BB906304 ( RCE04493 )

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[1][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  211 bits (536), Expect = 4e-53
 Identities = 104/194 (53%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1   LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
           +GT A T  PL+ A K V+ S   +YSYA G+LSHFLGVGG + F V  TSS FVS +LR
Sbjct: 20  VGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLR 79

Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
           + +WG   T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE
Sbjct: 80  VALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPE 139

Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMK 537
            +ES  E+YI+I GI++   LC+ INYKQ FGWF +VR   T+KE  + +PSR++N+  K
Sbjct: 140 AIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYK 199

Query: 538 GVECTNFVNAFAIM 579
             E  N VNAF+IM
Sbjct: 200 EAEVINHVNAFSIM 213

[2][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  211 bits (536), Expect = 4e-53
 Identities = 104/194 (53%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1    LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
            +GT A T  PL+ A K V+ S   +YSYA G+LSHFLGVGG + F V  TSS FVS +LR
Sbjct: 1040 VGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLR 1099

Query: 181  IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
            + +WG   T+ Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE
Sbjct: 1100 VALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPE 1159

Query: 361  KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMK 537
             +ES  E+YI+I GI++   LC+ INYKQ FGWF +VR   T+KE  + +PSR++N+  K
Sbjct: 1160 AIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYK 1219

Query: 538  GVECTNFVNAFAIM 579
              E  N VNAF+IM
Sbjct: 1220 EAEVINHVNAFSIM 1233

[3][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  209 bits (532), Expect = 1e-52
 Identities = 102/196 (52%), Positives = 134/196 (68%), Gaps = 3/196 (1%)
 Frame = +1

Query: 1   LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
           +G   +   PL+ A +  ++SG   YSYA G+LSHFLG+GGT+ F +  TSS FV+ +LR
Sbjct: 196 IGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLR 255

Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
           + +WG T T+ Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE
Sbjct: 256 VALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPE 315

Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLV 531
            +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP      K  ++ +PSRV N+ 
Sbjct: 316 TMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIA 375

Query: 532 MKGVECTNFVNAFAIM 579
            K    TN+VNAFAIM
Sbjct: 376 YKEATVTNYVNAFAIM 391

[4][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  209 bits (532), Expect = 1e-52
 Identities = 102/196 (52%), Positives = 134/196 (68%), Gaps = 3/196 (1%)
 Frame = +1

Query: 1    LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
            +G   +   PL+ A +  ++SG   YSYA G+LSHFLG+GGT+ F +  TSS FV+ +LR
Sbjct: 1006 IGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLR 1065

Query: 181  IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
            + +WG T T+ Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE
Sbjct: 1066 VALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPE 1125

Query: 361  KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLV 531
             +ESK E+YI+I GID+ P +C+QINY QRF WF ++RP      K  ++ +PSRV N+ 
Sbjct: 1126 TMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIA 1185

Query: 532  MKGVECTNFVNAFAIM 579
             K    TN+VNAFAIM
Sbjct: 1186 YKEATVTNYVNAFAIM 1201

[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  206 bits (523), Expect = 1e-51
 Identities = 102/194 (52%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
 Frame = +1

Query: 1   LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
           +GT A T  PL+ AEKS+T++  ETYSY+ G+LSHFLG+GG +RF VHSTSS  ++ KLR
Sbjct: 195 IGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLR 254

Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
           + +W  +    +  +  H   + G      IQ+   +TANFG  GA+FW++PLS+P AP+
Sbjct: 255 VFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQ 313

Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMK 537
            VE+KFEFYIRI GID  PDLC+QINYKQRFGWFM+ P + T  E    +PSR+ N+ +K
Sbjct: 314 TVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVK 373

Query: 538 GVECTNFVNAFAIM 579
             +C NF NAFAIM
Sbjct: 374 NTKCVNFTNAFAIM 387

[6][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  205 bits (522), Expect = 2e-51
 Identities = 102/195 (52%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
 Frame = +1

Query: 1   LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
           +GT+A    P++LA K  +TSG   YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLR
Sbjct: 195 VGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLR 254

Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
           I +WGT P   Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE
Sbjct: 255 IALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPE 314

Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVM 534
            VE+  E+YI+I GI++ P LC++INYKQRF W ++      K    ++ +PSR+ NL  
Sbjct: 315 TVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSS 374

Query: 535 KGVECTNFVNAFAIM 579
           K V+ TNFVNA AI+
Sbjct: 375 KHVKVTNFVNALAIL 389

[7][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  205 bits (522), Expect = 2e-51
 Identities = 102/195 (52%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
 Frame = +1

Query: 1    LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
            +GT+A    P++LA K  +TSG   YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLR
Sbjct: 1032 VGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLR 1091

Query: 181  IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
            I +WGT P   Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE
Sbjct: 1092 IALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPE 1151

Query: 361  KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVM 534
             VE+  E+YI+I GI++ P LC++INYKQRF W ++      K    ++ +PSR+ NL  
Sbjct: 1152 TVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSS 1211

Query: 535  KGVECTNFVNAFAIM 579
            K V+ TNFVNA AI+
Sbjct: 1212 KHVKVTNFVNALAIL 1226

[8][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  205 bits (521), Expect = 2e-51
 Identities = 94/195 (48%), Positives = 135/195 (69%), Gaps = 2/195 (1%)
 Frame = +1

Query: 1    LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
            +GT+  T +P++LA +  + +  + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR
Sbjct: 1028 IGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLR 1087

Query: 181  IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
            + +WGT PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE
Sbjct: 1088 VALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPE 1147

Query: 361  KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVM 534
             +E+ F++YI IHGI+++  LC++INY Q F WFM+      T     + +P+R++NL  
Sbjct: 1148 TMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTS 1207

Query: 535  KGVECTNFVNAFAIM 579
            K V+ TNFVNA AIM
Sbjct: 1208 KEVQVTNFVNALAIM 1222

[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  202 bits (515), Expect = 1e-50
 Identities = 96/195 (49%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
 Frame = +1

Query: 1   LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
           +GT+  T +P++LA +  + +  + YSYA GILSHFLGVGG + FSVHST+S FVSC LR
Sbjct: 195 VGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLR 254

Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
           I +WGT PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE
Sbjct: 255 IALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPE 314

Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVM 534
            +E+ F++YI IHGI  + +LC++INY Q F WFM+      T     + +P+R++NL  
Sbjct: 315 TMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTS 374

Query: 535 KGVECTNFVNAFAIM 579
           K V+ TNFVNA AIM
Sbjct: 375 KEVQITNFVNALAIM 389

[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  202 bits (515), Expect = 1e-50
 Identities = 96/195 (49%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
 Frame = +1

Query: 1    LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
            +GT+  T +P++LA +  + +  + YSYA GILSHFLGVGG + FSVHST+S FVSC LR
Sbjct: 1027 VGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLR 1086

Query: 181  IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
            I +WGT PT  +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE
Sbjct: 1087 IALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPE 1146

Query: 361  KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVM 534
             +E+ F++YI IHGI  + +LC++INY Q F WFM+      T     + +P+R++NL  
Sbjct: 1147 TMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTS 1206

Query: 535  KGVECTNFVNAFAIM 579
            K V+ TNFVNA AIM
Sbjct: 1207 KEVQITNFVNALAIM 1221

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  109 bits (272), Expect = 2e-22
 Identities = 59/193 (30%), Positives = 98/193 (50%)
 Frame = +1

Query: 1   LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
           LG    T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ KL 
Sbjct: 208 LGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLH 266

Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
           I +W     +       H D   G + +L I+  FY+++ +G  GA   +  L SPM+P 
Sbjct: 267 ISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPN 326

Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKG 540
            +++ F+   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + 
Sbjct: 327 AIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESED 386

Query: 541 VECTNFVNAFAIM 579
           ++ T + NAF  M
Sbjct: 387 MKVTGYTNAFLQM 399

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  107 bits (268), Expect = 5e-22
 Identities = 60/193 (31%), Positives = 98/193 (50%)
 Frame = +1

Query: 1   LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
           LG    T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ + R
Sbjct: 196 LGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSR 254

Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
           I +W     I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P 
Sbjct: 255 ISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPN 314

Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKG 540
            +++ F+   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + 
Sbjct: 315 AIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESED 374

Query: 541 VECTNFVNAFAIM 579
           ++ T + NAF  M
Sbjct: 375 MKVTGYTNAFLQM 387

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  107 bits (268), Expect = 5e-22
 Identities = 60/193 (31%), Positives = 98/193 (50%)
 Frame = +1

Query: 1    LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
            LG    T +PL+ A KS  +     YS+A   L+HF G+GG +   V+   S+ V+ + R
Sbjct: 879  LGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSR 937

Query: 181  IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
            I +W     I       H D   G + +L I+  FY+++ +G  GA   V  L SPM+P 
Sbjct: 938  ISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPN 997

Query: 361  KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKG 540
             +++ F+   +I G      +C+ IN+ QRFGWF V P  +    ++ +    ++L  + 
Sbjct: 998  AIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESED 1057

Query: 541  VECTNFVNAFAIM 579
            ++ T + NAF  M
Sbjct: 1058 MKVTGYTNAFLQM 1070

[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
           RepID=Q65624_9SECO
          Length = 557

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
 Frame = +1

Query: 61  SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 231
           SG  T YS+          VGG +  +V  T SK +SC++ +I+    T   + Q  ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317

Query: 232 HCDIVEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 408
            C I  GG    +RIQ+PF     F + G Q  +  +  PM  + + + +++ +    I 
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376

Query: 409 SQPD-LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 573
            + D   + I     F W  +        FQ  +P+R+S+LV+ G   T   NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430

[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +1

Query: 79  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337

[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
 Frame = +1

Query: 82  YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 255
           Y+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290

Query: 256 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 423
             E+ I++ F+S A       +  ++PLS P+AP+     +EF + I+    DSQ  P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350

Query: 424 CKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECT 552
                    F    ++P+         +P  + +   K    T
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393

[17][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID55_9SECO
          Length = 784

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
 Frame = +1

Query: 1    LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
            L T A+T L    A     ++G E   +   I+S + G  GT    +    +  V C L 
Sbjct: 463  LATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGEIIKVGTAQVQCDLL 522

Query: 181  IIIWGT-TP--TIAQTGQMPHCDIVEGGSGE--LRIQSPFYSTANFGSEGAQFWVIPLSS 345
            I +  + TP     Q  + PH  +++GG GE  LRI +P  + A+F S G    ++  + 
Sbjct: 523  IYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAP-EAIASFHSGGVFLHIVVAAG 580

Query: 346  PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRP--EGTDKEFQMFVPSRV 519
            P AP+ V + FEF +    IDS   + + +     F W  +    +GT     + +PSR 
Sbjct: 581  PTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSWVTLSAFLQGT---ATILLPSRP 637

Query: 520  SNLVMKG 540
            + +   G
Sbjct: 638  ATITRFG 644

[18][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
 Frame = +1

Query: 79  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289

Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 426
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I+    DSQ    
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348

Query: 427 KQINYKQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECT 552
              +  + + WF    ++P+         +P  + +   K    T
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393

[19][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = +1

Query: 79  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
           SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287

Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335

[20][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
 Frame = +1

Query: 79   SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
            SY+  ++S  LG  GT+  SV S SS F +    I  W     PT+ Q    PH  +   
Sbjct: 816  SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875

Query: 253  GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
            G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I
Sbjct: 876  GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923

[21][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +1

Query: 79  SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
           SY+  ++S  LG  GT+  SV S SS F +    I  W   T PT+ Q    PH  +   
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289

Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
           G  E+  ++  +S++       +  ++PLS P+AP+     +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337