BB906384 ( RCE04582 )

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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=UPI0000163E03
          Length = 824

 Score =  314 bits (804), Expect = 4e-84
 Identities = 146/189 (77%), Positives = 166/189 (87%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GML++DPA VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPL
Sbjct: 547  GMLKYDPAKVLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPL 606

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            KMG+ GEHVPI+YG GVG LPTK WV+ FG+ S LKN  GYLI+P+LR Q+EAGKR++FM
Sbjct: 607  KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 666

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 542
            SPAPYVANNAALIAFG+  K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF
Sbjct: 667  SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 726

Query: 543  VDGETYAAL 569
             +GETYAAL
Sbjct: 727  ANGETYAAL 735

[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  314 bits (804), Expect = 4e-84
 Identities = 146/189 (77%), Positives = 166/189 (87%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GML++DPA VLDHMSG+DFKKFMHVSEQGNKAHFYT +LGV GPHYKP E DFIVSTEPL
Sbjct: 1987 GMLKYDPAKVLDHMSGLDFKKFMHVSEQGNKAHFYTEMLGVAGPHYKPQENDFIVSTEPL 2046

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            KMG+ GEHVPI+YG GVG LPTK WV+ FG+ S LKN  GYLI+P+LR Q+EAGKR++FM
Sbjct: 2047 KMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFM 2106

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 542
            SPAPYVANNAALIAFG+  K+L Q+DALVHYRN IPEST+GLEQYFDAP+P A +G FYF
Sbjct: 2107 SPAPYVANNAALIAFGTGGKMLIQKDALVHYRNVIPESTSGLEQYFDAPLPTATIGTFYF 2166

Query: 543  VDGETYAAL 569
             +GETYAAL
Sbjct: 2167 ANGETYAAL 2175

[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  299 bits (766), Expect = 9e-80
 Identities = 144/189 (76%), Positives = 162/189 (85%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GM ++DPA VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PL
Sbjct: 547  GMQKYDPAVVLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPL 606

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            K G+ GE+VPI +G G+G LPTK WV  FGK S LKN+KGYLI  LLREQ+EAGKR+IFM
Sbjct: 607  KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 666

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 542
             PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF
Sbjct: 667  GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 726

Query: 543  VDGETYAAL 569
             DGETY AL
Sbjct: 727  GDGETYTAL 735

[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  299 bits (766), Expect = 9e-80
 Identities = 144/189 (76%), Positives = 162/189 (85%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GM ++DPA VLDHMSGVDFK+FMH+SEQGNKAHFYT +LGV GPHYKP E DFIVS +PL
Sbjct: 1989 GMQKYDPAVVLDHMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPL 2048

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            K G+ GE+VPI +G G+G LPTK WV  FGK S LKN+KGYLI  LLREQ+EAGKR+IFM
Sbjct: 2049 KPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFM 2108

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 542
             PAPYVANNAALI+FGSA K+L Q+DAL HYRN IPEST+GLEQYFDAPIPQA+VG FYF
Sbjct: 2109 GPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGLEQYFDAPIPQASVGTFYF 2168

Query: 543  VDGETYAAL 569
             DGETY AL
Sbjct: 2169 GDGETYTAL 2177

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=UPI00017F0C90
          Length = 826

 Score =  251 bits (641), Expect = 3e-65
 Identities = 119/189 (62%), Positives = 145/189 (76%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GMLRHDPA +LD ++G +F +FM  S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+
Sbjct: 546  GMLRHDPAKILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPI 605

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            K G  G H+PIK GGGVG LPT  WV +FG+ S LKN  GY  Y LL EQ+E GKR++FM
Sbjct: 606  KQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFM 664

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 542
            S APYVA NAALI+FGS+ K+L ++  L HYRN IPES  GL  YFDAP+P A +G+ YF
Sbjct: 665  SAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYF 724

Query: 543  VDGETYAAL 569
             +GETYAAL
Sbjct: 725  ANGETYAAL 733

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  251 bits (641), Expect = 3e-65
 Identities = 119/189 (62%), Positives = 145/189 (76%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GMLRHDPA +LD ++G +F +FM  S +G+KAHFYT +LGVCGPHYKP E+DF+VST P+
Sbjct: 1972 GMLRHDPAKILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPI 2031

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            K G  G H+PIK GGGVG LPT  WV +FG+ S LKN  GY  Y LL EQ+E GKR++FM
Sbjct: 2032 KQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFM 2090

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANVGQFYF 542
            S APYVA NAALI+FGS+ K+L ++  L HYRN IPES  GL  YFDAP+P A +G+ YF
Sbjct: 2091 SAAPYVAGNAALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYF 2150

Query: 543  VDGETYAAL 569
             +GETYAAL
Sbjct: 2151 ANGETYAAL 2159

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=UPI00003FE52F
          Length = 846

 Score =  180 bits (456), Expect = 8e-44
 Identities = 95/192 (49%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GM  + PA  +D   G +F +FMH S+ GN+ HF    L V GP YKP  +  +VST PL
Sbjct: 554  GMEAYQPAKEIDLDVGQEFARFMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPL 613

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            K G  G  VP++ G G+G LPT  WV  F + + L +A GY I+  +R  +E+GK ++F 
Sbjct: 614  KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 673

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFY 539
            S APYVA NAAL+AFG A KLL  + AL  YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 674  SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 733

Query: 540  FVDGETYAALND 575
              + E+ + L +
Sbjct: 734  LANAESESLLQE 745

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  180 bits (456), Expect = 8e-44
 Identities = 95/192 (49%), Positives = 123/192 (64%), Gaps = 1/192 (0%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPL 182
            GM  + PA  +D   G +F +FMH S+ GN+ HF    L V GP YKP  +  +VST PL
Sbjct: 2044 GMEAYQPAKEIDLDVGQEFARFMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPL 2103

Query: 183  KMGILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAGKRIIFM 362
            K G  G  VP++ G G+G LPT  WV  F + + L +A GY I+  +R  +E+GK ++F 
Sbjct: 2104 KQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFR 2163

Query: 363  SPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYFDAPIPQANV-GQFY 539
            S APYVA NAAL+AFG A KLL  + AL  YRN IPEST GLEQYFDA IPQA++ G FY
Sbjct: 2164 SEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPESTYGLEQYFDAAIPQASLPGTFY 2223

Query: 540  FVDGETYAALND 575
              + E+ + L +
Sbjct: 2224 LANAESESLLQE 2235

[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
 Frame = +3

Query: 3    GMLRHDPASVLDHMSGVDFKKFMHVSEQGNKAH--FYTSVLGVCGPHY--KPCEEDFIVS 170
            G + + P + ++ +  +   K M ++  G + H  +    + V GP +  + C++ F+VS
Sbjct: 1727 GAMPYRPQASMELLVDMHTDKKM-MANHGEQDHLIYVQPRIAVSGPKWIIESCDKQFVVS 1785

Query: 171  TEPLKMG--ILGEHVPIKYGGGVGRLPTKNWVMSFGKSSSLKNAKGYLIYPLLREQLEAG 344
            T PL       G H+P++ G G+GR+P+++WV  F +   +++ +  +IY    +   AG
Sbjct: 1786 TLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR---IRHVQIRVIY----DAYAAG 1838

Query: 345  KRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCIPESTTGLEQYF 500
            K IIF   APY+A   A I+F  A +  + RD L  Y N    +++G+EQYF
Sbjct: 1839 KTIIFKDVAPYIAGWTAAISFACA-QQYSYRDMLNRYNNVCTPNSSGIEQYF 1889

[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
 Frame = +3

Query: 123 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 287
           +CGP +     E  F+VST PL+    G   H  I+Y   GVGRLP+++WV  F  S+  
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622

Query: 288 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 467
             A+       +R+   +GK I F    PYVAN  A I F   +           Y++ I
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667

Query: 468 PESTTGLEQYFDAPIPQANVGQFYF 542
                    Y D  +P ++   FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685

[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
 Frame = +3

Query: 123  VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGVGRLPTKNWVMSFGKSSSL 287
            +CGP +     E  F+VST PL+    G   H  I+Y   GVGRLP+++WV  F  S+  
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009

Query: 288  KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSAIKLLNQRDALVHYRNCI 467
              A+       +R+   +GK I F    PYVAN  A I F   +           Y++ I
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054

Query: 468  PESTTGLEQYFDAPIPQANVGQFYF 542
                     Y D  +P ++   FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072