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[1][TOP] >UniRef100_Q2PEW4 Putative uncharacterized protein (Fragment) n=1 Tax=Trifolium pratense RepID=Q2PEW4_TRIPR Length = 402 Score = 380 bits (977), Expect = e-104 Identities = 191/203 (94%), Positives = 191/203 (94%), Gaps = 12/203 (5%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP Sbjct: 139 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 198 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR Sbjct: 199 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 258 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRT------------GGDDWSSGGRRSGGDDW 505 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRT GGDDWSSGGRRSGGDDW Sbjct: 259 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRSGGDDW 318 Query: 506 SSGGRRPGGDDWSTEGRRSNGYS 574 SSGGRRPGGDDWSTEGRRSNGYS Sbjct: 319 SSGGRRPGGDDWSTEGRRSNGYS 341 [2][TOP] >UniRef100_B9N3Y9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Y9_POPTR Length = 735 Score = 222 bits (566), Expect = 1e-56 Identities = 110/139 (79%), Positives = 125/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TRTKRDADE+S +LT SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP Sbjct: 352 TRTKRDADEVSMALTQSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 411 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGKEG A++MFT SQ+RTV SLERD G +FEF+ Sbjct: 412 NVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVS 471 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +E+L E T QVV+TL Sbjct: 472 PPAIEELLESSTEQVVATL 490 [3][TOP] >UniRef100_UPI0001984A30 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984A30 Length = 764 Score = 220 bits (560), Expect = 7e-56 Identities = 108/139 (77%), Positives = 127/139 (91%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 372 TQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 431 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERDVG +FEFI Sbjct: 432 NVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFIS 491 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +E++ E QVV+TL Sbjct: 492 PPAIEEVLESSAEQVVATL 510 [4][TOP] >UniRef100_B9RFT3 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RFT3_RICCO Length = 772 Score = 220 bits (560), Expect = 7e-56 Identities = 110/151 (72%), Positives = 128/151 (84%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP Sbjct: 374 TQTKRDADEVSMVLTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 433 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYELP+ PETFVHRSGRTGRAGKEG AV+MFT+SQ+RTV SLERDVG RFEF+ Sbjct: 434 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAVLMFTSSQRRTVKSLERDVGCRFEFVS 493 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRT 454 PP E++ E QV++TL G+ T Sbjct: 494 PPGTEEVLESSAEQVIATLSGVHPESVGFFT 524 [5][TOP] >UniRef100_A7PRF1 Chromosome chr14 scaffold_27, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PRF1_VITVI Length = 762 Score = 220 bits (560), Expect = 7e-56 Identities = 108/139 (77%), Positives = 127/139 (91%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 365 TQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 424 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERDVG +FEFI Sbjct: 425 NVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFIS 484 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +E++ E QVV+TL Sbjct: 485 PPAIEEVLESSAEQVVATL 503 [6][TOP] >UniRef100_B7EBF8 cDNA clone:J013043E01, full insert sequence n=3 Tax=Oryza sativa Japonica Group RepID=B7EBF8_ORYSJ Length = 597 Score = 216 bits (550), Expect = 1e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 197 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 256 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI Sbjct: 257 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 316 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +ED+ E V++TL Sbjct: 317 PPAIEDVLESSAEHVIATL 335 [7][TOP] >UniRef100_B8AMQ6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=B8AMQ6_ORYSI Length = 779 Score = 216 bits (550), Expect = 1e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 379 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 438 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI Sbjct: 439 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 498 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +ED+ E V++TL Sbjct: 499 PPAIEDVLESSAEHVIATL 517 [8][TOP] >UniRef100_B6SSK6 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SSK6_MAIZE Length = 744 Score = 216 bits (550), Expect = 1e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TRTK+DADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 342 TRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 401 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT+SQKRTV SLERDVG FEFI Sbjct: 402 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFIS 461 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +E++ E V++TL Sbjct: 462 PPSIEEVLESSAEHVIATL 480 [9][TOP] >UniRef100_B4FA24 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FA24_MAIZE Length = 598 Score = 216 bits (550), Expect = 1e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TRTK+DADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 197 TRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 256 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT+SQKRTV SLERDVG FEFI Sbjct: 257 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFIS 316 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +E++ E V++TL Sbjct: 317 PPSIEEVLESSAEHVIATL 335 [10][TOP] >UniRef100_Q0DM51-3 Isoform 3 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica Group RepID=Q0DM51-3 Length = 757 Score = 216 bits (550), Expect = 1e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 358 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 417 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI Sbjct: 418 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 477 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +ED+ E V++TL Sbjct: 478 PPAIEDVLESSAEHVIATL 496 [11][TOP] >UniRef100_Q0DM51 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Oryza sativa Japonica Group RepID=RH3_ORYSJ Length = 758 Score = 216 bits (550), Expect = 1e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 358 TKTKRDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 417 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG RF+FI Sbjct: 418 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFIS 477 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +ED+ E V++TL Sbjct: 478 PPAIEDVLESSAEHVIATL 496 [12][TOP] >UniRef100_Q6L724 ATP-dependent RNA helicase n=1 Tax=Hordeum vulgare RepID=Q6L724_HORVU Length = 764 Score = 216 bits (549), Expect = 1e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TRTKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP Sbjct: 345 TRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 404 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT +Q+RTV SLERDVG +FEFI Sbjct: 405 NVDLIIHYELPNDPETFVHRSGRTGRAGKAGNAILMFTTNQRRTVKSLERDVGCKFEFIG 464 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP ME++ + V++TL Sbjct: 465 PPTMEEVLDSSAEHVIATL 483 [13][TOP] >UniRef100_B9N3Z4 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z4_POPTR Length = 775 Score = 215 bits (547), Expect = 2e-54 Identities = 105/139 (75%), Positives = 125/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT++IAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP Sbjct: 389 TQTKRDADEVSMALTNTIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 448 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ ETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERD G +FEF+ Sbjct: 449 NVDLIIHYELPNDAETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVS 508 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +E++ E QVV+TL Sbjct: 509 PPAIEEVLESSAEQVVATL 527 [14][TOP] >UniRef100_A9PJW0 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJW0_9ROSI Length = 481 Score = 215 bits (547), Expect = 2e-54 Identities = 105/139 (75%), Positives = 125/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT++IAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP Sbjct: 95 TQTKRDADEVSMALTNTIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 154 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ ETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERD G +FEF+ Sbjct: 155 NVDLIIHYELPNDAETFVHRSGRTGRAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVS 214 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP +E++ E QVV+TL Sbjct: 215 PPAIEEVLESSAEQVVATL 233 [15][TOP] >UniRef100_Q2HUZ8 Helicase, C-terminal; Zinc finger, CCHC-type; GUCT n=1 Tax=Medicago truncatula RepID=Q2HUZ8_MEDTR Length = 753 Score = 213 bits (543), Expect = 6e-54 Identities = 106/139 (76%), Positives = 122/139 (87%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SI S+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP Sbjct: 362 TQTKRDADEVSLALTNSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 421 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ PETFVHRSGRTGRAGK G A++MFT SQ+RTV SLERDVG +FEF+ Sbjct: 422 NVDLIIHYELPNDPETFVHRSGRTGRAGKLGTAILMFTGSQRRTVRSLERDVGCKFEFVN 481 Query: 362 PPPMEDLPELPTRQVVSTL 418 P +ED+ E QVV TL Sbjct: 482 APSVEDVLESSAEQVVVTL 500 [16][TOP] >UniRef100_Q8L7S8-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana RepID=Q8L7S8-2 Length = 747 Score = 213 bits (542), Expect = 8e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +L++SIA++ALHGDISQ+QRERTL+ FRQG+FTVLVATDVASRGLDIP Sbjct: 358 TQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIP 417 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYELP+ PETFVHRSGRTGRAGKEG+A++M T+SQKRTV SLERDVG FEFI Sbjct: 418 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFIS 477 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP + DL E QVV+TL Sbjct: 478 PPTVGDLLESSADQVVATL 496 [17][TOP] >UniRef100_Q8L7S8 DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Arabidopsis thaliana RepID=RH3_ARATH Length = 748 Score = 213 bits (542), Expect = 8e-54 Identities = 106/139 (76%), Positives = 124/139 (89%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +L++SIA++ALHGDISQ+QRERTL+ FRQG+FTVLVATDVASRGLDIP Sbjct: 358 TQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIP 417 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYELP+ PETFVHRSGRTGRAGKEG+A++M T+SQKRTV SLERDVG FEFI Sbjct: 418 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFIS 477 Query: 362 PPPMEDLPELPTRQVVSTL 418 PP + DL E QVV+TL Sbjct: 478 PPTVGDLLESSADQVVATL 496 [18][TOP] >UniRef100_A5C4J0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5C4J0_VITVI Length = 786 Score = 212 bits (540), Expect = 1e-53 Identities = 108/148 (72%), Positives = 127/148 (85%), Gaps = 9/148 (6%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT+SIAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVA+RGLDIP Sbjct: 410 TQTKRDADEVSMALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP 469 Query: 182 NVDL---------IIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERD 334 NVDL IIHYELP+ PETFVHRSGRTGRAGKEG A++MFT+SQ+RTV SLERD Sbjct: 470 NVDLKYVDLLFLQIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTSSQRRTVKSLERD 529 Query: 335 VGSRFEFIRPPPMEDLPELPTRQVVSTL 418 VG +FEFI PP +E++ E QVV+TL Sbjct: 530 VGCKFEFISPPAIEEVLESSAEQVVATL 557 [19][TOP] >UniRef100_B8LKW8 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LKW8_PICSI Length = 802 Score = 194 bits (493), Expect = 4e-48 Identities = 95/140 (67%), Positives = 115/140 (82%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADEIS L+S+IA +ALHGDISQ+QRERTL GFR+G+F+ LVATDVA+RGLDI Sbjct: 402 TQTKRDADEISLGLSSTIACEALHGDISQHQRERTLAGFREGKFSALVATDVAARGLDIT 461 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYE P+ PETFVHRSGRTGRAGKEG A++M+ ++ KR V SLE +VG RFE+I Sbjct: 462 NVDLVIHYEFPNDPETFVHRSGRTGRAGKEGIAILMYPSNGKRKVRSLEHEVGCRFEYIN 521 Query: 362 PPPMEDLPELPTRQVVSTLG 421 PP ED+ E T+ V LG Sbjct: 522 PPRQEDVLETSTQHVAKALG 541 [20][TOP] >UniRef100_Q9LUW5 DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Arabidopsis thaliana RepID=RH53_ARATH Length = 616 Score = 179 bits (454), Expect = 1e-43 Identities = 100/194 (51%), Positives = 127/194 (65%), Gaps = 3/194 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD +SY+L S +ALHGDISQ QRERTL GFR G F +LVATDVA+RGLD+P Sbjct: 356 TQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVP 415 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ ETFVHR+GRTGRAGK+G+A+++++ Q R V +ER+VGSRF Sbjct: 416 NVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRF---- 471 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGG---DDWSSGGRRSGGDDWSSGGRRPGG 532 +LP + + +++ ++ G GG D SS G RSGG + G GG Sbjct: 472 ----TELPSIAVERGSASMFEGIGSRSGGSFGGGMRDRGSSFGGRSGGGGY---GGSSGG 524 Query: 533 DDWSTEGRRSNGYS 574 G SN YS Sbjct: 525 YGGGRSGGSSNRYS 538 [21][TOP] >UniRef100_C5YRW1 Putative uncharacterized protein Sb08g021180 n=1 Tax=Sorghum bicolor RepID=C5YRW1_SORBI Length = 618 Score = 178 bits (451), Expect = 3e-43 Identities = 102/195 (52%), Positives = 125/195 (64%), Gaps = 5/195 (2%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD +S+S++ S +ALHGDISQ QRERTL GFR GRF +L+ATDVA+RGLDIP Sbjct: 349 TQTKRDADRLSHSMSRSFQCEALHGDISQSQRERTLGGFRDGRFNILIATDVAARGLDIP 408 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYELP+ E FVHRSGRTGRAGK+G A+VM+ Q R V +ERDVG +F Sbjct: 409 NVDLVIHYELPNSSEIFVHRSGRTGRAGKKGTAIVMYNYEQSRAVRVIERDVGCKF---- 464 Query: 362 PPPMEDLPELPTR-QVVSTLGRDRSNQRGYRTGGDDWSS----GGRRSGGDDWSSGGRRP 526 +LP++ V+ G D G GG ++ GGR GG S GG Sbjct: 465 ----TELPKINVEGSVLLDAGFDSFGGGGGGYGGSNYGRSRGFGGRGGGGFGRSGGG--- 517 Query: 527 GGDDWSTEGRRSNGY 571 GG S GR S G+ Sbjct: 518 GGFGNSGFGRSSGGF 532 [22][TOP] >UniRef100_A9S7H7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S7H7_PHYPA Length = 689 Score = 177 bits (450), Expect = 4e-43 Identities = 82/141 (58%), Positives = 114/141 (80%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD+++ L ++ +ALHGDI+Q QRERTL FR+GRF+VLVATDVA+RGLDIP Sbjct: 303 TQTKRDADDVASVLGRTLGCEALHGDITQSQRERTLASFREGRFSVLVATDVAARGLDIP 362 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL++HYE+P+ PETFVHRSGRTGRAGK+G A++MF+ +QKRT+ ++E DVG +F + Sbjct: 363 NVDLVVHYEIPNDPETFVHRSGRTGRAGKDGTAILMFSENQKRTMRNIEMDVGCKFTLMS 422 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 PP ME++ + ++ + + R Sbjct: 423 PPQMEEVLQASSKAAKAVIQR 443 [23][TOP] >UniRef100_Q9LUW6 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Arabidopsis thaliana RepID=RH9_ARATH Length = 610 Score = 174 bits (440), Expect = 6e-42 Identities = 97/196 (49%), Positives = 125/196 (63%), Gaps = 5/196 (2%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD +++ L S +ALHGDISQ QRERTL GFR G F++LVATDVA+RGLD+P Sbjct: 368 TQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVP 427 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYELP+ ETFVHR+GRTGRAGK+G+A+++ Q R V +E++VGSRF + Sbjct: 428 NVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELP 487 Query: 362 PPPME----DLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRSGGDDWSSGGRRP 526 +E + E + + G RS GY + G SGG GG SSG Sbjct: 488 SIAVERGSASMFEGVGARSGGSFGGGRSGGGGYGSYGSSSGRSGGGSYGGYGGSSGRSGG 547 Query: 527 GGDDWSTEGRRSNGYS 574 GG + G S+ YS Sbjct: 548 GGGSYGGSGGSSSRYS 563 [24][TOP] >UniRef100_A9RFR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFR6_PHYPA Length = 793 Score = 172 bits (437), Expect = 1e-41 Identities = 81/141 (57%), Positives = 110/141 (78%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD+++ ++ ++ +ALHGDISQ QRE+TL+ FR+G F+VLVATDVA+RGLDIP Sbjct: 393 TQTKRDADDVATAMARTLGCEALHGDISQSQREKTLNAFREGNFSVLVATDVAARGLDIP 452 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYE+P+ PETFVHRSGRTGRAGK+G A++M++ Q RT+ +ERDVG +F I Sbjct: 453 NVDLVIHYEIPNDPETFVHRSGRTGRAGKDGTAILMYSDRQTRTMRLIERDVGCKFTKIS 512 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 P +ED+ + T + R Sbjct: 513 APRVEDVLKASTESATDVIKR 533 [25][TOP] >UniRef100_UPI00019844A0 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI00019844A0 Length = 666 Score = 170 bits (431), Expect = 6e-41 Identities = 98/191 (51%), Positives = 118/191 (61%), Gaps = 6/191 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD ++Y++ + +ALHGDISQ QRERTL GFR G F VLVATDVA+RGLDIP Sbjct: 367 TQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIP 426 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ E FVHRSGRTGRAGK+G A++++ Q RTV +ERD+G +F Sbjct: 427 NVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFS--- 483 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR------R 523 ELP R + RD + G G + S G R GG GR R Sbjct: 484 --------ELP-RIAIEGGSRDMFSDMGGGGDGGRFGSFGSRGGGRVGGGFGRSGSSFGR 534 Query: 524 PGGDDWSTEGR 556 GG S GR Sbjct: 535 SGGYGESGSGR 545 [26][TOP] >UniRef100_A5AH66 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5AH66_VITVI Length = 666 Score = 170 bits (431), Expect = 6e-41 Identities = 98/191 (51%), Positives = 118/191 (61%), Gaps = 6/191 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD ++Y++ + +ALHGDISQ QRERTL GFR G F VLVATDVA+RGLDIP Sbjct: 367 TQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIP 426 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHYELP+ E FVHRSGRTGRAGK+G A++++ Q RTV +ERD+G +F Sbjct: 427 NVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKFS--- 483 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR------R 523 ELP R + RD + G G + S G R GG GR R Sbjct: 484 --------ELP-RIAIEGGSRDMLSDMGGGGDGGRFGSFGSRGGGRVGGGFGRSGSSFGR 534 Query: 524 PGGDDWSTEGR 556 GG S GR Sbjct: 535 SGGYGESGSGR 545 [27][TOP] >UniRef100_C5X9H0 Putative uncharacterized protein Sb02g002790 n=1 Tax=Sorghum bicolor RepID=C5X9H0_SORBI Length = 602 Score = 169 bits (429), Expect = 1e-40 Identities = 92/189 (48%), Positives = 119/189 (62%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD ++Y + S +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP Sbjct: 337 TQTKRDADRLAYVMGRSYPCQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 396 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL++HYE+P+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G RF + Sbjct: 397 NVDLVVHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELP 456 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 P+ D + + RS G R G +S G GD SS GG Sbjct: 457 KMPVSD----EAADMFNVTRDTRSRSAGSRRTGGPFSREGYGGFGDHRSSSFGDFGGSSD 512 Query: 542 STEGRRSNG 568 + G R +G Sbjct: 513 RSGGFRDSG 521 [28][TOP] >UniRef100_C0P7U9 Putative uncharacterized protein n=1 Tax=Zea mays RepID=C0P7U9_MAIZE Length = 483 Score = 168 bits (426), Expect = 2e-40 Identities = 98/190 (51%), Positives = 121/190 (63%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD +S++++ S +ALHGDISQ QRERTL GFR GRF +L+ATDVA+RGLDIP Sbjct: 217 TQTKRDADRLSHNMSRSFQCEALHGDISQSQRERTLAGFRDGRFNILIATDVAARGLDIP 276 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM+ Q R V +ERDVG +F Sbjct: 277 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGTAIVMYNYDQSRAVRVIERDVGCKF---- 332 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 +LP++ G S GY +G + SGG G SGG GG Sbjct: 333 ----TELPKITVDGSDLLSGGFDSFGGGY-SGSNYGRSGGFGGRGGFGRSGG--GGGYGN 385 Query: 542 STEGRRSNGY 571 S G S GY Sbjct: 386 SGFGHSSGGY 395 [29][TOP] >UniRef100_UPI0000E129C8 Os07g0143700 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E129C8 Length = 292 Score = 167 bits (424), Expect = 4e-40 Identities = 96/200 (48%), Positives = 127/200 (63%), Gaps = 10/200 (5%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKR+AD ++Y++ S A +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP Sbjct: 25 TQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 84 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYELP+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G +F + Sbjct: 85 NVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTEL- 143 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGY-RTGGDDWSSG-------GRRSGGDDWSSGG 517 P +E E + + + +RS G RTGG + G GR G D+ G Sbjct: 144 -PKIEVADE--ASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDGFG 200 Query: 518 RRP--GGDDWSTEGRRSNGY 571 P GG R +G+ Sbjct: 201 SSPNRGGRSRDAGSRYGSGF 220 [30][TOP] >UniRef100_Q0D8N0 DEAD-box ATP-dependent RNA helicase 53 n=3 Tax=Oryza sativa RepID=RH53_ORYSJ Length = 602 Score = 167 bits (424), Expect = 4e-40 Identities = 96/200 (48%), Positives = 127/200 (63%), Gaps = 10/200 (5%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKR+AD ++Y++ S A +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP Sbjct: 335 TQTKREADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 394 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYELP+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G +F + Sbjct: 395 NVDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTEL- 453 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGY-RTGGDDWSSG-------GRRSGGDDWSSGG 517 P +E E + + + +RS G RTGG + G GR G D+ G Sbjct: 454 -PKIEVADE--ASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDGFG 510 Query: 518 RRP--GGDDWSTEGRRSNGY 571 P GG R +G+ Sbjct: 511 SSPNRGGRSRDAGSRYGSGF 530 [31][TOP] >UniRef100_B9IHF6 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IHF6_POPTR Length = 551 Score = 167 bits (422), Expect = 7e-40 Identities = 96/199 (48%), Positives = 124/199 (62%), Gaps = 8/199 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TKRDAD ++Y++ + +ALHGDISQ RERTL GFR+G F +LVATDVA+RGLD+P Sbjct: 294 TETKRDADRLAYAMAKTYKCEALHGDISQSVRERTLSGFREGHFNILVATDVAARGLDVP 353 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHY LP ETFVHRSGRTGRAGK+G A++++T + R V +ERD G +F Sbjct: 354 NVDLIIHYALPRCSETFVHRSGRTGRAGKKGTAILIYTQDESRQVRIIERDTGCKF---- 409 Query: 362 PPPMEDLPEL----PTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG-GRRP 526 +LP++ + + + +GR R N G G D GGR G ++ SG G R Sbjct: 410 ----LELPKIAVDGESIDMYNDMGRGRFNSFGSPRGFGD---GGRYGGQGNYGSGQGFRN 462 Query: 527 GG---DDWSTEGRRSNGYS 574 G D G NGY+ Sbjct: 463 SGFGRSDGQFSGSSRNGYN 481 [32][TOP] >UniRef100_B9HDF9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HDF9_POPTR Length = 556 Score = 165 bits (417), Expect = 3e-39 Identities = 91/175 (52%), Positives = 115/175 (65%), Gaps = 10/175 (5%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TKRDAD ++Y++ + +ALHGDISQ RERTL GFR+G F +LVATDVA+RGLD+P Sbjct: 319 TETKRDADRLAYAMAKNHKCEALHGDISQNVRERTLSGFREGHFNILVATDVAARGLDVP 378 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDLIIHY LP ETFVHRSGRTGRAGK+G A++++T R V +ERD G RF Sbjct: 379 NVDLIIHYALPRCSETFVHRSGRTGRAGKKGTAILIYTQDDARQVKLIERDTGCRF---- 434 Query: 362 PPPMEDLPEL----PTRQVVSTLGRDRSN------QRGYRTGGDDWSSGGRRSGG 496 +LP++ + + + LGR RSN RGY +G +SG RS G Sbjct: 435 ----SELPKIAVDGASLDMHNDLGRGRSNSSGGFGNRGYGSGQGSRNSGFGRSNG 485 [33][TOP] >UniRef100_B6SV06 Nucleolar RNA helicase 2 n=1 Tax=Zea mays RepID=B6SV06_MAIZE Length = 613 Score = 165 bits (417), Expect = 3e-39 Identities = 92/199 (46%), Positives = 121/199 (60%), Gaps = 8/199 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKR+AD ++Y + S +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIP Sbjct: 346 TQTKREADRLAYVMGRSYQCQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIP 405 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL++HYE+P+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G RF + Sbjct: 406 NVDLVVHYEIPNTSELFVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELP 465 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGG--------RRSGGDDWSSGG 517 P+ D + + + RS G R G +S G R GD GG Sbjct: 466 KMPVSD----EAADMFNVMRDTRSRSVGSRRTGGPFSREGYGDFEDHRSRGFGDFDRFGG 521 Query: 518 RRPGGDDWSTEGRRSNGYS 574 G + G R +G S Sbjct: 522 SSDRGGGFRDSGSRYHGGS 540 [34][TOP] >UniRef100_B9GE86 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica Group RepID=B9GE86_ORYSJ Length = 676 Score = 162 bits (411), Expect = 1e-38 Identities = 96/204 (47%), Positives = 121/204 (59%), Gaps = 15/204 (7%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD +SY++ S +ALHGDI+Q QRERTL GFR+G F +L+ATDVA+RGLDIP Sbjct: 397 TQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIP 456 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM + Q R + +E DVG +F + Sbjct: 457 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELP 516 Query: 362 PPPMEDLPELP-----------TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS 508 +E + R+ + GR S GG SG RSGG Sbjct: 517 KINVEGSDLMSGGFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFGRSGGGFGR 576 Query: 509 SG----GRRPGGDDWSTEGRRSNG 568 SG GR GG + RS G Sbjct: 577 SGGGGFGRSSGGGFGDSGFGRSGG 600 [35][TOP] >UniRef100_A7PJZ6 Chromosome chr12 scaffold_18, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PJZ6_VITVI Length = 341 Score = 162 bits (411), Expect = 1e-38 Identities = 77/116 (66%), Positives = 94/116 (81%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD ++Y++ + +ALHGDISQ QRERTL GFR G F VLVATDVA+RGLDIP Sbjct: 218 TQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLVATDVAARGLDIP 277 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF 349 NVDLIIHYELP+ E FVHRSGRTGRAGK+G A++++ Q RTV +ERD+G +F Sbjct: 278 NVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFIERDIGCKF 333 [36][TOP] >UniRef100_A2ZMM6 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2ZMM6_ORYSI Length = 630 Score = 162 bits (411), Expect = 1e-38 Identities = 96/204 (47%), Positives = 121/204 (59%), Gaps = 15/204 (7%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD +SY++ S +ALHGDI+Q QRERTL GFR+G F +L+ATDVA+RGLDIP Sbjct: 349 TQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIP 408 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM + Q R + +E DVG +F + Sbjct: 409 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELP 468 Query: 362 PPPMEDLPELP-----------TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS 508 +E + R+ + GR S GG SG RSGG Sbjct: 469 KINVEGSDLMSGGFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFGRSGGGFGR 528 Query: 509 SG----GRRPGGDDWSTEGRRSNG 568 SG GR GG + RS G Sbjct: 529 SGGGGFGRSSGGGFGDSGFGRSGG 552 [37][TOP] >UniRef100_Q0ILZ4 DEAD-box ATP-dependent RNA helicase 9 n=1 Tax=Oryza sativa Japonica Group RepID=RH9_ORYSJ Length = 628 Score = 162 bits (411), Expect = 1e-38 Identities = 96/204 (47%), Positives = 121/204 (59%), Gaps = 15/204 (7%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD +SY++ S +ALHGDI+Q QRERTL GFR+G F +L+ATDVA+RGLDIP Sbjct: 349 TQTKRDADRLSYTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIP 408 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IH+ELP+ E FVHRSGRTGRAGK+G A+VM + Q R + +E DVG +F + Sbjct: 409 NVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMVENDVGCKFTELP 468 Query: 362 PPPMEDLPELP-----------TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS 508 +E + R+ + GR S GG SG RSGG Sbjct: 469 KINVEGSDLMSGGFDSFGGGGFGREGGGSYGRRGSFGSSSSRGGGFGDSGFGRSGGGFGR 528 Query: 509 SG----GRRPGGDDWSTEGRRSNG 568 SG GR GG + RS G Sbjct: 529 SGGGGFGRSSGGGFGDSGFGRSGG 552 [38][TOP] >UniRef100_A9RFT8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFT8_PHYPA Length = 638 Score = 162 bits (409), Expect = 2e-38 Identities = 78/139 (56%), Positives = 106/139 (76%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD+++ ++ + +A ALHGDISQ QRE+TL+ FR+G TVLVATDVA+RGLD+P Sbjct: 280 TQTKRDADDVAMAMGNLVACGALHGDISQLQREKTLNAFREGNITVLVATDVAARGLDVP 339 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYE+P+ ETFVHR+GRTGRAGK G ++MFT Q RT+ ++E +V RF+ I Sbjct: 340 NVDLVIHYEIPNDSETFVHRTGRTGRAGKTGTNILMFTNQQMRTMRTIESNVKCRFQMIG 399 Query: 362 PPPMEDLPELPTRQVVSTL 418 P ++D+ + QV L Sbjct: 400 APHVKDVMQASFDQVRGAL 418 [39][TOP] >UniRef100_Q0D8N0-2 Isoform 2 of DEAD-box ATP-dependent RNA helicase 53 n=1 Tax=Oryza sativa Japonica Group RepID=Q0D8N0-2 Length = 585 Score = 159 bits (401), Expect = 2e-37 Identities = 92/194 (47%), Positives = 121/194 (62%), Gaps = 10/194 (5%) Frame = +2 Query: 20 ADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNVDLII 199 AD ++Y++ S A +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIPNVDL+I Sbjct: 324 ADRLAYAMGRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVI 383 Query: 200 HYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPPPMED 379 HYELP+ E FVHRSGRT RAGK+G+A++++T Q R V +E+D+G +F + P +E Sbjct: 384 HYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTEL--PKIEV 441 Query: 380 LPELPTRQVVSTLGRDRSNQRGY-RTGGDDWSSG-------GRRSGGDDWSSGGRRP--G 529 E + + + +RS G RTGG + G GR G D+ G P G Sbjct: 442 ADE--ASDMFNVVRDNRSRLAGSPRTGGSSFGRGGYGGFGEGRSRGFGDFDGFGSSPNRG 499 Query: 530 GDDWSTEGRRSNGY 571 G R +G+ Sbjct: 500 GRSRDAGSRYGSGF 513 [40][TOP] >UniRef100_A9T4H8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T4H8_PHYPA Length = 619 Score = 156 bits (395), Expect = 9e-37 Identities = 73/139 (52%), Positives = 103/139 (74%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDAD+++ ++ + ++ ALHGDISQ QRE+TL FR G+ VLVATDVA+RGLD+P Sbjct: 258 TQTKRDADDVAMAMGNLVSCGALHGDISQVQREKTLSAFRDGKIAVLVATDVAARGLDVP 317 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NVDL+IHYE+P+ ETFVHR+GRTGRAG+ G ++MFT+ Q RT+ ++E +V +F+ + Sbjct: 318 NVDLVIHYEIPNDSETFVHRTGRTGRAGRSGTNILMFTSQQVRTMRTIENNVKCKFQIVG 377 Query: 362 PPPMEDLPELPTRQVVSTL 418 P + D+ QV L Sbjct: 378 LPHVRDVMRASFEQVKGAL 396 [41][TOP] >UniRef100_C1E681 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas sp. RCC299 RepID=C1E681_9CHLO Length = 790 Score = 151 bits (382), Expect = 3e-35 Identities = 72/122 (59%), Positives = 95/122 (77%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKR+ADE++ +L +A++ LHGDI+Q QRERTL FR GRF+VLVATDVA+RGLDI Sbjct: 386 TQTKREADEVTAALGRRMATEVLHGDIAQAQRERTLKRFRDGRFSVLVATDVAARGLDIT 445 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +VDL++HYELP E+FVHR GRTGRA K+GAA+ M+T +K + S+ R+ G +F I Sbjct: 446 DVDLVVHYELPHDTESFVHRCGRTGRANKKGAAIAMYTPREKSRIRSIVRETGVKFRVIN 505 Query: 362 PP 367 PP Sbjct: 506 PP 507 [42][TOP] >UniRef100_B4FZ88 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FZ88_MAIZE Length = 255 Score = 150 bits (378), Expect = 9e-35 Identities = 85/183 (46%), Positives = 109/183 (59%), Gaps = 8/183 (4%) Frame = +2 Query: 50 SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNVDLIIHYELPDGPET 229 S +ALHGDISQ QRERTL GFR GRF +LVATDVA+RGLDIPNVDL++HYE+P+ E Sbjct: 4 SYQCQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVVHYEIPNTSEL 63 Query: 230 FVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPPPMEDLPELPTRQVV 409 FVHRSGRT RAGK+G+A++++T Q R V +E+D+G RF + P+ D + Sbjct: 64 FVHRSGRTARAGKKGSAILIYTYEQTRAVRVIEQDIGCRFTELPKMPVSD----EAADMF 119 Query: 410 STLGRDRSNQRGYRTGGDDWSSGG--------RRSGGDDWSSGGRRPGGDDWSTEGRRSN 565 + + RS G R G +S G R GD GG G + G R + Sbjct: 120 NVMRDTRSRSVGSRRTGGPFSREGYGDFEDHRSRGFGDFERFGGSSDRGGGFRDSGSRYH 179 Query: 566 GYS 574 G S Sbjct: 180 GGS 182 [43][TOP] >UniRef100_B9S3L5 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S3L5_RICCO Length = 254 Score = 148 bits (373), Expect = 3e-34 Identities = 88/165 (53%), Positives = 105/165 (63%), Gaps = 8/165 (4%) Frame = +2 Query: 62 KALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNVDLIIHYELPDGPETFVHR 241 +ALHGDISQ QRERTL GFR G F +LVATDVA+RGLD+PNVDL+IHY LP+ ETFVHR Sbjct: 8 EALHGDISQSQRERTLSGFRSGSFNILVATDVAARGLDVPNVDLVIHYALPNCSETFVHR 67 Query: 242 SGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPPPMEDLPELPTRQVVSTLG 421 SGRTGRAGK+G A++++T Q R V ER++G RF ELP R V G Sbjct: 68 SGRTGRAGKKGTAILVYTPDQTRQVKIYEREIGCRF-----------TELP-RITVEGGG 115 Query: 422 RDRSNQ-RGYRTGGDD----WSSGGRRSGGDDWSS---GGRRPGG 532 D + G R GG +G R+GG D+ S GG R GG Sbjct: 116 MDMIDMGNGGRFGGSRDRRFGDTGFGRAGGGDYGSGRFGGNRSGG 160 [44][TOP] >UniRef100_Q72GF3 Heat resistant RNA dependent ATPase n=1 Tax=Thermus thermophilus HB27 RepID=Q72GF3_THET2 Length = 517 Score = 143 bits (360), Expect = 1e-32 Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 1/142 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK + +EI+ L ++ALHGD+SQ +RER L FRQG VLVATDVA+RGLDI Sbjct: 252 TRTKAETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDI 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL++HY LPD E + HRSGRTGRAG+ G V+++ ++R V +LER VG RF+ + Sbjct: 312 PQVDLVVHYRLPDRAEAYQHRSGRTGRAGRGGRVVLLYGPRERRDVEALERAVGRRFKRV 371 Query: 359 RPPPMEDLPELPTRQVVSTLGR 424 PP E++ E R +++ L R Sbjct: 372 NPPTPEEVLEAKWRHLLARLAR 393 [45][TOP] >UniRef100_Q5SM34 ATP-dependent RNA helicase n=2 Tax=Thermus thermophilus RepID=Q5SM34_THET8 Length = 517 Score = 143 bits (360), Expect = 1e-32 Identities = 73/142 (51%), Positives = 98/142 (69%), Gaps = 1/142 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK + +EI+ L ++ALHGD+SQ +RER L FRQG VLVATDVA+RGLDI Sbjct: 252 TRTKAETEEIAQGLLRLGHLAQALHGDLSQGERERVLGAFRQGEVRVLVATDVAARGLDI 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL++HY LPD E + HRSGRTGRAG+ G V+++ ++R V +LER VG RF+ + Sbjct: 312 PQVDLVVHYRLPDRAEAYQHRSGRTGRAGRGGRVVLLYGPRERRDVEALERAVGRRFKRV 371 Query: 359 RPPPMEDLPELPTRQVVSTLGR 424 PP E++ E R +++ L R Sbjct: 372 NPPTPEEVLEAKWRHLLARLAR 393 [46][TOP] >UniRef100_B7A6V9 DEAD/DEAH box helicase domain protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A6V9_THEAQ Length = 513 Score = 142 bits (357), Expect = 2e-32 Identities = 69/142 (48%), Positives = 98/142 (69%), Gaps = 1/142 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T+TK + +E++ L A++A+HGD+SQ RER + FR+G VLVATDVA+RGLDI Sbjct: 244 TKTKAETEEVATGLLRLGHAARAIHGDLSQADRERVMRAFREGEVRVLVATDVAARGLDI 303 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL++HY LPD PET+ HRSGRTGRAG+ G V+++ +KR + LER VG F+ + Sbjct: 304 PEVDLVVHYRLPDKPETYQHRSGRTGRAGRGGEVVILYGPREKRELAELERAVGRPFKRV 363 Query: 359 RPPPMEDLPELPTRQVVSTLGR 424 PP E++ E + +++ L R Sbjct: 364 NPPTPEEVLEAKWQHLLARLAR 385 [47][TOP] >UniRef100_UPI0000164CF2 RNA helicase n=1 Tax=Deinococcus radiodurans R1 RepID=UPI0000164CF2 Length = 560 Score = 140 bits (353), Expect = 7e-32 Identities = 72/124 (58%), Positives = 91/124 (73%), Gaps = 1/124 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTKR+ADE++ L + S+ALHGD++Q QRER L FR GR VLVATDVA+RGLDI Sbjct: 128 TRTKREADELANELIHRGLESEALHGDLAQTQRERALGAFRSGRVGVLVATDVAARGLDI 187 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL++ Y LP PE++VHRSGRTGRAG+ G A++M+ + R V+ LER G RF+ Sbjct: 188 PEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIIMYGDRENREVMGLERITGVRFK-E 246 Query: 359 RPPP 370 RP P Sbjct: 247 RPLP 250 [48][TOP] >UniRef100_Q019E9 ATP-dependent RNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q019E9_OSTTA Length = 683 Score = 139 bits (351), Expect = 1e-31 Identities = 67/122 (54%), Positives = 91/122 (74%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKR ADE++ +L ++ + LHGDI+Q QRERTL FR RFTVL+ATDVA+RGLDI Sbjct: 280 TQTKRAADELTAALGKRVSCEVLHGDIAQAQRERTLQRFRDNRFTVLIATDVAARGLDIS 339 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +VDL+IHYELP+ E+FVHR GRTGRAG++GAA+ M+T + + ++++ G F I Sbjct: 340 DVDLVIHYELPNDVESFVHRCGRTGRAGQQGAAIAMYTDRESYMIRRIQKETGCDFRAID 399 Query: 362 PP 367 P Sbjct: 400 IP 401 [49][TOP] >UniRef100_C1CWT4 Putative DEAD-box ATP-dependent RNA helicase 3 n=1 Tax=Deinococcus deserti VCD115 RepID=C1CWT4_DEIDV Length = 602 Score = 139 bits (350), Expect = 2e-31 Identities = 72/127 (56%), Positives = 91/127 (71%), Gaps = 2/127 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTKR+ADE++ L + ++ALHGD++Q QRER L FR GR VLVATDVA+RGLDI Sbjct: 247 TRTKREADELANELIHRGLEAEALHGDLAQSQRERALGAFRSGRVGVLVATDVAARGLDI 306 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF-EF 355 P VDL++ Y LP PE++VHRSGRTGRAG+ G A++M+ + R V+ LER G RF E Sbjct: 307 PEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIIMYGDRENREVMGLERITGVRFIER 366 Query: 356 IRPPPME 376 P P E Sbjct: 367 PLPTPKE 373 [50][TOP] >UniRef100_C1MMH8 DEAD/DEAH box RNA helicase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MMH8_9CHLO Length = 803 Score = 139 bits (350), Expect = 2e-31 Identities = 67/122 (54%), Positives = 91/122 (74%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKR+ADE++ +L +A++ LHGDI+Q QRERTL FR RF+VLVATDVA+RGLDI Sbjct: 395 TQTKREADEVTAALGRRMATEVLHGDIAQAQRERTLKRFRDNRFSVLVATDVAARGLDIT 454 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +VDL++H+ELP+ E+FVHR GRTGRA K G A+ MFT + + ++ R+ G F+ I Sbjct: 455 DVDLVVHFELPNDTESFVHRCGRTGRANKRGTAIAMFTPRENYRLRTIVRETGVTFKSIN 514 Query: 362 PP 367 P Sbjct: 515 AP 516 [51][TOP] >UniRef100_A4RXF6 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXF6_OSTLU Length = 346 Score = 137 bits (346), Expect = 4e-31 Identities = 68/122 (55%), Positives = 90/122 (73%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKR ADE++ +L +AS+ LHGDI+Q QRERTL FR RF+VL+ATDVA+RGLDI Sbjct: 216 TQTKRAADELTAALGRRVASEVLHGDIAQAQRERTLQRFRDNRFSVLIATDVAARGLDIS 275 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +VDL+IHYELP+ E+FVHR GRTGRAG+ GAA+ M T + + ++++ G F I Sbjct: 276 DVDLVIHYELPNDVESFVHRCGRTGRAGQLGAAIAMHTDRESYMIRRIKKETGCEFRTIG 335 Query: 362 PP 367 P Sbjct: 336 IP 337 [52][TOP] >UniRef100_Q1J0S9 DEAD/DEAH box helicase-like protein n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J0S9_DEIGD Length = 591 Score = 135 bits (340), Expect = 2e-30 Identities = 71/124 (57%), Positives = 90/124 (72%), Gaps = 1/124 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTKR+ADE++ L I S+ALHGD++Q QRER L FR GR VLVATDVA+RGLDI Sbjct: 252 TRTKREADELANELIHRGIESEALHGDLAQSQRERALGAFRSGRVGVLVATDVAARGLDI 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL++ Y LP PE++VHRSGRTGRAG+ G A+VM+ + R + +LE G +F+ Sbjct: 312 PEVDLVVQYHLPQDPESYVHRSGRTGRAGRTGTAIVMYGDRENRELRNLEYRTGVQFK-E 370 Query: 359 RPPP 370 RP P Sbjct: 371 RPLP 374 [53][TOP] >UniRef100_B7G0R3 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0R3_PHATR Length = 822 Score = 135 bits (340), Expect = 2e-30 Identities = 67/128 (52%), Positives = 93/128 (72%), Gaps = 3/128 (2%) Frame = +2 Query: 2 TRTKRDADE-ISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKR+ADE +S + S+ ++ALHGD+ Q QR+ TL FR G F VLVATDVA+RG+DI Sbjct: 442 TETKREADELVSGGVFKSLTAQALHGDVGQKQRDSTLAAFRSGAFNVLVATDVAARGIDI 501 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEF- 355 +VDL+I ++ P +T+VHRSGRTGRAGK+G +V++F Q R ++ +ERD+G F+F Sbjct: 502 QDVDLVIQFDPPRDVDTYVHRSGRTGRAGKKGVSVLLFNQRQSRDIVRIERDLGHGFKFD 561 Query: 356 -IRPPPME 376 + PP E Sbjct: 562 LVGPPSAE 569 [54][TOP] >UniRef100_C1XW74 ATP-dependent RNA helicase DbpA n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XW74_9DEIN Length = 538 Score = 132 bits (333), Expect = 1e-29 Identities = 65/148 (43%), Positives = 100/148 (67%), Gaps = 1/148 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK + DE++ L + I + +HGD+SQ +RER L FR+G TVLVATDVA+RGLDI Sbjct: 254 TRTKAEVDELATGLQARGIGAAPIHGDMSQRERERVLGRFREGTDTVLVATDVAARGLDI 313 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL++H+ LP+ E + HRSGRTGRAG+ G ++ + ++R + +LE V RF+ + Sbjct: 314 PEVDLVVHFRLPEKAEPYQHRSGRTGRAGRSGRVILFYGPRERRELENLEYAVKRRFKRV 373 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQR 442 PP E++ E +++++ L + ++R Sbjct: 374 NPPTPEEVQEAKWQRLLARLAKQPPHER 401 [55][TOP] >UniRef100_A8JGT1 RNA helicase n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGT1_CHLRE Length = 737 Score = 130 bits (327), Expect = 7e-29 Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 1/167 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T +K++A E+S L S+ ++ALHGD++Q RE+TLDGFR+GRF +L+ATDVA+RGLD+ Sbjct: 367 TDSKKEAAELSVVLGDSLGAQALHGDLAQSMREQTLDGFRKGRFAILIATDVAARGLDVT 426 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 ++L++ + P ET++HRSGRTGRAG G V + T + V +E+ G +FE I Sbjct: 427 GIELVLMVDPPADWETYIHRSGRTGRAGSSGVCVTLVTKKMEYMVPIIEKRAGMKFERIG 486 Query: 362 PPPMEDLPELPTRQVVSTLGR-DRSNQRGYRTGGDDWSSGGRRSGGD 499 P D+ + + +S LG D + +R + + S G D Sbjct: 487 APQPADMARIAAERTLSLLGEVDPAVVGHFREAAERYLSESAADGRD 533 [56][TOP] >UniRef100_B8BZG6 RNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BZG6_THAPS Length = 466 Score = 129 bits (324), Expect = 2e-28 Identities = 64/128 (50%), Positives = 93/128 (72%), Gaps = 3/128 (2%) Frame = +2 Query: 2 TRTKRDADE-ISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK++ADE +S S+ +++++A+HGDI Q QR+ TL FR G F VLVATDVA+RG+DI Sbjct: 257 TETKKEADELVSGSVFKTLSAQAIHGDIGQKQRDATLAAFRAGAFNVLVATDVAARGIDI 316 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS--RFE 352 +VDL+I +E P +T+VHRSGRTGRAG G +V++F +Q R ++ +E+ +G +FE Sbjct: 317 KDVDLVIQFEPPRDVDTYVHRSGRTGRAGASGISVLLFQQNQARDIVRIEKSLGHGFKFE 376 Query: 353 FIRPPPME 376 + PP E Sbjct: 377 LLGPPSTE 384 [57][TOP] >UniRef100_C1XGK2 ATP-dependent RNA helicase DbpA n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XGK2_MEIRU Length = 556 Score = 129 bits (323), Expect = 2e-28 Identities = 61/128 (47%), Positives = 90/128 (70%), Gaps = 1/128 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKA-LHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK + ++++ L S S A +HGD+ Q RER ++ FR G +VLVATDVA+RGLDI Sbjct: 245 TSTKAECNDLALGLESRAHSAAPIHGDMGQIDRERVMERFRSGAVSVLVATDVAARGLDI 304 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL++HY LPD E+++HRSGRTGRAG+ G V+++ +KR + +LER++ F+ + Sbjct: 305 PEVDLVVHYRLPDQNESYLHRSGRTGRAGRSGKVVILYGPREKRELETLERELKRNFKRV 364 Query: 359 RPPPMEDL 382 PP E++ Sbjct: 365 NPPTPEEV 372 [58][TOP] >UniRef100_A8J6S5 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J6S5_CHLRE Length = 384 Score = 127 bits (320), Expect = 5e-28 Identities = 60/103 (58%), Positives = 77/103 (74%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK ADE++ ++ ALHGDISQ QRE+ L FR+G++ LVATDVA+RGLDIPNV Sbjct: 282 TKAKADEVNLAVNEFAPCDALHGDISQAQREKALSLFREGKYAALVATDVAARGLDIPNV 341 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTV 316 DL++HY++P E F+HRSGRTGRAGK G AVV+FT + R + Sbjct: 342 DLVVHYDVPQDNEAFLHRSGRTGRAGKTGTAVVLFTDRESRAL 384 [59][TOP] >UniRef100_UPI00019267D4 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Hydra magnipapillata RepID=UPI00019267D4 Length = 685 Score = 127 bits (318), Expect = 8e-28 Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 1/128 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIA-SKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK++A+E+S + SSI S+ LHGDISQ QRE TL GFR G+F L+ATDVA+RGLDI Sbjct: 313 TTTKQEANELS--VESSIPDSQVLHGDISQSQREITLQGFRNGKFNCLIATDVAARGLDI 370 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VDL+I E P+ + ++HR+GRTGRAG+ G VV + Q+ + ++E+ G FE I Sbjct: 371 PEVDLVIQTEPPNDIDFYIHRAGRTGRAGRSGVCVVFYKPGQESEIAAVEKRTGVTFEKI 430 Query: 359 RPPPMEDL 382 PP E++ Sbjct: 431 TPPNPEEI 438 [60][TOP] >UniRef100_C6XMJ7 DEAD/DEAH box helicase domain protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XMJ7_HIRBI Length = 769 Score = 127 bits (318), Expect = 8e-28 Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 14/204 (6%) Frame = +2 Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD++ S + + I A+HG+ SQ QRER L+ FR G VLVATD+A+RG+D+ Sbjct: 252 TRTKHGADKVVSKLMNAGIRCGAIHGNKSQAQRERALNAFRNGDSKVLVATDIAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P V + +YE+P+ PE +VHR GRT RAG+EG A+ + +K+ ++ ++R + + Sbjct: 312 PGVSHVFNYEIPNVPEQYVHRIGRTARAGREGKAISFVSRDEKKYLLDIQRQIRMKI--- 368 Query: 359 RPPPMEDLPE----------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRS--GGDD 502 P+ DLPE V+ R R + G R GG D GGR GG D Sbjct: 369 ---PIVDLPEGFIDQAEEITANATPVIEERPRGRGGRDGAR-GGRDGGRGGRDGGRGGRD 424 Query: 503 WSSGGRRPG-GDDWSTEGRRSNGY 571 GGR G G GR GY Sbjct: 425 GGRGGRDGGRGRSEGRGGRDGGGY 448 [61][TOP] >UniRef100_A9SDC8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SDC8_PHYPA Length = 689 Score = 126 bits (316), Expect = 1e-27 Identities = 68/127 (53%), Positives = 86/127 (67%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK DA E++ +L S A +ALHGDI Q QRE TL GFR G+F+VLVATDVA+RGLDI Sbjct: 369 TETKNDASELAGALKSGTA-RALHGDIPQNQREVTLQGFRTGKFSVLVATDVAARGLDIN 427 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V L+I E P ET++HRSGRTGRAG G +V+ F ++ V +ER G +FE I Sbjct: 428 DVQLVIQCEPPRDAETYIHRSGRTGRAGNTGVSVLFFDRKKEYMVPQIERKAGFKFERIA 487 Query: 362 PPPMEDL 382 P D+ Sbjct: 488 APQPLDI 494 [62][TOP] >UniRef100_C4ZIT1 DEAD/DEAH box helicase domain protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZIT1_THASP Length = 441 Score = 124 bits (312), Expect = 4e-27 Identities = 80/197 (40%), Positives = 104/197 (52%), Gaps = 8/197 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKR ADE+S +L I++ ALHGD+ Q QR RTLD RQGR VLVATDVA+RG+D+ Sbjct: 252 TATKRSADELSLALQEKGISAAALHGDMHQTQRNRTLDRLRQGRIGVLVATDVAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +I+++ P E +VHR GRTGRAG++G A+ + + + ++ER G R Sbjct: 312 AGISHVINFDPPRQAEDYVHRIGRTGRAGRDGIAITLSGPRETGLIRAIERFTGDRLAVH 371 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGR--RSGGDDWSSGG----- 517 P ME P P G G R G SG R GGD SGG Sbjct: 372 TIPGMEPSPRKPA-------GPRPGGNSGRRFGSGAKPSGSSYGRPGGDARRSGGGFSRD 424 Query: 518 RRPGGDDWSTEGRRSNG 568 P + S + RRS G Sbjct: 425 GHPSRSERSHDDRRSRG 441 [63][TOP] >UniRef100_UPI00019267D5 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Hydra magnipapillata RepID=UPI00019267D5 Length = 635 Score = 123 bits (308), Expect = 1e-26 Identities = 61/149 (40%), Positives = 91/149 (61%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK++A+E++ + ++ S+ LHGDI Q QRE TL FR G+F L+ATDVA+RGLDIP Sbjct: 308 TSTKQEANELALNSVINMDSQVLHGDIQQKQRELTLQSFRNGKFNCLIATDVAARGLDIP 367 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL+I E P ++++HR+GRTGRAG++G ++ + Q+ V ++E G F I Sbjct: 368 EVDLVIQTEPPKDVDSYIHRAGRTGRAGRKGVCIIFYKPGQEYGVAAVEHKAGISFTRIG 427 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGY 448 P +DL V +L + + Y Sbjct: 428 APQQKDLIAASAEDAVRSLDEVKEDVISY 456 [64][TOP] >UniRef100_A3WD13 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WD13_9SPHN Length = 484 Score = 122 bits (307), Expect = 1e-26 Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 15/204 (7%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L+ + I + A+HG+ SQ QR+R LD FR+G+ +LVATDVA+RG+DI Sbjct: 257 TRTKHGADRVVKKLSRAGIPANAIHGNKSQPQRQRALDEFRRGKTMILVATDVAARGIDI 316 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P V +++YELP+ PE +VHR GRT RAGK+G A+ ++ + + + G+ + + Sbjct: 317 PGVSHVLNYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAYLKDIRKTTGAELDRL 376 Query: 359 RPP-----------PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDW 505 P P + P TR + + + GD SS ++ GG Sbjct: 377 NLPENFRAVVEGVGPTKPAPRGATRVSAKKIKPKPAGASAGKPAGDG-SSKPKKPGGKHP 435 Query: 506 SSGGR---RPGGDDWSTEGRRSNG 568 S GR RPGG + + RRS G Sbjct: 436 SRKGRPSGRPGGGNPNGNSRRSGG 459 [65][TOP] >UniRef100_Q7UJ92 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Rhodopirellula baltica RepID=Q7UJ92_RHOBA Length = 485 Score = 121 bits (304), Expect = 3e-26 Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 5/182 (2%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD ++ L + + + A+HG+ +Q R RTL+ F+ VLVATDVA+RG+DI Sbjct: 263 TRTKHGADAVARRLVKAGVKAAAIHGNKTQANRVRTLNKFKNDELDVLVATDVAARGIDI 322 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +I+Y+ P+ PE +VHR GRTGRAG+EG V+ + + I++ER++ + Sbjct: 323 DGIQTVINYDTPNTPEAYVHRIGRTGRAGREGETVMFCGGHETKFFIAIEREIK-----L 377 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQR-GYRTGGDDWSSGGRR---SGGDDWSSGGRRP 526 + P LP R + D+++ R G R+GG S GGR SG + GG +P Sbjct: 378 QIPVATGLPGCQPRPLQDPESGDKASSRSGGRSGGGGQSGGGRSRSGSGAQGGTGGGSKP 437 Query: 527 GG 532 GG Sbjct: 438 GG 439 [66][TOP] >UniRef100_A9S0Z8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S0Z8_PHYPA Length = 657 Score = 121 bits (304), Expect = 3e-26 Identities = 65/127 (51%), Positives = 84/127 (66%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK DA E++ L S A +ALHGDI Q QRE TL GFR +F+VLVATDVA+RGLDI Sbjct: 340 TETKNDASELAGVLKSGTA-RALHGDIPQNQREVTLQGFRTSKFSVLVATDVAARGLDIN 398 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V L+I E P ET++HRSGRTGRAG G +V+ + ++ + +ER G +FE I Sbjct: 399 DVQLVIQCEPPRDAETYIHRSGRTGRAGNTGISVLFYDRKKEYMIPQIERKAGFKFERIA 458 Query: 362 PPPMEDL 382 P D+ Sbjct: 459 APQPADI 465 [67][TOP] >UniRef100_UPI0000E48294 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48294 Length = 657 Score = 121 bits (303), Expect = 4e-26 Identities = 60/138 (43%), Positives = 86/138 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TKRDA+E++ S ++ +HGDI Q QRE TL GFR+G+F LV TDVA+RGLDIP V Sbjct: 362 TKRDANELAMSSDVKQETQVMHGDIPQTQREVTLKGFREGKFQCLVTTDVAARGLDIPEV 421 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P ++++HRSGRTGRAG+ G V + ++R + +E G +F+ + P Sbjct: 422 DLVIQCNPPRDVDSYIHRSGRTGRAGRNGVCVCFYKRQEERDLQKVEYKAGIKFKRVSAP 481 Query: 368 PMEDLPELPTRQVVSTLG 421 D+ + + V LG Sbjct: 482 QPSDIIKSSVKDVTDLLG 499 [68][TOP] >UniRef100_B8DTG1 Possible ATP-dependent RNA helicase n=4 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DTG1_BIFA0 Length = 658 Score = 120 bits (301), Expect = 7e-26 Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 17/203 (8%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK A +++++LT S I + LHG++SQ+QR+R L F G+ VLVATDVA+RG+D+ Sbjct: 299 TRTKFQAKKLAHTLTQSGIPAAELHGNLSQHQRDRNLQVFESGQVNVLVATDVAARGIDV 358 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 NV L++ E P+ P++F HRSGRT RAG+ G V + T QKR + L ++V I Sbjct: 359 SNVGLVVQVEPPEDPKSFTHRSGRTARAGQSGDVVTLMTPDQKRKIRHLFKEVD-----I 413 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYR-----------TGGDDWSSGGR----RSG 493 + P+E PE P QV +G+ G+ GG GR Sbjct: 414 KLKPVEVTPESP--QVQELVGQKADPVHGWELPELERRPRKGNGGKSRRDRGRTNRDEER 471 Query: 494 GDDWSSGGRRPG-GDDWSTEGRR 559 G+ + GGRR G G+ TE R Sbjct: 472 GNRSARGGRRTGKGEHRPTERER 494 [69][TOP] >UniRef100_A7HW11 DEAD/DEAH box helicase domain protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW11_PARL1 Length = 448 Score = 120 bits (301), Expect = 7e-26 Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 1/178 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK A+ +S L S + S+A+HG+ SQ R+R LD FR G+ VLVATD+A+RG+D+ Sbjct: 254 TRTKHCANRVSEQLDKSGVLSEAIHGNKSQGARQRALDMFRNGKARVLVATDIAARGIDV 313 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 ++ +I+YELP+ PE++VHR GRT RAGK G A+ AS++ + S+E+ Sbjct: 314 SDITHVINYELPNEPESYVHRIGRTARAGKSGIALSFCDASERSHLRSIEKLTK------ 367 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 RP + D E QV G + + G R GG + R G GG+ GG Sbjct: 368 RPLTVMDTTEWLGEQVAVPAGEPMAKRAGNRNGGGPRNGNSNRQPGKPRRFGGKPGGG 425 [70][TOP] >UniRef100_UPI0001555D90 PREDICTED: hypothetical protein n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D90 Length = 757 Score = 119 bits (299), Expect = 1e-25 Identities = 61/138 (44%), Positives = 90/138 (65%) Frame = +2 Query: 5 RTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 RTK++A E+S S +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP Sbjct: 432 RTKKEATELSLSPAIKQDAQSLHGDIPQKQREITLKGFRSGAFGVLVATNVAARGLDIPE 491 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 VDL++ P+ E+++HRSGRTGRAG+ G V + A ++ + +E+ G F+ I Sbjct: 492 VDLVVQSSPPEDVESYIHRSGRTGRAGRTGICVCFYQAKEEYQLSQVEQKAGITFKRIGV 551 Query: 365 PPMEDLPELPTRQVVSTL 418 P ++ + ++ V+ +L Sbjct: 552 PTTSEVVKASSKDVLRSL 569 [71][TOP] >UniRef100_A9D237 DEAD/DEAH box helicase-like protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D237_9RHIZ Length = 508 Score = 119 bits (299), Expect = 1e-25 Identities = 79/192 (41%), Positives = 107/192 (55%), Gaps = 14/192 (7%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTKR AD+ + L I + A+HG+ SQ QRER L GFR G VL+ATD+A+RG+D+ Sbjct: 259 TRTKRGADKAAKRLEGDGINAAAIHGNKSQGQRERALAGFRAGTVPVLIATDIAARGIDV 318 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P V L+++YELP+ PE +VHR GRT RAG EG AV F A +R SL RD+ + Sbjct: 319 PGVSLVVNYELPNVPEVYVHRIGRTARAGAEGTAVT-FCAPDER---SLLRDIEKMLKV- 373 Query: 359 RPPPMEDLPELPTRQVV-------STLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG- 514 P+E+ PE + + L R + ++G R G GR G+ G Sbjct: 374 -AIPVENAPEGTYVDALADPDGDFAPLNRTQRPRQGARPQGAKPQGQGRNRSGNGQGRGK 432 Query: 515 -----GRRPGGD 535 GR+PGG+ Sbjct: 433 PGGGQGRKPGGN 444 [72][TOP] >UniRef100_A3ZXX1 ATP-dependent RNA helicase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZXX1_9PLAN Length = 447 Score = 119 bits (299), Expect = 1e-25 Identities = 77/196 (39%), Positives = 107/196 (54%), Gaps = 19/196 (9%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T+TK AD ++ L +S I + A+HG+ +Q +R R L+ FR GR VLVATDVA+RG+D+ Sbjct: 246 TKTKHGADRLAKELNASGIRTDAIHGNKTQNKRNRALESFRSGRLQVLVATDVAARGIDV 305 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 V +++++LP PE++VHR GRTGRAGKEG A+ S+ T+ ++ER + + Sbjct: 306 DGVTHVVNFDLPIDPESYVHRIGRTGRAGKEGIALSFCDFSEHGTLRAIERLIRTTITVD 365 Query: 359 RPPPMEDLPEL---------PTRQVVSTLGRDRSN----QRGYRTGGDDWSS-----GGR 484 P P P R + GR N GY GG D S GG Sbjct: 366 ADHPFHVEPRSRGPRSGGGGPRRSYGKSSGRPAGNGGGRSGGYSQGGGDSSERPKTYGGG 425 Query: 485 RSGGDDWSSGGRRPGG 532 RSGG +GG+RP G Sbjct: 426 RSGGAK-RTGGKRPFG 440 [73][TOP] >UniRef100_B6AXU7 ATP-dependent RNA helicase DeaD n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6AXU7_9RHOB Length = 450 Score = 119 bits (298), Expect = 2e-25 Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 1/191 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +++ L + A+ ++HG+ SQ QRER L F+ G VLVATDVA+RGLDIP Sbjct: 256 RTKHGCEKLMKQLVARGFAATSIHGNKSQGQRERALAAFKAGEMKVLVATDVAARGLDIP 315 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAGK+GAA+ + + +E+ + Sbjct: 316 DVRHVYNYELPNVPDAYVHRIGRTARAGKDGAAIAFCAPDEMDLLKDIEKTMKISIPVAS 375 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 P D + + GR + G R GG GGR GG GG+ GG Sbjct: 376 GTPWVDFDGVSAKSRSGMGGRGKGGGGGRRGGG----GGGRPGGGGRPGGGGKPGGGSGK 431 Query: 542 STEGRRSNGYS 574 GRR G S Sbjct: 432 PGGGRRRRGGS 442 [74][TOP] >UniRef100_B3RVR9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RVR9_TRIAD Length = 633 Score = 119 bits (298), Expect = 2e-25 Identities = 60/137 (43%), Positives = 85/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A+E++ S + LHGDI Q QRE TL GFR+G F LVATDVA+RGLDIP V Sbjct: 311 TKKEANELALSSVLKQEVQVLHGDIQQAQREVTLKGFREGNFPCLVATDVAARGLDIPEV 370 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I E P +T++HRSGRTGRA + G + + + + + S+E + G F I P Sbjct: 371 DLVIQCEPPKDADTYIHRSGRTGRANRTGICITFYKPTHQDRIKSIESEAGINFCRIGAP 430 Query: 368 PMEDLPELPTRQVVSTL 418 + D+ + +R +L Sbjct: 431 QLGDIIQATSRDAAKSL 447 [75][TOP] >UniRef100_UPI0001555D8F PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001555D8F Length = 790 Score = 119 bits (297), Expect = 2e-25 Identities = 60/137 (43%), Positives = 89/137 (64%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA E++ + ++ALHGDI+Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 443 TKKDATEMALNSNIKQEAQALHGDIAQSQREITLKGFRNGVFKVLVATNVAARGLDIPEV 502 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + F ++ + +E+ G F+ + P Sbjct: 503 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFFQPRERCQLRYVEQKSGITFKHVNIP 562 Query: 368 PMEDLPELPTRQVVSTL 418 + D+ + ++ +S+L Sbjct: 563 SLVDIIQASSKDAISSL 579 [76][TOP] >UniRef100_A1K278 Putative ATP-dependent RNA helicase n=1 Tax=Azoarcus sp. BH72 RepID=A1K278_AZOSB Length = 447 Score = 119 bits (297), Expect = 2e-25 Identities = 78/196 (39%), Positives = 104/196 (53%), Gaps = 7/196 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK+ ADE+S SL ++ ALHGD+ Q R RTL RQGR VLVATDVA+RG+D+ Sbjct: 252 TATKKSADELSLSLQEKGFSAAALHGDMHQTVRNRTLQRLRQGRIGVLVATDVAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +I+++ P E +VHR GRTGRAG++G A+ + + + ++ER G R Sbjct: 312 AGISHVINFDPPRQVEDYVHRIGRTGRAGRDGIAITLSGPRETGLIRAIERFTGDRLAVH 371 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG-- 532 P +E P P+ GR R G GG GGR GG GGR GG Sbjct: 372 TIPGLEPAPRRPSAPRPGGPGR-RFGSGGKPGGG----FGGRSEGG----YGGRGEGGRG 422 Query: 533 ----DDWSTEGRRSNG 568 D +T RS+G Sbjct: 423 AYGRDGHATRNERSHG 438 [77][TOP] >UniRef100_A6MCY9 DEAD/DEAH box helicase family protein n=1 Tax=Oryza brachyantha RepID=A6MCY9_9ORYZ Length = 688 Score = 119 bits (297), Expect = 2e-25 Identities = 65/129 (50%), Positives = 83/129 (64%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK A E+S + S +ALHGD++Q QRE L GFR G+F VLVAT+VA+RGLDI Sbjct: 366 TETKESASELSGLIAGS---RALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDIN 422 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V LII E P E ++HRSGRTGRAG G AV++F K V +ER+ G +FE I Sbjct: 423 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFDPRHKFNVNRIERESGVKFEHIS 482 Query: 362 PPPMEDLPE 388 P D+ + Sbjct: 483 APQPTDVAQ 491 [78][TOP] >UniRef100_UPI000179595A PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Equus caballus RepID=UPI000179595A Length = 785 Score = 118 bits (296), Expect = 3e-25 Identities = 58/137 (42%), Positives = 89/137 (64%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S S++ + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 449 TKKEAQELSQSVSIKLDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 508 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 509 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEHQLAQVEQKAGIKFKRIGVP 568 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 569 SATEIIKASSKDAIRLL 585 [79][TOP] >UniRef100_UPI00016A33B9 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A33B9 Length = 509 Score = 118 bits (296), Expect = 3e-25 Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 3/193 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 310 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 369 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 370 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 422 Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS-SGGRRPGG 532 R P P+ + R+ DR N RG R GG+ +GGRR GG S +GG R GG Sbjct: 423 RAPLPVNVIEGFEPRKAPPR--NDRGNGRG-RPGGN--GNGGRRFGGKPGSGNGGGRSGG 477 Query: 533 DDWSTEGRRSNGY 571 G GY Sbjct: 478 WSGKPSGGSREGY 490 [80][TOP] >UniRef100_A4CNG8 ATP-dependent RNA helicase n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CNG8_9FLAO Length = 579 Score = 118 bits (296), Expect = 3e-25 Identities = 58/130 (44%), Positives = 90/130 (69%), Gaps = 1/130 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD +++ L + ALHGD+SQ QR+ ++ FR+ + +LVATDVA+RG+D+ Sbjct: 237 RTKRDTQKVAEKLIEDGYNAGALHGDLSQQQRDLVMNAFRKRQLQLLVATDVAARGIDVD 296 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V +IHY+LPD ET+ HRSGRTGRAGK G ++V+ T S++R + ++E+ +G FE + Sbjct: 297 DVTHVIHYQLPDETETYTHRSGRTGRAGKSGVSMVILTRSEQRRIRAIEKIIGRPFEQKK 356 Query: 362 PPPMEDLPEL 391 P ++ E+ Sbjct: 357 LPDGMEICEI 366 [81][TOP] >UniRef100_A6E415 DEAD/DEAH box helicase-like protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6E415_9RHOB Length = 429 Score = 118 bits (295), Expect = 4e-25 Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Frame = +2 Query: 5 RTKRDADEISYSLTSSIAS-KALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +D+++ L + S A+HG+ SQ QRER L FR G +LVATDVA+RGLDIP Sbjct: 247 RTKHGSDKLAKRLEQAGYSVAAIHGNKSQGQRERALKSFRDGHVKILVATDVAARGLDIP 306 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAG++GAA+ + + +++ +G+ Sbjct: 307 DVKHVYNYELPNVPDNYVHRIGRTARAGRDGAAIAFCAPDEMGELKDIQKVLGTTIPVAS 366 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRR-PGGDD 538 P E LP+ + + + G R RTGG SGG + G G RR PGG Sbjct: 367 GRPWEVLPDPKSPKPATGRGGPRR-----RTGGGGGFSGGGQQGKPGAGGGRRRKPGG-- 419 Query: 539 WSTEGRRSN 565 G RSN Sbjct: 420 -GGGGARSN 427 [82][TOP] >UniRef100_B4F9Y2 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4F9Y2_MAIZE Length = 614 Score = 118 bits (295), Expect = 4e-25 Identities = 80/215 (37%), Positives = 105/215 (48%), Gaps = 26/215 (12%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR+AD + Y L S+ ++ ++HGD +Q +RER L F+ G +LVATDVASRGLD+PN Sbjct: 356 TKREADSLQYCLQSNGFSATSIHGDRTQQERERALKSFKSGATPILVATDVASRGLDVPN 415 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVIS-LERDVGSRFEFIR 361 V +I+Y+LP + +VHR GRTGRAGK G A +FT S LE G++ + Sbjct: 416 VAHVINYDLPKSIDDYVHRIGRTGRAGKAGKATALFTESNHHLAKDLLELMTGAKQDV-- 473 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRG--------------------YRTGGDDWSSGG 481 P + D P S GR R G Y + G +S GG Sbjct: 474 PEWLGDYASRPCSGGSSYGGRGRRGGGGFGGRDYRLSSDYGYGGNGGVYSSSGSSYSGGG 533 Query: 482 ----RRSGGDDWSSGGRRPGGDDWSTEGRRSNGYS 574 R GG GG G +S R GYS Sbjct: 534 GGYSSRGGGYSGRGGGYASRGGGYSGGASRGGGYS 568 [83][TOP] >UniRef100_B5RIC3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 (Fragment) n=1 Tax=Salmo salar RepID=B5RIC3_SALSA Length = 611 Score = 117 bits (294), Expect = 5e-25 Identities = 59/137 (43%), Positives = 88/137 (64%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA+E+S + + +S++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 294 TKKDANELSMNASIKQSSQSLHGDIPQKQREITLKGFRSGTFEVLVATNVAARGLDIPEV 353 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G F+ + P Sbjct: 354 DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVEQKAGITFKRVGVP 413 Query: 368 PMEDLPELPTRQVVSTL 418 D+ + ++ V L Sbjct: 414 TANDIIKSSSKDAVRFL 430 [84][TOP] >UniRef100_C4CP01 ATP-dependent RNA helicase DbpA n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=C4CP01_9CHLR Length = 526 Score = 117 bits (294), Expect = 5e-25 Identities = 58/127 (45%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKR DE++ L S A++ALHGD+SQ QR+R + FR G+ +L+ATDVA+RGLD+ Sbjct: 248 RTKRGVDELTQQLQSLGYAAEALHGDLSQVQRDRVMARFRSGQAELLIATDVAARGLDVE 307 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + +I+Y++P PE++VHR GRTGRAG+ GAA+ + T ++R + +ER G R Sbjct: 308 GITHVINYDIPGDPESYVHRIGRTGRAGRAGAAITLVTPRERRLLREIERATGVRMTRRG 367 Query: 362 PPPMEDL 382 P E++ Sbjct: 368 VPTPEEV 374 [85][TOP] >UniRef100_A3W347 Putative ATP-dependent RNA helicase protein n=1 Tax=Roseovarius sp. 217 RepID=A3W347_9RHOB Length = 438 Score = 117 bits (294), Expect = 5e-25 Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 2/189 (1%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +D+++ L + A +HG+ SQ QRER L FR G+ +LVATDVA+RGLDIP Sbjct: 253 RTKHGSDKLAKRLEQAGFAVATIHGNKSQGQRERALKAFRDGQVKILVATDVAARGLDIP 312 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAGK+GAA+ + + +++ +G+ Sbjct: 313 DVKHVYNYELPNVPDNYVHRIGRTARAGKDGAAIAFCAPDEMGELKDIQKVLGTTIPVAS 372 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRR-PGGDD 538 P E LP+ + + S G R G GG + G+ G +G RR PGG Sbjct: 373 GRPWEVLPDPKSPKPTSARGGPRRRSGGGGFGGG--AQHGKPQGKPGAGAGRRRKPGG-- 428 Query: 539 WSTEGRRSN 565 G+RSN Sbjct: 429 -GGSGQRSN 436 [86][TOP] >UniRef100_Q6CLR3 ATP-dependent RNA helicase DED1 n=1 Tax=Kluyveromyces lactis RepID=DED1_KLULA Length = 627 Score = 117 bits (294), Expect = 5e-25 Identities = 75/194 (38%), Positives = 103/194 (53%), Gaps = 6/194 (3%) Frame = +2 Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR AD ++ + + + A+HGD +Q +RER L F+ GR T+LVAT VA+RGLDIPN Sbjct: 425 TKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPN 484 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 V +I+++LP+ + +VHR GRTGRAG G A F K +V + Sbjct: 485 VTHVINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNK--------NVAKELVSLLS 536 Query: 365 PPMEDLPELPT---RQVVSTLGRDRSNQRGYRTGGD--DWSSGGRRSGGDDWSSGGRRPG 529 +++P T R+ S G R + GY G D+ GG SGG +SSGG G Sbjct: 537 EANQEVPSFLTTIMREASSGRGGARGGRGGYNRGNSTRDFRRGGAPSGG--FSSGGGSSG 594 Query: 530 GDDWSTEGRRSNGY 571 G W G S G+ Sbjct: 595 G--WGNGGGSSGGW 606 [87][TOP] >UniRef100_A9WHF7 DEAD/DEAH box helicase domain protein n=2 Tax=Chloroflexus RepID=A9WHF7_CHLAA Length = 552 Score = 117 bits (293), Expect = 6e-25 Identities = 65/162 (40%), Positives = 99/162 (61%), Gaps = 3/162 (1%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RT+++AD+I L A+++LHGD+SQ R+R + FR+G+ VLVATDVA+RGLDI Sbjct: 247 RTRQEADDIGERLQGRGYAAESLHGDLSQAARDRVMRRFREGQLDVLVATDVAARGLDIA 306 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 V +I+Y++P PE++VHR GRTGRAG+EG A+ T ++R + +ER +R E + Sbjct: 307 EVSHVINYDVPTDPESYVHRIGRTGRAGREGVAITFITPRERRMLQIIERVTRTRIERCQ 366 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQ--RGYRTGGDDWSSGG 481 P + D+ +V L ++ GY T D+ + G Sbjct: 367 MPTLADVAARRRSALVDQLRTAMADPALAGYTTLVDELAGTG 408 [88][TOP] >UniRef100_C9D3E2 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D3E2_9RHOB Length = 442 Score = 117 bits (293), Expect = 6e-25 Identities = 75/189 (39%), Positives = 102/189 (53%), Gaps = 1/189 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +++ L + + A+HG+ SQ QRER L F+ G TVLVATDVA+RGLDIP Sbjct: 253 RTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLVATDVAARGLDIP 312 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ +G Sbjct: 313 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAIQKTMGITIPVAS 372 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 E+LP+ P + GR R G R G GGRR G S G +PGG Sbjct: 373 GRAWEELPD-PAAKPARGGGRGRPGGGGGRGKGSGKPGGGRRRFGGGKSEG--QPGGG-- 427 Query: 542 STEGRRSNG 568 E R S G Sbjct: 428 --EARNSAG 434 [89][TOP] >UniRef100_C7JDZ4 RNA helicase n=8 Tax=Acetobacter pasteurianus RepID=C7JDZ4_ACEP3 Length = 445 Score = 117 bits (293), Expect = 6e-25 Identities = 72/192 (37%), Positives = 107/192 (55%), Gaps = 7/192 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T K +A++++ L +++ ++A+HG+ SQ RER + GFR G VLVATD+A+RG+D+ Sbjct: 253 TLMKHEANKVAEFLNKNNVVAEAIHGNKSQGARERAMKGFRSGSVKVLVATDIAARGIDV 312 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 +V + +Y+LP+ PE++VHR GRT RAG++G AV A Q+ + +ER +G + Sbjct: 313 DDVSHVFNYDLPNVPESYVHRIGRTARAGRDGWAVSFCDAEQRAWLRDIERTIGKTVPVV 372 Query: 359 RPPPMEDL-PELPTRQ--VVSTLGRDRSNQRG---YRTGGDDWSSGGRRSGGDDWSSGGR 520 R P E T + V+ GR R RG R G + G GG S GG Sbjct: 373 RDHPWHSAEAEASTMRPPVLGGGGRGRGGPRGGGAPRGGAPRGGAPGGGRGGPRRSGGGA 432 Query: 521 RPGGDDWSTEGR 556 R GG + GR Sbjct: 433 RSGGRSGAPAGR 444 [90][TOP] >UniRef100_C1MQ70 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MQ70_9CHLO Length = 748 Score = 117 bits (293), Expect = 6e-25 Identities = 60/137 (43%), Positives = 85/137 (62%), Gaps = 2/137 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TKRD E+ +L + +KALHGD++Q QRE L GFR +F LVATDVA+RGLDI Sbjct: 392 TKRDCGELQEALQKELEKGAKALHGDVNQAQREVVLAGFRANKFQTLVATDVAARGLDIS 451 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 V+L++ E P PET++HRSGRTGR G G V + T + + ++ER G +F+ I Sbjct: 452 GVELVVQCEPPKEPETYIHRSGRTGRGGATGECVTLCTPRNEWAIPNIERKGGFKFQRIA 511 Query: 362 PPPMEDLPELPTRQVVS 412 PP ++ + V++ Sbjct: 512 PPQPAEMAAAAAKIVIA 528 [91][TOP] >UniRef100_A4RW46 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RW46_OSTLU Length = 654 Score = 117 bits (293), Expect = 6e-25 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 2/122 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TKRD E+ +L I +KALHGD+SQ QRE L GFR+ +F VLVATDVA+RGLDI Sbjct: 345 TKRDCGELCDNLQKEIPKGAKALHGDVSQGQREVVLAGFREDKFQVLVATDVAARGLDIT 404 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 V+L+I E P ET++HRSGRTGRAG G +V + T + V ++ER G +F I Sbjct: 405 GVELVIQCEPPKDAETYIHRSGRTGRAGATGISVTLCTPRSEWAVPNIERKGGFKFVRIG 464 Query: 362 PP 367 PP Sbjct: 465 PP 466 [92][TOP] >UniRef100_A2Z376 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2Z376_ORYSI Length = 685 Score = 117 bits (293), Expect = 6e-25 Identities = 64/129 (49%), Positives = 83/129 (64%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK A ++S + S +ALHGD++Q QRE L GFR G+F VLVAT+VA+RGLDI Sbjct: 365 TETKESASDLSGLIAGS---RALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDIN 421 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V LII E P E ++HRSGRTGRAG G AV++F K V +ER+ G +FE I Sbjct: 422 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHIS 481 Query: 362 PPPMEDLPE 388 P D+ + Sbjct: 482 APQPTDVAQ 490 [93][TOP] >UniRef100_B3L6M6 ATP-dependent helicase, putative n=1 Tax=Plasmodium knowlesi strain H RepID=B3L6M6_PLAKH Length = 722 Score = 117 bits (293), Expect = 6e-25 Identities = 59/128 (46%), Positives = 88/128 (68%), Gaps = 1/128 (0%) Frame = +2 Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK +AD + S S++ LHG+I+Q RE T+ FRQG F +L+ATD+A+RGLDI Sbjct: 408 TRTKLEADILCSEGSFKSLSFAVLHGNIAQTTREHTMQRFRQGMFQILIATDIAARGLDI 467 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 NVDL+I P+ E ++HR+GRTGRA K+G +VV+F++ K+ +I +E++ G +F Sbjct: 468 SNVDLVIQCFPPNYAEIYIHRAGRTGRANKKGVSVVLFSSEDKQDLIKIEKNCGIKFSIE 527 Query: 359 RPPPMEDL 382 + P ED+ Sbjct: 528 QLPNNEDV 535 [94][TOP] >UniRef100_Q650T9 DEAD-box ATP-dependent RNA helicase 7 n=2 Tax=Oryza sativa Japonica Group RepID=RH7_ORYSJ Length = 696 Score = 117 bits (293), Expect = 6e-25 Identities = 64/129 (49%), Positives = 83/129 (64%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK A ++S + S +ALHGD++Q QRE L GFR G+F VLVAT+VA+RGLDI Sbjct: 376 TETKESASDLSGLIAGS---RALHGDVAQAQREVILAGFRSGKFLVLVATNVAARGLDIN 432 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V LII E P E ++HRSGRTGRAG G AV++F K V +ER+ G +FE I Sbjct: 433 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRIERESGVKFEHIS 492 Query: 362 PPPMEDLPE 388 P D+ + Sbjct: 493 APQPTDVAQ 501 [95][TOP] >UniRef100_A2YER4 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2YER4_ORYSI Length = 442 Score = 117 bits (292), Expect = 8e-25 Identities = 84/201 (41%), Positives = 106/201 (52%), Gaps = 12/201 (5%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR+AD + Y L S + A+HGD +Q +RE L F+ G ++VATDVASRGLD+PN Sbjct: 209 TKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPN 268 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISL-------ERDVGS 343 V +I+Y+LP E +VHR GRTGRAGK G+A FT S L ++DV Sbjct: 269 VAHVINYDLPKSVEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPD 328 Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGD-DWS---SGGRRSGGDDWSS 511 P R S G +R R +R G D D+S GG SGG S Sbjct: 329 WLIQYAERPYYGGSSYGGRNRRSGGGGNRFAGRDFRQGSDYDYSGGGGGGGYSGGGGGYS 388 Query: 512 GGRRPGGDDWSTEGRRSNGYS 574 GG R GG +S+ GR GYS Sbjct: 389 GGGRGGG--YSSGGR--GGYS 405 [96][TOP] >UniRef100_UPI0000F2E9E9 PREDICTED: similar to Gu protein n=1 Tax=Monodelphis domestica RepID=UPI0000F2E9E9 Length = 902 Score = 116 bits (291), Expect = 1e-24 Identities = 57/137 (41%), Positives = 87/137 (63%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S + + +++LHGDI Q QRE TL GFR G+F VLVAT+VA+RGLDIP V Sbjct: 600 TKKEAQELSLNESIKQDAQSLHGDIPQKQREITLQGFRNGKFGVLVATNVAARGLDIPEV 659 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ + +ER G F+ + P Sbjct: 660 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQKKEQHQLAQVERQAGITFKRVGVP 719 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 720 SASEIIKASSKDAIRFL 736 [97][TOP] >UniRef100_Q1QZD4 DEAD/DEAH box helicase-like protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZD4_CHRSD Length = 452 Score = 116 bits (291), Expect = 1e-24 Identities = 72/189 (38%), Positives = 104/189 (55%), Gaps = 1/189 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK A+ +S L + I + A+HG+ SQ R + LDGF+ G VLVATD+A+RGLDI Sbjct: 251 RTKHGANRLSRHLEEAGIEAAAIHGNKSQNARTKALDGFKSGEIRVLVATDIAARGLDIN 310 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + ++++ELP+ E +VHR GRTGRAG G A+ + A + + + +ER + E Sbjct: 311 QLPQVVNFELPNVAEDYVHRIGRTGRAGASGHAISLVCAEEGKELAGIERLIRQTLERQT 370 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 E P+ +VS G+ S + G D S GG+R GGD SG + GG+D Sbjct: 371 IAGFE-----PSEALVS--GKGTSPRGGGGQRSDKPSGGGQRRGGDARKSGSGKQGGNDN 423 Query: 542 STEGRRSNG 568 R+ G Sbjct: 424 PAARERNGG 432 [98][TOP] >UniRef100_Q0APZ4 DEAD/DEAH box helicase domain protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0APZ4_MARMM Length = 452 Score = 116 bits (291), Expect = 1e-24 Identities = 76/207 (36%), Positives = 108/207 (52%), Gaps = 16/207 (7%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 +RTK AD+I+ L + S A+HG+ SQ QR + LDGF+ G +LVATD+A+RG+D+ Sbjct: 252 SRTKHGADKINRHLVDYGLKSAAIHGNKSQAQRIKALDGFKTGAVKILVATDIAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER--------- 331 NV +++++LP+ PE++VHR GRT RAGK G AV M + + +ER Sbjct: 312 DNVSHVVNHDLPNLPESYVHRIGRTARAGKSGVAVSMCEPGEYEYLRDIERLTGLDIDRV 371 Query: 332 DVGSRFEFI------RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG 493 VG +F+ P + + P R+ T GR R +G +GG R G Sbjct: 372 FVGDEAKFLAEAKNATPAASQKKQQRPARKKPFTAGRARPQGQG---------NGGSRGG 422 Query: 494 GDDWSSGGRRPGGDDWSTEGRRSNGYS 574 G GG + GG S RR N S Sbjct: 423 GQGGGQGGGQGGG---SKRPRRRNNRS 446 [99][TOP] >UniRef100_C6HUU6 Putative ATP-dependent helicase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUU6_9BACT Length = 472 Score = 116 bits (291), Expect = 1e-24 Identities = 80/193 (41%), Positives = 105/193 (54%), Gaps = 7/193 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTKR A++++ L + S ALHGD SQ QR R L FR G+ +LVATDVA+RGLDI Sbjct: 252 TRTKRGAEDLANQLLAEGFPSDALHGDKSQSQRNRVLSKFRAGQTRILVATDVAARGLDI 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 V +I+Y+LP PE +VHR GRTGRAG+ G A+ + + + +ER +GS + Sbjct: 312 DTVTCVINYDLPQSPEDYVHRIGRTGRAGRSGRAISFCHPADRNLLRDIERLLGSSVP-V 370 Query: 359 RP--PPMEDLPELPTRQ--VVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR-- 520 P PP + + P R S+ G RG RT D GR + GGR Sbjct: 371 SPLSPPPQPKGDRPFRSSGPRSSGGPRPGGFRGERTFRSDAPGEGR----PGFRQGGRTD 426 Query: 521 RPGGDDWSTEGRR 559 RP G +E RR Sbjct: 427 RPAGGSGRSEWRR 439 [100][TOP] >UniRef100_B5ZLE2 DEAD/DEAH box helicase domain protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZLE2_GLUDA Length = 390 Score = 116 bits (291), Expect = 1e-24 Identities = 55/122 (45%), Positives = 86/122 (70%), Gaps = 1/122 (0%) Frame = +2 Query: 2 TRTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK+ AD ++ +L T + + ALHGD Q +R+RTLD FR+GR VLVATDV +RG+D+ Sbjct: 268 TRTKQAADALARTLNTGGVTAAALHGDHGQVRRDRTLDDFRRGRLLVLVATDVMARGIDV 327 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 +V L++++++P+ PET++HR GRT RAG+ G A+ + +++ + +ER G+R I Sbjct: 328 EDVALVVNFDIPEQPETYIHRIGRTARAGRRGTALSLCDPAERLKLRDIERQSGARITVI 387 Query: 359 RP 364 P Sbjct: 388 DP 389 [101][TOP] >UniRef100_Q4QJI9 Nucleolar RNA helicase II, putative n=1 Tax=Leishmania major RepID=Q4QJI9_LEIMA Length = 674 Score = 116 bits (291), Expect = 1e-24 Identities = 57/141 (40%), Positives = 88/141 (62%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P Sbjct: 348 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 406 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL+I P + F+HR+GRTGRAG++G V+++ ++ V +ER +F+ + Sbjct: 407 MVDLVIQCAPPSDIDAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLP 466 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 P E++ + R L R Sbjct: 467 APTREEILKAVARDAAEDLAR 487 [102][TOP] >UniRef100_A9UPZ2 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UPZ2_MONBE Length = 591 Score = 116 bits (291), Expect = 1e-24 Identities = 60/139 (43%), Positives = 84/139 (60%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TK+DA+E++ + LHGDI Q QRE +L FR G+ LVATDVA+RGLDIP Sbjct: 255 TQTKKDANELALETDLRQEVQVLHGDIPQKQREMSLQAFRDGKVRCLVATDVAARGLDIP 314 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL++ E P E+++HRSGRTGRAG+ G + + +Q+ + +ER G F I Sbjct: 315 EVDLVVQCEPPKDVESYIHRSGRTGRAGRTGTCICFYKPNQEDAMRYVERRAGISFRRIG 374 Query: 362 PPPMEDLPELPTRQVVSTL 418 P ED+ + R +L Sbjct: 375 APQPEDVIKASARDAFRSL 393 [103][TOP] >UniRef100_A4HSE3 Nucleolar RNA helicase II, putative (Fragment) n=1 Tax=Leishmania infantum RepID=A4HSE3_LEIIN Length = 629 Score = 116 bits (291), Expect = 1e-24 Identities = 57/141 (40%), Positives = 88/141 (62%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P Sbjct: 348 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 406 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL+I P + F+HR+GRTGRAG++G V+++ ++ V +ER +F+ + Sbjct: 407 MVDLVIQCAPPSDIDAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLP 466 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 P E++ + R L R Sbjct: 467 APTREEILKAVARDAAEDLAR 487 [104][TOP] >UniRef100_A4H460 Nucleolar RNA helicase II, putative n=1 Tax=Leishmania braziliensis RepID=A4H460_LEIBR Length = 689 Score = 116 bits (291), Expect = 1e-24 Identities = 57/141 (40%), Positives = 88/141 (62%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P Sbjct: 348 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 406 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL+I P + F+HR+GRTGRAG++G V+++ ++ V +ER +F+ + Sbjct: 407 MVDLVIQCAPPSDIDAFIHRAGRTGRAGRKGVCVLLYQPREEYVVERIERHAKMKFDVLP 466 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 P E++ + R L R Sbjct: 467 APTREEILKAVARDAAEDLAR 487 [105][TOP] >UniRef100_Q8TFK8 ATP-dependent RNA helicase DED1 n=1 Tax=Candida glabrata RepID=DED1_CANGA Length = 617 Score = 116 bits (291), Expect = 1e-24 Identities = 79/187 (42%), Positives = 103/187 (55%), Gaps = 5/187 (2%) Frame = +2 Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR AD+++ + + + ++ A+HGD SQ +RER L FR GR +LVAT VA+RGLDIPN Sbjct: 411 TKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPN 470 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 V +I+Y+LP + +VHR GRTGRAG G A F V L + + I P Sbjct: 471 VTHVINYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQEI-P 529 Query: 365 PPMED-LPELP---TRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 P +ED L E+ + ST G SN R YR G + S G+ S W G R GG Sbjct: 530 PFLEDCLREVSFSRSGSNRSTRGNRSSNTRDYRKHGGN-GSFGQNSRNSSW--GSARGGG 586 Query: 533 DDWSTEG 553 ST G Sbjct: 587 FGGSTGG 593 [106][TOP] >UniRef100_B7EZD4 cDNA clone:002-104-C03, full insert sequence n=2 Tax=Oryza sativa Japonica Group RepID=B7EZD4_ORYSJ Length = 478 Score = 116 bits (290), Expect = 1e-24 Identities = 78/198 (39%), Positives = 99/198 (50%), Gaps = 9/198 (4%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR+AD + Y L S + A+HGD +Q +RE L F+ G ++VATDVASRGLD+PN Sbjct: 236 TKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPN 295 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISL-------ERDVGS 343 V +I+Y+LP E +VHR GRTGRAGK G+A FT S L ++DV Sbjct: 296 VAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPD 355 Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG-GDDWSSGGRRSGGDDWSSGGR 520 P R S G +R R +R G G +S GG G GG Sbjct: 356 WLVQYAERPYYGGSSYGGRNRRSGGGGNRFAGRDFRQGSGGGYSGGGGGGGYSGGGGGGG 415 Query: 521 RPGGDDWSTEGRRSNGYS 574 GG + G R GYS Sbjct: 416 YSGGGGGYSGGGRGGGYS 433 [107][TOP] >UniRef100_A9HRM2 Putative ATP-dependent RNA helicase rhlE n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HRM2_GLUDA Length = 390 Score = 116 bits (290), Expect = 1e-24 Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%) Frame = +2 Query: 2 TRTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK+ AD ++ +L T + + ALHGD Q +R+RTLD FR+GR VLVATDV +RG+D+ Sbjct: 268 TRTKQAADALARTLNTGGVTAAALHGDHGQVRRDRTLDDFRRGRLLVLVATDVMARGIDV 327 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 V L++++++P+ PET++HR GRT RAG+ G A+ + +++ + +ER G+R I Sbjct: 328 EGVALVVNFDIPEQPETYIHRIGRTARAGRRGTALSLCDPAERLKLRDIERQSGARITVI 387 Query: 359 RP 364 P Sbjct: 388 DP 389 [108][TOP] >UniRef100_C2M5Y9 ATP-dependent RNA helicase, DEAD/DEAH box family n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M5Y9_CAPGI Length = 588 Score = 116 bits (290), Expect = 1e-24 Identities = 57/139 (41%), Positives = 90/139 (64%), Gaps = 1/139 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD ++ L + ALHGD+SQ QR+ + GFR + +LVATDVA+RG+D+ Sbjct: 257 RTKRDTQAVAEKLIEDGYNAAALHGDLSQNQRDLVMKGFRAKQIQMLVATDVAARGIDVD 316 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 ++ +IHY+LPD ET+ HRSGRTGRAGK G ++V+ T S+ + + ++E+ + FE+ Sbjct: 317 DITHVIHYQLPDEIETYTHRSGRTGRAGKSGVSMVILTKSEAKRIKTIEKIIQKTFEYKS 376 Query: 362 PPPMEDLPELPTRQVVSTL 418 P ++ E+ + +T+ Sbjct: 377 IPSGMEICEIQLYHLANTI 395 [109][TOP] >UniRef100_B6R9I6 Dead/deah box helicase domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R9I6_9RHOB Length = 483 Score = 116 bits (290), Expect = 1e-24 Identities = 74/195 (37%), Positives = 108/195 (55%), Gaps = 10/195 (5%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTKR AD +S L + ++S A+HG+ SQ RE++LDGF+ GR +LVATD+A+RG+DI Sbjct: 252 TRTKRGADRVSGHLEKAGLSSAAIHGNKSQRNREKSLDGFKNGRIKILVATDIAARGIDI 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF--- 349 V +++YELP+ PE +VHR GRT RAGK G AV + A+++ + +ER +G + Sbjct: 312 DGVSHVVNYELPNVPEAYVHRIGRTARAGKSGVAVSLCDATEQPYLRDIERLIGRKIPSG 371 Query: 350 EFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRT----GGDDWSSG--GRRSGGDDWSS 511 + D+ L R + Q R GG + S+G GR + G + Sbjct: 372 DSDWDGASGDVSTFDPTAEPQRLKRHKRPQNNRRRNGGGGGANRSAGGAGRAAQGKAGEN 431 Query: 512 GGRRPGGDDWSTEGR 556 G R G + GR Sbjct: 432 GARPAGAKPNAGRGR 446 [110][TOP] >UniRef100_A3UIW5 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UIW5_9RHOB Length = 466 Score = 116 bits (290), Expect = 1e-24 Identities = 67/179 (37%), Positives = 96/179 (53%), Gaps = 3/179 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD ++ L + A+HGD SQ QR R LD F+ G VLVATD+A+RG+D+ Sbjct: 269 TRTKYGADRVAKRLVKYGHKANAIHGDKSQNQRTRALDAFKSGEAPVLVATDIAARGIDV 328 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 VDL+++YELP+ E +VHR GRT RAG G AV + ++ + +E+ +G + Sbjct: 329 DGVDLVVNYELPNVAENYVHRIGRTARAGASGRAVALCAPDERVMLKDIEKTMGVTIQ-- 386 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG--GDDWSSGGRRPG 529 + D P +P + + R R +RG G D + S + S GG R G Sbjct: 387 ---GLNDAPPMPKGEAAKSKRRRRGGRRGQGQGQGDGGGQAQASAPRSGEGSKGGPRGG 442 [111][TOP] >UniRef100_A5KAX3 ATP-dependent helicase, putative n=1 Tax=Plasmodium vivax RepID=A5KAX3_PLAVI Length = 720 Score = 116 bits (290), Expect = 1e-24 Identities = 58/128 (45%), Positives = 87/128 (67%), Gaps = 1/128 (0%) Frame = +2 Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK +AD + S S++ LHG+I+Q RE T+ FRQG F +L+ATD+A+RGLDI Sbjct: 406 TRTKLEADILCSEGSFKSLSFAVLHGNIAQTTREHTMQRFRQGMFQILIATDIAARGLDI 465 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 NVDL+I P+ E ++HR+GRTGRA K+G +VV+F+ K+ ++ +E++ G +F Sbjct: 466 SNVDLVIQCFPPNYAEIYIHRAGRTGRANKKGISVVLFSTEDKQDLVKIEKNCGIKFSIE 525 Query: 359 RPPPMEDL 382 + P ED+ Sbjct: 526 QLPNNEDV 533 [112][TOP] >UniRef100_Q0DB53 DEAD-box ATP-dependent RNA helicase 52A n=2 Tax=Oryza sativa Japonica Group RepID=RH52A_ORYSJ Length = 602 Score = 116 bits (290), Expect = 1e-24 Identities = 78/198 (39%), Positives = 99/198 (50%), Gaps = 9/198 (4%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR+AD + Y L S + A+HGD +Q +RE L F+ G ++VATDVASRGLD+PN Sbjct: 360 TKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPN 419 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISL-------ERDVGS 343 V +I+Y+LP E +VHR GRTGRAGK G+A FT S L ++DV Sbjct: 420 VAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSLAKGLLELMTEAKQDVPD 479 Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG-GDDWSSGGRRSGGDDWSSGGR 520 P R S G +R R +R G G +S GG G GG Sbjct: 480 WLVQYAERPYYGGSSYGGRNRRSGGGGNRFAGRDFRQGSGGGYSGGGGGGGYSGGGGGGG 539 Query: 521 RPGGDDWSTEGRRSNGYS 574 GG + G R GYS Sbjct: 540 YSGGGGGYSGGGRGGGYS 557 [113][TOP] >UniRef100_UPI0001984BEC PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984BEC Length = 1226 Score = 115 bits (289), Expect = 2e-24 Identities = 70/178 (39%), Positives = 97/178 (54%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+ D+++ +LT + A+HGD SQ +R+ L+ FR GR VLVATDVA+RGLDI ++ Sbjct: 416 TKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDI 475 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 ++I+Y+ P G E +VHR GRTGRAG G A F + L + + + + PP Sbjct: 476 RVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRV-PP 534 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 + D+ G RS + G TGG D GGR +D S GGR G W Sbjct: 535 EIRDMASRGG-------GMGRSRRWGSGTGGRDGGRGGR----NDSSYGGRDGGRGGW 581 [114][TOP] >UniRef100_C5X615 Putative uncharacterized protein Sb02g030210 n=1 Tax=Sorghum bicolor RepID=C5X615_SORBI Length = 711 Score = 115 bits (289), Expect = 2e-24 Identities = 65/129 (50%), Positives = 83/129 (64%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK A E+S + S +ALHGD+ Q QRE L GFR G+F VLVAT+VA+RGLDI Sbjct: 383 TETKDSASELSGLIPGS---RALHGDVVQAQREVILAGFRGGKFQVLVATNVAARGLDIN 439 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V LII E P E ++HRSGRTGRAG G AV+++ K +V LER+ G +FE I Sbjct: 440 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYEPRYKYSVNRLERESGVKFEHIS 499 Query: 362 PPPMEDLPE 388 P D+ + Sbjct: 500 APQPTDVAQ 508 [115][TOP] >UniRef100_A7PM74 Chromosome chr14 scaffold_21, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7PM74_VITVI Length = 642 Score = 115 bits (289), Expect = 2e-24 Identities = 70/178 (39%), Positives = 97/178 (54%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+ D+++ +LT + A+HGD SQ +R+ L+ FR GR VLVATDVA+RGLDI ++ Sbjct: 395 TKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIKDI 454 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 ++I+Y+ P G E +VHR GRTGRAG G A F + L + + + + PP Sbjct: 455 RVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRV-PP 513 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 + D+ G RS + G TGG D GGR +D S GGR G W Sbjct: 514 EIRDMASRGG-------GMGRSRRWGSGTGGRDGGRGGR----NDSSYGGRDGGRGGW 560 [116][TOP] >UniRef100_UPI0000D9C370 PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 isoform 1 n=1 Tax=Macaca mulatta RepID=UPI0000D9C370 Length = 697 Score = 115 bits (288), Expect = 2e-24 Identities = 57/137 (41%), Positives = 87/137 (63%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 567 SATEIIKASSKDAIRLL 583 [117][TOP] >UniRef100_UPI0000D9C36F PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 isoform 3 n=1 Tax=Macaca mulatta RepID=UPI0000D9C36F Length = 783 Score = 115 bits (288), Expect = 2e-24 Identities = 57/137 (41%), Positives = 87/137 (63%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 567 SATEIIKASSKDAIRLL 583 [118][TOP] >UniRef100_UPI0000D9C36E PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 isoform 2 n=1 Tax=Macaca mulatta RepID=UPI0000D9C36E Length = 745 Score = 115 bits (288), Expect = 2e-24 Identities = 57/137 (41%), Positives = 87/137 (63%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 567 SATEIIKASSKDAIRLL 583 [119][TOP] >UniRef100_UPI00004E8925 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Pan troglodytes RepID=UPI00004E8925 Length = 783 Score = 115 bits (288), Expect = 2e-24 Identities = 57/137 (41%), Positives = 87/137 (63%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 567 SATEIIKASSKDAIRLL 583 [120][TOP] >UniRef100_Q1W0A0 Putative RNA helicase dead-box protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1W0A0_9FLAO Length = 586 Score = 115 bits (288), Expect = 2e-24 Identities = 55/116 (47%), Positives = 84/116 (72%), Gaps = 1/116 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRDA +++ L ++ ALHGD+SQ QR+ ++ FR+ + +LVATDVA+RG+D+ Sbjct: 250 RTKRDAQKVAEKLIEDGYSASALHGDLSQAQRDMVMNSFRRKQIQMLVATDVAARGIDVD 309 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF 349 ++ +I+Y+LPD E + HRSGRTGRAGKEG ++V+ T S+ R + +ER +G +F Sbjct: 310 DITHVINYQLPDEIEIYTHRSGRTGRAGKEGKSLVIVTKSEVRKIKQVERMIGQKF 365 [121][TOP] >UniRef100_C1FFV4 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FFV4_9CHLO Length = 631 Score = 115 bits (288), Expect = 2e-24 Identities = 60/136 (44%), Positives = 84/136 (61%), Gaps = 2/136 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TKRD E+ +L + +KALHGD++Q QRE LDGFR+ +F LVATDVA+RGLDI Sbjct: 291 TKRDCGELQEALQKELEKGAKALHGDVNQSQREVVLDGFRKNKFQTLVATDVAARGLDIS 350 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 V+L++ E P ET++HRSGRTGR G G V + T + + ++ER G +F I Sbjct: 351 GVELVVQCEPPKEAETYIHRSGRTGRGGATGICVTLCTPRNEWAIPNIERKGGFKFVRIG 410 Query: 362 PPPMEDLPELPTRQVV 409 PP ++ + V+ Sbjct: 411 PPQPAEMVAAAAKIVI 426 [122][TOP] >UniRef100_Q9NR30 Nucleolar RNA helicase 2 n=2 Tax=Homo sapiens RepID=DDX21_HUMAN Length = 783 Score = 115 bits (288), Expect = 2e-24 Identities = 57/137 (41%), Positives = 87/137 (63%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 447 TKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ ++ +E+ G +F+ I P Sbjct: 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLVQVEQKAGIKFKRIGVP 566 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 567 SATEIIKASSKDAIRLL 583 [123][TOP] >UniRef100_UPI0001B412DE ATP-dependent RNA helicase RhlE n=2 Tax=Burkholderia thailandensis RepID=UPI0001B412DE Length = 515 Score = 115 bits (287), Expect = 3e-24 Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 9/198 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 318 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 377 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 378 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 430 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS--SGGR---- 520 R P ++ E + DR N RG R GG +GGRR GG GGR Sbjct: 431 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGG----NGGRRFGGKPGGGHGGGRSGGW 485 Query: 521 --RPGGDDWSTEGRRSNG 568 +PGG+ RRS+G Sbjct: 486 SGKPGGNREGYGARRSDG 503 [124][TOP] >UniRef100_UPI00016A53FE ATP-dependent RNA helicase RhlE n=1 Tax=Burkholderia thailandensis TXDOH RepID=UPI00016A53FE Length = 517 Score = 115 bits (287), Expect = 3e-24 Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 9/198 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 320 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 379 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 380 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 432 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS--SGGR---- 520 R P ++ E + DR N RG R GG +GGRR GG GGR Sbjct: 433 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGG----NGGRRFGGKPGGGHGGGRSGGW 487 Query: 521 --RPGGDDWSTEGRRSNG 568 +PGG+ RRS+G Sbjct: 488 SGKPGGNREGYGARRSDG 505 [125][TOP] >UniRef100_UPI00016E0718 UPI00016E0718 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E0718 Length = 603 Score = 115 bits (287), Expect = 3e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A+E+S + + ++++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 288 TKKEANELSMNASIKQSTQSLHGDIPQKQRETTLKGFRNGSFEVLVATNVAARGLDIPEV 347 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P Sbjct: 348 DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP 407 Query: 368 PMEDLPELPTRQVVSTL 418 D+ + ++ V L Sbjct: 408 TANDIIKSSSKDAVRFL 424 [126][TOP] >UniRef100_UPI00016E06FD UPI00016E06FD related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E06FD Length = 680 Score = 115 bits (287), Expect = 3e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A+E+S + + ++++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 364 TKKEANELSMNASIKQSTQSLHGDIPQKQRETTLKGFRNGSFEVLVATNVAARGLDIPEV 423 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P Sbjct: 424 DLVVQCSPPKDVESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVP 483 Query: 368 PMEDLPELPTRQVVSTL 418 D+ + ++ V L Sbjct: 484 TANDIIKSSSKDAVRFL 500 [127][TOP] >UniRef100_B1H1J4 Ddx21 protein n=1 Tax=Danio rerio RepID=B1H1J4_DANRE Length = 759 Score = 115 bits (287), Expect = 3e-24 Identities = 58/137 (42%), Positives = 88/137 (64%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S + + ++++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 427 TKKEATELSLNTSIKQSAQSLHGDIPQKQREVTLKGFRNGSFEVLVATNVAARGLDIPEV 486 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P+ E+++HRSGRTGRAG+ G + + ++ + +E+ G F+ + P Sbjct: 487 DLVIQSSPPNDVESYIHRSGRTGRAGRTGICICFYQRKEESQLKFVEQKAGITFKRVGVP 546 Query: 368 PMEDLPELPTRQVVSTL 418 D+ + ++ V L Sbjct: 547 TAYDIIQSSSKDAVRFL 563 [128][TOP] >UniRef100_Q2SX26 ATP-dependent RNA helicase RhlE n=1 Tax=Burkholderia thailandensis E264 RepID=Q2SX26_BURTA Length = 482 Score = 115 bits (287), Expect = 3e-24 Identities = 79/198 (39%), Positives = 108/198 (54%), Gaps = 9/198 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 285 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 344 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 345 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 397 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWS--SGGR---- 520 R P ++ E + DR N RG R GG +GGRR GG GGR Sbjct: 398 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGG----NGGRRFGGKPGGGHGGGRSGGW 452 Query: 521 --RPGGDDWSTEGRRSNG 568 +PGG+ RRS+G Sbjct: 453 SGKPGGNREGYGARRSDG 470 [129][TOP] >UniRef100_B8G3I5 DEAD/DEAH box helicase domain protein n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G3I5_CHLAD Length = 550 Score = 115 bits (287), Expect = 3e-24 Identities = 57/127 (44%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RT+++ DEI L A+++LHGD+SQ R+R + FR+G+ VLVATDVA+RGLDI Sbjct: 247 RTRQEVDEIGERLQGRGYAAESLHGDLSQAVRDRVMRRFREGQLDVLVATDVAARGLDIA 306 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 V +I+Y++P PE++VHR GRTGRAG+ G A+ T ++R + ++ER +R E + Sbjct: 307 EVSHVINYDVPTDPESYVHRIGRTGRAGRAGVAITFITPRERRMLQTIERVTRTRIERCQ 366 Query: 362 PPPMEDL 382 P + D+ Sbjct: 367 MPTLADV 373 [130][TOP] >UniRef100_A9AHR3 ATP-dependent RNA helicase n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AHR3_BURM1 Length = 505 Score = 115 bits (287), Expect = 3e-24 Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 9/198 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 303 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 362 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS----- 343 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S Sbjct: 363 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIERFVRSPLPVN 422 Query: 344 ---RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514 FE + PP D R GR + G GG S GG GG G Sbjct: 423 VIEGFEPRKTPPRNDRSNGRGRPGGGNGGRRFGGKPGGGHGGHGRSYGGGNGGGWSGKPG 482 Query: 515 GRRPGGDDWSTEGRRSNG 568 R GG +G+RS+G Sbjct: 483 ASRDGG---RRDGQRSSG 497 [131][TOP] >UniRef100_C8WL27 DEAD/DEAH box helicase domain protein n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WL27_9ACTN Length = 508 Score = 115 bits (287), Expect = 3e-24 Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 5/192 (2%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK ++ + +L + ++++H D SQ QR+R LD FR+GR ++LVATDV +RG+D+P Sbjct: 251 RTKNRTEDCAEALCDAGYRAESIHSDKSQGQRKRALDNFRRGRTSILVATDVLARGIDVP 310 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +VD +I+++LPD PE +VHR GRTGRAG++G AV T +RT+ +E+ +G Sbjct: 311 DVDHVINFDLPDMPEDYVHRIGRTGRAGEQGFAVSFVTRESRRTMSDIEKLIGKNV---- 366 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG--GDDWSSGGRRSGGDDWSSGGRR--PG 529 P+ +L V G+ + ++G G G +G +RS D G +R Sbjct: 367 --PLMELETYELDMTVLEKGKKGAPKKGGYKGNKGSGRPAGAKRS---DKRGGEKRDFER 421 Query: 530 GDDWSTEGRRSN 565 D EGR N Sbjct: 422 RSDSRAEGRSDN 433 [132][TOP] >UniRef100_B9BFM7 Dead/deah box helicase n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BFM7_9BURK Length = 506 Score = 115 bits (287), Expect = 3e-24 Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 9/198 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 303 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 362 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS----- 343 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S Sbjct: 363 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIERFVRSPLPVN 422 Query: 344 ---RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514 FE + PP D R GR + G GG S GG GG G Sbjct: 423 VIEGFEPRKTPPRNDRGNGRGRPGGGNGGRRFGGKPGGGHGGHGRSYGGGNGGGWSGKPG 482 Query: 515 GRRPGGDDWSTEGRRSNG 568 R GG +G+RS+G Sbjct: 483 ASRDGGS--RRDGQRSSG 498 [133][TOP] >UniRef100_B1GAN7 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1GAN7_9BURK Length = 537 Score = 115 bits (287), Expect = 3e-24 Identities = 74/191 (38%), Positives = 100/191 (52%), Gaps = 2/191 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 322 TATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIKALRERRVRVLVATDVAARGIDI 381 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 382 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 434 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTG-GDDWSSGGRRSGGDDWSSGGRRPGGD 535 R P LP VV R + R G G GG SGG + SG +P G Sbjct: 435 RTP-------LPVNVVVGFEPRKSAPSGNGRPGFGGRGRPGGGNSGGRRFGSGSGKPAGS 487 Query: 536 DWSTEGRRSNG 568 S+ NG Sbjct: 488 AGSSRSGSGNG 498 [134][TOP] >UniRef100_A6FZH1 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FZH1_9DELT Length = 437 Score = 115 bits (287), Expect = 3e-24 Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 4/191 (2%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 +RTK A+ I+ L+++ ++S A+HG+ SQ R R L+ F+ G VLVATD+A+RGLDI Sbjct: 249 SRTKHGANRIAKHLSAAGVSSAAIHGNKSQNARTRALEAFKGGELRVLVATDIAARGLDI 308 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 V +I+++LP+ PET++HR GRT RAG G A+ ++ ++ +ER + + E I Sbjct: 309 SKVSHVINFDLPNVPETYIHRIGRTARAGNSGIALSFCDVEERAYLVDIERLLRAHIERI 368 Query: 359 RP---PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529 PP + LPEL + + + + G + SSG R G GG+R G Sbjct: 369 EDHGYPPSQALPEL--TDLAARRSGSKPGGGAKKKSGANKSSGRRGGRGGGGRRGGKRGG 426 Query: 530 GDDWSTEGRRS 562 G + RS Sbjct: 427 GGGPRGQASRS 437 [135][TOP] >UniRef100_A6VJ89 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus maripaludis C7 RepID=A6VJ89_METM7 Length = 546 Score = 115 bits (287), Expect = 3e-24 Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 1/137 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 +TK D DEIS LT A++ LHGD++Q QRE+TLD F+ + VLVATDVA+RG+DI Sbjct: 249 KTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLDKFKARKINVLVATDVAARGIDIN 308 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 ++ +++Y++P PE++VHR GRTGRAGK+G AV S+ R +++ + Sbjct: 309 DLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYIQKIANTEIRKEE 368 Query: 362 PPPMEDLPELPTRQVVS 412 P ++D+ R++VS Sbjct: 369 VPDVKDIIGAKKRKIVS 385 [136][TOP] >UniRef100_UPI0001983370 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001983370 Length = 1864 Score = 114 bits (286), Expect = 4e-24 Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+ D+++ S+ + + +HGD SQ +R+ L+ FR G+ +LVATDVA+RGLDI ++ Sbjct: 752 TKKLCDQLARSIGRNFGAAVIHGDKSQVERDWVLNQFRSGKSPILVATDVAARGLDIKDI 811 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 ++I+Y+ P G E +VHR GRTGRAG G + F+ + L + + + + PP Sbjct: 812 RVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDCKYAADLIKVLEGANQRV-PP 870 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDD--WSSGGRRSGGDDWSSGGRRPGGDDW 541 + D+ + G+DR + +GG W SGGR SG D GGR G D Sbjct: 871 EVRDM----ALRSGPGFGKDRGGVNRFDSGGGGGRWDSGGRGSGMRDGGFGGRGSGMRDG 926 Query: 542 STEGR 556 GR Sbjct: 927 GFGGR 931 [137][TOP] >UniRef100_Q1D514 Putative ATP-dependent RNA helicase RhlE n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D514_MYXXD Length = 501 Score = 114 bits (286), Expect = 4e-24 Identities = 71/193 (36%), Positives = 99/193 (51%), Gaps = 4/193 (2%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK A+ ++ L + ++S A+HG+ SQ RER LD FR G VLVATD+A+RG+DI Sbjct: 251 TRTKHGANRVAKQLEGAGVSSAAIHGNKSQNARERALDEFRSGTLRVLVATDIAARGIDI 310 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +++Y+LP+ PE +VHR GRTGRAG G AV A ++ + +ER + + Sbjct: 311 DGLSYVVNYDLPNVPEQYVHRIGRTGRAGASGTAVSFCDAEERAYLRDIERTIRRNVPVV 370 Query: 359 RPPPMEDLPELPTRQVVSTLG---RDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529 P P R V G R + G R G +G GG + RR G Sbjct: 371 EDHPYRSGQPAP-RPVSHASGAAPEARPSGNGGRPQGTPRPAGNGGGGGHSAGASRRRRG 429 Query: 530 GDDWSTEGRRSNG 568 G + G R G Sbjct: 430 GRGGAGGGGRGQG 442 [138][TOP] >UniRef100_B9L0R0 Cold-shock dead-box protein a n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0R0_THERP Length = 534 Score = 114 bits (286), Expect = 4e-24 Identities = 56/127 (44%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK ADE+++ L S A++A+HGD+SQ R+R + FR G+ +L+ATDVA+RGLDIP Sbjct: 258 RTKSGADELAHKLQSLGYAAEAIHGDLSQAMRDRAMQRFRAGQVDLLIATDVAARGLDIP 317 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 V +I++++P PE++VHR GRTGRAG G A+ + ++ + ++ER +G R R Sbjct: 318 AVSHVINFDIPSDPESYVHRIGRTGRAGATGTAITLIEPRERWLLRTIERAIGQRLIPKR 377 Query: 362 PPPMEDL 382 P E++ Sbjct: 378 IPTREEI 384 [139][TOP] >UniRef100_B2JIF5 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia phymatum STM815 RepID=B2JIF5_BURP8 Length = 556 Score = 114 bits (286), Expect = 4e-24 Identities = 73/192 (38%), Positives = 100/192 (52%), Gaps = 2/192 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD ++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 307 TATKSDADMLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 366 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 367 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 419 Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGD 535 R P P+ + R+ GR RG GG +GGRR GG G R G Sbjct: 420 RAPLPVNVVEGFEPRRAPPAGGRGGFGGRGRPGGG----NGGRRFGGKPAGYGSREGNGG 475 Query: 536 DWSTEGRRSNGY 571 + + GY Sbjct: 476 GYGSRDGNRGGY 487 [140][TOP] >UniRef100_A7NVW1 Chromosome chr5 scaffold_2, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7NVW1_VITVI Length = 837 Score = 114 bits (286), Expect = 4e-24 Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+ D+++ S+ + + +HGD SQ +R+ L+ FR G+ +LVATDVA+RGLDI ++ Sbjct: 424 TKKLCDQLARSIGRNFGAAVIHGDKSQVERDWVLNQFRSGKSPILVATDVAARGLDIKDI 483 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 ++I+Y+ P G E +VHR GRTGRAG G + F+ + L + + + + PP Sbjct: 484 RVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDCKYAADLIKVLEGANQRV-PP 542 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDD--WSSGGRRSGGDDWSSGGRRPGGDDW 541 + D+ + G+DR + +GG W SGGR SG D GGR G D Sbjct: 543 EVRDM----ALRSGPGFGKDRGGVNRFDSGGGGGRWDSGGRGSGMRDGGFGGRGSGMRDG 598 Query: 542 STEGR 556 GR Sbjct: 599 GFGGR 603 [141][TOP] >UniRef100_B7SED9 Vasa-like protein n=1 Tax=Apostichopus japonicus RepID=B7SED9_STIJA Length = 530 Score = 114 bits (286), Expect = 4e-24 Identities = 72/197 (36%), Positives = 100/197 (50%), Gaps = 8/197 (4%) Frame = +2 Query: 2 TRTKRDADEI-SYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKR AD + SY S + ++HGD Q +RE L+ F++ R +VLVAT VASRGLDI Sbjct: 329 TETKRGADFLASYLSQSGFPTTSIHGDREQREREEALNDFKRNRASVLVATSVASRGLDI 388 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P V +++++LP + +VHR GRTGR G G + + + T + I Sbjct: 389 PAVKHVVNFDLPSEIDDYVHRIGRTGRCGNTGLSTSFYNPEKDAT-------ISRALIKI 441 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD-------DWSSGG 517 +D+PE S +G N G GG D SG RR GG DW+SGG Sbjct: 442 LADAHQDVPEFLENVADSAIGTYHGNTGG-GFGGRDTRSGPRRGGGGGGNRGNRDWNSGG 500 Query: 518 RRPGGDDWSTEGRRSNG 568 + G + W++ G G Sbjct: 501 QGGGQESWNSGGGGGGG 517 [142][TOP] >UniRef100_UPI0001984F7F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984F7F Length = 711 Score = 114 bits (285), Expect = 5e-24 Identities = 63/139 (45%), Positives = 86/139 (61%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK A E++ L + +ALHGDI Q QRE TL GFR G+F LVAT+VA+RGLDI Sbjct: 380 TETKDSASELAGLLPGA---RALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDIN 436 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V LII E P E ++HRSGRTGRAG G AV++F ++ + +ER+ G +FE + Sbjct: 437 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLFD-PRRSNISKIERESGVKFEHVS 495 Query: 362 PPPMEDLPELPTRQVVSTL 418 P D+ + + T+ Sbjct: 496 APQPADIAKSAGVEAAGTI 514 [143][TOP] >UniRef100_UPI00005A07BE PREDICTED: similar to Nucleolar RNA helicase II (Nucleolar RNA helicase Gu) (RH II/Gu) (DEAD-box protein 21) n=1 Tax=Canis lupus familiaris RepID=UPI00005A07BE Length = 784 Score = 114 bits (285), Expect = 5e-24 Identities = 57/137 (41%), Positives = 88/137 (64%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S +++ +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 448 TKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 507 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 508 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVP 567 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 568 SATEIIKASSKDAIRLL 584 [144][TOP] >UniRef100_UPI00004BFC84 Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21). n=1 Tax=Canis lupus familiaris RepID=UPI00004BFC84 Length = 785 Score = 114 bits (285), Expect = 5e-24 Identities = 57/137 (41%), Positives = 88/137 (64%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S +++ +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 449 TKKEAQELSQNVSIRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 508 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL+I P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 509 DLVIQSSPPKDVESYIHRSGRTGRAGRTGICICFYQHKEEYQLAQVEQKAGIKFKRIGVP 568 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 569 SATEIIKASSKDAIRLL 585 [145][TOP] >UniRef100_Q3JQZ9 ATP-dependent RNA helicase n=16 Tax=pseudomallei group RepID=Q3JQZ9_BURP1 Length = 529 Score = 114 bits (285), Expect = 5e-24 Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 329 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 388 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 389 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 441 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGGD 535 R P ++ E + DR N RG R GG+ +GGRR GG GG R GG Sbjct: 442 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG- 497 Query: 536 DWS 544 WS Sbjct: 498 -WS 499 [146][TOP] >UniRef100_B2SXM5 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2SXM5_BURPP Length = 542 Score = 114 bits (285), Expect = 5e-24 Identities = 77/195 (39%), Positives = 106/195 (54%), Gaps = 6/195 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 319 TATKMDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 378 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 379 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 431 Query: 359 RPPPMEDLPE--LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG---GDDWSSGGRR 523 R P ++ E P + S GR RG GG + GGRR G G SGG R Sbjct: 432 RTPLPVNVVEGFEPRKSAPSGNGRPGFGGRGRPGGG---NGGGRRFGSGSGKPAGSGGAR 488 Query: 524 PGGDDWSTEGRRSNG 568 G + S+ +S G Sbjct: 489 SGSGNGSSWAGKSAG 503 [147][TOP] >UniRef100_B9BY54 Dead/deah box helicase n=2 Tax=Burkholderia multivorans RepID=B9BY54_9BURK Length = 506 Score = 114 bits (285), Expect = 5e-24 Identities = 77/192 (40%), Positives = 103/192 (53%), Gaps = 1/192 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 303 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 362 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S Sbjct: 363 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIERFVRS----- 417 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 P P+ + R+ DR N RG GG +GGRR GG GG GG Sbjct: 418 -PLPVNVIEGFEPRKTPPR--NDRGNGRGRPGGG----NGGRRFGG---KPGGGGHGGHG 467 Query: 539 WSTEGRRSNGYS 574 S G G+S Sbjct: 468 RSYGGGNGGGWS 479 [148][TOP] >UniRef100_A9GLZ1 DEAD/DEAH box helicase-like protein n=1 Tax=Phaeobacter gallaeciensis BS107 RepID=A9GLZ1_9RHOB Length = 458 Score = 114 bits (285), Expect = 5e-24 Identities = 68/184 (36%), Positives = 100/184 (54%), Gaps = 8/184 (4%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +++ +L+++ ++ A+HG+ SQ QRER L F+ G +LVATDVA+RGLDIP Sbjct: 269 RTKHGMEKLMKTLSAAGFSAAAIHGNKSQGQRERALASFKSGEVKILVATDVAARGLDIP 328 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ + Sbjct: 329 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEMGELKAIQKTMNLNIPVAS 388 Query: 362 PPPMEDLPELPTRQVVSTLGR-----DRSNQRGYRTGGDDWSSGGRRSGGDDWSSGG--R 520 P E LP+ G+ R R+GG GG RSGG GG Sbjct: 389 GRPWEVLPDAKAPAGRRGGGKPGGGGKPGGHRRRRSGGGGGGQGGARSGGQGAGQGGGQG 448 Query: 521 RPGG 532 +PGG Sbjct: 449 KPGG 452 [149][TOP] >UniRef100_C4KPB8 Dead/deah box helicase n=7 Tax=Burkholderia pseudomallei RepID=C4KPB8_BURPS Length = 513 Score = 114 bits (285), Expect = 5e-24 Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 313 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 372 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 373 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 425 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGGD 535 R P ++ E + DR N RG R GG+ +GGRR GG GG R GG Sbjct: 426 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG- 481 Query: 536 DWS 544 WS Sbjct: 482 -WS 483 [150][TOP] >UniRef100_A4LCY1 DEAD/DEAH box helicase n=2 Tax=Burkholderia pseudomallei RepID=A4LCY1_BURPS Length = 513 Score = 114 bits (285), Expect = 5e-24 Identities = 76/183 (41%), Positives = 103/183 (56%), Gaps = 2/183 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 313 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 372 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 373 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 425 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGGD 535 R P ++ E + DR N RG R GG+ +GGRR GG GG R GG Sbjct: 426 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG- 481 Query: 536 DWS 544 WS Sbjct: 482 -WS 483 [151][TOP] >UniRef100_Q01AV7 Putative RNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01AV7_OSTTA Length = 693 Score = 114 bits (285), Expect = 5e-24 Identities = 63/122 (51%), Positives = 80/122 (65%), Gaps = 2/122 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSSI--ASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 TKRD E+ +L I +KALHGD+SQ QRE L FR+ +F VLVATDVA+RGLDI Sbjct: 343 TKRDCGELCDNLQKEIPKGAKALHGDVSQSQREVVLSLFREDKFQVLVATDVAARGLDIT 402 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 V+L+I E P ET++HRSGRTGRAG G +V + T + V ++ER G +F I Sbjct: 403 GVELVIQCEPPKDAETYIHRSGRTGRAGATGISVTLCTPRNEWAVPNIERKGGFKFIRIG 462 Query: 362 PP 367 PP Sbjct: 463 PP 464 [152][TOP] >UniRef100_A7QGV9 Chromosome chr16 scaffold_94, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QGV9_VITVI Length = 600 Score = 114 bits (285), Expect = 5e-24 Identities = 63/139 (45%), Positives = 86/139 (61%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK A E++ L + +ALHGDI Q QRE TL GFR G+F LVAT+VA+RGLDI Sbjct: 269 TETKDSASELAGLLPGA---RALHGDIQQSQREVTLSGFRSGKFMTLVATNVAARGLDIN 325 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V LII E P E ++HRSGRTGRAG G AV++F ++ + +ER+ G +FE + Sbjct: 326 DVQLIIQCEPPRDVEAYIHRSGRTGRAGNSGVAVMLFD-PRRSNISKIERESGVKFEHVS 384 Query: 362 PPPMEDLPELPTRQVVSTL 418 P D+ + + T+ Sbjct: 385 APQPADIAKSAGVEAAGTI 403 [153][TOP] >UniRef100_Q57Z07 Nucleolar RNA helicase II, putative n=2 Tax=Trypanosoma brucei RepID=Q57Z07_9TRYP Length = 632 Score = 114 bits (285), Expect = 5e-24 Identities = 57/141 (40%), Positives = 86/141 (60%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK+D ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P Sbjct: 306 TNTKKDCHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 364 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL+I P + F+HR+GRTGRAG++G V++ + V +ER +FE + Sbjct: 365 MVDLVIQCAPPTDIDAFIHRAGRTGRAGRKGVCVLLHQPKDEYVVERIERHAKIKFEVLP 424 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 P E++ + R + R Sbjct: 425 APTREEILKAVARDAAEDMAR 445 [154][TOP] >UniRef100_C0KIF3 Vasa n=1 Tax=Lytechinus variegatus RepID=C0KIF3_LYTVA Length = 679 Score = 114 bits (285), Expect = 5e-24 Identities = 71/190 (37%), Positives = 98/190 (51%), Gaps = 3/190 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR+AD ++ L+ S + ++HGD Q +RE L F+ GR VLVAT VA+RGLDIP Sbjct: 491 TKRNADFLATLLSQSDFHATSIHGDRQQQEREEALRDFKIGRAPVLVATSVAARGLDIPK 550 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR- 361 V +++Y+LP + +VHR GRTGR G G + + A ++DVG I+ Sbjct: 551 VKHVVNYDLPSDIDEYVHRIGRTGRVGNTGRSTSFYDA---------DKDVGIARALIKI 601 Query: 362 -PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 +D+P+ S +G N G G D GGR GG SS G GGD+ Sbjct: 602 LADACQDVPQFLEEAGDSAIGTYHGNAGGSFGGRDTRKFGGRGGGGGGGSSFGGNSGGDE 661 Query: 539 WSTEGRRSNG 568 W + G G Sbjct: 662 WGSGGGGDGG 671 [155][TOP] >UniRef100_UPI0001BBA5B7 II DNA/RNA helicase n=1 Tax=Acinetobacter lwoffii SH145 RepID=UPI0001BBA5B7 Length = 624 Score = 114 bits (284), Expect = 7e-24 Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 1/178 (0%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 T+ D D ++ L + ++ ALHG + Q R R L R+GR +LVATDVA+RGLD+P Sbjct: 263 TQEDTDMLAEELAEAGLSVVALHGAMPQTVRNRRLRSIREGRAKILVATDVAARGLDVPT 322 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 + +I++ LP E +VHR GRTGRAG+ G A+ + T ++ + +LE + +R Sbjct: 323 ISHVINFGLPMKNEDYVHRIGRTGRAGRTGKAITLATYRERGKIRALEDFLDARLNVSEI 382 Query: 365 PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 +E P P R GR R G R GG GGRR G+ S+ RR GGDD Sbjct: 383 EGLEPSPP-PARGSRDGAGRGRGRDGGRRDGGRGGFGGGRRFEGE--SNFKRREGGDD 437 [156][TOP] >UniRef100_Q8K2L4 Ddx21 protein (Fragment) n=2 Tax=Mus musculus RepID=Q8K2L4_MOUSE Length = 689 Score = 114 bits (284), Expect = 7e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 357 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 416 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 417 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 476 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 477 SATEIIKASSKDAIRLL 493 [157][TOP] >UniRef100_Q6PCP0 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Mus musculus RepID=Q6PCP0_MOUSE Length = 851 Score = 114 bits (284), Expect = 7e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 639 SATEIIKASSKDAIRLL 655 [158][TOP] >UniRef100_Q3ULC7 Putative uncharacterized protein n=1 Tax=Mus musculus RepID=Q3ULC7_MOUSE Length = 851 Score = 114 bits (284), Expect = 7e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 639 SATEIIKASSKDAIRLL 655 [159][TOP] >UniRef100_Q3TVJ3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 n=1 Tax=Mus musculus RepID=Q3TVJ3_MOUSE Length = 851 Score = 114 bits (284), Expect = 7e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 639 SATEIIKASSKDAIRLL 655 [160][TOP] >UniRef100_B1YSJ4 DEAD/DEAH box helicase domain protein n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1YSJ4_BURA4 Length = 512 Score = 114 bits (284), Expect = 7e-24 Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 9/198 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 309 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 368 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGS----- 343 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER V S Sbjct: 369 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIERFVRSPLPVN 428 Query: 344 ---RFEFIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514 FE + PP R GR + G GG S GG GG G Sbjct: 429 VIEGFEPRKAPPRNGSTGGRGRPGGGNGGRRFGGKPGGGHGGAGRSYGGGNGGGWSGKPG 488 Query: 515 GRRPGGDDWSTEGRRSNG 568 G R GG +G+RS+G Sbjct: 489 GSRDGGP--RRDGQRSSG 504 [161][TOP] >UniRef100_A3NAX9 DEAD/DEAH box helicase n=1 Tax=Burkholderia pseudomallei 668 RepID=A3NAX9_BURP6 Length = 514 Score = 114 bits (284), Expect = 7e-24 Identities = 77/184 (41%), Positives = 104/184 (56%), Gaps = 3/184 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 315 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 374 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 375 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 427 Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSS-GGRRPGG 532 R P P+ + R+ DR N RG R GG+ +GGRR GG GG R GG Sbjct: 428 RAPLPVNVVEGFEPRKAPPR--NDRGNGRG-RPGGN--GNGGRRFGGKPGGGHGGGRSGG 482 Query: 533 DDWS 544 WS Sbjct: 483 --WS 484 [162][TOP] >UniRef100_Q090J1 ATP-dependent RNA helicase DeaD n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q090J1_STIAU Length = 496 Score = 114 bits (284), Expect = 7e-24 Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 10/199 (5%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK A+ ++ L SS I+++A+HG+ SQ RER L F+ G VLVATD+A+RG+DI Sbjct: 253 TRTKHGANRVAKHLASSRISAEAIHGNKSQNARERALGAFKDGSCRVLVATDIAARGIDI 312 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +I+++LP+ PE++VHR GRTGRAG G A+ ++ + +ER + + + Sbjct: 313 EGITHVINFDLPNIPESYVHRIGRTGRAGAVGTALSFCDGEERAYLRDIERTIRRQVPVM 372 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG------GR 520 P P R R + G R +SGG+RS G+ G G Sbjct: 373 ADHPFRSGQSAPVPSEPGE-ARPRPSNEGRR-----HNSGGQRSQGESQGEGRHRRRRGG 426 Query: 521 RPGGDD---WSTEGRRSNG 568 RPGG S+EG R +G Sbjct: 427 RPGGQGASARSSEGHRGSG 445 [163][TOP] >UniRef100_C8NVE0 ATP-dependent RNA helicase DeaD (Fragment) n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NVE0_9CORY Length = 639 Score = 114 bits (284), Expect = 7e-24 Identities = 53/127 (41%), Positives = 91/127 (71%), Gaps = 1/127 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK++ +EI+ L + ++ A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+ Sbjct: 317 RTKQETEEIAEKLRARGFSAAAINGDIAQQQRERTVDMLRDGRLDILVATDVAARGLDVE 376 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + +++Y++P+ E++VHR GRTGRAG+ G A++ T ++R + S+E+ G++ E + Sbjct: 377 RISHVLNYDIPNDTESYVHRIGRTGRAGRTGEALLFVTPRERRMLRSIEKVTGAKIEEMD 436 Query: 362 PPPMEDL 382 P ++++ Sbjct: 437 LPTVDEV 443 [164][TOP] >UniRef100_C6R8G6 Cold-shock DEAD box protein A n=1 Tax=Corynebacterium tuberculostearicum SK141 RepID=C6R8G6_9CORY Length = 619 Score = 114 bits (284), Expect = 7e-24 Identities = 53/147 (36%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK + +E++ +L ++ A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+ Sbjct: 302 RTKHETEEVAETLRDRGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 361 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + ++++++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E + Sbjct: 362 RITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEMD 421 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442 P ++++ E + ++ N++ Sbjct: 422 LPSVDEVNEKRKEKFAQSITNSMDNKQ 448 [165][TOP] >UniRef100_C6R3C4 Cold-shock DEAD box protein A n=1 Tax=Rothia mucilaginosa ATCC 25296 RepID=C6R3C4_9MICC Length = 744 Score = 114 bits (284), Expect = 7e-24 Identities = 55/129 (42%), Positives = 86/129 (66%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK++ +E++ L + A+ A++GDI Q RERT+D R GR +LVATDVA+RGLD+ Sbjct: 319 RTKKETEEVADKLKARGFAAAAINGDIPQQLRERTVDALRDGRIDILVATDVAARGLDVE 378 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + L+++Y++P E++VHR GRTGRAG+EGAA++ T +K + +E+ + E + Sbjct: 379 RISLVVNYDIPHDTESYVHRIGRTGRAGREGAAILFVTPREKYMLRQIEKATRQKVEPMH 438 Query: 362 PPPMEDLPE 388 P E + E Sbjct: 439 MPTAEAVNE 447 [166][TOP] >UniRef100_C8WF18 DEAD/DEAH box helicase domain protein n=3 Tax=Zymomonas mobilis RepID=C8WF18_ZYMMO Length = 458 Score = 114 bits (284), Expect = 7e-24 Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 12/187 (6%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L ++ + + A+HG+ SQ QRER L+ FR GR +LVATD+A+RG+D+ Sbjct: 257 TRTKHGADRVVRHLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKILVATDIAARGIDV 316 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P V + +YELP+ E +VHR GRT RAG++G A+ ++ + S+ER + + + Sbjct: 317 PGVSHVFNYELPNVAEQYVHRIGRTARAGRDGQAISFIANDERSYLRSIERLTRVKLQIL 376 Query: 359 RPPP---MEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG-------GDD-W 505 P ME EL RD + RG R GG GG + G GDD Sbjct: 377 PLPENFVME--KELLPHPAPMRPERDGRDGRGGRGGGRGRFGGGAKPGFNHSHGKGDDRG 434 Query: 506 SSGGRRP 526 GG RP Sbjct: 435 DRGGERP 441 [167][TOP] >UniRef100_C2BQP3 DEAD-box helicase n=1 Tax=Corynebacterium pseudogenitalium ATCC 33035 RepID=C2BQP3_9CORY Length = 619 Score = 114 bits (284), Expect = 7e-24 Identities = 53/147 (36%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK + +E++ +L ++ A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+ Sbjct: 302 RTKHETEEVAETLRDRGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 361 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + ++++++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E + Sbjct: 362 RITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEMD 421 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442 P ++++ E + ++ N++ Sbjct: 422 LPSVDEVNEKRKEKFAQSITNSMDNKQ 448 [168][TOP] >UniRef100_A4I7K4 ATP-dependent RNA helicase, putative n=1 Tax=Leishmania infantum RepID=A4I7K4_LEIIN Length = 614 Score = 114 bits (284), Expect = 7e-24 Identities = 77/191 (40%), Positives = 95/191 (49%), Gaps = 4/191 (2%) Frame = +2 Query: 11 KRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 KRDAD + Y S I ++HGD Q +RE LD F+ G VLVATDVASRGLDIPNV Sbjct: 397 KRDADYLERYLRQSRIPCSSIHGDRVQREREEALDIFKSGVCRVLVATDVASRGLDIPNV 456 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 +++ Y+LP + +VHR GRTGRAGK G A+ F + V L +R Sbjct: 457 AVVVQYDLPSNIDDYVHRIGRTGRAGKRGTAISFFNDKNRNIVDDL-------IPLLRET 509 Query: 368 PMEDLPE---LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 LPE L + V R R + G+R+GG GG GG G R GG Sbjct: 510 NQTVLPEVQALAKKPNVQNQPRGR-GRGGFRSGGFGGGFGGGYGGGYGGRGGYRGGGGFG 568 Query: 539 WSTEGRRSNGY 571 G GY Sbjct: 569 GGYGGGYGGGY 579 [169][TOP] >UniRef100_Q3B8Q1 Nucleolar RNA helicase 2 n=1 Tax=Rattus norvegicus RepID=DDX21_RAT Length = 782 Score = 114 bits (284), Expect = 7e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 443 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 502 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 503 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVP 562 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 563 SATEIIKASSKDAIRLL 579 [170][TOP] >UniRef100_Q9JIK5 Nucleolar RNA helicase 2 n=1 Tax=Mus musculus RepID=DDX21_MOUSE Length = 851 Score = 114 bits (284), Expect = 7e-24 Identities = 57/137 (41%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA E+S + +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 519 TKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVP 638 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 639 SATEIIKASSKDAIRLL 655 [171][TOP] >UniRef100_UPI000196952D hypothetical protein BACCELL_03748 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI000196952D Length = 478 Score = 113 bits (283), Expect = 9e-24 Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 3/138 (2%) Frame = +2 Query: 2 TRTKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 +RTK AD I+ Y I +++HGD SQ R+R L F++GR V++ATD+A+RG+DI Sbjct: 255 SRTKHGADNIARYLSRRGITCESIHGDKSQNSRQRALSNFKEGRSNVIIATDIAARGIDI 314 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 +DL+++Y+LPD PET+VHR GRTGRAG EG A+ + + + +E+ G + E Sbjct: 315 KGLDLVLNYDLPDVPETYVHRIGRTGRAGCEGRAIAFCSGEEVPMLREIEKLTGIKLEQR 374 Query: 359 RP--PPMEDLPELPTRQV 406 + PP+E+ P V Sbjct: 375 KHDLPPLEETKTAPVVNV 392 [172][TOP] >UniRef100_Q82TR7 Putative ATP-dependent RNA helicase protein n=1 Tax=Nitrosomonas europaea RepID=Q82TR7_NITEU Length = 457 Score = 113 bits (283), Expect = 9e-24 Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 1/177 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKRDAD ++ +L+S + A+HGD++Q +R RTL G RQGR +LVATDVA+RG+DI Sbjct: 252 TATKRDADSLADNLSSQGHKAAAMHGDMTQRERTRTLTGLRQGRLKILVATDVAARGIDI 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 ++ +I+++LP E +VHR GRTGRAG G AV + + +ER G+RFEF Sbjct: 312 ADITHVINFDLPKFAEDYVHRIGRTGRAGASGIAVSFASGKDVAHLKRIERFTGNRFEFH 371 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529 P +E P R GR ++ G R + RRS D+ ++ PG Sbjct: 372 VIPGIE--PRTKPR-----FGRS-DDKPGRRPSSSAAAHKTRRSWSDNPNTRTASPG 420 [173][TOP] >UniRef100_Q3SF48 DEAD/DEAH box helicase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SF48_THIDA Length = 533 Score = 113 bits (283), Expect = 9e-24 Identities = 79/190 (41%), Positives = 101/190 (53%), Gaps = 2/190 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR +EIS L S AS ALHGD+ Q QR R L R+GR VLVATDVA+RG+D+ + Sbjct: 254 TKRSTEEISDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRVLVATDVAARGIDVAS 313 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 + +I+++LP E +VHR GRTGRAG+ G AV + V ++ER G+R E Sbjct: 314 ISHVINFDLPRQAEDYVHRIGRTGRAGRTGIAVSFAGMREGGLVKNIERYTGNRIEVHTL 373 Query: 365 PPMEDLPELPT-RQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 P +E PT R G R G R G + S G R + S G RP GD Sbjct: 374 PGLE-----PTQRPSTGRPGNGRPRGNGPRGGYEKRSFGDR----SEPRSYGDRPRGD-- 422 Query: 542 STEGRRSNGY 571 + R GY Sbjct: 423 -SRDNRDRGY 431 [174][TOP] >UniRef100_Q24W49 Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24W49_DESHY Length = 537 Score = 113 bits (283), Expect = 9e-24 Identities = 62/153 (40%), Positives = 97/153 (63%), Gaps = 3/153 (1%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKR DE+ +L + + ALHGD+SQ QR+R + FR G+ +LVATDVA+RGLDI Sbjct: 261 RTKRGVDELVAALEARGYFADALHGDLSQQQRDRVMKKFRDGKVELLVATDVAARGLDID 320 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NV +I++++P PE++VHR GRTGRAG++G A+ + ++ + R + +ER + +R Sbjct: 321 NVTHVINFDIPQDPESYVHRIGRTGRAGRKGQAITLVSSREYRQLRLIERLIKTRIVRKE 380 Query: 362 PPPMEDLPELPTRQVVSTLGR--DRSNQRGYRT 454 P + D+ E + + L + RS+ YR+ Sbjct: 381 LPTLADVSERQAENLKNQLVKILQRSHLGTYRS 413 [175][TOP] >UniRef100_Q0C354 ATP-dependent RNA helicase RhlE n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C354_HYPNA Length = 464 Score = 113 bits (283), Expect = 9e-24 Identities = 67/178 (37%), Positives = 97/178 (54%), Gaps = 1/178 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L + I S A+HG+ SQ QRE+ L+ F+ GR +LVATD+A+RG+ + Sbjct: 257 TRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARGIHV 316 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +I+Y+LPD PE FVHR GRT RAG G A+ + ++ T+ ++E+ G + Sbjct: 317 DALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKLTGLKL--- 373 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 P LP+ P R+ +G R+G G R GG S G + GG Sbjct: 374 -APNGVSLPDEPLRK--------PGKPQGNRSGNGGGRGGARSGGGYQGQSSGSQSGG 422 [176][TOP] >UniRef100_B1ZB68 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZB68_METPB Length = 506 Score = 113 bits (283), Expect = 9e-24 Identities = 71/198 (35%), Positives = 99/198 (50%), Gaps = 9/198 (4%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L + I A+HG+ SQ QRER L FR G VLVATD+A+RG+D+ Sbjct: 252 TRTKHGADRVVRGLDKAGIVGAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRF--- 349 V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ ++ +ER + Sbjct: 312 EGVTHVVNYDLPNVPESYVHRIGRTARAGAEGMAISFCNDEERAYLLDIERTTRQKVPVA 371 Query: 350 ---EFIRPPPMEDLPELPTRQV--VSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG 514 E PP ++ E + + R QR R GG G R Sbjct: 372 GFPEGFVPPSRQEAQETAAEEARRPPRQPQGRPGQRQGRPGGGRGQGGEGRGEPRTHEGR 431 Query: 515 GRRPGGDDWSTEGRRSNG 568 G RPGG + +RS G Sbjct: 432 GGRPGGQPGHRQDQRSAG 449 [177][TOP] >UniRef100_A6SX95 ATP-dependent RNA helicase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SX95_JANMA Length = 466 Score = 113 bits (283), Expect = 9e-24 Identities = 57/111 (51%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKRDAD I+ L + A+ ALHGD+ Q R RTLDG R+G+ VLVATDVA+RG+D+ Sbjct: 275 TATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGLRRGQIRVLVATDVAARGIDV 334 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER 331 P + +++Y+LP PE +VHR GRTGRAG+ G AV + ++ V +ER Sbjct: 335 PGITHVVNYDLPKFPEDYVHRIGRTGRAGRNGIAVSLVNHAESMNVKRIER 385 [178][TOP] >UniRef100_A4G7H2 Putative ATP-dependent RNA helicase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G7H2_HERAR Length = 468 Score = 113 bits (283), Expect = 9e-24 Identities = 75/191 (39%), Positives = 101/191 (52%), Gaps = 13/191 (6%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKRDAD I+ L + A+ ALHGD+ Q R RTLDG R+G+ VLVATDVA+RG+D+ Sbjct: 277 TATKRDADTIADRLNIAGFAAAALHGDMHQGARNRTLDGLRRGQIRVLVATDVAARGIDV 336 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVG-----S 343 P + + +Y+LP PE +VHR GRTGRAG+ G AV + ++ V +ER + S Sbjct: 337 PAITHVFNYDLPKFPEDYVHRIGRTGRAGRNGIAVSLVNHAEGMNVKRIERFIKQLIPVS 396 Query: 344 RFEFIRPPPMEDLPELPTRQVVSTLGRDRSN-----QRGYRTGGDDWSSGGRRSGGDDWS 508 E P P + G +R N QR + + GG G Sbjct: 397 VIEGFEPKRTASAPRSNHKPGGWKPGDNRGNAAKPGQRTFSKPNATRNEGGYNKGPRTSD 456 Query: 509 SGG--RRPGGD 535 +GG RRP G+ Sbjct: 457 AGGATRRPFGE 467 [179][TOP] >UniRef100_C6MQU4 DEAD/DEAH box helicase domain protein n=1 Tax=Geobacter sp. M18 RepID=C6MQU4_9DELT Length = 467 Score = 113 bits (283), Expect = 9e-24 Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 32/221 (14%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T+TK A + L S + +L G++SQ +R+ LDGFR G + ++VATD+A+RG+D+ Sbjct: 246 TKTKHRAKRVGEQLEKSGYKATSLQGNLSQNRRQAALDGFRDGTYQIMVATDIAARGIDV 305 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSR---- 346 + +I+Y++PD PE + HR GRTGRA K G A M T + V S+ER +G++ Sbjct: 306 SLISHVINYDIPDTPEAYTHRIGRTGRAAKTGDAFTMVTGEDEAMVRSIERVLGAKIERR 365 Query: 347 ----FEFIRPPPMED-----LPELPTRQ------------VVSTLGR-----DRSNQRGY 448 F++ P P +D P P R+ GR +R+N Sbjct: 366 RLEGFDYAVPAPQKDAEFARAPREPQRRKPAAGKPAEAKAAKPAAGRPAQPGNRNNSGAA 425 Query: 449 RTGGDDWSSG-GRRSGGDDWSSGGRRPGGDDWSTEGRRSNG 568 R G G G GG+RPGG+ S+ R +G Sbjct: 426 RHAGPGGKGAPGGHQAGHGAGEGGQRPGGNRPSSHAARRSG 466 [180][TOP] >UniRef100_C2CL09 Superfamily II helicase n=1 Tax=Corynebacterium striatum ATCC 6940 RepID=C2CL09_CORST Length = 678 Score = 113 bits (283), Expect = 9e-24 Identities = 55/147 (37%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK + +E++ SL + + A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+ Sbjct: 301 RTKHETEEVADSLRDAGYNAAAINGDIAQQQRERTVDQLKDGRLDILVATDVAARGLDVD 360 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + +++Y++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E + Sbjct: 361 RITHVVNYDIPNDTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNARLEEMD 420 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442 P + + E + ++ +G +++ Sbjct: 421 LPSADAVNEKRKEKFLAKIGESLGDKQ 447 [181][TOP] >UniRef100_C0WFL7 DEAD-box helicase n=1 Tax=Corynebacterium accolens ATCC 49725 RepID=C0WFL7_9CORY Length = 623 Score = 113 bits (283), Expect = 9e-24 Identities = 53/147 (36%), Positives = 96/147 (65%), Gaps = 1/147 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK + +E++ +L ++ A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+ Sbjct: 302 RTKHETEEVAEALRDRGYSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 361 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + ++++++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER +R E + Sbjct: 362 RITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEMD 421 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442 P ++++ E + + + N++ Sbjct: 422 LPSVDEVNEKRKEKFAQAITQSMDNKQ 448 [182][TOP] >UniRef100_A9EMW5 DEAD/DEAH box helicase-like protein n=1 Tax=Phaeobacter gallaeciensis 2.10 RepID=A9EMW5_9RHOB Length = 458 Score = 113 bits (283), Expect = 9e-24 Identities = 67/177 (37%), Positives = 98/177 (55%), Gaps = 1/177 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +++ +L+++ ++ A+HG+ SQ QRER L F+ G +LVATDVA+RGLDIP Sbjct: 269 RTKHGMEKLMKTLSAAGFSAAAIHGNKSQGQRERALASFKSGEVKILVATDVAARGLDIP 328 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ + Sbjct: 329 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEMGELKAIQKTMNLNIPVAS 388 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 P E LP+ + GR + G GG RRSGG GG R GG Sbjct: 389 GRPWEVLPD-----AKAPAGRRGGGKPG--GGGKPGGHRRRRSGGGGGGQGGARSGG 438 [183][TOP] >UniRef100_A9E5K2 Putative ATP-dependent RNA helicase, putative n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E5K2_9RHOB Length = 438 Score = 113 bits (283), Expect = 9e-24 Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 1/189 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK ++++ +L + + ++HG+ SQ QR+R + GF+ G TVLVATDVA+RGLDIP Sbjct: 253 RTKHGSEKLMKTLVKAGFDAASIHGNKSQGQRDRAIAGFKGGDITVLVATDVAARGLDIP 312 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + ++ELP+ P+ +VHR GRT RAGK+GAAV + + ++++ +G Sbjct: 313 DVKHVYNFELPNVPDNYVHRIGRTARAGKDGAAVAFCAPDEMGELKAIQKTMGISIPVAS 372 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDW 541 P E + E P++ + R RG R GG GGR GG GG G Sbjct: 373 GRPWEVIDE-PSKP------KGRGRGRGGRPGG----GGGRPGGGG--GGGGEAAGKPSG 419 Query: 542 STEGRRSNG 568 RRS G Sbjct: 420 GRRRRRSGG 428 [184][TOP] >UniRef100_B9ICY7 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ICY7_POPTR Length = 657 Score = 113 bits (283), Expect = 9e-24 Identities = 61/139 (43%), Positives = 88/139 (63%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T + A+E+S L + +ALHG+I Q QRE TL GFR G+F LVAT+VA+RGLDI Sbjct: 340 TEKRESANELSGLLPGA---RALHGEIQQSQREVTLSGFRSGKFLTLVATNVAARGLDIN 396 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V LII E P+ E ++HRSGRTGRAG G AV+++ ++ + ++R+ G +FE I Sbjct: 397 DVQLIIQCEPPNDVEAYIHRSGRTGRAGNSGVAVMLYD-PRRSNISKIQRESGVKFEHIT 455 Query: 362 PPPMEDLPELPTRQVVSTL 418 P ED+ + + T+ Sbjct: 456 APKAEDIAKAVGVEAAETI 474 [185][TOP] >UniRef100_A4FV23 DDX21 protein n=1 Tax=Bos taurus RepID=A4FV23_BOVIN Length = 784 Score = 113 bits (283), Expect = 9e-24 Identities = 56/137 (40%), Positives = 87/137 (63%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A E+S ++ +++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 448 TKKEAQELSQNVAVRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAARGLDIPEV 507 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E+ G +F+ I P Sbjct: 508 DLVVQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEYQLAQVEQKAGIKFKRIGVP 567 Query: 368 PMEDLPELPTRQVVSTL 418 ++ + ++ + L Sbjct: 568 SPTEIIKASSKDAIRLL 584 [186][TOP] >UniRef100_A9A6H8 DEAD/DEAH box helicase domain protein n=1 Tax=Methanococcus maripaludis C6 RepID=A9A6H8_METM6 Length = 546 Score = 113 bits (283), Expect = 9e-24 Identities = 58/137 (42%), Positives = 89/137 (64%), Gaps = 1/137 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 +TK D DEIS LT A++ LHGD++Q QRE+TL+ F+ + VLVATDVA+RG+DI Sbjct: 249 KTKADVDEISSRLTEKGYAAEGLHGDMTQAQREKTLEKFKARKINVLVATDVAARGIDIN 308 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 ++ +++Y++P PE++VHR GRTGRAGK+G AV S+ R +++ + Sbjct: 309 DLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVEPSEFRKFKYIQKIANTEIRKEE 368 Query: 362 PPPMEDLPELPTRQVVS 412 P ++D+ R++VS Sbjct: 369 VPDVKDIIGAKKRKIVS 385 [187][TOP] >UniRef100_Q39R66 DEAD/DEAH box helicase-like n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39R66_GEOMG Length = 452 Score = 113 bits (282), Expect = 1e-23 Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKRDA+ ++ L S ++ ALHGD+ Q R RT+ +QGR +LVATDVA+RGLD+ Sbjct: 253 TKRDAENMAIELRSQGHSAAALHGDMPQSARNRTIAAMKQGRIRLLVATDVAARGLDVSG 312 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 + +I+++LP E +VHR GRTGRAG G A+ + ++ + +ER +G Sbjct: 313 ISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVSYLARIERYIGQTL----- 367 Query: 365 PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDWS 544 P +P L R+ + + R ++ G TGG S G R D + G RPG S Sbjct: 368 -PEHQIPGLEPRRPLHRVSTGRGSRPGNSTGGPRKSYGNR-----DAAKTGGRPGNAKRS 421 Query: 545 TEGRR--SNG 568 G+ SNG Sbjct: 422 PWGKHTTSNG 431 [188][TOP] >UniRef100_C5B2X3 RNA helicase n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B2X3_METEA Length = 519 Score = 113 bits (282), Expect = 1e-23 Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 13/188 (6%) Frame = +2 Query: 11 KRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 KRD ++ SLTS + ALHGD+ Q R LDGFR G +LVA+DVA+RGLDIP V Sbjct: 255 KRDVAQLQRSLTSHGFNAAALHGDMDQRARMAALDGFRSGEVPLLVASDVAARGLDIPAV 314 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 + ++++P PE +VHR GRTGRAG+ G A + + S +R++ ++E +G ++ Sbjct: 315 SHVFNFDVPHHPEDYVHRIGRTGRAGRSGQAFTLASRSDERSLSAIESLIGQPIAWLD-- 372 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRS-----------GGDDWSS 511 DL + R R ++R T GG++ SGGR + ++ S Sbjct: 373 --GDLASVSDEVEGDEPRRRRGSRRAKETKGGEETKSGGRSTERSAAPASESPRSENRSR 430 Query: 512 GGRRPGGD 535 GGRRP + Sbjct: 431 GGRRPAAE 438 [189][TOP] >UniRef100_C4LJP9 ATP-dependent RNA helicase n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LJP9_CORK4 Length = 823 Score = 113 bits (282), Expect = 1e-23 Identities = 53/129 (41%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK++ +E++ L + ++ A++GD++Q QRERT+D R GR +LVATDVA+RGLD+ Sbjct: 401 RTKQNTEELAEKLRARGFSAAAINGDMAQNQRERTVDQLRDGRLDILVATDVAARGLDVE 460 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + +++Y++P E++VHR GRTGRAG+ G A++ T ++R + S+ER S E ++ Sbjct: 461 RISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAILFVTPRERRLLRSIERATKSSIEEMQ 520 Query: 362 PPPMEDLPE 388 P ++++ E Sbjct: 521 LPTVDEVNE 529 [190][TOP] >UniRef100_B8G080 DEAD/DEAH box helicase domain protein n=1 Tax=Desulfitobacterium hafniense DCB-2 RepID=B8G080_DESHD Length = 530 Score = 113 bits (282), Expect = 1e-23 Identities = 62/153 (40%), Positives = 97/153 (63%), Gaps = 3/153 (1%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKR DE+ +L + + ALHGD+SQ QR+R + FR G+ +LVATDVA+RGLDI Sbjct: 254 RTKRGVDELVAALEARGYFADALHGDLSQQQRDRVMKKFRDGKVELLVATDVAARGLDID 313 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NV +I++++P PE++VHR GRTGRAG++G A+ + ++ + R + +ER + +R Sbjct: 314 NVTHVINFDIPQDPESYVHRIGRTGRAGRKGQAITLVSSREYRQLRLIERLIKTRIIRKE 373 Query: 362 PPPMEDLPELPTRQVVSTLGR--DRSNQRGYRT 454 P + D+ E + + L + RS+ YR+ Sbjct: 374 LPTLADVSERQAENLKNQLVKILQRSHLGTYRS 406 [191][TOP] >UniRef100_B7KPP7 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KPP7_METC4 Length = 510 Score = 113 bits (282), Expect = 1e-23 Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L +S+ S A+HG+ SQ QRER L FR G VLVATD+A+RG+D+ Sbjct: 252 TRTKHGADRVVRGLDKASVVSAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER------DVG 340 V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ + +ER VG Sbjct: 312 DGVTHVVNYDLPNVPESYVHRIGRTARAGAEGQAISFCNDEERAYLRDIERTTRQKIPVG 371 Query: 341 SRFEFIRPPPMEDLPE-------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD 499 E PP ++ + P RQ + R QR R GG G R Sbjct: 372 GFPEGFVPPSRQEAQDNAAEEARRPPRQ-----PQGRPGQRQGRPGGGRGQGGEGRGEPR 426 Query: 500 DWSSGGRRPGGDDWSTEGRRSNG 568 + G RPGG + +R+ G Sbjct: 427 AHEARGGRPGGQPGHRQDQRAAG 449 [192][TOP] >UniRef100_A9W8K6 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W8K6_METEP Length = 519 Score = 113 bits (282), Expect = 1e-23 Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 13/188 (6%) Frame = +2 Query: 11 KRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 KRD ++ SLTS + ALHGD+ Q R LDGFR G +LVA+DVA+RGLDIP V Sbjct: 255 KRDVAQLQRSLTSHGFNAAALHGDMDQRARMAALDGFRSGEVPLLVASDVAARGLDIPAV 314 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 + ++++P PE +VHR GRTGRAG+ G A + + S +R++ ++E +G ++ Sbjct: 315 SHVFNFDVPHHPEDYVHRIGRTGRAGRSGQAFTLASRSDERSLSAIESLIGQPIAWLD-- 372 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRS-----------GGDDWSS 511 DL + R R ++R T GG++ SGGR + ++ S Sbjct: 373 --GDLASVSDEVEGDEPRRRRGSRRAKETKGGEETKSGGRSTERSAAPASESPRSENRSR 430 Query: 512 GGRRPGGD 535 GGRRP + Sbjct: 431 GGRRPAAE 438 [193][TOP] >UniRef100_A9W5V9 DEAD/DEAH box helicase domain protein n=2 Tax=Methylobacterium extorquens RepID=A9W5V9_METEP Length = 510 Score = 113 bits (282), Expect = 1e-23 Identities = 75/203 (36%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L +S+ S A+HG+ SQ QRER L FR G VLVATD+A+RG+D+ Sbjct: 252 TRTKHGADRVVRGLDKASVVSAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER------DVG 340 V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ + +ER VG Sbjct: 312 DGVTHVVNYDLPNVPESYVHRIGRTARAGAEGQAISFCNDEERAYLRDIERTTRQKIPVG 371 Query: 341 SRFEFIRPPPMEDLPE-------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD 499 E PP ++ + P RQ + R QR R GG G R Sbjct: 372 GFPEGFVPPTRQEAQDNAAEEARRPPRQ-----PQGRPGQRQGRPGGGRGQGGEGRGEPR 426 Query: 500 DWSSGGRRPGGDDWSTEGRRSNG 568 + G RPGG + +R+ G Sbjct: 427 AHEARGGRPGGQPGHRQDQRAAG 449 [194][TOP] >UniRef100_C7N178 DNA/RNA helicase, superfamily II n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N178_SLAHD Length = 657 Score = 113 bits (282), Expect = 1e-23 Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 19/206 (9%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T+TK AD + L I ++A+H D SQ QR+R L+ FR+G+ V+VATDV +RG+D+ Sbjct: 254 TKTKGGADNCTRRLCKIGIGAEAIHADRSQAQRQRALERFREGKTHVIVATDVLARGIDV 313 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P VD +++Y+LP PE +VHR GRTGRAG G AV T K + S+++ +G + + Sbjct: 314 PEVDYVVNYDLPMMPEDYVHRIGRTGRAGVAGYAVSFVTPDTKNLLRSIQKFIGEDIQVM 373 Query: 359 RPPPMEDLPE--------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSG------- 493 ED E + + + +DR + G + G GG++ G Sbjct: 374 EFKAGEDAYEPVGKDHALAASEEEHAPKRKDRDKKNGKKGGRKHDDRGGKKGGRKHDDRE 433 Query: 494 --GDDWSSGGRRP-GGDDWSTEGRRS 562 DD GG++ G++ + E +R+ Sbjct: 434 GARDDAPKGGKKKRKGNETNAEAKRA 459 [195][TOP] >UniRef100_UPI00017B33D3 UPI00017B33D3 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B33D3 Length = 605 Score = 112 bits (281), Expect = 2e-23 Identities = 56/137 (40%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A+E++ + + +++LHGDI Q QRE TL GFR+G F VLVAT+VA+RGLDIP V Sbjct: 293 TKKEANELALNASIKQNAQSLHGDIPQKQRETTLKGFRKGSFEVLVATNVAARGLDIPEV 352 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P Sbjct: 353 DLVVQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYVENKAGITFRRVGVP 412 Query: 368 PMEDLPELPTRQVVSTL 418 D+ + ++ V L Sbjct: 413 TANDIIKSSSKDAVRFL 429 [196][TOP] >UniRef100_Q4S0Z1 Chromosome 5 SCAF14773, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S0Z1_TETNG Length = 727 Score = 112 bits (281), Expect = 2e-23 Identities = 56/137 (40%), Positives = 86/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A+E++ + + +++LHGDI Q QRE TL GFR+G F VLVAT+VA+RGLDIP V Sbjct: 415 TKKEANELALNASIKQNAQSLHGDIPQKQRETTLKGFRKGSFEVLVATNVAARGLDIPEV 474 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F + P Sbjct: 475 DLVVQCSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYVENKAGITFRRVGVP 534 Query: 368 PMEDLPELPTRQVVSTL 418 D+ + ++ V L Sbjct: 535 TANDIIKSSSKDAVRFL 551 [197][TOP] >UniRef100_Q5FUF7 ATP-dependent RNA helicase n=1 Tax=Gluconobacter oxydans RepID=Q5FUF7_GLUOX Length = 431 Score = 112 bits (281), Expect = 2e-23 Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T K +A++++ L + I ++A+HG+ SQ RER + GFR G LVATD+A+RG+D+ Sbjct: 252 TLMKHEANKVAEFLNKNGIRAEAIHGNKSQGARERAMAGFRSGAIKALVATDIAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 V + +Y+LP+ PE++VHR GRT RAG+EG AV + A Q+ + +E+ +G + Sbjct: 312 DEVSHVFNYDLPNVPESYVHRIGRTARAGREGCAVSLCDAEQRAWLKDIEKKIGKPIPVV 371 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 P + Q LG GG GGRR G SGG RPGG Sbjct: 372 TDHPFHSEEARLSTQRPPVLG-----------GGRGGGGGGRRRSGP--PSGG-RPGGGR 417 Query: 539 WSTEGR 556 GR Sbjct: 418 GGAPGR 423 [198][TOP] >UniRef100_Q473Y5 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal n=1 Tax=Ralstonia eutropha JMP134 RepID=Q473Y5_RALEJ Length = 632 Score = 112 bits (281), Expect = 2e-23 Identities = 73/190 (38%), Positives = 104/190 (54%), Gaps = 1/190 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKRDAD ++ L+ + A+ ALHGD++Q R RTL R+G VLVATDVA+RG+D+ Sbjct: 319 TATKRDADSLAERLSDTGFAAGALHGDMTQGARNRTLTALRRGNLRVLVATDVAARGIDV 378 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P++ +++++LP E +VHR GRTGRAG+ G A+ + + +ER +R + Sbjct: 379 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGVAINLVNHNDTFQWKRIERFTNNRIDAS 438 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 +E R R N GYR GG+ S G R+ GD G R G+ Sbjct: 439 VIEGLEPRRSPKPRSNFGGKPGGRGNGGGYR-GGE--RSFGDRNFGDRKFGGESRGFGNR 495 Query: 539 WSTEGRRSNG 568 + EG RS G Sbjct: 496 GNQEGGRSFG 505 [199][TOP] >UniRef100_Q1GI56 DEAD/DEAH box helicase-like protein n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GI56_SILST Length = 445 Score = 112 bits (281), Expect = 2e-23 Identities = 69/177 (38%), Positives = 95/177 (53%), Gaps = 1/177 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +++ L + + A+HG+ SQ QRER L F+ G TVLVATDVA+RGLDIP Sbjct: 253 RTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLVATDVAARGLDIP 312 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAGK+G AV + + ++++ +G Sbjct: 313 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAIQKTMGITIPVAS 372 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 E+LP+ + R RG GG GGR GG G RR GG Sbjct: 373 GRAWEELPDPAAKPA-------RGGGRGRPGGG----GGGRGKGGGKPGGGRRRFGG 418 [200][TOP] >UniRef100_C6BF08 DEAD/DEAH box helicase domain protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BF08_RALP1 Length = 627 Score = 112 bits (281), Expect = 2e-23 Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 1/192 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKRDAD ++ LT ++ ALHGD+ Q R RTL R+G+ VLVATDVA+RG+D+ Sbjct: 303 TATKRDADSLAERLTEHGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDV 362 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P++ +++++LP E +VHR GRTGRAG+ G A+ + + +ER V R + Sbjct: 363 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHNDTFQWRRIERFVDRRIDAS 422 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 +E R G DR RG GG+ G+R G G GG+ Sbjct: 423 VVEGLEPKRSAKPRTGGPRAGGDRGGYRG--NGGNGGGYRGQREGYGARQGGN---GGNS 477 Query: 539 WSTEGRRSNGYS 574 + EGR ++ Sbjct: 478 GNNEGRFQRSFA 489 [201][TOP] >UniRef100_C1AE44 ATP-dependent DEAD-box RNA helicase DeaD n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AE44_GEMAT Length = 594 Score = 112 bits (281), Expect = 2e-23 Identities = 54/127 (42%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RT+ + DE+S +LT+ + ++ALHG +SQ QR+R + FR + +L+ATDVA+RGLD+ Sbjct: 267 RTRTEVDELSETLTARGLRAEALHGGLSQDQRDRVMQKFRARKVDLLIATDVAARGLDVK 326 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V ++++++P ET+VHR GRTGRAG+EG AV + R + ++ER G + E + Sbjct: 327 HVSHVVNFDVPVDAETYVHRIGRTGRAGREGVAVTFAEPRENRLLRNIERQTGQKIEIAQ 386 Query: 362 PPPMEDL 382 P + DL Sbjct: 387 VPTVADL 393 [202][TOP] >UniRef100_B9M4E4 DEAD/DEAH box helicase domain protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M4E4_GEOSF Length = 451 Score = 112 bits (281), Expect = 2e-23 Identities = 67/172 (38%), Positives = 95/172 (55%), Gaps = 2/172 (1%) Frame = +2 Query: 8 TKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKRDAD ++ L A+ ALHGD+SQ R +T+ R+G+ +LVATDVA+RGLD+ Sbjct: 253 TKRDADLLARDLHAQGHAAAALHGDMSQNARNKTIHNMRRGKIRLLVATDVAARGLDVTG 312 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 + +I+++LP E +VHR GRTGRAG G A+ + + + +ER G Sbjct: 313 ISHVINFDLPKFAEDYVHRIGRTGRAGATGIAISFASLNDLNYLDRIERYTGQTL----- 367 Query: 365 PPMEDLPEL-PTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGG 517 PM +P L PTR + + +Q G G ++ GRR G DD GG Sbjct: 368 -PMHVIPGLEPTRPLRRLSTSGKRSQPGNGRGKTPYAGNGRRQGKDDTKGGG 418 [203][TOP] >UniRef100_B7L2T5 DEAD/DEAH box helicase domain protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L2T5_METC4 Length = 519 Score = 112 bits (281), Expect = 2e-23 Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 13/188 (6%) Frame = +2 Query: 11 KRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 KRD ++ SLTS + ALHGD+ Q R LDGFR G +LVA+DVA+RGLDIP V Sbjct: 255 KRDVAQLQRSLTSHGFNAAALHGDMDQRARMAALDGFRSGEVPLLVASDVAARGLDIPAV 314 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 + ++++P PE +VHR GRTGRAG+ G A + + S +R++ ++E +G ++ Sbjct: 315 SHVFNFDVPHHPEDYVHRIGRTGRAGRSGQAFTLASRSDERSLSAIESLIGQPIAWLD-- 372 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRT-GGDDWSSGGRRS-----------GGDDWSS 511 DL + R R ++R T GG++ SGGR + ++ S Sbjct: 373 --GDLASVSDEVEGDEPRRRRGSRRAKETKGGEEAKSGGRSTERSAAPSSESPRSENRSR 430 Query: 512 GGRRPGGD 535 GGRRP + Sbjct: 431 GGRRPAAE 438 [204][TOP] >UniRef100_B2U8M9 DEAD/DEAH box helicase domain protein n=1 Tax=Ralstonia pickettii 12J RepID=B2U8M9_RALPJ Length = 627 Score = 112 bits (281), Expect = 2e-23 Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 1/192 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKRDAD ++ LT ++ ALHGD+ Q R RTL R+G+ VLVATDVA+RG+D+ Sbjct: 303 TATKRDADSLAERLTEHGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDV 362 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P++ +++++LP E +VHR GRTGRAG+ G A+ + + +ER V R + Sbjct: 363 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHNDTFQWRRIERFVDRRIDAS 422 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDD 538 +E R G DR RG GG+ G+R G G GG+ Sbjct: 423 VVEGLEPKRSAKPRTGGPRAGGDRGGYRG--NGGNGGGYRGQREGYGARQGGN---GGNS 477 Query: 539 WSTEGRRSNGYS 574 + EGR ++ Sbjct: 478 GNNEGRFQRSFA 489 [205][TOP] >UniRef100_A7MJ24 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MJ24_ENTS8 Length = 474 Score = 112 bits (281), Expect = 2e-23 Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 3/192 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK A+ ++ L I + A+HG+ SQ R R L F+ G VLVATD+A+RGLDI Sbjct: 252 TRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGGIRVLVATDIAARGLDI 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +++YELP+ PE +VHR GRTGRA G A+ + + + + +ER + + Sbjct: 312 EELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIERLLKREIPRM 371 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGR--RPGG 532 P E P +P +V+ GR RG + GG RR G+ S G RP G Sbjct: 372 AIPGYEPDPSIPAEPIVN--GRQSRGGRGGQGGGGRGQGQPRRQNGEGNRSSGERSRPAG 429 Query: 533 DDWSTEGRRSNG 568 + GRR +G Sbjct: 430 E----RGRRQDG 437 [206][TOP] >UniRef100_A6H0L1 Probable ATP-dependent RNA helicase, DEAD/DEAH box family n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6H0L1_FLAPJ Length = 644 Score = 112 bits (281), Expect = 2e-23 Identities = 56/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD ++ L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+ Sbjct: 250 RTKRDTQAVAEKLVEDGYSAAALHGDLSQAQRDGVMKAFRGRQIQMLVATDVAARGIDVD 309 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352 NV +++Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE Sbjct: 310 NVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSEIRKISSIERIIKQKFE 366 [207][TOP] >UniRef100_A5FH88 DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FH88_FLAJ1 Length = 634 Score = 112 bits (281), Expect = 2e-23 Identities = 56/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD ++ L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+ Sbjct: 250 RTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATDVAARGIDVD 309 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352 NV +++Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE Sbjct: 310 NVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERIIKQKFE 366 [208][TOP] >UniRef100_C2GIZ2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum ATCC 51866 RepID=C2GIZ2_9CORY Length = 718 Score = 112 bits (281), Expect = 2e-23 Identities = 52/129 (40%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK + +E++ L + +++A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+ Sbjct: 357 RTKYETEELAEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVD 416 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + +++Y++P E+++HR GRTGRAG+ G A++ T ++R + S+ER + E ++ Sbjct: 417 RISHVLNYDIPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATLEEMQ 476 Query: 362 PPPMEDLPE 388 P ++++ E Sbjct: 477 LPTVDEVNE 485 [209][TOP] >UniRef100_C0VTD2 Superfamily II helicase n=1 Tax=Corynebacterium glucuronolyticum ATCC 51867 RepID=C0VTD2_9CORY Length = 718 Score = 112 bits (281), Expect = 2e-23 Identities = 52/129 (40%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK + +E++ L + +++A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+ Sbjct: 357 RTKYETEELAEKLRARGFSAQAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVD 416 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + +++Y++P E+++HR GRTGRAG+ G A++ T ++R + S+ER + E ++ Sbjct: 417 RISHVLNYDIPHDTESYIHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATLEEMQ 476 Query: 362 PPPMEDLPE 388 P ++++ E Sbjct: 477 LPTVDEVNE 485 [210][TOP] >UniRef100_A3XBG1 Putative ATP-dependent RNA helicase protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XBG1_9RHOB Length = 431 Score = 112 bits (281), Expect = 2e-23 Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 1/177 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +++ L S A+ A+HG+ SQ QRER L F+ G+ VLVATDVA+RGLDIP Sbjct: 247 RTKHGMEKLMKVLEKSGFAAAAIHGNKSQGQRERALAAFKSGQIKVLVATDVAARGLDIP 306 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +YELP+ P+ +VHR GRT RAGK+G AV + + + ++++ + Sbjct: 307 DVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCSPDEMEELKAIQKVMKITIPTAS 366 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 P E +P R + G + GG+ GG R G + G +PGG Sbjct: 367 GSPWEPVPGATP---------SRGGRPGGKPGGNRRRGGGGRGQGGGGARSGGKPGG 414 [211][TOP] >UniRef100_A2TP65 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TP65_9FLAO Length = 638 Score = 112 bits (281), Expect = 2e-23 Identities = 56/146 (38%), Positives = 92/146 (63%), Gaps = 1/146 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD +++ L + ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+ Sbjct: 249 RTKRDTQKVAEQLIEDGYNAGALHGDLSQNQRDLVMKSFRNNQIQMLVATDVAARGIDVD 308 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 ++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + LE+ + +F+ Sbjct: 309 DITHVINYQLPDEIETYTHRSGRTGRAGKTGTSMVIVTKSEMRKIKQLEKILAKKFDQKT 368 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQ 439 P +++ ++ + +++ NQ Sbjct: 369 IPDGKEITQVQLFHLANSINNTEINQ 394 [212][TOP] >UniRef100_C1N5K6 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N5K6_9CHLO Length = 513 Score = 112 bits (281), Expect = 2e-23 Identities = 78/197 (39%), Positives = 100/197 (50%), Gaps = 9/197 (4%) Frame = +2 Query: 8 TKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR AD++ L+ S ++HGD +Q +RE L FR GR +LVATDVA+RGLDIP+ Sbjct: 314 TKRGADQLEDWLSREGFPSTSIHGDRTQQEREYALKSFRSGRTPILVATDVAARGLDIPH 373 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFT---ASQKRTVISLERDVGSRFEF 355 V +I+++LP + +VHR GRTGRAGK+G A FT A R++I L + G Sbjct: 374 VTHVINFDLPSDIDDYVHRIGRTGRAGKKGLATAFFTDKDAGLARSMIELMTEAGQEVPS 433 Query: 356 IRPPPMEDLPELPTRQVVSTLGRDRSNQR-GYRTGGDDWSS----GGRRSGGDDWSSGGR 520 L R G+ R R G GG D+ S GG GG DW S G Sbjct: 434 F-------LNGFSGRGGFGGGGKRRGGGRGGGGFGGRDFRSHGGGGGGGGGGGDWPSRGG 486 Query: 521 RPGGDDWSTEGRRSNGY 571 GG G GY Sbjct: 487 GGGGGGGGWGGGGGGGY 503 [213][TOP] >UniRef100_B9S627 Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S627_RICCO Length = 781 Score = 112 bits (281), Expect = 2e-23 Identities = 68/187 (36%), Positives = 96/187 (51%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+ D+++ +LT + + A+HGD SQ +R+ L FR GR VLVATDVA+RGLDI ++ Sbjct: 417 TKKMCDQLARNLTRTFGAAAIHGDKSQSERDHVLSQFRTGRSPVLVATDVAARGLDIKDI 476 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 ++I+Y+ P G E +VHR GRTGRAG G A F + L + + + + PP Sbjct: 477 RVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKYASDLIKVLEGASQRV-PP 535 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDWST 547 + D+ + G + + G GG D GGR G GGR G S Sbjct: 536 EIRDMASRGS-------GMSKFRRWGSAPGGRDGGRGGRSDFGYSGRDGGRGSFGMSSSY 588 Query: 548 EGRRSNG 568 R G Sbjct: 589 SSRPEKG 595 [214][TOP] >UniRef100_Q9XTP2 P68 RNA helicase n=1 Tax=Molgula oculata RepID=Q9XTP2_MOLOC Length = 618 Score = 112 bits (281), Expect = 2e-23 Identities = 71/180 (39%), Positives = 98/180 (54%), Gaps = 3/180 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKR DE++ ++ + +HGD SQ +R+ L+ FR GR +LVATDVASRGLD+ Sbjct: 401 TETKRRCDELTRTMRRDGWPAMCIHGDKSQPERDWVLNEFRSGRSPILVATDVASRGLDV 460 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 +V +I+Y+ P E +VHR GRT RA ++G A FT + L + + + Sbjct: 461 SDVKFVINYDFPSQCEDYVHRIGRTARAEQKGTAYTFFTYDNAKQAKDLIAILQEAKQAV 520 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGY--RTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 P ME + R + GRDR N GY R GG + GG R+G SGG +PGG Sbjct: 521 NPKLME--LGMTFRNYGKSGGRDRRNGGGYGGRGGGGGYRGGGARNG-----SGGGKPGG 573 [215][TOP] >UniRef100_A7T9S8 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7T9S8_NEMVE Length = 244 Score = 112 bits (281), Expect = 2e-23 Identities = 55/117 (47%), Positives = 81/117 (69%), Gaps = 1/117 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD ++ L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+ Sbjct: 124 RTKRDTQAVAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATDVAARGIDVD 183 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352 ++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE Sbjct: 184 DITHVINYQLPDEVETYTHRSGRTGRAGKSGTSLVIITKSELRKISSIERIIKMKFE 240 [216][TOP] >UniRef100_UPI0000ECB487 ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box protein 50) (Nucleolar protein Gu2) (Gu-beta). n=2 Tax=Gallus gallus RepID=UPI0000ECB487 Length = 693 Score = 112 bits (280), Expect = 2e-23 Identities = 56/137 (40%), Positives = 85/137 (62%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK+DA+E++ + + ++LHGDI Q QRE TL GFR G F VLVAT+VA+RGLDIP V Sbjct: 374 TKKDANELALNASIKQDCQSLHGDIPQKQREITLKGFRNGAFKVLVATNVAARGLDIPEV 433 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ P E+++HRSGRTGRAG+ G + + ++ + +E G F+ + P Sbjct: 434 DLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFYQRKEENQLRYVEVKAGITFKRVGVP 493 Query: 368 PMEDLPELPTRQVVSTL 418 D+ + ++ + L Sbjct: 494 TATDIIKASSKDAIRCL 510 [217][TOP] >UniRef100_Q3AFI3 ATP-dependent RNA helicase, DEAD box family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AFI3_CARHZ Length = 430 Score = 112 bits (280), Expect = 2e-23 Identities = 54/139 (38%), Positives = 89/139 (64%), Gaps = 1/139 (0%) Frame = +2 Query: 5 RTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK+ DE+ L A+K LHGD+SQ +R +T+ F+ G+ +LVATDVA+RGLDIP Sbjct: 247 RTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIP 306 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V +I++++P PE+++HR GRTGRAG+EG A+ + +++ + ++E + R + Sbjct: 307 DVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLKREI 366 Query: 362 PPPMEDLPELPTRQVVSTL 418 P DL E +++ + Sbjct: 367 LPEPVDLEEARFKKIAKKI 385 [218][TOP] >UniRef100_B2V9H9 DEAD/DEAH box helicase domain protein n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V9H9_SULSY Length = 405 Score = 112 bits (280), Expect = 2e-23 Identities = 60/148 (40%), Positives = 92/148 (62%), Gaps = 1/148 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T+TK +ADE++ L + A+HGD SQ +RE L FR G+ +LVATDVA+RGLDI Sbjct: 253 TQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARGLDI 312 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 VDL+I+Y LP E+++HR GRTGRAG+EG A+ + T S+ + + ++++ + E I Sbjct: 313 KGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTPSEDKQLQNIQKKTKANIEVI 372 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQR 442 + L S+ +D+S+Q+ Sbjct: 373 NEAQEKKL---------SSAQKDKSSQK 391 [219][TOP] >UniRef100_C5AES8 DEAD/DEAH box helicase-like protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AES8_BURGB Length = 524 Score = 112 bits (280), Expect = 2e-23 Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 15/205 (7%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 310 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 369 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 370 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 422 Query: 359 RPP-PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD--------DWSS 511 R P P+ + R+ G R G GG + SG + GG + S Sbjct: 423 RTPLPVNVIEGFEPRKAPPRGGPGRGRPGGGSGGGRRFGSGSSKPGGSREGGYGSGNRSY 482 Query: 512 GGRRPGGDDWSTE-----GRRSNGY 571 GG G+ W + G R GY Sbjct: 483 GGGGSSGNGWGNKSANGGGNREGGY 507 [220][TOP] >UniRef100_C4FJ61 ATP-dependent RNA helicase DbpA n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJ61_9AQUI Length = 405 Score = 112 bits (280), Expect = 2e-23 Identities = 60/152 (39%), Positives = 94/152 (61%), Gaps = 5/152 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T+TK +ADE++ L + A+HGD SQ +RE L FR G+ +LVATDVA+RGLDI Sbjct: 253 TQTKIEADELAERLNEEGFNASAIHGDFSQKKRETVLHNFRTGKLKILVATDVAARGLDI 312 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 VDL+I+Y LP E+++HR GRTGRAG+EG A+ + T+S+ + + ++++ + E I Sbjct: 313 KGVDLVINYGLPRDAESYIHRIGRTGRAGREGTAISIMTSSEDKQLQNIQKKTKANIEVI 372 Query: 359 RPPPMEDL----PELPTRQVVSTLGRDRSNQR 442 + + P+++ S+ + R QR Sbjct: 373 NEAQEKKFSSAQKDKPSQKERSSRNQTRRKQR 404 [221][TOP] >UniRef100_A8UPQ2 Putative RNA helicase dead-box protein n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UPQ2_9FLAO Length = 638 Score = 112 bits (280), Expect = 2e-23 Identities = 57/145 (39%), Positives = 93/145 (64%), Gaps = 1/145 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD +++ +L ++ ALHGD+SQ QR+ + FR + +LVATDVA+RG+D+ Sbjct: 250 RTKRDTQKVAENLIEDGYSAGALHGDLSQNQRDIVMKSFRNKQIQMLVATDVAARGIDVD 309 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 ++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ + S+ R + S+ER + +FE Sbjct: 310 DITHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIVSKSETRKIKSIERIIKKQFEQKE 369 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSN 436 P ++ E+ + + + +N Sbjct: 370 IPSGMEICEVQLMSLANKIHNTEAN 394 [222][TOP] >UniRef100_A3I2Y4 Putative uncharacterized protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I2Y4_9SPHI Length = 580 Score = 112 bits (280), Expect = 2e-23 Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 6/163 (3%) Frame = +2 Query: 8 TKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR DE + +L S I ++ALHGD+SQ QR++ ++ FR+G TVLVATDVA+RG+D+ N Sbjct: 253 TKRMTDEATEALGSRGILAEALHGDLSQAQRDKVMNKFRKGLCTVLVATDVAARGIDVDN 312 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQK-RTVISLERDVGSRFEFIR 361 V+ + +++LP E++VHR GRTGRAGK G A+ T + + LER + + Sbjct: 313 VEAVFNFDLPLDDESYVHRIGRTGRAGKSGKAINFVTGRRDFGKIRDLERFTKASIAKMD 372 Query: 362 PPPMEDLPELPTRQVV----STLGRDRSNQRGYRTGGDDWSSG 478 PP + DL EL Q V + + ++ NQ T G + G Sbjct: 373 PPSVSDLIELKKAQFVKDVHTVISKEEDNQIFEETVGQLLTEG 415 [223][TOP] >UniRef100_A9SYT2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SYT2_PHYPA Length = 684 Score = 112 bits (280), Expect = 2e-23 Identities = 69/187 (36%), Positives = 96/187 (51%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TKR D +S +L + A+HGD SQ +R+ L FR GR +LVATDVA+RGLDI ++ Sbjct: 404 TKRMCDTLSRNLGRDFGAAAIHGDKSQSERDFVLSQFRTGRTPILVATDVAARGLDIKDI 463 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 ++++Y+ P G E +VHR GRTGRAG G A F+ + L + + + + PP Sbjct: 464 RVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFSEQDGKYAKELIKVLEGANQKV-PP 522 Query: 368 PMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGGDDWST 547 ++D + S G + G R GGD GGR G + G GG S Sbjct: 523 ELKD--------IASRGGGMFKGRMGNRWGGDSGGRGGRDGGRSSYRGGRGDFGGRGSSY 574 Query: 548 EGRRSNG 568 G R G Sbjct: 575 GGGRDGG 581 [224][TOP] >UniRef100_Q2NB74 DNA and RNA helicase n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NB74_ERYLH Length = 492 Score = 112 bits (279), Expect = 3e-23 Identities = 68/179 (37%), Positives = 105/179 (58%), Gaps = 7/179 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L + I S A+HG+ SQ QR+R LD F++ + +L+ATDVA+RG+DI Sbjct: 259 TRTKHGADRVVKKLRQAGIESNAIHGNKSQPQRQRALDEFKRAKTPILIATDVAARGIDI 318 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P V +I+YELP+ PE +VHR GRT RAGK+G A+ ++ + ++++ + EF Sbjct: 319 PGVSHVINYELPNVPEQYVHRIGRTARAGKDGVAIAFCAEDERAYLKDIQKNTDA--EFD 376 Query: 359 RPPPMEDLPEL-----PTRQVVSTLG-RDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGG 517 R P E+ + PT++ G R + + + GG + S + GG+ S+GG Sbjct: 377 RLPLPENFRAVVEGVGPTKREQKQRGPRIKPKPKARKQGGTNRS---KPQGGNPQSAGG 432 [225][TOP] >UniRef100_B1VFV5 ATP-dependent RNA helicase n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VFV5_CORU7 Length = 778 Score = 112 bits (279), Expect = 3e-23 Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK D +E++ L + + A++GDI+Q QRERT+D + GR +LVATDVA+RGLD+ Sbjct: 378 RTKNDTEELAERLRARGYEAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVE 437 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + + +Y++P E++VHR GRTGRAG+ G AV+ T ++R + S+ER SR I Sbjct: 438 RITHVFNYDIPRDTESYVHRIGRTGRAGRSGRAVLFVTPRERRMLKSIERATKSRLNEIE 497 Query: 362 PPPMEDLPE 388 P ++ + E Sbjct: 498 LPSVDQVNE 506 [226][TOP] >UniRef100_B0TII3 Dead/deah box helicase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TII3_HELMI Length = 540 Score = 112 bits (279), Expect = 3e-23 Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKR DE+ +L T ++ LHGD++Q QR+R + FR G+ +L+ATDVA+RGLD+ Sbjct: 264 RTKRGVDELVAALETRGYFAEGLHGDLTQAQRDRVMKKFRDGKAELLIATDVAARGLDVE 323 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 NV +I+Y++P PE++VHR GRTGRAG++G A+ + + R + +ER +R + Sbjct: 324 NVTHVINYDIPQDPESYVHRIGRTGRAGRKGIAITLINYREYRQLKLIERVTKARIQRRD 383 Query: 362 PPPMEDLPE 388 P M D+ E Sbjct: 384 LPSMADIVE 392 [227][TOP] >UniRef100_C7M2L1 DEAD/DEAH box helicase domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2L1_ACIFD Length = 467 Score = 112 bits (279), Expect = 3e-23 Identities = 55/113 (48%), Positives = 80/113 (70%), Gaps = 1/113 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RT+R AD I+ L +A+ A+HGD++Q QRER L+GFR GR LVATDVA+RG+ + Sbjct: 262 RTRRGADRIAERLRGEGLATAAIHGDLNQRQRERALEGFRAGRIDALVATDVAARGIHVD 321 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVG 340 +V L+IH++ P+ +VHRSGRTGRAG+ G+ V + ++ V SL+R++G Sbjct: 322 DVPLVIHFDPPERTTDYVHRSGRTGRAGRRGSVVSLVGPRERSFVRSLQRELG 374 [228][TOP] >UniRef100_C7CMH7 RNA helicase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CMH7_METED Length = 510 Score = 112 bits (279), Expect = 3e-23 Identities = 74/203 (36%), Positives = 104/203 (51%), Gaps = 14/203 (6%) Frame = +2 Query: 2 TRTKRDADEISYSLT-SSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD + L +++ S A+HG+ SQ QRER L FR G VLVATD+A+RG+D+ Sbjct: 252 TRTKHGADRVVRGLDKANVVSAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDV 311 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLER------DVG 340 V +++Y+LP+ PE++VHR GRT RAG EG A+ ++ + +ER VG Sbjct: 312 DGVTHVVNYDLPNVPESYVHRIGRTARAGAEGQAISFCNDEERAYLRDIERTTRQKIPVG 371 Query: 341 SRFEFIRPPPMEDLPE-------LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGD 499 E PP ++ + P RQ + R QR R GG G R Sbjct: 372 GFPEGFVPPSRQEAQDNAAEEARRPPRQ-----PQGRPGQRQGRPGGGRGQGGEGRGEPR 426 Query: 500 DWSSGGRRPGGDDWSTEGRRSNG 568 + G RPGG + +R+ G Sbjct: 427 AHEARGGRPGGQPGHRQDQRAAG 449 [229][TOP] >UniRef100_C0XQJ2 Superfamily II helicase (Fragment) n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XQJ2_9CORY Length = 683 Score = 112 bits (279), Expect = 3e-23 Identities = 53/129 (41%), Positives = 88/129 (68%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK + +E++ L + ++ A++GDI+Q QRERT+D R GR +LVATDVA+RGLD+ Sbjct: 351 RTKHETEELAEKLRARGFSAAAINGDIAQQQRERTVDQLRDGRLDILVATDVAARGLDVE 410 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + + +Y++P+ E++VHR GRTGRAG+ G A++ T ++R + S+ER + E + Sbjct: 411 RISHVFNYDIPNDIESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATIEEME 470 Query: 362 PPPMEDLPE 388 P ++++ E Sbjct: 471 LPTVDEVNE 479 [230][TOP] >UniRef100_B9Y818 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y818_9FIRM Length = 556 Score = 112 bits (279), Expect = 3e-23 Identities = 56/129 (43%), Positives = 84/129 (65%), Gaps = 1/129 (0%) Frame = +2 Query: 8 TKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TK+ DE++ L S + ALHGD+ Q R +D F++G+ +LVATDVA+RG+D+ + Sbjct: 250 TKKMVDELTSDLVSKGYPAAALHGDMKQEMRTGVMDNFKKGKINILVATDVAARGIDVDS 309 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 +D++ +Y+LP E +VHR GRTGRAGKEG AV + TA QK + LER S+ Sbjct: 310 MDVVFNYDLPQESEYYVHRIGRTGRAGKEGLAVTLITARQKYALRDLERTTRSKLTQKPL 369 Query: 365 PPMEDLPEL 391 P +E++ ++ Sbjct: 370 PSLEEVRKI 378 [231][TOP] >UniRef100_A9DY86 Putative RNA helicase dead-box protein n=1 Tax=Kordia algicida OT-1 RepID=A9DY86_9FLAO Length = 591 Score = 112 bits (279), Expect = 3e-23 Identities = 54/117 (46%), Positives = 80/117 (68%), Gaps = 1/117 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD ++ L + A+HGD+SQ QR+ + FR + +LVATDVA+RG+D+ Sbjct: 249 RTKRDTQNVAEKLIEDGYNAAAIHGDLSQNQRDLVMKSFRTRQIQMLVATDVAARGIDVD 308 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFE 352 ++ +I+Y+LPD ET+ HRSGRTGRAGK G ++V+ T S+ R + S+ER + +FE Sbjct: 309 DITHVINYQLPDEIETYTHRSGRTGRAGKNGVSMVIVTKSEMRKIKSIERKIQKKFE 365 [232][TOP] >UniRef100_A6FR40 Putative ATP-dependent RNA helicase, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FR40_9RHOB Length = 470 Score = 112 bits (279), Expect = 3e-23 Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 4/180 (2%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK +D+++ L + A A+HG+ SQ QRER L FR G VLVATDVA+RGLDIP Sbjct: 283 RTKHGSDKLARKLEQAGYAVAAIHGNKSQGQRERALRAFRDGEVRVLVATDVAARGLDIP 342 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V + +++LP+ PE +VHR GRT RAG++GAAV + + +++ + + Sbjct: 343 DVKHVYNFDLPNVPENYVHRIGRTARAGRDGAAVAFCAPDEMGELKDIQKVMKMSIPVLS 402 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSG---GRRPGG 532 E+LP+ + S G R + G + GG + G +G D + G RR GG Sbjct: 403 GRAWEELPD--PKAAPSGRGGPRRGRGGAKGGGGQGQANGHGAGQPDQAQGRPRRRRRGG 460 [233][TOP] >UniRef100_Q234J0 DEAD/DEAH box helicase family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q234J0_TETTH Length = 744 Score = 112 bits (279), Expect = 3e-23 Identities = 56/125 (44%), Positives = 77/125 (61%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK +A+EI + LHGDI Q QRE T GFR+G+F LVAT+VA+RGLDIP V Sbjct: 335 TKNEANEIMLKANIKQDVQVLHGDIPQKQREITFQGFREGKFKCLVATNVAARGLDIPEV 394 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DLI+ E P + ++HRSGRTGRAGK+G + +T Q+ + +E+ + + + P Sbjct: 395 DLIVQLEPPKELDAYIHRSGRTGRAGKKGVCITFYTKKQQSLIERIEKKCHIKMQKVGAP 454 Query: 368 PMEDL 382 DL Sbjct: 455 QPADL 459 [234][TOP] >UniRef100_C3XZX1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3XZX1_BRAFL Length = 655 Score = 112 bits (279), Expect = 3e-23 Identities = 55/125 (44%), Positives = 80/125 (64%) Frame = +2 Query: 8 TKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPNV 187 TK++A+++ ++ LHGDI Q QRE TL FR G VLVATDVA+RGLDIP V Sbjct: 352 TKKEANQLVLEGVLKQEAQVLHGDIPQAQRELTLKSFRDGNIQVLVATDVAARGLDIPEV 411 Query: 188 DLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRPP 367 DL++ E P ++++HRSGRTGRAG+ G V + ++++ + +ER G +F I P Sbjct: 412 DLVVQCEPPSDVDSYIHRSGRTGRAGRTGVCVCFYKPNREQDLRFVERRAGIKFRQINAP 471 Query: 368 PMEDL 382 +D+ Sbjct: 472 QPDDI 476 [235][TOP] >UniRef100_Q75B50 ATP-dependent RNA helicase DED1 n=1 Tax=Eremothecium gossypii RepID=DED1_ASHGO Length = 623 Score = 112 bits (279), Expect = 3e-23 Identities = 76/195 (38%), Positives = 103/195 (52%), Gaps = 7/195 (3%) Frame = +2 Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR AD ++ + + ++++ A+HGD +Q +RER L FR GR VLVAT VA+RGLDIPN Sbjct: 411 TKRMADALTDFLIMQNLSATAIHGDRTQAERERALAFFRTGRANVLVATAVAARGLDIPN 470 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIRP 364 V +I+Y+LP + +VHR GRTGRAG G A F K V L Sbjct: 471 VTHVINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFNRGNKNVVKEL------------- 517 Query: 365 PPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGR------RSGGDDWSSGGRRP 526 D+ E ++V S L + + + Y GG S GGR S D GG Sbjct: 518 ---VDILEEANQEVPSFLSQ-IAKEMSYGGGGGKSSRGGRGGYSRGNSTRDFRRHGG--G 571 Query: 527 GGDDWSTEGRRSNGY 571 GG +WS+ R S+G+ Sbjct: 572 GGSEWSSANRASSGW 586 [236][TOP] >UniRef100_UPI00016AE806 ATP-dependent RNA helicase n=1 Tax=Burkholderia pseudomallei B7210 RepID=UPI00016AE806 Length = 347 Score = 111 bits (278), Expect = 3e-23 Identities = 73/178 (41%), Positives = 100/178 (56%), Gaps = 1/178 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 182 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 241 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 242 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 294 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 R P ++ E + DR N RG R GG+ +GGRR GG GG GG Sbjct: 295 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGG---KPGGGHGGG 346 [237][TOP] >UniRef100_UPI00016ADCF4 ATP-dependent RNA helicase n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016ADCF4 Length = 475 Score = 111 bits (278), Expect = 3e-23 Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 1/177 (0%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 312 TATKIDADQLAGRLADAGFQSAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 371 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 372 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGTAVSLVHHAEQGALKRIER-------FV 424 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPG 529 R P ++ E + DR N RG R GG+ +GGRR GG GG R G Sbjct: 425 RAPLPVNVVEGFEPRKAPPPRNDRGNGRG-RPGGN--GNGGRRFGG---KPGGGRSG 475 [238][TOP] >UniRef100_Q8Y0U1 Putative atp-dependent rna helicase protein n=1 Tax=Ralstonia solanacearum RepID=Q8Y0U1_RALSO Length = 608 Score = 111 bits (278), Expect = 3e-23 Identities = 72/198 (36%), Positives = 102/198 (51%), Gaps = 10/198 (5%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKRDAD ++ LT + ++ ALHGD+ Q R RTL R+G+ VLVATDVA+RG+D+ Sbjct: 300 TATKRDADSLAERLTETGFSAGALHGDMHQGARNRTLTALRRGQLRVLVATDVAARGIDV 359 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P++ +++++LP E +VHR GRTGRAG+ G A+ + +ER V R + Sbjct: 360 PDITHVVNFDLPKQAEDYVHRIGRTGRAGRSGIAINLVNHGDTFQWRRIERFVDRRIDAT 419 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDW---------SSGGRRSGGDDWSS 511 +E R G DR RG GG +W +G +GG+ Sbjct: 420 VVEGLEPKRSPKPRSGGPRAGGDRGGYRG--NGGGNWRGQRDGYAARTGNGGNGGNSEGR 477 Query: 512 GGRRPGGDDWSTEGRRSN 565 R GGD S RR + Sbjct: 478 FQRSFGGDRESFAPRRDD 495 [239][TOP] >UniRef100_Q13X86 Putative ATP-dependent RNA helicase n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13X86_BURXL Length = 537 Score = 111 bits (278), Expect = 3e-23 Identities = 75/192 (39%), Positives = 103/192 (53%), Gaps = 3/192 (1%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TK DAD+++ L + S ALHGD+ Q R RT+ R+ R VLVATDVA+RG+DI Sbjct: 319 TATKIDADQLAGRLADAGFESAALHGDLPQGARNRTIRALRERRVRVLVATDVAARGIDI 378 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 P + + +Y+LP E +VHR GRTGRAG+ G AV + +++ + +ER F+ Sbjct: 379 PGITHVFNYDLPKFAEDYVHRIGRTGRAGRSGIAVSLVHHAEQGALKRIER-------FV 431 Query: 359 RPPPMEDLPE--LPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 R P ++ E P + S GR RG GG + GGRR G S G+ G Sbjct: 432 RTPLAVNVVEGFEPRKSAPSGNGRPGFGGRGRPGGG---NGGGRRFG----SGSGKPAGN 484 Query: 533 DDWSTEGRRSNG 568 + G SNG Sbjct: 485 GGAARSGTGSNG 496 [240][TOP] >UniRef100_C6XEK8 DEAD/DEAH box helicase domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEK8_METSD Length = 468 Score = 111 bits (278), Expect = 3e-23 Identities = 75/196 (38%), Positives = 99/196 (50%), Gaps = 7/196 (3%) Frame = +2 Query: 2 TRTKRDADEISYSL-TSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 T TKR AD ++ L + S ALHGD++Q R RTL R G VLVATDVA+RG+D+ Sbjct: 253 TSTKRHADLLAEDLYAAGHKSAALHGDMTQGARNRTLTKLRHGDVRVLVATDVAARGIDV 312 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +I+Y+LP E +VHR GRTGRAG G AV + + + + +E+ G R E Sbjct: 313 QGITHVINYDLPKFAEDYVHRIGRTGRAGNTGVAVSFASHADRHQLRKIEQYTGQRIEIT 372 Query: 359 RPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGG------RRSGGDDWSSGGR 520 E P + GR RS G ++G GG R + G S G R Sbjct: 373 VIEGFEPKRPAPRSDDRGSNGRPRSGNPGSKSGFKPRGQGGYAGNNPRSASGAGNSEGNR 432 Query: 521 RPGGDDWSTEGRRSNG 568 GG +EG RS G Sbjct: 433 GFGG---RSEGNRSEG 445 [241][TOP] >UniRef100_C8WWM6 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WWM6_ALIAC Length = 541 Score = 111 bits (278), Expect = 3e-23 Identities = 54/129 (41%), Positives = 84/129 (65%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKR D++ +L + + LHGD+SQ QR+R + FR+ +LVATDVA+RGLD+ Sbjct: 262 RTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELLVATDVAARGLDVD 321 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V +I+Y++P PE++VHR GRTGRAGK G A+ + T + + + +ER++ + Sbjct: 322 DVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKLLKQIEREIKQKITVRE 381 Query: 362 PPPMEDLPE 388 P +ED+ E Sbjct: 382 VPSLEDVAE 390 [242][TOP] >UniRef100_B7DS98 DEAD/DEAH box helicase domain protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DS98_9BACL Length = 465 Score = 111 bits (278), Expect = 3e-23 Identities = 54/129 (41%), Positives = 84/129 (65%), Gaps = 1/129 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTS-SIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKR D++ +L + + LHGD+SQ QR+R + FR+ +LVATDVA+RGLD+ Sbjct: 263 RTKRGVDDLVEALLARGYLADGLHGDLSQAQRDRVMRKFRKNEIELLVATDVAARGLDVD 322 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 +V +I+Y++P PE++VHR GRTGRAGK G A+ + T + + + +ER++ + Sbjct: 323 DVTHVINYDVPQDPESYVHRIGRTGRAGKRGLAITLVTPREYKLLKQIEREIKQKITVRE 382 Query: 362 PPPMEDLPE 388 P +ED+ E Sbjct: 383 VPSLEDVAE 391 [243][TOP] >UniRef100_B4WNH7 DbpA RNA binding domain family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNH7_9SYNE Length = 570 Score = 111 bits (278), Expect = 3e-23 Identities = 62/147 (42%), Positives = 91/147 (61%), Gaps = 1/147 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSSIASKA-LHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTK E+S L + + A L GD+ Q QRERT++ RQG+ +LVATDVA+RGLD+ Sbjct: 253 RTKVATVELSEKLEARGYNTAPLSGDVPQNQRERTVERLRQGKLDILVATDVAARGLDVE 312 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 + +I+Y++P PE +VHR GRTGRAG+EG A++ T +KR + S+ER R E + Sbjct: 313 RISHVINYDMPYDPEAYVHRIGRTGRAGREGEAILFVTPREKRLLSSIERSTRQRIERM- 371 Query: 362 PPPMEDLPELPTRQVVSTLGRDRSNQR 442 E+P+ +VV+ +R Q+ Sbjct: 372 --------EMPSTEVVNDQRIERFKQK 390 [244][TOP] >UniRef100_A7V1A9 Putative uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V1A9_BACUN Length = 425 Score = 111 bits (278), Expect = 3e-23 Identities = 59/161 (36%), Positives = 96/161 (59%), Gaps = 5/161 (3%) Frame = +2 Query: 2 TRTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDI 178 TRTK AD+++ +L+ S I ++A+HG+ SQ R+R L GF+ VL+ATD+A+RG+D+ Sbjct: 248 TRTKYGADKLARTLSKSGIRAEAIHGNKSQNARQRALTGFKNHELRVLIATDIAARGIDV 307 Query: 179 PNVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFI 358 + +I+YELP+ PET+VHR GRTGRAG +G A+ + + + +++ +G I Sbjct: 308 DQLSHVINYELPNIPETYVHRIGRTGRAGHDGIALSFCESEELPYLKDIQKLIGKSIPVI 367 Query: 359 RPPPMEDLPELPTRQV----VSTLGRDRSNQRGYRTGGDDW 469 + P L +++ + ++ RG RT GD W Sbjct: 368 KEHPFVTADGLKAQKIKTEEIKAKTKENKIYRGSRTNGDFW 408 [245][TOP] >UniRef100_A3UBX0 ATP-dependent RNA helicase, DEAD/DEAH box family protein n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3UBX0_9FLAO Length = 623 Score = 111 bits (278), Expect = 3e-23 Identities = 55/139 (39%), Positives = 88/139 (63%), Gaps = 1/139 (0%) Frame = +2 Query: 5 RTKRDADEISYSLTSS-IASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 RTKRD +++ L ++ A+HGD+SQ QR+ + FR + +LVATDVA+RG+D+ Sbjct: 231 RTKRDTQKVAEQLIQDGYSAGAIHGDLSQNQRDLVMRSFRTRQIQMLVATDVAARGIDVD 290 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 ++ +IHY LPD PE + HRSGRTGRAGK G ++ + T S+ R + ++E+ + FE Sbjct: 291 DITHVIHYTLPDEPEVYTHRSGRTGRAGKSGTSMTIATKSEMRKIKAIEKRIQRNFERKD 350 Query: 362 PPPMEDLPELPTRQVVSTL 418 P E++ ++ + S + Sbjct: 351 VPDGEEICQVQLFHLASQI 369 [246][TOP] >UniRef100_B9N3Z3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9N3Z3_POPTR Length = 402 Score = 111 bits (278), Expect = 3e-23 Identities = 54/64 (84%), Positives = 63/64 (98%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T+TKRDADE+S +LT++IAS+ALHGDISQ+QRERTL+GFRQG+FTVLVATDVASRGLDIP Sbjct: 60 TQTKRDADEVSMALTNTIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 119 Query: 182 NVDL 193 NVDL Sbjct: 120 NVDL 123 [247][TOP] >UniRef100_Q4CYD2 Nucleolar RNA helicase II, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CYD2_TRYCR Length = 633 Score = 111 bits (278), Expect = 3e-23 Identities = 56/141 (39%), Positives = 85/141 (60%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK++ ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P Sbjct: 314 TNTKKECHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 372 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL+I P + F+HR+GRTGRAG++G V++ + V +ER +FE + Sbjct: 373 MVDLVIQCAPPTDIDAFIHRAGRTGRAGRKGVCVLLHQPKDEYIVERIERHAKIKFEVLP 432 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 P +++ R L R Sbjct: 433 APTRDEILRAVARDAAEDLAR 453 [248][TOP] >UniRef100_Q4CUA4 Nucleolar RNA helicase II, putative n=1 Tax=Trypanosoma cruzi RepID=Q4CUA4_TRYCR Length = 660 Score = 111 bits (278), Expect = 3e-23 Identities = 56/141 (39%), Positives = 85/141 (60%) Frame = +2 Query: 2 TRTKRDADEISYSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIP 181 T TK++ ++S + T + S+ LHGD+ Q QRE T+ FR +F+VL+ATDVA+RGLD+P Sbjct: 314 TNTKKECHDLSINNTK-LDSQCLHGDMQQEQRESTMKSFRDNKFSVLIATDVAARGLDLP 372 Query: 182 NVDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQKRTVISLERDVGSRFEFIR 361 VDL+I P + F+HR+GRTGRAG++G V++ + V +ER +FE + Sbjct: 373 MVDLVIQCAPPTDIDAFIHRAGRTGRAGRKGVCVLLHQPKDEYIVERIERHAKIKFEVLP 432 Query: 362 PPPMEDLPELPTRQVVSTLGR 424 P +++ R L R Sbjct: 433 APTRDEILRAVARDAAEDLAR 453 [249][TOP] >UniRef100_C6H4W7 ATP-dependent RNA helicase DED1 n=1 Tax=Ajellomyces capsulatus H143 RepID=C6H4W7_AJECH Length = 694 Score = 111 bits (278), Expect = 3e-23 Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 5/180 (2%) Frame = +2 Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR AD +S + L + + A+HGD +Q +RER L+ FR GR +LVAT VA+RGLDIPN Sbjct: 470 TKRQADMLSDFLLDHRLPATAIHGDRTQRERERALELFRTGRCPILVATAVAARGLDIPN 529 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQK----RTVISLERDVGSRFE 352 V +I+Y+LP+ + +VHR GRTGRAG G + F+ S+ R+++ L +D Sbjct: 530 VTHVINYDLPNEIDDYVHRIGRTGRAGNTGISTAFFSRSKNFKIARSLVDLLKDAN---- 585 Query: 353 FIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 +++P+ + LGR + N G GG GGR GG + RR GG Sbjct: 586 -------QEVPDF-----LEKLGR-QGNYYGSSGGGRGGRGGGRGRGGSSSTRDIRRTGG 632 [250][TOP] >UniRef100_C0NAF4 ATP-dependent RNA helicase DED1 n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NAF4_AJECG Length = 694 Score = 111 bits (278), Expect = 3e-23 Identities = 71/180 (39%), Positives = 101/180 (56%), Gaps = 5/180 (2%) Frame = +2 Query: 8 TKRDADEIS-YSLTSSIASKALHGDISQYQRERTLDGFRQGRFTVLVATDVASRGLDIPN 184 TKR AD +S + L + + A+HGD +Q +RER L+ FR GR +LVAT VA+RGLDIPN Sbjct: 470 TKRQADMLSDFLLDHRLPATAIHGDRTQRERERALELFRTGRCPILVATAVAARGLDIPN 529 Query: 185 VDLIIHYELPDGPETFVHRSGRTGRAGKEGAAVVMFTASQK----RTVISLERDVGSRFE 352 V +I+Y+LP+ + +VHR GRTGRAG G + F+ S+ R+++ L +D Sbjct: 530 VTHVINYDLPNEIDDYVHRIGRTGRAGNTGISTAFFSRSKNFKIARSLVDLLKDAN---- 585 Query: 353 FIRPPPMEDLPELPTRQVVSTLGRDRSNQRGYRTGGDDWSSGGRRSGGDDWSSGGRRPGG 532 +++P+ + LGR + N G GG GGR GG + RR GG Sbjct: 586 -------QEVPDF-----LEKLGR-QGNYYGSSGGGRGGRGGGRGRGGSSSTRDIRRTGG 632