S +G N G G D GGR GG SS G GGD+
Sbjct: 602 LADACQDVPQFLEEAGDSAIGTYHGNAGGSFGGRDTRKFGGRGGGGGGGSSFGGNSGGDE 661
Query: 539 WSTEGRRSNG 568
W + G G
Sbjct: 662 WGSGGGGDGG 671
[155][TOP]
>UniRef100_UPI0001BBA5B7 II DNA/RNA helicase n=1 Tax=Acinetobacter lwoffii SH145
RepID=UPI0001BBA5B7
Length = 624
Score = 114 bits (284), Expect = 7e-24
Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 1/178 (0%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
T+ D D ++ L + ++ ALHG + Q R R L R+GR +LVATDVA+RGLD+P
Sbjct: 263 TQEDTDMLAEELAEAGLSVVALHGAMPQTVRNRRLRSIREGRAKILVATDVAARGLDVPT 322
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
+ +I++ LP E +VHR GRTGRAG+ G A+ + T ++ + +LE + +R
Sbjct: 323 ISHVINFGLPMKNEDYVHRIGRTGRAGRTGKAITLATYRERGKIRALEDFLDARLNVSEI 382
Query: 365 PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
+E P P R GR R G R GG GGRR G+ S+ RR GGDD
Sbjct: 383 EGLEPSPP-PARGSRDGAGRGRGRDGGRRDGGRGGFGGGRRFEGE--SNFKRREGGDD 437
[156][TOP]
>UniRef100_Q8K2L4 Ddx21 protein (Fragment) n=2 Tax=Mus musculus RepID=Q8K2L4_MOUSE
Length = 689
Score = 114 bits (284), Expect = 7e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 357 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 416
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 417 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 476
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 477 SATEIIKASSKDAIRLL 493
[157][TOP]
>UniRef100_Q6PCP0 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Mus musculus
RepID=Q6PCP0_MOUSE
Length = 851
Score = 114 bits (284), Expect = 7e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 639 SATEIIKASSKDAIRLL 655
[158][TOP]
>UniRef100_Q3ULC7 Putative uncharacterized protein n=1 Tax=Mus musculus
RepID=Q3ULC7_MOUSE
Length = 851
Score = 114 bits (284), Expect = 7e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 639 SATEIIKASSKDAIRLL 655
[159][TOP]
>UniRef100_Q3TVJ3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Mus musculus
RepID=Q3TVJ3_MOUSE
Length = 851
Score = 114 bits (284), Expect = 7e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 639 SATEIIKASSKDAIRLL 655
[160][TOP]
>UniRef100_B1YSJ4 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia
ambifaria MC40-6 RepID=B1YSJ4_BURA4
Length = 512
Score = 114 bits (284), Expect = 7e-24
Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 309 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 368
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS----- 343
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S
Sbjct: 369 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIERFVRSPLPVN 428
Query: 344 ---RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514
FE + PP R GR + G GG S GG GG G
Sbjct: 429 VIEGFEPRKAPPRNGSTGGRGRPGGGNGGRRFGGKPGGGHGGAGRSYGGGNGGGWSGKPG 488
Query: 515 GRRPGGDDWSTEGRRSNG 568
G R GG +G+RS+G
Sbjct: 489 GSRDGGP--RRDGQRSSG 504
[161][TOP]
>UniRef100_A3NAX9 DEAD/DEAH box helicase n=1 Tax=Burkholderia pseudomallei 668
RepID=A3NAX9_BURP6
Length = 514
Score = 114 bits (284), Expect = 7e-24
Identities = 77/184 (41%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 315 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 374
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 375 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 427
Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGG 532
R P P+ + R+ DR N RG R GG+ +GGRR GG GG R GG
Sbjct: 428 RAPLPVNVVEGFEPRKAPPR--NDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG 482
Query: 533 DDWS 544
WS
Sbjct: 483 --WS 484
[162][TOP]
>UniRef100_Q090J1 ATP-dependent RNA helicase DeaD n=1 Tax=Stigmatella aurantiaca
DW4/3-1 RepID=Q090J1_STIAU
Length = 496
Score = 114 bits (284), Expect = 7e-24
Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK A+ ++ L SS I+++A+HG+ SQ RER L F+ G VLVATD+A+RG+DI
Sbjct: 253 TRTKHGANRVAKHLASSRISAEAIHGNKSQNARERALGAFKDGSCRVLVATDIAARGIDI 312
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +I+++LP+ PE++VHR GRTGRAG G A+ ++ + +ER + + +
Sbjct: 313 EGITHVINFDLPNIPESYVHRIGRTGRAGAVGTALSFCDGEERAYLRDIERTIRRQVPVM 372
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG------GR 520
P P R R + G R +SGG+RS G+ G G
Sbjct: 373 ADHPFRSGQSAPVPSEPGE-ARPRPSNEGRR-----HNSGGQRSQGESQGEGRHRRRRGG 426
Query: 521 RPGGDD---WSTEGRRSNG 568
RPGG S+EG R +G
Sbjct: 427 RPGGQGASARSSEGHRGSG 445
[163][TOP]
>UniRef100_C8NVE0 ATP-dependent RNA helicase DeaD (Fragment) n=1 Tax=Corynebacterium
genitalium ATCC 33030 RepID=C8NVE0_9CORY
Length = 639
Score = 114 bits (284), Expect = 7e-24
Identities = 53/127 (41%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK++ +EI+ L + ++ A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+
Sbjct: 317 RTKQETEEIAEKLRARGFSAAAINGDIAQQQRERTVDMLRDGRLDILVATDVAARGLDVE 376
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ +++Y++P+ E++VHR GRTGRAG+ G A++ T ++R + S+E+ G++ E +
Sbjct: 377 RISHVLNYDIPNDTESYVHRIGRTGRAGRTGEALLFVTPRERRMLRSIEKVTGAKIEEMD 436
Query: 362 PPPMEDL 382
P ++++
Sbjct: 437 LPTVDEV 443
[164][TOP]
>UniRef100_C6R8G6 Cold-shock DEAD box protein A n=1 Tax=Corynebacterium
tuberculostearicum SK141 RepID=C6R8G6_9CORY
Length = 619
Score = 114 bits (284), Expect = 7e-24
Identities = 53/147 (36%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK + +E++ +L ++ A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+
Sbjct: 302 RTKHETEEVAETLRDRGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 361
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ ++++++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E +
Sbjct: 362 RITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEMD 421
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442
P ++++ E + ++ N++
Sbjct: 422 LPSVDEVNEKRKEKFAQSITNSMDNKQ 448
[165][TOP]
>UniRef100_C6R3C4 Cold-shock DEAD box protein A n=1 Tax=Rothia mucilaginosa ATCC
25296 RepID=C6R3C4_9MICC
Length = 744
Score = 114 bits (284), Expect = 7e-24
Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK++ +E++ L + A+ A++GDI Q RERT+D R GR +LVATDVA+RGLD+
Sbjct: 319 RTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVDALRDGRIDILVATDVAARGLDVE 378
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ L+++Y++P E++VHR GRTGRAG+EGAA++ T +K + +E+ + E +
Sbjct: 379 RISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFVTPREKYMLRQIEKATRQKVEPMH 438
Query: 362 PPPMEDLPE 388
P E + E
Sbjct: 439 MPTAEAVNE 447
[166][TOP]
>UniRef100_C8WF18 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis
RepID=C8WF18_ZYMMO
Length = 458
Score = 114 bits (284), Expect = 7e-24
Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 12/187 (6%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L ++ + + A+HG+ SQ QRER L+ FR GR +LVATD+A+RG+D+
Sbjct: 257 TRTKHGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKILVATDIAARGIDV 316
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P V + +YELP+ E +VHR GRT RAG++G A+ ++ + S+ER + + +
Sbjct: 317 PGVSHVFNYELPNVAEQYVHRIGRTARAGRDGQAISFIANDERSYLRSIERLTRVKLQIL 376
Query: 359 RPPP---MEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG-------GDD-W 505
P ME EL RD + RG R GG GG + G GDD
Sbjct: 377 PLPENFVME--KELLPHPAPMRPERDGRDGRGGRGGGRGRFGGGAKPGFNHSHGKGDDRG 434
Query: 506 SSGGRRP 526
GG RP
Sbjct: 435 DRGGERP 441
[167][TOP]
>UniRef100_C2BQP3 DEAD-box helicase n=1 Tax=Corynebacterium pseudogenitalium ATCC
33035 RepID=C2BQP3_9CORY
Length = 619
Score = 114 bits (284), Expect = 7e-24
Identities = 53/147 (36%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK + +E++ +L ++ A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+
Sbjct: 302 RTKHETEEVAETLRDRGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 361
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ ++++++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E +
Sbjct: 362 RITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEMD 421
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442
P ++++ E + ++ N++
Sbjct: 422 LPSVDEVNEKRKEKFAQSITNSMDNKQ 448
[168][TOP]
>UniRef100_A4I7K4 ATP-dependent RNA helicase, putative n=1 Tax=Leishmania infantum
RepID=A4I7K4_LEIIN
Length = 614
Score = 114 bits (284), Expect = 7e-24
Identities = 77/191 (40%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Frame = +2
Query: 11 KRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
KRDAD + Y S I ++HGD Q +RE LD F+ G VLVATDVASRGLDIPNV
Sbjct: 397 KRDADYLERYLRQSRIPCSSIHGDRVQREREEALDIFKSGVCRVLVATDVASRGLDIPNV 456
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
+++ Y+LP + +VHR GRTGRAGK G A+ F + V L +R
Sbjct: 457 AVVVQYDLPSNIDDYVHRIGRTGRAGKRGTAISFFNDKNRNIVDDL-------IPLLRET 509
Query: 368 PMEDLPE---LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
LPE L + V R R + G+R+GG GG GG G R GG
Sbjct: 510 NQTVLPEVQALAKKPNVQNQPRGR-GRGGFRSGGFGGGFGGGYGGGYGGRGGYRGGGGFG 568
Query: 539 WSTEGRRSNGY 571
G GY
Sbjct: 569 GGYGGGYGGGY 579
[169][TOP]
>UniRef100_Q3B8Q1 Nucleolar RNA helicase 2 n=1 Tax=Rattus norvegicus RepID=DDX21_RAT
Length = 782
Score = 114 bits (284), Expect = 7e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 443 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 502
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 503 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVP 562
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 563 SATEIIKASSKDAIRLL 579
[170][TOP]
>UniRef100_Q9JIK5 Nucleolar RNA helicase 2 n=1 Tax=Mus musculus RepID=DDX21_MOUSE
Length = 851
Score = 114 bits (284), Expect = 7e-24
Identities = 57/137 (41%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 639 SATEIIKASSKDAIRLL 655
[171][TOP]
>UniRef100_UPI000196952D hypothetical protein BACCELL_03748 n=1 Tax=Bacteroides
cellulosilyticus DSM 14838 RepID=UPI000196952D
Length = 478
Score = 113 bits (283), Expect = 9e-24
Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Frame = +2
Query: 2 TRTKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
+RTK AD I+ Y I +++HGD SQ R+R L F++GR V++ATD+A+RG+DI
Sbjct: 255 SRTKHGADNIARYLSRRGITCESIHGDKSQNSRQRALSNFKEGRSNVIIATDIAARGIDI 314
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+DL+++Y+LPD PET+VHR GRTGRAG EG A+ + + + +E+ G + E
Sbjct: 315 KGLDLVLNYDLPDVPETYVHRIGRTGRAGCEGRAIAFCSGEEVPMLREIEKLTGIKLEQR 374
Query: 359 RP--PPMEDLPELPTRQV 406
+ PP+E+ P V
Sbjct: 375 KHDLPPLEETKTAPVVNV 392
[172][TOP]
>UniRef100_Q82TR7 Putative ATP-dependent RNA helicase protein n=1 Tax=Nitrosomonas
europaea RepID=Q82TR7_NITEU
Length = 457
Score = 113 bits (283), Expect = 9e-24
Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKRDAD ++ +L+S + A+HGD++Q +R RTL G RQGR +LVATDVA+RG+DI
Sbjct: 252 TATKRDADSLADNLSSQGHKAAAMHGDMTQRERTRTLTGLRQGRLKILVATDVAARGIDI 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
++ +I+++LP E +VHR GRTGRAG G AV + + +ER G+RFEF
Sbjct: 312 ADITHVINFDLPKFAEDYVHRIGRTGRAGASGIAVSFASGKDVAHLKRIERFTGNRFEFH 371
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529
P +E P R GR ++ G R + RRS D+ ++ PG
Sbjct: 372 VIPGIE--PRTKPR-----FGRS-DDKPGRRPSSSAAAHKTRRSWSDNPNTRTASPG 420
[173][TOP]
>UniRef100_Q3SF48 DEAD/DEAH box helicase n=1 Tax=Thiobacillus denitrificans ATCC
25259 RepID=Q3SF48_THIDA
Length = 533
Score = 113 bits (283), Expect = 9e-24
Identities = 79/190 (41%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR +EIS L S AS ALHGD+ Q QR R L R+GR VLVATDVA+RG+D+ +
Sbjct: 254 TKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRVLVATDVAARGIDVAS 313
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
+ +I+++LP E +VHR GRTGRAG+ G AV + V ++ER G+R E
Sbjct: 314 ISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGGLVKNIERYTGNRIEVHTL 373
Query: 365 PPMEDLPELPT-RQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
P +E PT R G R G R G + S G R + S G RP GD
Sbjct: 374 PGLE-----PTQRPSTGRPGNGRPRGNGPRGGYEKRSFGDR----SEPRSYGDRPRGD-- 422
Query: 542 STEGRRSNGY 571
+ R GY
Sbjct: 423 -SRDNRDRGY 431
[174][TOP]
>UniRef100_Q24W49 Putative uncharacterized protein n=1 Tax=Desulfitobacterium
hafniense Y51 RepID=Q24W49_DESHY
Length = 537
Score = 113 bits (283), Expect = 9e-24
Identities = 62/153 (40%), Positives = 97/153 (63%), Gaps = 3/153 (1%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKR DE+ +L + + ALHGD+SQ QR+R + FR G+ +LVATDVA+RGLDI
Sbjct: 261 RTKRGVDELVAALEARGYFADALHGDLSQQQRDRVMKKFRDGKVELLVATDVAARGLDID 320
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NV +I++++P PE++VHR GRTGRAG++G A+ + ++ + R + +ER + +R
Sbjct: 321 NVTHVINFDIPQDPESYVHRIGRTGRAGRKGQAITLVSSREYRQLRLIERLIKTRIVRKE 380
Query: 362 PPPMEDLPELPTRQVVSTLGR--DRSNQRGYRT 454
P + D+ E + + L + RS+ YR+
Sbjct: 381 LPTLADVSERQAENLKNQLVKILQRSHLGTYRS 413
[175][TOP]
>UniRef100_Q0C354 ATP-dependent RNA helicase RhlE n=1 Tax=Hyphomonas neptunium ATCC
15444 RepID=Q0C354_HYPNA
Length = 464
Score = 113 bits (283), Expect = 9e-24
Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L + I S A+HG+ SQ QRE+ L+ F+ GR +LVATD+A+RG+ +
Sbjct: 257 TRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARGIHV 316
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +I+Y+LPD PE FVHR GRT RAG G A+ + ++ T+ ++E+ G +
Sbjct: 317 DALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKLTGLKL--- 373
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
P LP+ P R+ +G R+G G R GG S G + GG
Sbjct: 374 -APNGVSLPDEPLRK--------PGKPQGNRSGNGGGRGGARSGGGYQGQSSGSQSGG 422
[176][TOP]
>UniRef100_B1ZB68 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium
populi BJ001 RepID=B1ZB68_METPB
Length = 506
Score = 113 bits (283), Expect = 9e-24
Identities = 71/198 (35%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L + I A+HG+ SQ QRER L FR G VLVATD+A+RG+D+
Sbjct: 252 TRTKHGADRVVRGLDKAGIVGAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF--- 349
V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ ++ +ER +
Sbjct: 312 EGVTHVVNYDLPNVPESYVHRIGRTARAGAEGMAISFCNDEERAYLLDIERTTRQKVPVA 371
Query: 350 ---EFIRPPPMEDLPELPTRQV--VSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514
E PP ++ E + + R QR R GG G R
Sbjct: 372 GFPEGFVPPSRQEAQETAAEEARRPPRQPQGRPGQRQGRPGGGRGQGGEGRGEPRTHEGR 431
Query: 515 GRRPGGDDWSTEGRRSNG 568
G RPGG + +RS G
Sbjct: 432 GGRPGGQPGHRQDQRSAG 449
[177][TOP]
>UniRef100_A6SX95 ATP-dependent RNA helicase n=1 Tax=Janthinobacterium sp. Marseille
RepID=A6SX95_JANMA
Length = 466
Score = 113 bits (283), Expect = 9e-24
Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKRDAD I+ L + A+ ALHGD+ Q R RTLDG R+G+ VLVATDVA+RG+D+
Sbjct: 275 TATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGLRRGQIRVLVATDVAARGIDV 334
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER 331
P + +++Y+LP PE +VHR GRTGRAG+ G AV + ++ V +ER
Sbjct: 335 PGITHVVNYDLPKFPEDYVHRIGRTGRAGRNGIAVSLVNHAESMNVKRIER 385
[178][TOP]
>UniRef100_A4G7H2 Putative ATP-dependent RNA helicase n=1 Tax=Herminiimonas
arsenicoxydans RepID=A4G7H2_HERAR
Length = 468
Score = 113 bits (283), Expect = 9e-24
Identities = 75/191 (39%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKRDAD I+ L + A+ ALHGD+ Q R RTLDG R+G+ VLVATDVA+RG+D+
Sbjct: 277 TATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGLRRGQIRVLVATDVAARGIDV 336
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVG-----S 343
P + + +Y+LP PE +VHR GRTGRAG+ G AV + ++ V +ER + S
Sbjct: 337 PAITHVFNYDLPKFPEDYVHRIGRTGRAGRNGIAVSLVNHAEGMNVKRIERFIKQLIPVS 396
Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSN-----QRGYRTGGDDWSSGGRRSGGDDWS 508
E P P + G +R N QR + + GG G
Sbjct: 397 VIEGFEPKRTASAPRSNHKPGGWKPGDNRGNAAKPGQRTFSKPNATRNEGGYNKGPRTSD 456
Query: 509 SGG--RRPGGD 535
+GG RRP G+
Sbjct: 457 AGGATRRPFGE 467
[179][TOP]
>UniRef100_C6MQU4 DEAD/DEAH box helicase domain protein n=1 Tax=Geobacter sp. M18
RepID=C6MQU4_9DELT
Length = 467
Score = 113 bits (283), Expect = 9e-24
Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 32/221 (14%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T+TK A + L S + +L G++SQ +R+ LDGFR G + ++VATD+A+RG+D+
Sbjct: 246 TKTKHRAKRVGEQLEKSGYKATSLQGNLSQNRRQAALDGFRDGTYQIMVATDIAARGIDV 305
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSR---- 346
+ +I+Y++PD PE + HR GRTGRA K G A M T + V S+ER +G++
Sbjct: 306 SLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTGEDEAMVRSIERVLGAKIERR 365
Query: 347 ----FEFIRPPPMED-----LPELPTRQ------------VVSTLGR-----DRSNQRGY 448
F++ P P +D P P R+ GR +R+N
Sbjct: 366 RLEGFDYAVPAPQKDAEFARAPREPQRRKPAAGKPAEAKAAKPAAGRPAQPGNRNNSGAA 425
Query: 449 RTGGDDWSSG-GRRSGGDDWSSGGRRPGGDDWSTEGRRSNG 568
R G G G GG+RPGG+ S+ R +G
Sbjct: 426 RHAGPGGKGAPGGHQAGHGAGEGGQRPGGNRPSSHAARRSG 466
[180][TOP]
>UniRef100_C2CL09 Superfamily II helicase n=1 Tax=Corynebacterium striatum ATCC 6940
RepID=C2CL09_CORST
Length = 678
Score = 113 bits (283), Expect = 9e-24
Identities = 55/147 (37%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK + +E++ SL + + A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+
Sbjct: 301 RTKHETEEVADSLRDAGYNAAAINGDIAQQQRERTVDQLKDGRLDILVATDVAARGLDVD 360
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ +++Y++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E +
Sbjct: 361 RITHVVNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNARLEEMD 420
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442
P + + E + ++ +G +++
Sbjct: 421 LPSADAVNEKRKEKFLAKIGESLGDKQ 447
[181][TOP]
>UniRef100_C0WFL7 DEAD-box helicase n=1 Tax=Corynebacterium accolens ATCC 49725
RepID=C0WFL7_9CORY
Length = 623
Score = 113 bits (283), Expect = 9e-24
Identities = 53/147 (36%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK + +E++ +L ++ A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+
Sbjct: 302 RTKHETEEVAEALRDRGYSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 361
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ ++++++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E +
Sbjct: 362 RITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEMD 421
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442
P ++++ E + + + N++
Sbjct: 422 LPSVDEVNEKRKEKFAQAITQSMDNKQ 448
[182][TOP]
>UniRef100_A9EMW5 DEAD/DEAH box helicase-like protein n=1 Tax=Phaeobacter
gallaeciensis 2.10 RepID=A9EMW5_9RHOB
Length = 458
Score = 113 bits (283), Expect = 9e-24
Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 1/177 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +++ +L+++ ++ A+HG+ SQ QRER L F+ G +LVATDVA+RGLDIP
Sbjct: 269 RTKHGMEKLMKTLSAAGFSAAAIHGNKSQGQRERALASFKSGEVKILVATDVAARGLDIP 328
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ +
Sbjct: 329 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEMGELKAIQKTMNLNIPVAS 388
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
P E LP+ + GR + G GG RRSGG GG R GG
Sbjct: 389 GRPWEVLPD-----AKAPAGRRGGGKPG--GGGKPGGHRRRRSGGGGGGQGGARSGG 438
[183][TOP]
>UniRef100_A9E5K2 Putative ATP-dependent RNA helicase, putative n=1 Tax=Oceanibulbus
indolifex HEL-45 RepID=A9E5K2_9RHOB
Length = 438
Score = 113 bits (283), Expect = 9e-24
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 1/189 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK ++++ +L + + ++HG+ SQ QR+R + GF+ G TVLVATDVA+RGLDIP
Sbjct: 253 RTKHGSEKLMKTLVKAGFDAASIHGNKSQGQRDRAIAGFKGGDITVLVATDVAARGLDIP 312
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + ++ELP+ P+ +VHR GRT RAGK+GAAV + + ++++ +G
Sbjct: 313 DVKHVYNFELPNVPDNYVHRIGRTARAGKDGAAVAFCAPDEMGELKAIQKTMGISIPVAS 372
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541
P E + E P++ + R RG R GG GGR GG GG G
Sbjct: 373 GRPWEVIDE-PSKP------KGRGRGRGGRPGG----GGGRPGGGG--GGGGEAAGKPSG 419
Query: 542 STEGRRSNG 568
RRS G
Sbjct: 420 GRRRRRSGG 428
[184][TOP]
>UniRef100_B9ICY7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ICY7_POPTR
Length = 657
Score = 113 bits (283), Expect = 9e-24
Identities = 61/139 (43%), Positives = 88/139 (63%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T + A+E+S L + +ALHG+I Q QRE TL GFR G+F LVAT+VA+RGLDI
Sbjct: 340 TEKRESANELSGLLPGA---RALHGEIQQSQREVTLSGFRSGKFLTLVATNVAARGLDIN 396
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V LII E P+ E ++HRSGRTGRAG G AV+++ ++ + ++R+ G +FE I
Sbjct: 397 DVQLIIQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYD-PRRSNISKIQRESGVKFEHIT 455
Query: 362 PPPMEDLPELPTRQVVSTL 418
P ED+ + + T+
Sbjct: 456 APKAEDIAKAVGVEAAETI 474
[185][TOP]
>UniRef100_A4FV23 DDX21 protein n=1 Tax=Bos taurus RepID=A4FV23_BOVIN
Length = 784
Score = 113 bits (283), Expect = 9e-24
Identities = 56/137 (40%), Positives = 87/137 (63%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A E+S ++ +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 448 TKKEAQELSQNVAVRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 507
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P
Sbjct: 508 DLVVQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVP 567
Query: 368 PMEDLPELPTRQVVSTL 418
++ + ++ + L
Sbjct: 568 SPTEIIKASSKDAIRLL 584
[186][TOP]
>UniRef100_A9A6H8 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus
maripaludis C6 RepID=A9A6H8_METM6
Length = 546
Score = 113 bits (283), Expect = 9e-24
Identities = 58/137 (42%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
+TK D DEIS LT A++ LHGD++Q QRE+TL+ F+ + VLVATDVA+RG+DI
Sbjct: 249 KTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLEKFKARKINVLVATDVAARGIDIN 308
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
++ +++Y++P PE++VHR GRTGRAGK+G AV S+ R +++ +
Sbjct: 309 DLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYIQKIANTEIRKEE 368
Query: 362 PPPMEDLPELPTRQVVS 412
P ++D+ R++VS
Sbjct: 369 VPDVKDIIGAKKRKIVS 385
[187][TOP]
>UniRef100_Q39R66 DEAD/DEAH box helicase-like n=1 Tax=Geobacter metallireducens GS-15
RepID=Q39R66_GEOMG
Length = 452
Score = 113 bits (282), Expect = 1e-23
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKRDA+ ++ L S ++ ALHGD+ Q R RT+ +QGR +LVATDVA+RGLD+
Sbjct: 253 TKRDAENMAIELRSQGHSAAALHGDMPQSARNRTIAAMKQGRIRLLVATDVAARGLDVSG 312
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
+ +I+++LP E +VHR GRTGRAG G A+ + ++ + +ER +G
Sbjct: 313 ISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVSYLARIERYIGQTL----- 367
Query: 365 PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDWS 544
P +P L R+ + + R ++ G TGG S G R D + G RPG S
Sbjct: 368 -PEHQIPGLEPRRPLHRVSTGRGSRPGNSTGGPRKSYGNR-----DAAKTGGRPGNAKRS 421
Query: 545 TEGRR--SNG 568
G+ SNG
Sbjct: 422 PWGKHTTSNG 431
[188][TOP]
>UniRef100_C5B2X3 RNA helicase n=1 Tax=Methylobacterium extorquens AM1
RepID=C5B2X3_METEA
Length = 519
Score = 113 bits (282), Expect = 1e-23
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 13/188 (6%)
Frame = +2
Query: 11 KRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
KRD ++ SLTS + ALHGD+ Q R LDGFR G +LVA+DVA+RGLDIP V
Sbjct: 255 KRDVAQLQRSLTSHGFNAAALHGDMDQRARMAALDGFRSGEVPLLVASDVAARGLDIPAV 314
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
+ ++++P PE +VHR GRTGRAG+ G A + + S +R++ ++E +G ++
Sbjct: 315 SHVFNFDVPHHPEDYVHRIGRTGRAGRSGQAFTLASRSDERSLSAIESLIGQPIAWLD-- 372
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRS-----------GGDDWSS 511
DL + R R ++R T GG++ SGGR + ++ S
Sbjct: 373 --GDLASVSDEVEGDEPRRRRGSRRAKETKGGEETKSGGRSTERSAAPASESPRSENRSR 430
Query: 512 GGRRPGGD 535
GGRRP +
Sbjct: 431 GGRRPAAE 438
[189][TOP]
>UniRef100_C4LJP9 ATP-dependent RNA helicase n=1 Tax=Corynebacterium kroppenstedtii
DSM 44385 RepID=C4LJP9_CORK4
Length = 823
Score = 113 bits (282), Expect = 1e-23
Identities = 53/129 (41%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK++ +E++ L + ++ A++GD++Q QRERT+D R GR +LVATDVA+RGLD+
Sbjct: 401 RTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGLDVE 460
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ +++Y++P E++VHR GRTGRAG+ G A++ T ++R + S+ER S E ++
Sbjct: 461 RISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSIEEMQ 520
Query: 362 PPPMEDLPE 388
P ++++ E
Sbjct: 521 LPTVDEVNE 529
[190][TOP]
>UniRef100_B8G080 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfitobacterium
hafniense DCB-2 RepID=B8G080_DESHD
Length = 530
Score = 113 bits (282), Expect = 1e-23
Identities = 62/153 (40%), Positives = 97/153 (63%), Gaps = 3/153 (1%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKR DE+ +L + + ALHGD+SQ QR+R + FR G+ +LVATDVA+RGLDI
Sbjct: 254 RTKRGVDELVAALEARGYFADALHGDLSQQQRDRVMKKFRDGKVELLVATDVAARGLDID 313
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NV +I++++P PE++VHR GRTGRAG++G A+ + ++ + R + +ER + +R
Sbjct: 314 NVTHVINFDIPQDPESYVHRIGRTGRAGRKGQAITLVSSREYRQLRLIERLIKTRIIRKE 373
Query: 362 PPPMEDLPELPTRQVVSTLGR--DRSNQRGYRT 454
P + D+ E + + L + RS+ YR+
Sbjct: 374 LPTLADVSERQAENLKNQLVKILQRSHLGTYRS 406
[191][TOP]
>UniRef100_B7KPP7 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium
chloromethanicum CM4 RepID=B7KPP7_METC4
Length = 510
Score = 113 bits (282), Expect = 1e-23
Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L +S+ S A+HG+ SQ QRER L FR G VLVATD+A+RG+D+
Sbjct: 252 TRTKHGADRVVRGLDKASVVSAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER------DVG 340
V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ + +ER VG
Sbjct: 312 DGVTHVVNYDLPNVPESYVHRIGRTARAGAEGQAISFCNDEERAYLRDIERTTRQKIPVG 371
Query: 341 SRFEFIRPPPMEDLPE-------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD 499
E PP ++ + P RQ + R QR R GG G R
Sbjct: 372 GFPEGFVPPSRQEAQDNAAEEARRPPRQ-----PQGRPGQRQGRPGGGRGQGGEGRGEPR 426
Query: 500 DWSSGGRRPGGDDWSTEGRRSNG 568
+ G RPGG + +R+ G
Sbjct: 427 AHEARGGRPGGQPGHRQDQRAAG 449
[192][TOP]
>UniRef100_A9W8K6 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium
extorquens PA1 RepID=A9W8K6_METEP
Length = 519
Score = 113 bits (282), Expect = 1e-23
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 13/188 (6%)
Frame = +2
Query: 11 KRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
KRD ++ SLTS + ALHGD+ Q R LDGFR G +LVA+DVA+RGLDIP V
Sbjct: 255 KRDVAQLQRSLTSHGFNAAALHGDMDQRARMAALDGFRSGEVPLLVASDVAARGLDIPAV 314
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
+ ++++P PE +VHR GRTGRAG+ G A + + S +R++ ++E +G ++
Sbjct: 315 SHVFNFDVPHHPEDYVHRIGRTGRAGRSGQAFTLASRSDERSLSAIESLIGQPIAWLD-- 372
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRS-----------GGDDWSS 511
DL + R R ++R T GG++ SGGR + ++ S
Sbjct: 373 --GDLASVSDEVEGDEPRRRRGSRRAKETKGGEETKSGGRSTERSAAPASESPRSENRSR 430
Query: 512 GGRRPGGD 535
GGRRP +
Sbjct: 431 GGRRPAAE 438
[193][TOP]
>UniRef100_A9W5V9 DEAD/DEAH box helicase domain protein n=2 Tax=Methylobacterium
extorquens RepID=A9W5V9_METEP
Length = 510
Score = 113 bits (282), Expect = 1e-23
Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L +S+ S A+HG+ SQ QRER L FR G VLVATD+A+RG+D+
Sbjct: 252 TRTKHGADRVVRGLDKASVVSAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER------DVG 340
V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ + +ER VG
Sbjct: 312 DGVTHVVNYDLPNVPESYVHRIGRTARAGAEGQAISFCNDEERAYLRDIERTTRQKIPVG 371
Query: 341 SRFEFIRPPPMEDLPE-------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD 499
E PP ++ + P RQ + R QR R GG G R
Sbjct: 372 GFPEGFVPPTRQEAQDNAAEEARRPPRQ-----PQGRPGQRQGRPGGGRGQGGEGRGEPR 426
Query: 500 DWSSGGRRPGGDDWSTEGRRSNG 568
+ G RPGG + +R+ G
Sbjct: 427 AHEARGGRPGGQPGHRQDQRAAG 449
[194][TOP]
>UniRef100_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia heliotrinireducens
DSM 20476 RepID=C7N178_SLAHD
Length = 657
Score = 113 bits (282), Expect = 1e-23
Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T+TK AD + L I ++A+H D SQ QR+R L+ FR+G+ V+VATDV +RG+D+
Sbjct: 254 TKTKGGADNCTRRLCKIGIGAEAIHADRSQAQRQRALERFREGKTHVIVATDVLARGIDV 313
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P VD +++Y+LP PE +VHR GRTGRAG G AV T K + S+++ +G + +
Sbjct: 314 PEVDYVVNYDLPMMPEDYVHRIGRTGRAGVAGYAVSFVTPDTKNLLRSIQKFIGEDIQVM 373
Query: 359 RPPPMEDLPE--------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG------- 493
ED E + + + +DR + G + G GG++ G
Sbjct: 374 EFKAGEDAYEPVGKDHALAASEEEHAPKRKDRDKKNGKKGGRKHDDRGGKKGGRKHDDRE 433
Query: 494 --GDDWSSGGRRP-GGDDWSTEGRRS 562
DD GG++ G++ + E +R+
Sbjct: 434 GARDDAPKGGKKKRKGNETNAEAKRA 459
[195][TOP]
>UniRef100_UPI00017B33D3 UPI00017B33D3 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B33D3
Length = 605
Score = 112 bits (281), Expect = 2e-23
Identities = 56/137 (40%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A+E++ + + +++LHGDI Q QRE TL GFR+G F VLVAT+VA+RGLDIP V
Sbjct: 293 TKKEANELALNASIKQNAQSLHGDIPQKQRETTLKGFRKGSFEVLVATNVAARGLDIPEV 352
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P
Sbjct: 353 DLVVQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYVENKAGITFRRVGVP 412
Query: 368 PMEDLPELPTRQVVSTL 418
D+ + ++ V L
Sbjct: 413 TANDIIKSSSKDAVRFL 429
[196][TOP]
>UniRef100_Q4S0Z1 Chromosome 5 SCAF14773, whole genome shotgun sequence. (Fragment)
n=1 Tax=Tetraodon nigroviridis RepID=Q4S0Z1_TETNG
Length = 727
Score = 112 bits (281), Expect = 2e-23
Identities = 56/137 (40%), Positives = 86/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A+E++ + + +++LHGDI Q QRE TL GFR+G F VLVAT+VA+RGLDIP V
Sbjct: 415 TKKEANELALNASIKQNAQSLHGDIPQKQRETTLKGFRKGSFEVLVATNVAARGLDIPEV 474
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P
Sbjct: 475 DLVVQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYVENKAGITFRRVGVP 534
Query: 368 PMEDLPELPTRQVVSTL 418
D+ + ++ V L
Sbjct: 535 TANDIIKSSSKDAVRFL 551
[197][TOP]
>UniRef100_Q5FUF7 ATP-dependent RNA helicase n=1 Tax=Gluconobacter oxydans
RepID=Q5FUF7_GLUOX
Length = 431
Score = 112 bits (281), Expect = 2e-23
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T K +A++++ L + I ++A+HG+ SQ RER + GFR G LVATD+A+RG+D+
Sbjct: 252 TLMKHEANKVAEFLNKNGIRAEAIHGNKSQGARERAMAGFRSGAIKALVATDIAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
V + +Y+LP+ PE++VHR GRT RAG+EG AV + A Q+ + +E+ +G +
Sbjct: 312 DEVSHVFNYDLPNVPESYVHRIGRTARAGREGCAVSLCDAEQRAWLKDIEKKIGKPIPVV 371
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
P + Q LG GG GGRR G SGG RPGG
Sbjct: 372 TDHPFHSEEARLSTQRPPVLG-----------GGRGGGGGGRRRSGP--PSGG-RPGGGR 417
Query: 539 WSTEGR 556
GR
Sbjct: 418 GGAPGR 423
[198][TOP]
>UniRef100_Q473Y5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=1
Tax=Ralstonia eutropha JMP134 RepID=Q473Y5_RALEJ
Length = 632
Score = 112 bits (281), Expect = 2e-23
Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 1/190 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKRDAD ++ L+ + A+ ALHGD++Q R RTL R+G VLVATDVA+RG+D+
Sbjct: 319 TATKRDADSLAERLSDTGFAAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAARGIDV 378
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P++ +++++LP E +VHR GRTGRAG+ G A+ + + +ER +R +
Sbjct: 379 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGVAINLVNHNDTFQWKRIERFTNNRIDAS 438
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
+E R R N GYR GG+ S G R+ GD G R G+
Sbjct: 439 VIEGLEPRRSPKPRSNFGGKPGGRGNGGGYR-GGE--RSFGDRNFGDRKFGGESRGFGNR 495
Query: 539 WSTEGRRSNG 568
+ EG RS G
Sbjct: 496 GNQEGGRSFG 505
[199][TOP]
>UniRef100_Q1GI56 DEAD/DEAH box helicase-like protein n=1 Tax=Ruegeria sp. TM1040
RepID=Q1GI56_SILST
Length = 445
Score = 112 bits (281), Expect = 2e-23
Identities = 69/177 (38%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +++ L + + A+HG+ SQ QRER L F+ G TVLVATDVA+RGLDIP
Sbjct: 253 RTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLVATDVAARGLDIP 312
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ +G
Sbjct: 313 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAIQKTMGITIPVAS 372
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
E+LP+ + R RG GG GGR GG G RR GG
Sbjct: 373 GRAWEELPDPAAKPA-------RGGGRGRPGGG----GGGRGKGGGKPGGGRRRFGG 418
[200][TOP]
>UniRef100_C6BF08 DEAD/DEAH box helicase domain protein n=1 Tax=Ralstonia pickettii
12D RepID=C6BF08_RALP1
Length = 627
Score = 112 bits (281), Expect = 2e-23
Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKRDAD ++ LT ++ ALHGD+ Q R RTL R+G+ VLVATDVA+RG+D+
Sbjct: 303 TATKRDADSLAERLTEHGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDV 362
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P++ +++++LP E +VHR GRTGRAG+ G A+ + + +ER V R +
Sbjct: 363 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHNDTFQWRRIERFVDRRIDAS 422
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
+E R G DR RG GG+ G+R G G GG+
Sbjct: 423 VVEGLEPKRSAKPRTGGPRAGGDRGGYRG--NGGNGGGYRGQREGYGARQGGN---GGNS 477
Query: 539 WSTEGRRSNGYS 574
+ EGR ++
Sbjct: 478 GNNEGRFQRSFA 489
[201][TOP]
>UniRef100_C1AE44 ATP-dependent DEAD-box RNA helicase DeaD n=1 Tax=Gemmatimonas
aurantiaca T-27 RepID=C1AE44_GEMAT
Length = 594
Score = 112 bits (281), Expect = 2e-23
Identities = 54/127 (42%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RT+ + DE+S +LT+ + ++ALHG +SQ QR+R + FR + +L+ATDVA+RGLD+
Sbjct: 267 RTRTEVDELSETLTARGLRAEALHGGLSQDQRDRVMQKFRARKVDLLIATDVAARGLDVK 326
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V ++++++P ET+VHR GRTGRAG+EG AV + R + ++ER G + E +
Sbjct: 327 HVSHVVNFDVPVDAETYVHRIGRTGRAGREGVAVTFAEPRENRLLRNIERQTGQKIEIAQ 386
Query: 362 PPPMEDL 382
P + DL
Sbjct: 387 VPTVADL 393
[202][TOP]
>UniRef100_B9M4E4 DEAD/DEAH box helicase domain protein n=1 Tax=Geobacter sp. FRC-32
RepID=B9M4E4_GEOSF
Length = 451
Score = 112 bits (281), Expect = 2e-23
Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Frame = +2
Query: 8 TKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKRDAD ++ L A+ ALHGD+SQ R +T+ R+G+ +LVATDVA+RGLD+
Sbjct: 253 TKRDADLLARDLHAQGHAAAALHGDMSQNARNKTIHNMRRGKIRLLVATDVAARGLDVTG 312
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
+ +I+++LP E +VHR GRTGRAG G A+ + + + +ER G
Sbjct: 313 ISHVINFDLPKFAEDYVHRIGRTGRAGATGIAISFASLNDLNYLDRIERYTGQTL----- 367
Query: 365 PPMEDLPEL-PTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGG 517
PM +P L PTR + + +Q G G ++ GRR G DD GG
Sbjct: 368 -PMHVIPGLEPTRPLRRLSTSGKRSQPGNGRGKTPYAGNGRRQGKDDTKGGG 418
[203][TOP]
>UniRef100_B7L2T5 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium
chloromethanicum CM4 RepID=B7L2T5_METC4
Length = 519
Score = 112 bits (281), Expect = 2e-23
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 13/188 (6%)
Frame = +2
Query: 11 KRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
KRD ++ SLTS + ALHGD+ Q R LDGFR G +LVA+DVA+RGLDIP V
Sbjct: 255 KRDVAQLQRSLTSHGFNAAALHGDMDQRARMAALDGFRSGEVPLLVASDVAARGLDIPAV 314
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
+ ++++P PE +VHR GRTGRAG+ G A + + S +R++ ++E +G ++
Sbjct: 315 SHVFNFDVPHHPEDYVHRIGRTGRAGRSGQAFTLASRSDERSLSAIESLIGQPIAWLD-- 372
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRS-----------GGDDWSS 511
DL + R R ++R T GG++ SGGR + ++ S
Sbjct: 373 --GDLASVSDEVEGDEPRRRRGSRRAKETKGGEEAKSGGRSTERSAAPSSESPRSENRSR 430
Query: 512 GGRRPGGD 535
GGRRP +
Sbjct: 431 GGRRPAAE 438
[204][TOP]
>UniRef100_B2U8M9 DEAD/DEAH box helicase domain protein n=1 Tax=Ralstonia pickettii
12J RepID=B2U8M9_RALPJ
Length = 627
Score = 112 bits (281), Expect = 2e-23
Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKRDAD ++ LT ++ ALHGD+ Q R RTL R+G+ VLVATDVA+RG+D+
Sbjct: 303 TATKRDADSLAERLTEHGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDV 362
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P++ +++++LP E +VHR GRTGRAG+ G A+ + + +ER V R +
Sbjct: 363 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHNDTFQWRRIERFVDRRIDAS 422
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538
+E R G DR RG GG+ G+R G G GG+
Sbjct: 423 VVEGLEPKRSAKPRTGGPRAGGDRGGYRG--NGGNGGGYRGQREGYGARQGGN---GGNS 477
Query: 539 WSTEGRRSNGYS 574
+ EGR ++
Sbjct: 478 GNNEGRFQRSFA 489
[205][TOP]
>UniRef100_A7MJ24 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
BAA-894 RepID=A7MJ24_ENTS8
Length = 474
Score = 112 bits (281), Expect = 2e-23
Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK A+ ++ L I + A+HG+ SQ R R L F+ G VLVATD+A+RGLDI
Sbjct: 252 TRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGGIRVLVATDIAARGLDI 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +++YELP+ PE +VHR GRTGRA G A+ + + + + +ER + +
Sbjct: 312 EELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIERLLKREIPRM 371
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR--RPGG 532
P E P +P +V+ GR RG + GG RR G+ S G RP G
Sbjct: 372 AIPGYEPDPSIPAEPIVN--GRQSRGGRGGQGGGGRGQGQPRRQNGEGNRSSGERSRPAG 429
Query: 533 DDWSTEGRRSNG 568
+ GRR +G
Sbjct: 430 E----RGRRQDG 437
[206][TOP]
>UniRef100_A6H0L1 Probable ATP-dependent RNA helicase, DEAD/DEAH box family n=1
Tax=Flavobacterium psychrophilum JIP02/86
RepID=A6H0L1_FLAPJ
Length = 644
Score = 112 bits (281), Expect = 2e-23
Identities = 56/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD ++ L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+
Sbjct: 250 RTKRDTQAVAEKLVEDGYSAAALHGDLSQAQRDGVMKAFRGRQIQMLVATDVAARGIDVD 309
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352
NV +++Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE
Sbjct: 310 NVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSEIRKISSIERIIKQKFE 366
[207][TOP]
>UniRef100_A5FH88 DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium
johnsoniae UW101 RepID=A5FH88_FLAJ1
Length = 634
Score = 112 bits (281), Expect = 2e-23
Identities = 56/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD ++ L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+
Sbjct: 250 RTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATDVAARGIDVD 309
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352
NV +++Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE
Sbjct: 310 NVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERIIKQKFE 366
[208][TOP]
>UniRef100_C2GIZ2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51866 RepID=C2GIZ2_9CORY
Length = 718
Score = 112 bits (281), Expect = 2e-23
Identities = 52/129 (40%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK + +E++ L + +++A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+
Sbjct: 357 RTKYETEELAEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVD 416
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ +++Y++P E+++HR GRTGRAG+ G A++ T ++R + S+ER + E ++
Sbjct: 417 RISHVLNYDIPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATLEEMQ 476
Query: 362 PPPMEDLPE 388
P ++++ E
Sbjct: 477 LPTVDEVNE 485
[209][TOP]
>UniRef100_C0VTD2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum
ATCC 51867 RepID=C0VTD2_9CORY
Length = 718
Score = 112 bits (281), Expect = 2e-23
Identities = 52/129 (40%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK + +E++ L + +++A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+
Sbjct: 357 RTKYETEELAEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVD 416
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ +++Y++P E+++HR GRTGRAG+ G A++ T ++R + S+ER + E ++
Sbjct: 417 RISHVLNYDIPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATLEEMQ 476
Query: 362 PPPMEDLPE 388
P ++++ E
Sbjct: 477 LPTVDEVNE 485
[210][TOP]
>UniRef100_A3XBG1 Putative ATP-dependent RNA helicase protein n=1 Tax=Roseobacter sp.
MED193 RepID=A3XBG1_9RHOB
Length = 431
Score = 112 bits (281), Expect = 2e-23
Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 1/177 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +++ L S A+ A+HG+ SQ QRER L F+ G+ VLVATDVA+RGLDIP
Sbjct: 247 RTKHGMEKLMKVLEKSGFAAAAIHGNKSQGQRERALAAFKSGQIKVLVATDVAARGLDIP 306
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +YELP+ P+ +VHR GRT RAGK+G AV + + + ++++ +
Sbjct: 307 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCSPDEMEELKAIQKVMKITIPTAS 366
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
P E +P R + G + GG+ GG R G + G +PGG
Sbjct: 367 GSPWEPVPGATP---------SRGGRPGGKPGGNRRRGGGGRGQGGGGARSGGKPGG 414
[211][TOP]
>UniRef100_A2TP65 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=1
Tax=Dokdonia donghaensis MED134 RepID=A2TP65_9FLAO
Length = 638
Score = 112 bits (281), Expect = 2e-23
Identities = 56/146 (38%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD +++ L + ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+
Sbjct: 249 RTKRDTQKVAEQLIEDGYNAGALHGDLSQNQRDLVMKSFRNNQIQMLVATDVAARGIDVD 308
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + LE+ + +F+
Sbjct: 309 DITHVINYQLPDEIETYTHRSGRTGRAGKTGTSMVIVTKSEMRKIKQLEKILAKKFDQKT 368
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQ 439
P +++ ++ + +++ NQ
Sbjct: 369 IPDGKEITQVQLFHLANSINNTEINQ 394
[212][TOP]
>UniRef100_C1N5K6 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N5K6_9CHLO
Length = 513
Score = 112 bits (281), Expect = 2e-23
Identities = 78/197 (39%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Frame = +2
Query: 8 TKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR AD++ L+ S ++HGD +Q +RE L FR GR +LVATDVA+RGLDIP+
Sbjct: 314 TKRGADQLEDWLSREGFPSTSIHGDRTQQEREYALKSFRSGRTPILVATDVAARGLDIPH 373
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFT---ASQKRTVISLERDVGSRFEF 355
V +I+++LP + +VHR GRTGRAGK+G A FT A R++I L + G
Sbjct: 374 VTHVINFDLPSDIDDYVHRIGRTGRAGKKGLATAFFTDKDAGLARSMIELMTEAGQEVPS 433
Query: 356 IRPPPMEDLPELPTRQVVSTLGRDRSNQR-GYRTGGDDWSS----GGRRSGGDDWSSGGR 520
L R G+ R R G GG D+ S GG GG DW S G
Sbjct: 434 F-------LNGFSGRGGFGGGGKRRGGGRGGGGFGGRDFRSHGGGGGGGGGGGDWPSRGG 486
Query: 521 RPGGDDWSTEGRRSNGY 571
GG G GY
Sbjct: 487 GGGGGGGGWGGGGGGGY 503
[213][TOP]
>UniRef100_B9S627 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus
communis RepID=B9S627_RICCO
Length = 781
Score = 112 bits (281), Expect = 2e-23
Identities = 68/187 (36%), Positives = 96/187 (51%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+ D+++ +LT + + A+HGD SQ +R+ L FR GR VLVATDVA+RGLDI ++
Sbjct: 417 TKKMCDQLARNLTRTFGAAAIHGDKSQSERDHVLSQFRTGRSPVLVATDVAARGLDIKDI 476
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
++I+Y+ P G E +VHR GRTGRAG G A F + L + + + + PP
Sbjct: 477 RVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKYASDLIKVLEGASQRV-PP 535
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDWST 547
+ D+ + G + + G GG D GGR G GGR G S
Sbjct: 536 EIRDMASRGS-------GMSKFRRWGSAPGGRDGGRGGRSDFGYSGRDGGRGSFGMSSSY 588
Query: 548 EGRRSNG 568
R G
Sbjct: 589 SSRPEKG 595
[214][TOP]
>UniRef100_Q9XTP2 P68 RNA helicase n=1 Tax=Molgula oculata RepID=Q9XTP2_MOLOC
Length = 618
Score = 112 bits (281), Expect = 2e-23
Identities = 71/180 (39%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKR DE++ ++ + +HGD SQ +R+ L+ FR GR +LVATDVASRGLD+
Sbjct: 401 TETKRRCDELTRTMRRDGWPAMCIHGDKSQPERDWVLNEFRSGRSPILVATDVASRGLDV 460
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+V +I+Y+ P E +VHR GRT RA ++G A FT + L + + +
Sbjct: 461 SDVKFVINYDFPSQCEDYVHRIGRTARAEQKGTAYTFFTYDNAKQAKDLIAILQEAKQAV 520
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGY--RTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
P ME + R + GRDR N GY R GG + GG R+G SGG +PGG
Sbjct: 521 NPKLME--LGMTFRNYGKSGGRDRRNGGGYGGRGGGGGYRGGGARNG-----SGGGKPGG 573
[215][TOP]
>UniRef100_A7T9S8 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis
RepID=A7T9S8_NEMVE
Length = 244
Score = 112 bits (281), Expect = 2e-23
Identities = 55/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD ++ L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+
Sbjct: 124 RTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATDVAARGIDVD 183
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352
++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE
Sbjct: 184 DITHVINYQLPDEVETYTHRSGRTGRAGKSGTSLVIITKSELRKISSIERIIKMKFE 240
[216][TOP]
>UniRef100_UPI0000ECB487 ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box protein 50)
(Nucleolar protein Gu2) (Gu-beta). n=2 Tax=Gallus gallus
RepID=UPI0000ECB487
Length = 693
Score = 112 bits (280), Expect = 2e-23
Identities = 56/137 (40%), Positives = 85/137 (62%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK+DA+E++ + + ++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V
Sbjct: 374 TKKDANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGAFKVLVATNVAARGLDIPEV 433
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F+ + P
Sbjct: 434 DLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEENQLRYVEVKAGITFKRVGVP 493
Query: 368 PMEDLPELPTRQVVSTL 418
D+ + ++ + L
Sbjct: 494 TATDIIKASSKDAIRCL 510
[217][TOP]
>UniRef100_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1
Tax=Carboxydothermus hydrogenoformans Z-2901
RepID=Q3AFI3_CARHZ
Length = 430
Score = 112 bits (280), Expect = 2e-23
Identities = 54/139 (38%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK+ DE+ L A+K LHGD+SQ +R +T+ F+ G+ +LVATDVA+RGLDIP
Sbjct: 247 RTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIP 306
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V +I++++P PE+++HR GRTGRAG+EG A+ + +++ + ++E + R +
Sbjct: 307 DVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLKREI 366
Query: 362 PPPMEDLPELPTRQVVSTL 418
P DL E +++ +
Sbjct: 367 LPEPVDLEEARFKKIAKKI 385
[218][TOP]
>UniRef100_B2V9H9 DEAD/DEAH box helicase domain protein n=1 Tax=Sulfurihydrogenibium
sp. YO3AOP1 RepID=B2V9H9_SULSY
Length = 405
Score = 112 bits (280), Expect = 2e-23
Identities = 60/148 (40%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T+TK +ADE++ L + A+HGD SQ +RE L FR G+ +LVATDVA+RGLDI
Sbjct: 253 TQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARGLDI 312
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
VDL+I+Y LP E+++HR GRTGRAG+EG A+ + T S+ + + ++++ + E I
Sbjct: 313 KGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTPSEDKQLQNIQKKTKANIEVI 372
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQR 442
+ L S+ +D+S+Q+
Sbjct: 373 NEAQEKKL---------SSAQKDKSSQK 391
[219][TOP]
>UniRef100_C5AES8 DEAD/DEAH box helicase-like protein n=1 Tax=Burkholderia glumae
BGR1 RepID=C5AES8_BURGB
Length = 524
Score = 112 bits (280), Expect = 2e-23
Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 310 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 369
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 370 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 422
Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD--------DWSS 511
R P P+ + R+ G R G GG + SG + GG + S
Sbjct: 423 RTPLPVNVIEGFEPRKAPPRGGPGRGRPGGGSGGGRRFGSGSSKPGGSREGGYGSGNRSY 482
Query: 512 GGRRPGGDDWSTE-----GRRSNGY 571
GG G+ W + G R GY
Sbjct: 483 GGGGSSGNGWGNKSANGGGNREGGY 507
[220][TOP]
>UniRef100_C4FJ61 ATP-dependent RNA helicase DbpA n=1 Tax=Sulfurihydrogenibium
yellowstonense SS-5 RepID=C4FJ61_9AQUI
Length = 405
Score = 112 bits (280), Expect = 2e-23
Identities = 60/152 (39%), Positives = 94/152 (61%), Gaps = 5/152 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T+TK +ADE++ L + A+HGD SQ +RE L FR G+ +LVATDVA+RGLDI
Sbjct: 253 TQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARGLDI 312
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
VDL+I+Y LP E+++HR GRTGRAG+EG A+ + T+S+ + + ++++ + E I
Sbjct: 313 KGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTSSEDKQLQNIQKKTKANIEVI 372
Query: 359 RPPPMEDL----PELPTRQVVSTLGRDRSNQR 442
+ + P+++ S+ + R QR
Sbjct: 373 NEAQEKKFSSAQKDKPSQKERSSRNQTRRKQR 404
[221][TOP]
>UniRef100_A8UPQ2 Putative RNA helicase dead-box protein n=1 Tax=Flavobacteriales
bacterium ALC-1 RepID=A8UPQ2_9FLAO
Length = 638
Score = 112 bits (280), Expect = 2e-23
Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD +++ +L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+
Sbjct: 250 RTKRDTQKVAENLIEDGYSAGALHGDLSQNQRDIVMKSFRNKQIQMLVATDVAARGIDVD 309
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ + S+ R + S+ER + +FE
Sbjct: 310 DITHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIVSKSETRKIKSIERIIKKQFEQKE 369
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSN 436
P ++ E+ + + + +N
Sbjct: 370 IPSGMEICEVQLMSLANKIHNTEAN 394
[222][TOP]
>UniRef100_A3I2Y4 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1
RepID=A3I2Y4_9SPHI
Length = 580
Score = 112 bits (280), Expect = 2e-23
Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 6/163 (3%)
Frame = +2
Query: 8 TKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR DE + +L S I ++ALHGD+SQ QR++ ++ FR+G TVLVATDVA+RG+D+ N
Sbjct: 253 TKRMTDEATEALGSRGILAEALHGDLSQAQRDKVMNKFRKGLCTVLVATDVAARGIDVDN 312
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQK-RTVISLERDVGSRFEFIR 361
V+ + +++LP E++VHR GRTGRAGK G A+ T + + LER + +
Sbjct: 313 VEAVFNFDLPLDDESYVHRIGRTGRAGKSGKAINFVTGRRDFGKIRDLERFTKASIAKMD 372
Query: 362 PPPMEDLPELPTRQVV----STLGRDRSNQRGYRTGGDDWSSG 478
PP + DL EL Q V + + ++ NQ T G + G
Sbjct: 373 PPSVSDLIELKKAQFVKDVHTVISKEEDNQIFEETVGQLLTEG 415
[223][TOP]
>UniRef100_A9SYT2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SYT2_PHYPA
Length = 684
Score = 112 bits (280), Expect = 2e-23
Identities = 69/187 (36%), Positives = 96/187 (51%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TKR D +S +L + A+HGD SQ +R+ L FR GR +LVATDVA+RGLDI ++
Sbjct: 404 TKRMCDTLSRNLGRDFGAAAIHGDKSQSERDFVLSQFRTGRTPILVATDVAARGLDIKDI 463
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
++++Y+ P G E +VHR GRTGRAG G A F+ + L + + + + PP
Sbjct: 464 RVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFSEQDGKYAKELIKVLEGANQKV-PP 522
Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDWST 547
++D + S G + G R GGD GGR G + G GG S
Sbjct: 523 ELKD--------IASRGGGMFKGRMGNRWGGDSGGRGGRDGGRSSYRGGRGDFGGRGSSY 574
Query: 548 EGRRSNG 568
G R G
Sbjct: 575 GGGRDGG 581
[224][TOP]
>UniRef100_Q2NB74 DNA and RNA helicase n=1 Tax=Erythrobacter litoralis HTCC2594
RepID=Q2NB74_ERYLH
Length = 492
Score = 112 bits (279), Expect = 3e-23
Identities = 68/179 (37%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L + I S A+HG+ SQ QR+R LD F++ + +L+ATDVA+RG+DI
Sbjct: 259 TRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALDEFKRAKTPILIATDVAARGIDI 318
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P V +I+YELP+ PE +VHR GRT RAGK+G A+ ++ + ++++ + EF
Sbjct: 319 PGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAYLKDIQKNTDA--EFD 376
Query: 359 RPPPMEDLPEL-----PTRQVVSTLG-RDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGG 517
R P E+ + PT++ G R + + + GG + S + GG+ S+GG
Sbjct: 377 RLPLPENFRAVVEGVGPTKREQKQRGPRIKPKPKARKQGGTNRS---KPQGGNPQSAGG 432
[225][TOP]
>UniRef100_B1VFV5 ATP-dependent RNA helicase n=1 Tax=Corynebacterium urealyticum DSM
7109 RepID=B1VFV5_CORU7
Length = 778
Score = 112 bits (279), Expect = 3e-23
Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK D +E++ L + + A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+
Sbjct: 378 RTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 437
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ + +Y++P E++VHR GRTGRAG+ G AV+ T ++R + S+ER SR I
Sbjct: 438 RITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRMLKSIERATKSRLNEIE 497
Query: 362 PPPMEDLPE 388
P ++ + E
Sbjct: 498 LPSVDQVNE 506
[226][TOP]
>UniRef100_B0TII3 Dead/deah box helicase n=1 Tax=Heliobacterium modesticaldum Ice1
RepID=B0TII3_HELMI
Length = 540
Score = 112 bits (279), Expect = 3e-23
Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKR DE+ +L T ++ LHGD++Q QR+R + FR G+ +L+ATDVA+RGLD+
Sbjct: 264 RTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKKFRDGKAELLIATDVAARGLDVE 323
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
NV +I+Y++P PE++VHR GRTGRAG++G A+ + + R + +ER +R +
Sbjct: 324 NVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITLINYREYRQLKLIERVTKARIQRRD 383
Query: 362 PPPMEDLPE 388
P M D+ E
Sbjct: 384 LPSMADIVE 392
[227][TOP]
>UniRef100_C7M2L1 DEAD/DEAH box helicase domain protein n=1 Tax=Acidimicrobium
ferrooxidans DSM 10331 RepID=C7M2L1_ACIFD
Length = 467
Score = 112 bits (279), Expect = 3e-23
Identities = 55/113 (48%), Positives = 80/113 (70%), Gaps = 1/113 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RT+R AD I+ L +A+ A+HGD++Q QRER L+GFR GR LVATDVA+RG+ +
Sbjct: 262 RTRRGADRIAERLRGEGLATAAIHGDLNQRQRERALEGFRAGRIDALVATDVAARGIHVD 321
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVG 340
+V L+IH++ P+ +VHRSGRTGRAG+ G+ V + ++ V SL+R++G
Sbjct: 322 DVPLVIHFDPPERTTDYVHRSGRTGRAGRRGSVVSLVGPRERSFVRSLQRELG 374
[228][TOP]
>UniRef100_C7CMH7 RNA helicase n=1 Tax=Methylobacterium extorquens DM4
RepID=C7CMH7_METED
Length = 510
Score = 112 bits (279), Expect = 3e-23
Identities = 74/203 (36%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Frame = +2
Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD + L +++ S A+HG+ SQ QRER L FR G VLVATD+A+RG+D+
Sbjct: 252 TRTKHGADRVVRGLDKANVVSAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER------DVG 340
V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ + +ER VG
Sbjct: 312 DGVTHVVNYDLPNVPESYVHRIGRTARAGAEGQAISFCNDEERAYLRDIERTTRQKIPVG 371
Query: 341 SRFEFIRPPPMEDLPE-------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD 499
E PP ++ + P RQ + R QR R GG G R
Sbjct: 372 GFPEGFVPPSRQEAQDNAAEEARRPPRQ-----PQGRPGQRQGRPGGGRGQGGEGRGEPR 426
Query: 500 DWSSGGRRPGGDDWSTEGRRSNG 568
+ G RPGG + +R+ G
Sbjct: 427 AHEARGGRPGGQPGHRQDQRAAG 449
[229][TOP]
>UniRef100_C0XQJ2 Superfamily II helicase (Fragment) n=1 Tax=Corynebacterium
lipophiloflavum DSM 44291 RepID=C0XQJ2_9CORY
Length = 683
Score = 112 bits (279), Expect = 3e-23
Identities = 53/129 (41%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK + +E++ L + ++ A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+
Sbjct: 351 RTKHETEELAEKLRARGFSAAAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVE 410
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ + +Y++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER + E +
Sbjct: 411 RISHVFNYDIPNDIESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATIEEME 470
Query: 362 PPPMEDLPE 388
P ++++ E
Sbjct: 471 LPTVDEVNE 479
[230][TOP]
>UniRef100_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM
12042 RepID=B9Y818_9FIRM
Length = 556
Score = 112 bits (279), Expect = 3e-23
Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TK+ DE++ L S + ALHGD+ Q R +D F++G+ +LVATDVA+RG+D+ +
Sbjct: 250 TKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKINILVATDVAARGIDVDS 309
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
+D++ +Y+LP E +VHR GRTGRAGKEG AV + TA QK + LER S+
Sbjct: 310 MDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYALRDLERTTRSKLTQKPL 369
Query: 365 PPMEDLPEL 391
P +E++ ++
Sbjct: 370 PSLEEVRKI 378
[231][TOP]
>UniRef100_A9DY86 Putative RNA helicase dead-box protein n=1 Tax=Kordia algicida OT-1
RepID=A9DY86_9FLAO
Length = 591
Score = 112 bits (279), Expect = 3e-23
Identities = 54/117 (46%), Positives = 80/117 (68%), Gaps = 1/117 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD ++ L + A+HGD+SQ QR+ + FR + +LVATDVA+RG+D+
Sbjct: 249 RTKRDTQNVAEKLIEDGYNAAAIHGDLSQNQRDLVMKSFRTRQIQMLVATDVAARGIDVD 308
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352
++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE
Sbjct: 309 DITHVINYQLPDEIETYTHRSGRTGRAGKNGVSMVIVTKSEMRKIKSIERKIQKKFE 365
[232][TOP]
>UniRef100_A6FR40 Putative ATP-dependent RNA helicase, putative n=1 Tax=Roseobacter
sp. AzwK-3b RepID=A6FR40_9RHOB
Length = 470
Score = 112 bits (279), Expect = 3e-23
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 4/180 (2%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK +D+++ L + A A+HG+ SQ QRER L FR G VLVATDVA+RGLDIP
Sbjct: 283 RTKHGSDKLARKLEQAGYAVAAIHGNKSQGQRERALRAFRDGEVRVLVATDVAARGLDIP 342
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V + +++LP+ PE +VHR GRT RAG++GAAV + + +++ + +
Sbjct: 343 DVKHVYNFDLPNVPENYVHRIGRTARAGRDGAAVAFCAPDEMGELKDIQKVMKMSIPVLS 402
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG---GRRPGG 532
E+LP+ + S G R + G + GG + G +G D + G RR GG
Sbjct: 403 GRAWEELPD--PKAAPSGRGGPRRGRGGAKGGGGQGQANGHGAGQPDQAQGRPRRRRRGG 460
[233][TOP]
>UniRef100_Q234J0 DEAD/DEAH box helicase family protein n=1 Tax=Tetrahymena
thermophila SB210 RepID=Q234J0_TETTH
Length = 744
Score = 112 bits (279), Expect = 3e-23
Identities = 56/125 (44%), Positives = 77/125 (61%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK +A+EI + LHGDI Q QRE T GFR+G+F LVAT+VA+RGLDIP V
Sbjct: 335 TKNEANEIMLKANIKQDVQVLHGDIPQKQREITFQGFREGKFKCLVATNVAARGLDIPEV 394
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DLI+ E P + ++HRSGRTGRAGK+G + +T Q+ + +E+ + + + P
Sbjct: 395 DLIVQLEPPKELDAYIHRSGRTGRAGKKGVCITFYTKKQQSLIERIEKKCHIKMQKVGAP 454
Query: 368 PMEDL 382
DL
Sbjct: 455 QPADL 459
[234][TOP]
>UniRef100_C3XZX1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma
floridae RepID=C3XZX1_BRAFL
Length = 655
Score = 112 bits (279), Expect = 3e-23
Identities = 55/125 (44%), Positives = 80/125 (64%)
Frame = +2
Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187
TK++A+++ ++ LHGDI Q QRE TL FR G VLVATDVA+RGLDIP V
Sbjct: 352 TKKEANQLVLEGVLKQEAQVLHGDIPQAQRELTLKSFRDGNIQVLVATDVAARGLDIPEV 411
Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367
DL++ E P ++++HRSGRTGRAG+ G V + ++++ + +ER G +F I P
Sbjct: 412 DLVVQCEPPSDVDSYIHRSGRTGRAGRTGVCVCFYKPNREQDLRFVERRAGIKFRQINAP 471
Query: 368 PMEDL 382
+D+
Sbjct: 472 QPDDI 476
[235][TOP]
>UniRef100_Q75B50 ATP-dependent RNA helicase DED1 n=1 Tax=Eremothecium gossypii
RepID=DED1_ASHGO
Length = 623
Score = 112 bits (279), Expect = 3e-23
Identities = 76/195 (38%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Frame = +2
Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR AD ++ + + ++++ A+HGD +Q +RER L FR GR VLVAT VA+RGLDIPN
Sbjct: 411 TKRMADALTDFLIMQNLSATAIHGDRTQAERERALAFFRTGRANVLVATAVAARGLDIPN 470
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364
V +I+Y+LP + +VHR GRTGRAG G A F K V L
Sbjct: 471 VTHVINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFNRGNKNVVKEL------------- 517
Query: 365 PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGR------RSGGDDWSSGGRRP 526
D+ E ++V S L + + + Y GG S GGR S D GG
Sbjct: 518 ---VDILEEANQEVPSFLSQ-IAKEMSYGGGGGKSSRGGRGGYSRGNSTRDFRRHGG--G 571
Query: 527 GGDDWSTEGRRSNGY 571
GG +WS+ R S+G+
Sbjct: 572 GGSEWSSANRASSGW 586
[236][TOP]
>UniRef100_UPI00016AE806 ATP-dependent RNA helicase n=1 Tax=Burkholderia pseudomallei B7210
RepID=UPI00016AE806
Length = 347
Score = 111 bits (278), Expect = 3e-23
Identities = 73/178 (41%), Positives = 100/178 (56%), Gaps = 1/178 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 182 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 241
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 242 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 294
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
R P ++ E + DR N RG R GG+ +GGRR GG GG GG
Sbjct: 295 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGG---KPGGGHGGG 346
[237][TOP]
>UniRef100_UPI00016ADCF4 ATP-dependent RNA helicase n=1 Tax=Burkholderia thailandensis
MSMB43 RepID=UPI00016ADCF4
Length = 475
Score = 111 bits (278), Expect = 3e-23
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 312 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 371
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 372 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 424
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529
R P ++ E + DR N RG R GG+ +GGRR GG GG R G
Sbjct: 425 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGG---KPGGGRSG 475
[238][TOP]
>UniRef100_Q8Y0U1 Putative atp-dependent rna helicase protein n=1 Tax=Ralstonia
solanacearum RepID=Q8Y0U1_RALSO
Length = 608
Score = 111 bits (278), Expect = 3e-23
Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 10/198 (5%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKRDAD ++ LT + ++ ALHGD+ Q R RTL R+G+ VLVATDVA+RG+D+
Sbjct: 300 TATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDV 359
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P++ +++++LP E +VHR GRTGRAG+ G A+ + +ER V R +
Sbjct: 360 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRRIDAT 419
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDW---------SSGGRRSGGDDWSS 511
+E R G DR RG GG +W +G +GG+
Sbjct: 420 VVEGLEPKRSPKPRSGGPRAGGDRGGYRG--NGGGNWRGQRDGYAARTGNGGNGGNSEGR 477
Query: 512 GGRRPGGDDWSTEGRRSN 565
R GGD S RR +
Sbjct: 478 FQRSFGGDRESFAPRRDD 495
[239][TOP]
>UniRef100_Q13X86 Putative ATP-dependent RNA helicase n=1 Tax=Burkholderia xenovorans
LB400 RepID=Q13X86_BURXL
Length = 537
Score = 111 bits (278), Expect = 3e-23
Identities = 75/192 (39%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI
Sbjct: 319 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 378
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+
Sbjct: 379 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 431
Query: 359 RPPPMEDLPE--LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
R P ++ E P + S GR RG GG + GGRR G S G+ G
Sbjct: 432 RTPLAVNVVEGFEPRKSAPSGNGRPGFGGRGRPGGG---NGGGRRFG----SGSGKPAGN 484
Query: 533 DDWSTEGRRSNG 568
+ G SNG
Sbjct: 485 GGAARSGTGSNG 496
[240][TOP]
>UniRef100_C6XEK8 DEAD/DEAH box helicase domain protein n=1 Tax=Methylovorus sp.
SIP3-4 RepID=C6XEK8_METSD
Length = 468
Score = 111 bits (278), Expect = 3e-23
Identities = 75/196 (38%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
T TKR AD ++ L + S ALHGD++Q R RTL R G VLVATDVA+RG+D+
Sbjct: 253 TSTKRHADLLAEDLYAAGHKSAALHGDMTQGARNRTLTKLRHGDVRVLVATDVAARGIDV 312
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +I+Y+LP E +VHR GRTGRAG G AV + + + + +E+ G R E
Sbjct: 313 QGITHVINYDLPKFAEDYVHRIGRTGRAGNTGVAVSFASHADRHQLRKIEQYTGQRIEIT 372
Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGG------RRSGGDDWSSGGR 520
E P + GR RS G ++G GG R + G S G R
Sbjct: 373 VIEGFEPKRPAPRSDDRGSNGRPRSGNPGSKSGFKPRGQGGYAGNNPRSASGAGNSEGNR 432
Query: 521 RPGGDDWSTEGRRSNG 568
GG +EG RS G
Sbjct: 433 GFGG---RSEGNRSEG 445
[241][TOP]
>UniRef100_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446
RepID=C8WWM6_ALIAC
Length = 541
Score = 111 bits (278), Expect = 3e-23
Identities = 54/129 (41%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKR D++ +L + + LHGD+SQ QR+R + FR+ +LVATDVA+RGLD+
Sbjct: 262 RTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELLVATDVAARGLDVD 321
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V +I+Y++P PE++VHR GRTGRAGK G A+ + T + + + +ER++ +
Sbjct: 322 DVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKLLKQIEREIKQKITVRE 381
Query: 362 PPPMEDLPE 388
P +ED+ E
Sbjct: 382 VPSLEDVAE 390
[242][TOP]
>UniRef100_B7DS98 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus
acidocaldarius LAA1 RepID=B7DS98_9BACL
Length = 465
Score = 111 bits (278), Expect = 3e-23
Identities = 54/129 (41%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKR D++ +L + + LHGD+SQ QR+R + FR+ +LVATDVA+RGLD+
Sbjct: 263 RTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELLVATDVAARGLDVD 322
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+V +I+Y++P PE++VHR GRTGRAGK G A+ + T + + + +ER++ +
Sbjct: 323 DVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKLLKQIEREIKQKITVRE 382
Query: 362 PPPMEDLPE 388
P +ED+ E
Sbjct: 383 VPSLEDVAE 391
[243][TOP]
>UniRef100_B4WNH7 DbpA RNA binding domain family n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WNH7_9SYNE
Length = 570
Score = 111 bits (278), Expect = 3e-23
Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSSIASKA-LHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTK E+S L + + A L GD+ Q QRERT++ RQG+ +LVATDVA+RGLD+
Sbjct: 253 RTKVATVELSEKLEARGYNTAPLSGDVPQNQRERTVERLRQGKLDILVATDVAARGLDVE 312
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
+ +I+Y++P PE +VHR GRTGRAG+EG A++ T +KR + S+ER R E +
Sbjct: 313 RISHVINYDMPYDPEAYVHRIGRTGRAGREGEAILFVTPREKRLLSSIERSTRQRIERM- 371
Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442
E+P+ +VV+ +R Q+
Sbjct: 372 --------EMPSTEVVNDQRIERFKQK 390
[244][TOP]
>UniRef100_A7V1A9 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC
8492 RepID=A7V1A9_BACUN
Length = 425
Score = 111 bits (278), Expect = 3e-23
Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178
TRTK AD+++ +L+ S I ++A+HG+ SQ R+R L GF+ VL+ATD+A+RG+D+
Sbjct: 248 TRTKYGADKLARTLSKSGIRAEAIHGNKSQNARQRALTGFKNHELRVLIATDIAARGIDV 307
Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358
+ +I+YELP+ PET+VHR GRTGRAG +G A+ + + + +++ +G I
Sbjct: 308 DQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDIQKLIGKSIPVI 367
Query: 359 RPPPMEDLPELPTRQV----VSTLGRDRSNQRGYRTGGDDW 469
+ P L +++ + ++ RG RT GD W
Sbjct: 368 KEHPFVTADGLKAQKIKTEEIKAKTKENKIYRGSRTNGDFW 408
[245][TOP]
>UniRef100_A3UBX0 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=1
Tax=Croceibacter atlanticus HTCC2559 RepID=A3UBX0_9FLAO
Length = 623
Score = 111 bits (278), Expect = 3e-23
Identities = 55/139 (39%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
RTKRD +++ L ++ A+HGD+SQ QR+ + FR + +LVATDVA+RG+D+
Sbjct: 231 RTKRDTQKVAEQLIQDGYSAGAIHGDLSQNQRDLVMRSFRTRQIQMLVATDVAARGIDVD 290
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
++ +IHY LPD PE + HRSGRTGRAGK G ++ + T S+ R + ++E+ + FE
Sbjct: 291 DITHVIHYTLPDEPEVYTHRSGRTGRAGKSGTSMTIATKSEMRKIKAIEKRIQRNFERKD 350
Query: 362 PPPMEDLPELPTRQVVSTL 418
P E++ ++ + S +
Sbjct: 351 VPDGEEICQVQLFHLASQI 369
[246][TOP]
>UniRef100_B9N3Z3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z3_POPTR
Length = 402
Score = 111 bits (278), Expect = 3e-23
Identities = 54/64 (84%), Positives = 63/64 (98%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T+TKRDADE+S +LT++IAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP
Sbjct: 60 TQTKRDADEVSMALTNTIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 119
Query: 182 NVDL 193
NVDL
Sbjct: 120 NVDL 123
[247][TOP]
>UniRef100_Q4CYD2 Nucleolar RNA helicase II, putative n=1 Tax=Trypanosoma cruzi
RepID=Q4CYD2_TRYCR
Length = 633
Score = 111 bits (278), Expect = 3e-23
Identities = 56/141 (39%), Positives = 85/141 (60%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK++ ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P
Sbjct: 314 TNTKKECHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 372
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL+I P + F+HR+GRTGRAG++G V++ + V +ER +FE +
Sbjct: 373 MVDLVIQCAPPTDIDAFIHRAGRTGRAGRKGVCVLLHQPKDEYIVERIERHAKIKFEVLP 432
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
P +++ R L R
Sbjct: 433 APTRDEILRAVARDAAEDLAR 453
[248][TOP]
>UniRef100_Q4CUA4 Nucleolar RNA helicase II, putative n=1 Tax=Trypanosoma cruzi
RepID=Q4CUA4_TRYCR
Length = 660
Score = 111 bits (278), Expect = 3e-23
Identities = 56/141 (39%), Positives = 85/141 (60%)
Frame = +2
Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181
T TK++ ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P
Sbjct: 314 TNTKKECHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 372
Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361
VDL+I P + F+HR+GRTGRAG++G V++ + V +ER +FE +
Sbjct: 373 MVDLVIQCAPPTDIDAFIHRAGRTGRAGRKGVCVLLHQPKDEYIVERIERHAKIKFEVLP 432
Query: 362 PPPMEDLPELPTRQVVSTLGR 424
P +++ R L R
Sbjct: 433 APTRDEILRAVARDAAEDLAR 453
[249][TOP]
>UniRef100_C6H4W7 ATP-dependent RNA helicase DED1 n=1 Tax=Ajellomyces capsulatus H143
RepID=C6H4W7_AJECH
Length = 694
Score = 111 bits (278), Expect = 3e-23
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 5/180 (2%)
Frame = +2
Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR AD +S + L + + A+HGD +Q +RER L+ FR GR +LVAT VA+RGLDIPN
Sbjct: 470 TKRQADMLSDFLLDHRLPATAIHGDRTQRERERALELFRTGRCPILVATAVAARGLDIPN 529
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQK----RTVISLERDVGSRFE 352
V +I+Y+LP+ + +VHR GRTGRAG G + F+ S+ R+++ L +D
Sbjct: 530 VTHVINYDLPNEIDDYVHRIGRTGRAGNTGISTAFFSRSKNFKIARSLVDLLKDAN---- 585
Query: 353 FIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
+++P+ + LGR + N G GG GGR GG + RR GG
Sbjct: 586 -------QEVPDF-----LEKLGR-QGNYYGSSGGGRGGRGGGRGRGGSSSTRDIRRTGG 632
[250][TOP]
>UniRef100_C0NAF4 ATP-dependent RNA helicase DED1 n=1 Tax=Ajellomyces capsulatus
G186AR RepID=C0NAF4_AJECG
Length = 694
Score = 111 bits (278), Expect = 3e-23
Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 5/180 (2%)
Frame = +2
Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184
TKR AD +S + L + + A+HGD +Q +RER L+ FR GR +LVAT VA+RGLDIPN
Sbjct: 470 TKRQADMLSDFLLDHRLPATAIHGDRTQRERERALELFRTGRCPILVATAVAARGLDIPN 529
Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQK----RTVISLERDVGSRFE 352
V +I+Y+LP+ + +VHR GRTGRAG G + F+ S+ R+++ L +D
Sbjct: 530 VTHVINYDLPNEIDDYVHRIGRTGRAGNTGISTAFFSRSKNFKIARSLVDLLKDAN---- 585
Query: 353 FIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532
+++P+ + LGR + N G GG GGR GG + RR GG
Sbjct: 586 -------QEVPDF-----LEKLGR-QGNYYGSSGGGRGGRGGGRGRGGSSSTRDIRRTGG 632