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[1][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 211 bits (536), Expect = 4e-53
Identities = 104/194 (53%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR
Sbjct: 20 VGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLR 79
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE
Sbjct: 80 VALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPE 139
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMK 537
+ES E+YI+I GI++ LC+ INYKQ FGWF +VR T+KE + +PSR++N+ K
Sbjct: 140 AIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYK 199
Query: 538 GVECTNFVNAFAIM 579
E N VNAF+IM
Sbjct: 200 EAEVINHVNAFSIM 213
[2][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 211 bits (536), Expect = 4e-53
Identities = 104/194 (53%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR
Sbjct: 1040 VGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLR 1099
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE
Sbjct: 1100 VALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPE 1159
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEGTDKEFQMFVPSRVSNLVMK 537
+ES E+YI+I GI++ LC+ INYKQ FGWF +VR T+KE + +PSR++N+ K
Sbjct: 1160 AIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYK 1219
Query: 538 GVECTNFVNAFAIM 579
E N VNAF+IM
Sbjct: 1220 EAEVINHVNAFSIM 1233
[3][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 209 bits (532), Expect = 1e-52
Identities = 102/196 (52%), Positives = 134/196 (68%), Gaps = 3/196 (1%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR
Sbjct: 196 IGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLR 255
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE
Sbjct: 256 VALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPE 315
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLV 531
+ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+
Sbjct: 316 TMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIA 375
Query: 532 MKGVECTNFVNAFAIM 579
K TN+VNAFAIM
Sbjct: 376 YKEATVTNYVNAFAIM 391
[4][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 209 bits (532), Expect = 1e-52
Identities = 102/196 (52%), Positives = 134/196 (68%), Gaps = 3/196 (1%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR
Sbjct: 1006 IGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLR 1065
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE
Sbjct: 1066 VALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPE 1125
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVRPEG--TDKEFQMFVPSRVSNLV 531
+ESK E+YI+I GID+ P +C+QINY QRF WF ++RP K ++ +PSRV N+
Sbjct: 1126 TMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIA 1185
Query: 532 MKGVECTNFVNAFAIM 579
K TN+VNAFAIM
Sbjct: 1186 YKEATVTNYVNAFAIM 1201
[5][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 206 bits (523), Expect = 1e-51
Identities = 102/194 (52%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR
Sbjct: 195 IGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLR 254
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
+ +W + + + H + G IQ+ +TANFG GA+FW++PLS+P AP+
Sbjct: 255 VFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQ 313
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRP-EGTDKEFQMFVPSRVSNLVMK 537
VE+KFEFYIRI GID PDLC+QINYKQRFGWFM+ P + T E +PSR+ N+ +K
Sbjct: 314 TVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVK 373
Query: 538 GVECTNFVNAFAIM 579
+C NF NAFAIM
Sbjct: 374 NTKCVNFTNAFAIM 387
[6][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 205 bits (522), Expect = 2e-51
Identities = 102/195 (52%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLR
Sbjct: 195 VGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLR 254
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
I +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE
Sbjct: 255 IALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPE 314
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVM 534
VE+ E+YI+I GI++ P LC++INYKQRF W ++ K ++ +PSR+ NL
Sbjct: 315 TVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSS 374
Query: 535 KGVECTNFVNAFAIM 579
K V+ TNFVNA AI+
Sbjct: 375 KHVKVTNFVNALAIL 389
[7][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 205 bits (522), Expect = 2e-51
Identities = 102/195 (52%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLR
Sbjct: 1032 VGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLR 1091
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
I +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE
Sbjct: 1092 IALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPE 1151
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDK--EFQMFVPSRVSNLVM 534
VE+ E+YI+I GI++ P LC++INYKQRF W ++ K ++ +PSR+ NL
Sbjct: 1152 TVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSS 1211
Query: 535 KGVECTNFVNAFAIM 579
K V+ TNFVNA AI+
Sbjct: 1212 KHVKVTNFVNALAIL 1226
[8][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 205 bits (521), Expect = 2e-51
Identities = 94/195 (48%), Positives = 135/195 (69%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT+ T +P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR
Sbjct: 1028 IGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLR 1087
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
+ +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE
Sbjct: 1088 VALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPE 1147
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVM 534
+E+ F++YI IHGI+++ LC++INY Q F WFM+ T + +P+R++NL
Sbjct: 1148 TMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTS 1207
Query: 535 KGVECTNFVNAFAIM 579
K V+ TNFVNA AIM
Sbjct: 1208 KEVQVTNFVNALAIM 1222
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 202 bits (515), Expect = 1e-50
Identities = 96/195 (49%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LR
Sbjct: 195 VGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLR 254
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
I +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE
Sbjct: 255 IALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPE 314
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVM 534
+E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL
Sbjct: 315 TMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTS 374
Query: 535 KGVECTNFVNAFAIM 579
K V+ TNFVNA AIM
Sbjct: 375 KEVQITNFVNALAIM 389
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 202 bits (515), Expect = 1e-50
Identities = 96/195 (49%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LR
Sbjct: 1027 VGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLR 1086
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
I +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE
Sbjct: 1087 IALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPE 1146
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVR--PEGTDKEFQMFVPSRVSNLVM 534
+E+ F++YI IHGI + +LC++INY Q F WFM+ T + +P+R++NL
Sbjct: 1147 TMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTS 1206
Query: 535 KGVECTNFVNAFAIM 579
K V+ TNFVNA AIM
Sbjct: 1207 KEVQITNFVNALAIM 1221
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 109 bits (272), Expect = 2e-22
Identities = 59/193 (30%), Positives = 98/193 (50%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
LG T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL
Sbjct: 208 LGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLH 266
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
I +W + H D G + +L I+ FY+++ +G GA + L SPM+P
Sbjct: 267 ISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPN 326
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKG 540
+++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L +
Sbjct: 327 AIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESED 386
Query: 541 VECTNFVNAFAIM 579
++ T + NAF M
Sbjct: 387 MKVTGYTNAFLQM 399
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 107 bits (268), Expect = 5e-22
Identities = 60/193 (31%), Positives = 98/193 (50%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
LG T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + R
Sbjct: 196 LGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSR 254
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
I +W I H D G + +L I+ FY+++ +G GA V L SPM+P
Sbjct: 255 ISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPN 314
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKG 540
+++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L +
Sbjct: 315 AIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESED 374
Query: 541 VECTNFVNAFAIM 579
++ T + NAF M
Sbjct: 375 MKVTGYTNAFLQM 387
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 107 bits (268), Expect = 5e-22
Identities = 60/193 (31%), Positives = 98/193 (50%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
LG T +PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + R
Sbjct: 879 LGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSR 937
Query: 181 IIIWGTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPE 360
I +W I H D G + +L I+ FY+++ +G GA V L SPM+P
Sbjct: 938 ISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPN 997
Query: 361 KVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKG 540
+++ F+ +I G +C+ IN+ QRFGWF V P + ++ + ++L +
Sbjct: 998 AIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESED 1057
Query: 541 VECTNFVNAFAIM 579
++ T + NAF M
Sbjct: 1058 MKVTGYTNAFLQM 1070
[14][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 61.2 bits (147), Expect = 6e-08
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Frame = +1
Query: 61 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 231
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 232 HCDIVEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 408
C I GG +RIQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 409 SQPD-LCKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFA 573
+ D + I F W + FQ +P+R+S+LV+ G T NA A
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALA 430
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 79 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.6 bits (135), Expect = 1e-06
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +1
Query: 82 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 255
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 256 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 423
E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350
Query: 424 CKQINYKQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECT 552
F ++P+ +P + + K T
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[17][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 56.6 bits (135), Expect = 1e-06
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Frame = +1
Query: 1 LGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 180
L T A+T L A ++G E + I+S + G GT + + V C L
Sbjct: 463 LATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGEIIKVGTAQVQCDLL 522
Query: 181 IIIWGT-TP--TIAQTGQMPHCDIVEGGSGE--LRIQSPFYSTANFGSEGAQFWVIPLSS 345
I + + TP Q + PH +++GG GE LRI +P + A+F S G ++ +
Sbjct: 523 IYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAP-EAIASFHSGGVFLHIVVAAG 580
Query: 346 PMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVRP--EGTDKEFQMFVPSRV 519
P AP+ V + FEF + IDS + + + F W + +GT + +PSR
Sbjct: 581 PTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSWVTLSAFLQGT---ATILLPSRP 637
Query: 520 SNLVMKG 540
+ + G
Sbjct: 638 ATITRFG 644
[18][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 56.2 bits (134), Expect = 2e-06
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 7/165 (4%)
Frame = +1
Query: 79 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 426
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 427 KQINYKQRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECT 552
+ + + WF ++P+ +P + + K T
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVT 393
[19][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 79 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335
[20][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 79 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923
[21][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +1
Query: 79 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 252
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 253 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 396
G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337