BB906083 ( RCE04246 )

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[1][TOP]
>UniRef100_B7FJV6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Medicago
           truncatula RepID=B7FJV6_MEDTR
          Length = 274

 Score =  320 bits (821), Expect = 4e-86
 Identities = 164/189 (86%), Positives = 175/189 (92%), Gaps = 1/189 (0%)
 Frame = +2

Query: 14  MVSQALSVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFR 193
           MVSQALSVPA PTFTIASHRRIPSQLAFSHRN CTI+SS  SPYG SS++GLSSKT  FR
Sbjct: 1   MVSQALSVPATPTFTIASHRRIPSQLAFSHRNPCTIASSFHSPYGSSSQIGLSSKTHGFR 60

Query: 194 LKLDEKTTHDVSTTSYGAIEA-SGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQ 370
           LKLDEK+THDV T SYG IEA +GNPP++PAIMTPGGALDLSSVLFRNRIIFIGQP+N Q
Sbjct: 61  LKLDEKSTHDVGT-SYGVIEAKTGNPPITPAIMTPGGALDLSSVLFRNRIIFIGQPVNSQ 119

Query: 371 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQ 550
           VAQRVISQL+TLATID ++DILMYINCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQ
Sbjct: 120 VAQRVISQLVTLATIDPDADILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQ 179

Query: 551 GTLLLAGGE 577
           GTLLLAGGE
Sbjct: 180 GTLLLAGGE 188

[2][TOP]
>UniRef100_Q9FY07 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1
           Tax=Pisum sativum RepID=Q9FY07_PEA
          Length = 246

 Score =  303 bits (776), Expect = 6e-81
 Identities = 153/183 (83%), Positives = 165/183 (90%), Gaps = 1/183 (0%)
 Frame = +2

Query: 32  SVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFRLKLDEK 211
           SVPA PTFTIASH +IPS+LAFSHRN CTI+SSLPSPY HSSK+GLSSK   FRLK DEK
Sbjct: 1   SVPAFPTFTIASHTKIPSKLAFSHRNPCTIASSLPSPYVHSSKIGLSSKAHGFRLKFDEK 60

Query: 212 TTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVI 388
            THDVST SYG IEA  GNPP+SPA+MTPGGA+DLSSVLFRNRIIFIGQPIN Q+AQRVI
Sbjct: 61  NTHDVST-SYGVIEAKKGNPPISPAVMTPGGAIDLSSVLFRNRIIFIGQPINAQMAQRVI 119

Query: 389 SQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLA 568
           SQL+TLATID ++DILMYINC GGSTYSVLA+YDCMSWIKPKVGTV FGVAASQ TLLLA
Sbjct: 120 SQLVTLATIDPDADILMYINCAGGSTYSVLAVYDCMSWIKPKVGTVCFGVAASQATLLLA 179

Query: 569 GGE 577
           GGE
Sbjct: 180 GGE 182

[3][TOP]
>UniRef100_C6T9Q7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Glycine max
           RepID=C6T9Q7_SOYBN
          Length = 273

 Score =  299 bits (765), Expect = 1e-79
 Identities = 151/188 (80%), Positives = 164/188 (87%)
 Frame = +2

Query: 14  MVSQALSVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFR 193
           MV QALSVPA  +FTIAS  R PS L FSHRN C+I+SSLP+PYGHSS +GLSSK+  F 
Sbjct: 1   MVPQALSVPASASFTIASRTRSPSHLVFSHRNPCSIASSLPNPYGHSSGVGLSSKSRGFP 60

Query: 194 LKLDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQV 373
           LKLDEK  H  ST SYGAIEA GNPP++PA+MTPGG LDLSSVLFRNRIIFIGQP+N QV
Sbjct: 61  LKLDEKNIHGAST-SYGAIEAKGNPPITPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSQV 119

Query: 374 AQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQG 553
           AQRVISQL+TLATIDE +DIL+YINCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG
Sbjct: 120 AQRVISQLVTLATIDENADILVYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 179

Query: 554 TLLLAGGE 577
            LLLAGGE
Sbjct: 180 ALLLAGGE 187

[4][TOP]
>UniRef100_C6TLL0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Glycine max
           RepID=C6TLL0_SOYBN
          Length = 273

 Score =  284 bits (726), Expect = 4e-75
 Identities = 143/188 (76%), Positives = 159/188 (84%)
 Frame = +2

Query: 14  MVSQALSVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFR 193
           MV QALSVPA  +  IAS  R PS L FS RN C+I+SSLP+PYGHSS++GLSSK+  F 
Sbjct: 1   MVPQALSVPASSSLAIASRTRSPSHLVFSQRNPCSIASSLPNPYGHSSEVGLSSKSRGFP 60

Query: 194 LKLDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQV 373
           LK DEK  H  ST SYG IEA GNPP++PA+MTPGG LDL+SVLFRNRIIFIGQP+N QV
Sbjct: 61  LKHDEKNIHGAST-SYGTIEAKGNPPITPAVMTPGGPLDLTSVLFRNRIIFIGQPVNSQV 119

Query: 374 AQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQG 553
           AQRVISQL+TLATI+E +DIL+YINCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG
Sbjct: 120 AQRVISQLVTLATINENADILVYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 179

Query: 554 TLLLAGGE 577
            L LAGGE
Sbjct: 180 ALFLAGGE 187

[5][TOP]
>UniRef100_B9RZA8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus
           communis RepID=B9RZA8_RICCO
          Length = 277

 Score =  228 bits (580), Expect = 3e-58
 Identities = 130/193 (67%), Positives = 149/193 (77%), Gaps = 5/193 (2%)
 Frame = +2

Query: 14  MVSQALSVPAIPTFTIAS-HRRIPSQLAFS-HRNSCT--ISSSLPSPYGHSSKMGLSSKT 181
           +V+ A++ P   +F+I S ++ +PS  + S HR S    +SS   SPY  SS  GLSS+ 
Sbjct: 2   VVASAITAPV--SFSIFSTNKTLPSVSSSSFHRVSARFIVSSLNSSPYRDSSIGGLSSRR 59

Query: 182 SDFRLKLDEKTTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQP 358
           S   L +DEK +H  +T SY  IEA  GNPP+ PA+MTPGG LDL SVLFRNRIIFIGQP
Sbjct: 60  SGLPLSIDEKNSHR-ATQSYITIEAKKGNPPIMPAVMTPGGPLDLQSVLFRNRIIFIGQP 118

Query: 359 INGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGV 538
           IN QVAQRVISQL+TLATIDE SDILMY+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGV
Sbjct: 119 INSQVAQRVISQLVTLATIDENSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGV 178

Query: 539 AASQGTLLLAGGE 577
           AASQG LLLAGGE
Sbjct: 179 AASQGALLLAGGE 191

[6][TOP]
>UniRef100_Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic n=1
           Tax=Arabidopsis thaliana RepID=CLPP6_ARATH
          Length = 271

 Score =  224 bits (570), Expect = 5e-57
 Identities = 124/191 (64%), Positives = 142/191 (74%), Gaps = 3/191 (1%)
 Frame = +2

Query: 14  MVSQALSVPAIPTFTIASHRRIPSQ-LAFSHRNSCT-ISSSLPSPYGHSSKMGLSSKTSD 187
           M   A+S P   +F+  +    P+  L+ + RN    I S+L SPYG S K GLSS  S 
Sbjct: 1   MAGLAISPPLGLSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSG 60

Query: 188 FRLKLDEKTTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPIN 364
             +K+D K         +G IEA  GNPPV P++MTPGG LDLSSVLFRNRIIFIGQPIN
Sbjct: 61  SPIKIDNKAPR------FGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPIN 114

Query: 365 GQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAA 544
            QVAQRVISQL+TLA+ID++SDILMY+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAA
Sbjct: 115 AQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAA 174

Query: 545 SQGTLLLAGGE 577
           SQG LLLAGGE
Sbjct: 175 SQGALLLAGGE 185

[7][TOP]
>UniRef100_A9PDP3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus
           trichocarpa RepID=A9PDP3_POPTR
          Length = 265

 Score =  221 bits (564), Expect = 2e-56
 Identities = 120/187 (64%), Positives = 141/187 (75%), Gaps = 1/187 (0%)
 Frame = +2

Query: 20  SQALSVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFRLK 199
           + A+S PA  +F+I    + PS   FSHR +  +S+ LP PY  SS        +   L+
Sbjct: 4   ASAISAPAT-SFSIFPRAKSPSLSLFSHRRNSVVSA-LPRPYSDSS--------TRLSLR 53

Query: 200 LDEKTTHDVSTTSYGAIEASG-NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVA 376
           +DEK   D    SY  +EA G NPP+ PA+MTPGG +DLSSVLFRNRIIFIGQPIN QVA
Sbjct: 54  IDEKGFRDAKQ-SYVTVEAKGGNPPIMPAVMTPGGPMDLSSVLFRNRIIFIGQPINSQVA 112

Query: 377 QRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGT 556
           QRVISQL+TLATIDE++DIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG 
Sbjct: 113 QRVISQLVTLATIDEKTDILLYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 172

Query: 557 LLLAGGE 577
           LLL+GGE
Sbjct: 173 LLLSGGE 179

[8][TOP]
>UniRef100_UPI0001982E3F PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001982E3F
          Length = 269

 Score =  221 bits (563), Expect = 3e-56
 Identities = 123/189 (65%), Positives = 142/189 (75%), Gaps = 1/189 (0%)
 Frame = +2

Query: 14  MVSQALSVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFR 193
           MV+ A+S     + +I S     S   FS R S   +  + S    SS +GLSSKTS   
Sbjct: 1   MVASAISTTL--SSSIVSRNTSSSISFFSPRYS---TKPIVSALSKSSSIGLSSKTSGLS 55

Query: 194 LKLDEKTTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQ 370
           LK+DE+  H     SYGAIEA  GNPPV+P++MTPGG LDLS+VLFR+RIIFIGQPIN  
Sbjct: 56  LKVDERGRH-AGNPSYGAIEAKKGNPPVAPSVMTPGGPLDLSTVLFRSRIIFIGQPINSM 114

Query: 371 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQ 550
           VAQRVISQL+TLA IDE++DILMY+NCPGGSTYSVLAIYDCM+WIKPKVGTV FGVAASQ
Sbjct: 115 VAQRVISQLVTLAAIDEDADILMYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQ 174

Query: 551 GTLLLAGGE 577
           G LLLAGGE
Sbjct: 175 GALLLAGGE 183

[9][TOP]
>UniRef100_A5C6M7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitis
           vinifera RepID=A5C6M7_VITVI
          Length = 229

 Score =  211 bits (536), Expect = 4e-53
 Identities = 108/139 (77%), Positives = 119/139 (85%), Gaps = 1/139 (0%)
 Frame = +2

Query: 164 GLSSKTSDFRLKLDEKTTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRNRI 340
           GLSSKTS   LK+D    H     SYGAIEA  GNPPV+P++MTPGG LDLS+VLFR+RI
Sbjct: 6   GLSSKTSGLSLKVDGXGRH-AGNPSYGAIEAKKGNPPVAPSVMTPGGPLDLSTVLFRSRI 64

Query: 341 IFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVG 520
           IFIGQPIN  VAQRVISQL+TLA IDE++DILMY+NCPGGSTYSVLAIYDCM+WIKPKVG
Sbjct: 65  IFIGQPINSMVAQRVISQLVTLAAIDEDADILMYLNCPGGSTYSVLAIYDCMAWIKPKVG 124

Query: 521 TVVFGVAASQGTLLLAGGE 577
           TV FGVAASQG LLLAGGE
Sbjct: 125 TVCFGVAASQGALLLAGGE 143

[10][TOP]
>UniRef100_Q42886 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Solanum
           lycopersicum RepID=Q42886_SOLLC
          Length = 275

 Score =  210 bits (534), Expect = 7e-53
 Identities = 115/190 (60%), Positives = 137/190 (72%), Gaps = 2/190 (1%)
 Frame = +2

Query: 14  MVSQALSVPAIPTFTIASHRRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFR 193
           MV+ A++  +I   + + H+   S L  S      + S L SPY  SS +G SSK     
Sbjct: 1   MVTSAIAGTSIVPVS-SRHQTSFSSLLSSRSLRKNVVSVLRSPYSDSSDIGFSSKKLGIP 59

Query: 194 LKLDEKTTHDVSTTSYGAIEAS--GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPING 367
           LK +E  +   + +SYG I A    NPP+ PA+MTP GALDLS+VLFRNRIIFIGQP+N 
Sbjct: 60  LKFNEYESGAHTNSSYGVIVAKEGANPPIMPAVMTPVGALDLSTVLFRNRIIFIGQPVNS 119

Query: 368 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 547
            VAQ+VISQL+TLATIDE +DIL+Y+NCPGGSTYSVLAIYDCMSWIKPKVGTV FG AAS
Sbjct: 120 AVAQKVISQLVTLATIDENADILIYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGAAAS 179

Query: 548 QGTLLLAGGE 577
           QG LLLAGGE
Sbjct: 180 QGALLLAGGE 189

[11][TOP]
>UniRef100_B9HRQ3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus
           trichocarpa RepID=B9HRQ3_POPTR
          Length = 246

 Score =  205 bits (522), Expect = 2e-51
 Identities = 119/187 (63%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
 Frame = +2

Query: 20  SQALSVPAIPTFTIASHRRIPSQLAFSH-RNSCTISSSLPSPYGHSSKMGLSSKTSDFRL 196
           + A+S PA   F+I+S  + PS   FSH RNS  + S+LP P   SS             
Sbjct: 4   ASAMSAPAA-IFSISSRTKPPSLSIFSHGRNS--VVSALPRPSSDSS------------- 47

Query: 197 KLDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVA 376
                       TS  A    GNPP+ PA+MTPGG LDLSSVLFRNRIIFIGQPIN QVA
Sbjct: 48  ------------TSLKA--RGGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSQVA 93

Query: 377 QRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGT 556
           QRVISQL+TLATIDE +DILMY+NCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQG 
Sbjct: 94  QRVISQLVTLATIDENADILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 153

Query: 557 LLLAGGE 577
           LLLAGGE
Sbjct: 154 LLLAGGE 160

[12][TOP]
>UniRef100_O49081 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Fritillaria
           agrestis RepID=O49081_FRIAG
          Length = 267

 Score =  201 bits (510), Expect = 4e-50
 Identities = 102/141 (72%), Positives = 116/141 (82%), Gaps = 1/141 (0%)
 Frame = +2

Query: 158 KMGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEAS-GNPPVSPAIMTPGGALDLSSVLFRN 334
           + G+   T+   LKL +  +   ++     IEA  GNPP+ PA+MTPGG LDLSSVLFRN
Sbjct: 41  RCGMFGGTNALPLKLTDPASCHSASRYDAVIEAKRGNPPMMPAVMTPGGPLDLSSVLFRN 100

Query: 335 RIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPK 514
           RIIFIGQP+N QVAQRVISQL+TLATIDEESDIL+Y+NCPGGSTYS+LAIYDCMSWIKPK
Sbjct: 101 RIIFIGQPVNSQVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPK 160

Query: 515 VGTVVFGVAASQGTLLLAGGE 577
           VGTV FGVAASQG LLLAGGE
Sbjct: 161 VGTVCFGVAASQGALLLAGGE 181

[13][TOP]
>UniRef100_C7AE92 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Triticum
           aestivum RepID=C7AE92_WHEAT
          Length = 266

 Score =  180 bits (456), Expect = 8e-44
 Identities = 105/183 (57%), Positives = 120/183 (65%), Gaps = 4/183 (2%)
 Frame = +2

Query: 41  AIPTFTIASHRRIPSQLAFSHRNS--CTISSSLPSPYGHSSKMGLSSKTSDFRLKLDEKT 214
           AIPT   A   R      FSH +S  C+  S            GL   TS    +LDE+ 
Sbjct: 2   AIPT---ALAVRASPSCQFSHSSSFACSPLSRRNGSSASRRLRGLQVLTSGVSARLDERI 58

Query: 215 THDVSTTSYGAIEASGN--PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVI 388
            H  S T    I AS N  PP+ PAIMTPGG LDL++VL  NRIIFIGQ +N QVAQRVI
Sbjct: 59  -HSQSYTRKNTIVASENENPPLMPAIMTPGGPLDLATVLLGNRIIFIGQYVNSQVAQRVI 117

Query: 389 SQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLA 568
           SQL+TL+ IDEE DIL+Y+NCPGGS YS+LAIYDCMSWI PKVGTV FGV ASQ  ++LA
Sbjct: 118 SQLVTLSAIDEEGDILIYLNCPGGSLYSILAIYDCMSWISPKVGTVCFGVVASQAAIILA 177

Query: 569 GGE 577
           GGE
Sbjct: 178 GGE 180

[14][TOP]
>UniRef100_Q852G0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oryza sativa
           Japonica Group RepID=Q852G0_ORYSJ
          Length = 259

 Score =  178 bits (451), Expect = 3e-43
 Identities = 101/171 (59%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
 Frame = +2

Query: 71  RRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGAI 250
           R  P++L    R+      +LP P       G+SSK       LDE+  H  S+     I
Sbjct: 13  RASPTRLLSRRRSGAKSGVALPGP--QFVPPGISSK-------LDERI-HCHSSLRKNTI 62

Query: 251 EASGN--PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
            AS N  PP+ PAIMTP GALDL++VL  NRIIFIGQ IN QVAQRVISQL+TLA +DEE
Sbjct: 63  VASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAVDEE 122

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           +DIL+Y+NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ  ++LAGGE
Sbjct: 123 ADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGE 173

[15][TOP]
>UniRef100_B6TX73 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
           RepID=B6TX73_MAIZE
          Length = 292

 Score =  174 bits (442), Expect = 3e-42
 Identities = 84/105 (80%), Positives = 94/105 (89%)
 Frame = +2

Query: 263 NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMY 442
           NPP+ PAIMTPGGALDL++VL  NRIIFIGQ IN QVAQRVISQL+TLA IDEE+DIL+Y
Sbjct: 102 NPPLMPAIMTPGGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAIDEEADILIY 161

Query: 443 INCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           +NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ  ++LAGGE
Sbjct: 162 LNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGE 206

[16][TOP]
>UniRef100_B4FA93 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
           RepID=B4FA93_MAIZE
          Length = 292

 Score =  174 bits (442), Expect = 3e-42
 Identities = 84/105 (80%), Positives = 94/105 (89%)
 Frame = +2

Query: 263 NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMY 442
           NPP+ PAIMTPGGALDL++VL  NRIIFIGQ IN QVAQRVISQL+TLA IDEE+DIL+Y
Sbjct: 102 NPPLMPAIMTPGGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAIDEEADILIY 161

Query: 443 INCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           +NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ  ++LAGGE
Sbjct: 162 LNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGE 206

[17][TOP]
>UniRef100_C5XV47 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum
           bicolor RepID=C5XV47_SORBI
          Length = 276

 Score =  174 bits (440), Expect = 6e-42
 Identities = 82/105 (78%), Positives = 94/105 (89%)
 Frame = +2

Query: 263 NPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMY 442
           NPP+ PAIMTPGGALDL++VL  NR+IFIGQ IN QVAQRVISQL+TLA +DEE+DIL+Y
Sbjct: 86  NPPLMPAIMTPGGALDLATVLLGNRVIFIGQYINSQVAQRVISQLVTLAAVDEEADILIY 145

Query: 443 INCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           +NCPGGS YS+LAIYDCMSWIKPKVGTV FGV ASQ  ++LAGGE
Sbjct: 146 LNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGE 190

[18][TOP]
>UniRef100_B9F8Z4 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Oryza sativa
           RepID=B9F8Z4_ORYSJ
          Length = 278

 Score =  166 bits (421), Expect = 9e-40
 Identities = 101/190 (53%), Positives = 119/190 (62%), Gaps = 21/190 (11%)
 Frame = +2

Query: 71  RRIPSQLAFSHRNSCTISSSLPSPYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGAI 250
           R  P++L    R+      +LP P       G+SSK       LDE+  H  S+     I
Sbjct: 13  RASPTRLLSRRRSGAKSGVALPGP--QFVPPGISSK-------LDERI-HCHSSLRKNTI 62

Query: 251 EASGN--PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
            AS N  PP+ PAIMTP GALDL++VL  NRIIFIGQ IN QVAQRVISQL+TLA +DEE
Sbjct: 63  VASENENPPLMPAIMTPAGALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAVDEE 122

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSW-------------------IKPKVGTVVFGVAAS 547
           +DIL+Y+NCPGGS YS+LAIYDCMSW                   IKPKVGTV FGV AS
Sbjct: 123 ADILIYLNCPGGSLYSILAIYDCMSWYILDMSICHAETVLIGFGLIKPKVGTVCFGVVAS 182

Query: 548 QGTLLLAGGE 577
           Q  ++LAGGE
Sbjct: 183 QAAIILAGGE 192

[19][TOP]
>UniRef100_A9TH43 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9TH43_PHYPA
          Length = 201

 Score =  158 bits (400), Expect = 3e-37
 Identities = 71/106 (66%), Positives = 90/106 (84%)
 Frame = +2

Query: 260 GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           G PP+ PA++TP G +DLS+++FRNRIIF+G P+N +VAQ V+S+LLTLA I++E +I M
Sbjct: 10  GAPPMMPAVLTPSGPVDLSTLMFRNRIIFVGSPVNSEVAQSVVSKLLTLAAINDEEEIKM 69

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           YINCPGGSTYS++AIYD M WIKP V TV FG+AASQG LLLAGG+
Sbjct: 70  YINCPGGSTYSIMAIYDAMQWIKPDVSTVCFGIAASQGALLLAGGK 115

[20][TOP]
>UniRef100_A9SWP4 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1
           Tax=Physcomitrella patens subsp. patens
           RepID=A9SWP4_PHYPA
          Length = 195

 Score =  154 bits (389), Expect = 5e-36
 Identities = 70/106 (66%), Positives = 89/106 (83%)
 Frame = +2

Query: 260 GNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           G PP+ PA++TP G +DLS+++FRNRIIF+G  +N +VAQ VIS+LLTLA I++E +I M
Sbjct: 4   GAPPMMPAVLTPSGPVDLSTLMFRNRIIFVGSSVNSEVAQSVISKLLTLAAINDEEEIKM 63

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           YINCPGGSTYS++AI+D M WIKP V TV FG+AASQG LLLAGG+
Sbjct: 64  YINCPGGSTYSIMAIFDAMQWIKPDVSTVCFGIAASQGALLLAGGK 109

[21][TOP]
>UniRef100_B0JL95 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microcystis
           aeruginosa NIES-843 RepID=B0JL95_MICAN
          Length = 233

 Score =  101 bits (252), Expect = 4e-20
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = +2

Query: 272 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           V P ++   G    A D+ S L R RI+F+G P++ QVA  +++QLL L   D E DI +
Sbjct: 31  VLPVVIEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQL 90

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL GG
Sbjct: 91  YINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGG 135

[22][TOP]
>UniRef100_A8YMD7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microcystis
           aeruginosa PCC 7806 RepID=A8YMD7_MICAE
          Length = 233

 Score =  101 bits (252), Expect = 4e-20
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = +2

Query: 272 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           V P ++   G    A D+ S L R RI+F+G P++ QVA  +++QLL L   D E DI +
Sbjct: 31  VLPVVIEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQL 90

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL GG
Sbjct: 91  YINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGG 135

[23][TOP]
>UniRef100_B1WUD3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece
           sp. ATCC 51142 RepID=B1WUD3_CYAA5
          Length = 229

 Score =  100 bits (250), Expect = 6e-20
 Identities = 56/123 (45%), Positives = 75/123 (60%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H +S+     I A+    V P ++   G    A D+ S L R RI+F+G P++ QVA  +
Sbjct: 9   HTISSKRPSEIYATAKNVV-PMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSI 67

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           ++QLL L   D E DI +YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL
Sbjct: 68  VAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLL 127

Query: 566 AGG 574
           +GG
Sbjct: 128 SGG 130

[24][TOP]
>UniRef100_C7QW49 ATP-dependent Clp protease, proteolytic subunit ClpP n=2
           Tax=Cyanothece RepID=C7QW49_CYAP0
          Length = 229

 Score =  100 bits (250), Expect = 6e-20
 Identities = 52/105 (49%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
 Frame = +2

Query: 272 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           V P ++   G    A D+ S L R RI+F+G P++ QVA  +++QLL L   D E DI +
Sbjct: 26  VVPMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 85

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL GG
Sbjct: 86  YINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGG 130

[25][TOP]
>UniRef100_Q59993 ATP-dependent Clp protease proteolytic subunit 2 n=1
           Tax=Synechocystis sp. PCC 6803 RepID=CLPP2_SYNY3
          Length = 226

 Score =  100 bits (249), Expect = 8e-20
 Identities = 53/105 (50%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
 Frame = +2

Query: 272 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           V P ++   G    A D+ S L R RIIF+G P++ QVA  +++QLL L   D E DI +
Sbjct: 23  VVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 82

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL+GG
Sbjct: 83  YINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGG 127

[26][TOP]
>UniRef100_Q4C1E0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Crocosphaera
           watsonii WH 8501 RepID=Q4C1E0_CROWT
          Length = 262

 Score =  100 bits (248), Expect = 1e-19
 Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
 Frame = +2

Query: 272 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           V P ++   G    A D+ S L R RI+F+G P++ QVA  +++QLL L   D E DI +
Sbjct: 59  VVPMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQL 118

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL+GG
Sbjct: 119 YINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGG 163

[27][TOP]
>UniRef100_A3IU92 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece
           sp. CCY0110 RepID=A3IU92_9CHRO
          Length = 201

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 49/91 (53%), Positives = 63/91 (69%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+G P++ QVA  +++QLL L   D E DI +YIN PGGS Y+ LA
Sbjct: 12  AFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQIYINSPGGSVYAGLA 71

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I+P V T+ FG+AAS G  LL+GG
Sbjct: 72  IYDTMQQIRPDVVTICFGLAASMGAFLLSGG 102

[28][TOP]
>UniRef100_A4ISQ2 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Geobacillus
           RepID=CLPP_GEOTN
          Length = 196

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 51/91 (56%), Positives = 63/91 (69%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G PI+ QVA  ++SQLL LA  D E DI +YIN PGGS  + LA
Sbjct: 17  AYDIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G  LLA G
Sbjct: 77  IYDTMQFIKPDVSTICIGMAASMGAFLLAAG 107

[29][TOP]
>UniRef100_Q7V9L6 ATP-dependent Clp protease proteolytic subunit 3 n=1
           Tax=Prochlorococcus marinus RepID=CLPP3_PROMA
          Length = 216

 Score = 99.4 bits (246), Expect = 2e-19
 Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 367
           ++ K  H V     G +  SG P V P ++   G    A D+ S L R RIIF+G  +N 
Sbjct: 2   INTKCIHPVQNKWKGDLPCSG-PGVLPTVIEQSGRGERAFDIYSRLLRERIIFLGTDVND 60

Query: 368 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 547
           Q+A  +++Q+L L   D E DI +YIN PGGS  + LAIYD M  + P + T+ +G+AAS
Sbjct: 61  QIADALVAQMLFLEAEDPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAAS 120

Query: 548 QGTLLLAGG 574
            G  LLAGG
Sbjct: 121 MGAFLLAGG 129

[30][TOP]
>UniRef100_C0GEZ2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dethiobacter
           alkaliphilus AHT 1 RepID=C0GEZ2_9FIRM
          Length = 193

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 51/91 (56%), Positives = 64/91 (70%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIFIG PI+  VA  VI+QLL L + D E DI +Y+N PGGS Y+ LA
Sbjct: 17  AYDIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDINIYVNSPGGSVYAGLA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G +LLA G
Sbjct: 77  IYDTMQYIKPDVSTICVGLAASMGAVLLAAG 107

[31][TOP]
>UniRef100_Q8KC73 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Chlorobaculum tepidum RepID=CLPP_CHLTE
          Length = 225

 Score = 99.0 bits (245), Expect = 2e-19
 Identities = 56/123 (45%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H       GAIE S N  + P ++   G    A D+ S L R RIIF+G PI+  VA  +
Sbjct: 10  HHAKKLYSGAIENSINSQLVPMVIETSGRGERAFDIFSRLLRERIIFLGSPIDEHVAGLI 69

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           I+QL+ L + D E DI +YIN PGGS  + L IYD M +I+P + TV  G+AAS G  LL
Sbjct: 70  IAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLL 129

Query: 566 AGG 574
           A G
Sbjct: 130 ASG 132

[32][TOP]
>UniRef100_A2U459 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polaribacter
           sp. MED152 RepID=A2U459_9FLAO
          Length = 219

 Score = 98.6 bits (244), Expect = 3e-19
 Identities = 53/120 (44%), Positives = 72/120 (60%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 397
           H +S+TSY  I +S  P +          +D+ S L  +RIIF+G  IN QVA  + +QL
Sbjct: 15  HGISSTSYTKITSSLTPYIMEERQMNITQMDVFSRLMMDRIIFLGTGINDQVANIIQAQL 74

Query: 398 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           L L ++D   DI +YIN PGG  Y+ L IYD M +IKP V T+  G+AAS G +L+  GE
Sbjct: 75  LFLESVDANKDISIYINSPGGGVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLMCAGE 134

[33][TOP]
>UniRef100_Q5KVD9 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Geobacillus
           RepID=CLPP_GEOKA
          Length = 196

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 49/91 (53%), Positives = 63/91 (69%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RI+F+G PI+ QVA  ++SQLL LA  D + DI +YIN PGGS  + LA
Sbjct: 17  AYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDISLYINSPGGSITAGLA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G  LLA G
Sbjct: 77  IYDTMQFIKPDVSTICIGMAASMGAFLLAAG 107

[34][TOP]
>UniRef100_A4BWM1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Polaribacter
           irgensii 23-P RepID=A4BWM1_9FLAO
          Length = 220

 Score = 97.4 bits (241), Expect = 7e-19
 Identities = 52/120 (43%), Positives = 72/120 (60%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 397
           H +S+T+Y  I +S  P +          +D+ S L  +RIIF+G  IN QVA  + +QL
Sbjct: 15  HGISSTNYTKITSSLTPYIMEERQMNITQMDVFSRLMMDRIIFLGTGINDQVANIIQAQL 74

Query: 398 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           L L ++D   DI +YIN PGG  Y+ L IYD M +IKP V T+  G+AAS G +L+  GE
Sbjct: 75  LFLESVDANKDISIYINSPGGGVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLMCAGE 134

[35][TOP]
>UniRef100_B3QL40 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QL40_CHLP8
          Length = 225

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H       GAIE S N  + P ++   G    A D+ S L R RIIF+G PI+  VA  +
Sbjct: 10  HHAKKLYSGAIENSINNQLVPMVIETSGRGERAFDIFSRLLRERIIFLGSPIDEHVAGLI 69

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           ++QL+ L + D E DI +Y+N PGGS  + L IYD M +I+P + TV  G+AAS G  LL
Sbjct: 70  MAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLL 129

Query: 566 AGG 574
           A G
Sbjct: 130 ASG 132

[36][TOP]
>UniRef100_C6QNT0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Geobacillus
           sp. Y4.1MC1 RepID=C6QNT0_9BACI
          Length = 196

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 50/91 (54%), Positives = 62/91 (68%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G PI+ QVA  ++SQLL LA  D E DI +YIN PGGS  + LA
Sbjct: 17  AYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G  LLA G
Sbjct: 77  IYDTMQFIKPDVSTICIGMAASMGAFLLAAG 107

[37][TOP]
>UniRef100_C5D7M9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Geobacillus
           sp. WCH70 RepID=CLPP_GEOSW
          Length = 196

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 50/91 (54%), Positives = 62/91 (68%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G PI+ QVA  ++SQLL LA  D E DI +YIN PGGS  + LA
Sbjct: 17  AYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGLA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G  LLA G
Sbjct: 77  IYDTMQFIKPDVSTICIGMAASMGAFLLAAG 107

[38][TOP]
>UniRef100_P54415 ATP-dependent Clp protease proteolytic subunit 1 n=2
           Tax=Synechococcus elongatus RepID=CLPP1_SYNE7
          Length = 197

 Score = 97.1 bits (240), Expect = 9e-19
 Identities = 48/91 (52%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+P+   VA R+++QLL L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M+ I+P V TV  G+AAS G  LLA G
Sbjct: 75  IFDTMNHIRPDVSTVCVGLAASMGAFLLAAG 105

[39][TOP]
>UniRef100_B7KBH8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece
           sp. PCC 7424 RepID=B7KBH8_CYAP7
          Length = 229

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
 Frame = +2

Query: 257 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
           SG   + P ++   G    A D+ S L R RI+F+G  I+  VA  +++QLL L   D E
Sbjct: 21  SGLQNILPVVIEQSGMGERAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPE 80

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            DI +YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL+GG
Sbjct: 81  KDIQIYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGG 130

[40][TOP]
>UniRef100_Q1VUI3 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VUI3_9FLAO
          Length = 224

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPG---------GALDLSSVLFRNRIIFIGQPINGQ 370
           H V+   Y  I  S    ++P+ MTP           A+D+ S L  +RIIF+G PIN Q
Sbjct: 15  HGVNANYYDKIITS----MTPSAMTPNIIEERQMNAVAMDVFSRLMMDRIIFLGLPINDQ 70

Query: 371 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQ 550
           VA  + +QLL L + D   DI +YIN PGGS Y+ L IYD M +IKP V T+  G+AAS 
Sbjct: 71  VANIIQAQLLFLESTDSSKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATINTGIAASM 130

Query: 551 GTLLLAGG 574
           G +LL  G
Sbjct: 131 GAVLLCAG 138

[41][TOP]
>UniRef100_Q05UN0 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. RS9916 RepID=Q05UN0_9SYNE
          Length = 229

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYG----AIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQ 355
           +D  ++H +     G    A+  S  P V P ++   G    A D+ S L R RIIF+G 
Sbjct: 2   IDASSSHPIQNRWTGIRPTAVMPSAAPGVLPTVVEQSGRGERAFDIYSRLLRERIIFLGT 61

Query: 356 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 535
            I+ QVA  +++QLL L   D E DI +YIN PGGS  + LAIYD M  + P V T+ +G
Sbjct: 62  GIDDQVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYG 121

Query: 536 VAASQGTLLLAGG 574
           +AAS G  LL+GG
Sbjct: 122 LAASMGAFLLSGG 134

[42][TOP]
>UniRef100_B2IT90 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2IT90_NOSP7
          Length = 232

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEASGNPP--VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPI 361
           + +   + +S  S   I +  N P  + P ++   G    A D+ S L R RIIF+G PI
Sbjct: 3   VSQSGNYPISNQSRININSQLNSPSNIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPI 62

Query: 362 NGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVA 541
           +  VA  +++QLL L + D E DI MY+N PGGS Y+ +AIYD +  I+P V T+ FG+A
Sbjct: 63  DDAVANSIVAQLLFLDSEDSEKDIQMYVNSPGGSVYAGMAIYDTIQQIRPDVVTICFGLA 122

Query: 542 ASQGTLLLAGG 574
           AS G  LL  G
Sbjct: 123 ASMGAFLLTAG 133

[43][TOP]
>UniRef100_A0ZER6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Nodularia
           spumigena CCY9414 RepID=A0ZER6_NODSP
          Length = 210

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 49/91 (53%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G PI+  VA  +++QLL L   D E DI +YIN PGGS Y+ +A
Sbjct: 21  AFDIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQIYINSPGGSVYAGMA 80

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I+P V T+ FG+AAS G  LLA G
Sbjct: 81  IYDTMQQIRPDVVTICFGLAASMGAFLLAAG 111

[44][TOP]
>UniRef100_B4AWU3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanothece
           sp. PCC 7822 RepID=B4AWU3_9CHRO
          Length = 228

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
 Frame = +2

Query: 257 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
           S    + P ++   G    A D+ S L R RI+F+G  I+  VA  +++QLL L   D E
Sbjct: 21  SSTQNIVPVVIEQSGMGERAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPE 80

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            DI +YIN PGGS Y+ LAIYD M  I+P V T+ FG+AAS G  LL+GG
Sbjct: 81  KDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGG 130

[45][TOP]
>UniRef100_A7HFV9 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Anaeromyxobacter sp. Fw109-5 RepID=CLPP_ANADF
          Length = 204

 Score = 95.1 bits (235), Expect = 3e-18
 Identities = 48/89 (53%), Positives = 62/89 (69%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RI+F+G PI+  VA  VI+QLL L + D + DI +YIN PGGS  S LAIY
Sbjct: 21  DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGLAIY 80

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M ++KP+V T+  G AAS G  LLAGG
Sbjct: 81  DTMQYVKPQVSTICLGQAASMGAFLLAGG 109

[46][TOP]
>UniRef100_C1ZVV0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rhodothermus
           marinus DSM 4252 RepID=C1ZVV0_RHOMR
          Length = 252

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 48/91 (52%), Positives = 62/91 (68%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RI+ IG PIN Q+A  V++QLL LA+ D E DI +YIN PGGS  S LA
Sbjct: 50  AYDIFSRLLKERIVIIGTPINDQIANLVVAQLLWLASEDSERDINIYINSPGGSIDSGLA 109

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           +YD M ++ P V T+  G+AAS G +LLA G
Sbjct: 110 VYDTMQYVAPPVATICVGLAASMGAVLLAAG 140

[47][TOP]
>UniRef100_A3YZS2 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. WH 5701 RepID=A3YZS2_9SYNE
          Length = 196

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 48/91 (52%), Positives = 58/91 (63%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+P+  + A RV++QLL L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEPVTAESANRVVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVQTVCVGLAASMGAFLLTAG 105

[48][TOP]
>UniRef100_Q8YQX8 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Nostoc sp.
           PCC 7120 RepID=CLPP2_ANASP
          Length = 232

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEA--SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPI 361
           + +   H +++ S   + +  +G   + P ++   G    A D+ S L R RIIF+G PI
Sbjct: 3   VSQSANHSINSLSRFGMSSHLNGIGNIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPI 62

Query: 362 NGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVA 541
           +  VA  +++QLL L   D E DI +YIN PGGS Y+ +AIYD +  I+P V T+ FG+A
Sbjct: 63  DDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLA 122

Query: 542 ASQGTLLLAGG 574
           AS G  LL  G
Sbjct: 123 ASMGAFLLTAG 133

[49][TOP]
>UniRef100_UPI0001874468 Clp protease n=1 Tax=Capnocytophaga sputigena ATCC 33612
           RepID=UPI0001874468
          Length = 219

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 54/138 (39%), Positives = 75/138 (54%)
 Frame = +2

Query: 161 MGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRI 340
           M LS +   + +K      H V++  Y  I  S  P +          +D+ S L  +RI
Sbjct: 1   MNLSDEFKKYAIK-----QHGVNSLYYDKIVGSMTPYIMEERQLNVAQMDVFSRLMMDRI 55

Query: 341 IFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVG 520
           IF+G  +N QVA  V +QLL L ++D   DI +YIN PGGS Y+ L +YD M +IKP V 
Sbjct: 56  IFLGTDVNDQVANIVTAQLLFLESVDSAKDIQIYINSPGGSVYAGLGMYDTMQFIKPDVA 115

Query: 521 TVVFGVAASQGTLLLAGG 574
           T+  G+AAS   +LL  G
Sbjct: 116 TICTGIAASMAAVLLCAG 133

[50][TOP]
>UniRef100_B4S457 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prosthecochloris aestuarii DSM 271
           RepID=B4S457_PROA2
          Length = 226

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
 Frame = +2

Query: 242 GAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 409
           GAIE      + P ++   G    A D+ S L R RIIF+G PI+  VA  +++QL+ L 
Sbjct: 18  GAIEQGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTPIDEHVASLLMAQLIFLE 77

Query: 410 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           + D E DI +YIN PGGS  + L IYD M +I+P+V TV  G+AAS G  LLA G
Sbjct: 78  SEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASG 132

[51][TOP]
>UniRef100_A9BJY4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Petrotoga
           mobilis SJ95 RepID=A9BJY4_PETMO
          Length = 205

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
 Frame = +2

Query: 269 PVSPAIMTPGG---ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           P+   I T G    A D+ S L ++RI+F+G PIN  VA  +I+QLL L + D + DI +
Sbjct: 4   PMPVVIETEGRYERAYDIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFL 63

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YIN PGGS  S L IYD M ++KP + T+  G AAS G +LLA G
Sbjct: 64  YINSPGGSVTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAG 108

[52][TOP]
>UniRef100_A9BDA0 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9211
           RepID=A9BDA0_PROM4
          Length = 200

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 50/107 (46%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
 Frame = +2

Query: 266 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 433
           P V P ++   G    A D+ S L R RIIF+G  +N QVA  +++Q+L L   D E DI
Sbjct: 7   PGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEAEDPEKDI 66

Query: 434 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            +YIN PGGS  + LAIYD M  + P V T+ +G+AAS G  LL+GG
Sbjct: 67  QLYINSPGGSVTAGLAIYDTMQQVTPDVVTICYGLAASMGAFLLSGG 113

[53][TOP]
>UniRef100_A6EMA1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=unidentified
           eubacterium SCB49 RepID=A6EMA1_9BACT
          Length = 226

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 58/123 (47%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
 Frame = +2

Query: 224 VSTTSYGAIEASGNPP-VSPAIMTP----GGALDLSSVLFRNRIIFIGQPINGQVAQRVI 388
           VS+T Y +I  S  P  ++P I+        A+D+ S L  +RIIF+G  IN QVA  V 
Sbjct: 17  VSSTYYDSILTSMYPVGLTPNIIEERQMNAVAMDVFSRLMMDRIIFLGTGINDQVANIVQ 76

Query: 389 SQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLA 568
           +QLL LA++D   DI +YIN PGGS Y+ L IYD M +I P V T+  G+AAS G +LL 
Sbjct: 77  AQLLFLASVDATRDIQIYINSPGGSVYAGLGIYDTMQFITPDVATICTGMAASMGAVLLC 136

Query: 569 GGE 577
            GE
Sbjct: 137 AGE 139

[54][TOP]
>UniRef100_B7GL34 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Anoxybacillus flavithermus WK1 RepID=CLPP_ANOFW
          Length = 196

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 48/91 (52%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G PI+  VA  ++SQLL LA  D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDISLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G  LLA G
Sbjct: 77  IYDTMQFIKPDVSTICIGMAASMGAFLLAAG 107

[55][TOP]
>UniRef100_B4UAX9 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Anaeromyxobacter sp. K RepID=CLPP_ANASK
          Length = 203

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 47/89 (52%), Positives = 62/89 (69%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G P++  VA  +I+QLL L + D + DI +YIN PGGS  S LAIY
Sbjct: 21  DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGSVTSGLAIY 80

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M ++KP+V T+  G AAS G  LLAGG
Sbjct: 81  DTMQYVKPQVSTICLGQAASMGAFLLAGG 109

[56][TOP]
>UniRef100_B8J5G7 ATP-dependent Clp protease proteolytic subunit n=2
           Tax=Anaeromyxobacter dehalogenans RepID=CLPP_ANAD2
          Length = 203

 Score = 94.4 bits (233), Expect = 6e-18
 Identities = 47/89 (52%), Positives = 62/89 (69%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G P++  VA  +I+QLL L + D + DI +YIN PGGS  S LAIY
Sbjct: 21  DIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPGGSVTSGLAIY 80

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M ++KP+V T+  G AAS G  LLAGG
Sbjct: 81  DTMQYVKPQVSTICLGQAASMGAFLLAGG 109

[57][TOP]
>UniRef100_A5GTU8 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. RCC307 RepID=A5GTU8_SYNR3
          Length = 196

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 46/91 (50%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+P+  + A R+++QLL L   D + DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFMGEPVTAESANRIVAQLLFLEAEDPDKDIFLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  +KP V TV  G+AAS G  LLA G
Sbjct: 75  IFDTMQHVKPDVQTVCVGLAASMGAFLLAAG 105

[58][TOP]
>UniRef100_A2C5C1 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. NATL1A
           RepID=A2C5C1_PROM1
          Length = 218

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 49/107 (45%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
 Frame = +2

Query: 266 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 433
           P V P ++   G    A D+ S L R RIIF+G  +N QVA  +++Q+L L   D E DI
Sbjct: 23  PGVLPTVIEQSGQGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDI 82

Query: 434 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            +Y+N PGGS  + LAIYD M  + P V T+ +G+AAS G  LL+GG
Sbjct: 83  QLYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGG 129

[59][TOP]
>UniRef100_C7M9G9 Endopeptidase Clp n=1 Tax=Capnocytophaga ochracea DSM 7271
           RepID=C7M9G9_CAPOD
          Length = 219

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 51/119 (42%), Positives = 68/119 (57%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 397
           H V++  Y  I  S  P +          +D+ S L  +RIIF+G  +N QVA  V +QL
Sbjct: 15  HGVNSLYYDKIIGSMTPYIMEERQLNVAQMDVFSRLMMDRIIFLGTDVNDQVANIVTAQL 74

Query: 398 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           L L ++D   DI +YIN PGGS Y+ L IYD M +IKP V T+  G+AAS   +LL  G
Sbjct: 75  LFLESVDSAKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGIAASMAAVLLCAG 133

[60][TOP]
>UniRef100_B5IJ76 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanobium
           sp. PCC 7001 RepID=B5IJ76_9CHRO
          Length = 196

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 46/91 (50%), Positives = 58/91 (63%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+G+P+  + A R+++QLL L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIVFLGEPVTAESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVQTVCVGLAASMGAFLLCAG 105

[61][TOP]
>UniRef100_P80244 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           subtilis RepID=CLPP_BACSU
          Length = 197

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 48/92 (52%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL LA  D E +I +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPKVSTICIGMAASMGAFLLAAGE 108

[62][TOP]
>UniRef100_Q2JIP1 ATP-dependent Clp protease proteolytic subunit 2 n=1
           Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=CLPP2_SYNJB
          Length = 200

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 45/91 (49%), Positives = 62/91 (68%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R+RIIF+G  ++  +A  +++Q+L L + D E DI +YIN PGGS Y+ +A
Sbjct: 15  AFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMA 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I+P V T+  G+AAS G  LLAGG
Sbjct: 75  IYDTMQHIQPDVSTICIGLAASMGAFLLAGG 105

[63][TOP]
>UniRef100_Q2JV68 ATP-dependent Clp protease proteolytic subunit 2 n=1
           Tax=Synechococcus sp. JA-3-3Ab RepID=CLPP2_SYNJA
          Length = 200

 Score = 94.0 bits (232), Expect = 8e-18
 Identities = 45/91 (49%), Positives = 62/91 (68%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R+RIIF+G  ++  +A  +++Q+L L + D E DI +YIN PGGS Y+ +A
Sbjct: 15  AFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMA 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I+P V T+  G+AAS G  LLAGG
Sbjct: 75  IYDTMQHIQPDVSTICIGLAASMGAFLLAGG 105

[64][TOP]
>UniRef100_Q0IE19 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. CC9311 RepID=Q0IE19_SYNS3
          Length = 229

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEASGNPPVS----PAIMTPGG----ALDLSSVLFRNRIIFIGQ 355
           ++ ++ H +     G +  S + P +    P ++   G    + D+ S L R RIIF+G 
Sbjct: 2   INARSHHPIENRWRGTLPVSAHTPHASPGVPTVVEQSGRGERSFDIYSRLLRERIIFLGT 61

Query: 356 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 535
            +N QVA  +++QLL L   D E DI +YIN PGGS  + LAIYD M  + P V T+ +G
Sbjct: 62  DVNDQVADALVAQLLFLEAEDPEKDIQVYINSPGGSITAGLAIYDTMQQVAPDVVTICYG 121

Query: 536 VAASQGTLLLAGG 574
           +AAS G  LL+GG
Sbjct: 122 LAASMGAFLLSGG 134

[65][TOP]
>UniRef100_C0Z6N4 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z6N4_BREBN
          Length = 198

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/91 (53%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G PIN  VA  V++QLL L   D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIHLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G  LLA G
Sbjct: 77  IYDTMHFIKPDVSTICIGMAASMGAFLLAAG 107

[66][TOP]
>UniRef100_B1XN46 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. PCC 7002 RepID=B1XN46_SYNP2
          Length = 197

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
 Frame = +2

Query: 272 VSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILM 439
           V P ++   G    A D+ S L R RI+F+G  I+  VA  V++QLL L   D + DI +
Sbjct: 5   VVPMVVEQSGMGERAFDIYSRLLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQL 64

Query: 440 YINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YIN PGGS Y+ +AIYD M  I+P V T+ +G+AAS G  LL+GG
Sbjct: 65  YINSPGGSVYAGMAIYDTMQQIRPNVVTICYGIAASMGAFLLSGG 109

[67][TOP]
>UniRef100_Q05T30 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. RS9916 RepID=Q05T30_9SYNE
          Length = 196

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/91 (50%), Positives = 58/91 (63%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+G+P+  + A R+++QLL L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVHTVCVGLAASMGAFLLCAG 105

[68][TOP]
>UniRef100_C8WXN6 ATP-dependent Clp protease, proteolytic subunit ClpP n=1
           Tax=Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446 RepID=C8WXN6_ALIAC
          Length = 198

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/90 (52%), Positives = 61/90 (67%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RI+ +G PI+ QVA  +++QLL LA  D E DI MYIN PGGS  + +AIY
Sbjct: 20  DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGMAIY 79

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M  I+P V T+  G+AAS G  LLA GE
Sbjct: 80  DTMQHIRPAVSTLCIGMAASMGAFLLAAGE 109

[69][TOP]
>UniRef100_B7DTZ4 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Alicyclobacillus acidocaldarius LAA1
           RepID=B7DTZ4_9BACL
          Length = 198

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/90 (52%), Positives = 61/90 (67%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RI+ +G PI+ QVA  +++QLL LA  D E DI MYIN PGGS  + +AIY
Sbjct: 20  DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMYINSPGGSVTAGMAIY 79

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M  I+P V T+  G+AAS G  LLA GE
Sbjct: 80  DTMQHIRPAVSTLCIGMAASMGAFLLAAGE 109

[70][TOP]
>UniRef100_B5WHP9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia
           sp. H160 RepID=B5WHP9_9BURK
          Length = 218

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
 Frame = +2

Query: 233 TSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 400
           +SY ++ A G   + P ++   G    A D+ S L R RI+F+  P+N Q A  +++QLL
Sbjct: 3   SSYPSVSALG---LVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLL 59

Query: 401 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
            L + + + DI  YIN PGGS Y  LAIYD M +IKP+V T+  G AAS GT LL  G+
Sbjct: 60  FLESENPDKDICFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQ 118

[71][TOP]
>UniRef100_A8W0U2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           selenitireducens MLS10 RepID=A8W0U2_9BACI
          Length = 197

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G PI+  VA  +++QLL LA  D + DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGTPIDDNVANSIVAQLLFLAADDPDKDISLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G+AAS G  LL  GE
Sbjct: 77  IYDTMQFIKPKVQTICIGMAASMGAFLLTAGE 108

[72][TOP]
>UniRef100_B8BRT2 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRT2_THAPS
          Length = 260

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/103 (47%), Positives = 64/103 (62%)
 Frame = +2

Query: 266 PPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYI 445
           PP  P +    G LD+ S L ++RI+ +G  +N +VA  +++QLL LA  D E DI +YI
Sbjct: 58  PPTLPTVEGGSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDITLYI 117

Query: 446 NCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           N PGGS  + LAIYD M +I   V TV FG+AAS G  LL  G
Sbjct: 118 NSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAG 160

[73][TOP]
>UniRef100_Q1AVS9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rubrobacter
           xylanophilus DSM 9941 RepID=CLPP_RUBXD
          Length = 200

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A+D+ S L ++RIIF+G P++ QVA  +++QLL L + D E DI +YIN PGGS  + LA
Sbjct: 23  AMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPGGSVSAGLA 82

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M ++KP + T   G+AAS G  LLA G
Sbjct: 83  IYDTMQFVKPDIVTTALGMAASMGAFLLAAG 113

[74][TOP]
>UniRef100_Q317Y6 ATP-dependent Clp protease proteolytic subunit 4 n=1
           Tax=Prochlorococcus marinus str. MIT 9312
           RepID=CLPP4_PROM9
          Length = 219

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G  IN QV+  +++QLL L   D E DI +YIN PGGS  + +A
Sbjct: 44  AFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 103

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I P V T+ FGVAAS G  LL+GG
Sbjct: 104 IYDTMQQISPDVVTICFGVAASMGAFLLSGG 134

[75][TOP]
>UniRef100_Q3M726 ATP-dependent Clp protease proteolytic subunit 3 n=1 Tax=Anabaena
           variabilis ATCC 29413 RepID=CLPP3_ANAVT
          Length = 214

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G PI+  VA  +++QLL L   D E DI +YIN PGGS Y+ +A
Sbjct: 25  AFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQLYINSPGGSVYAGMA 84

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD +  I+P V T+ FG+AAS G  LL  G
Sbjct: 85  IYDTIQQIRPDVVTICFGLAASMGAFLLTAG 115

[76][TOP]
>UniRef100_C1CY02 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Deinococcus
           deserti VCD115 RepID=C1CY02_DEIDV
          Length = 200

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 44/90 (48%), Positives = 62/90 (68%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G PI  Q+A  +++QLL L + + E +I MYINCPGG  Y+ LAIY
Sbjct: 19  DIYSRLLKDRIIFVGTPIESQMANTIVAQLLLLDSQNPEQEIQMYINCPGGEVYAGLAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M +IK  V T+  G+A S G++LL  G+
Sbjct: 79  DTMRYIKAPVSTICVGIAMSMGSVLLMAGD 108

[77][TOP]
>UniRef100_A8G7G1 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9215
           RepID=A8G7G1_PROM2
          Length = 214

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G  IN QV+  +++QLL L   D E DI +YIN PGGS  + +A
Sbjct: 39  AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 98

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I P V T+ FGVAAS G  LL+GG
Sbjct: 99  IYDTMQQISPDVVTICFGVAASMGAFLLSGG 129

[78][TOP]
>UniRef100_A2BTN7 ATP-dependent Clp protease proteolytic subunit n=2
           Tax=Prochlorococcus marinus RepID=A2BTN7_PROMS
          Length = 214

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G  IN QV+  +++QLL L   D E DI +YIN PGGS  + +A
Sbjct: 39  AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 98

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I P V T+ FGVAAS G  LL+GG
Sbjct: 99  IYDTMQQISPDVVTICFGVAASMGAFLLSGG 129

[79][TOP]
>UniRef100_A0LXW6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gramella
           forsetii KT0803 RepID=A0LXW6_GRAFK
          Length = 225

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 5/125 (4%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPP-VSPAIMTP----GGALDLSSVLFRNRIIFIGQPINGQVAQR 382
           H++++  Y  + +S  P  ++P I+        A+D+ S L  +RIIF+G  IN QVA  
Sbjct: 15  HNINSNYYDKVVSSMLPQGMTPNIIEERQMNAVAMDVFSRLMMDRIIFLGTGINEQVANI 74

Query: 383 VISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLL 562
           V +QLL L + D   DI +YIN PGGS Y+ L IYD M +IKP V T+  G+AAS G +L
Sbjct: 75  VQAQLLFLESTDASKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVL 134

Query: 563 LAGGE 577
           L  GE
Sbjct: 135 LCAGE 139

[80][TOP]
>UniRef100_B9NYZ9 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9202
           RepID=B9NYZ9_PROMA
          Length = 214

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G  IN QV+  +++QLL L   D E DI +YIN PGGS  + +A
Sbjct: 39  AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDIQIYINSPGGSVTAGMA 98

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I P V T+ FGVAAS G  LL+GG
Sbjct: 99  IYDTMQQISPDVVTICFGVAASMGAFLLSGG 129

[81][TOP]
>UniRef100_B4AGL6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           pumilus ATCC 7061 RepID=B4AGL6_BACPU
          Length = 198

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 48/92 (52%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L   D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPKVSTICIGMAASMGAFLLAAGE 108

[82][TOP]
>UniRef100_A8FHN9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           pumilus SAFR-032 RepID=CLPP_BACP2
          Length = 198

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 48/92 (52%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L   D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPKVSTICIGMAASMGAFLLAAGE 108

[83][TOP]
>UniRef100_A7Z939 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           amyloliquefaciens FZB42 RepID=CLPP_BACA2
          Length = 198

 Score = 93.2 bits (230), Expect = 1e-17
 Identities = 48/92 (52%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L   D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPKVSTICIGMAASMGAFLLAAGE 108

[84][TOP]
>UniRef100_C6D890 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Paenibacillus sp. JDR-2 RepID=C6D890_PAESJ
          Length = 195

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 48/89 (53%), Positives = 61/89 (68%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G  I+  VA  VI+QLL LA  D E DI +YIN PGGS  + +AIY
Sbjct: 19  DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLAADDPEKDIHLYINSPGGSVTAGMAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M +IKP V T+  G+AAS G+LLL  G
Sbjct: 79  DTMQYIKPDVSTICMGMAASMGSLLLTAG 107

[85][TOP]
>UniRef100_B5YE52 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dictyoglomus
           thermophilum H-6-12 RepID=B5YE52_DICT6
          Length = 194

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RI+F+G  IN +VA  V++QLL L + D E DI +YIN PGG 
Sbjct: 10  TPRGERAYDIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDIYLYINSPGGE 69

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
             + LAIYD M  IKPKV TV  G AAS   +LLA G+
Sbjct: 70  VSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGD 107

[86][TOP]
>UniRef100_A5GHT1 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. WH 7803 RepID=A5GHT1_SYNPW
          Length = 229

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 52/133 (39%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYG----AIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQ 355
           +D +T H +     G    ++     P V P ++   G    A D+ S L R RIIF+G 
Sbjct: 2   IDARTPHPIQNRWRGIQPMSVHPQAAPGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGT 61

Query: 356 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 535
            ++  VA  +++Q+L L   D E DI +YIN PGGS  + LAIYD M  + P V T+ +G
Sbjct: 62  GVDDAVADALVAQMLFLEAEDPEKDIQVYINSPGGSVTAGLAIYDTMQQVAPDVVTICYG 121

Query: 536 VAASQGTLLLAGG 574
           +AAS G  LL+GG
Sbjct: 122 LAASMGAFLLSGG 134

[87][TOP]
>UniRef100_Q0YUG9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium
           ferrooxidans DSM 13031 RepID=Q0YUG9_9CHLB
          Length = 225

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H   T   GAIE      + P ++   G    A D+ S L R RIIF+G  I+  VA  +
Sbjct: 10  HHARTLYSGAIEQGITNTLVPMVIETSGRGERAFDIFSRLLRERIIFLGNGIDEHVAGLI 69

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           ++QL+ L + D E DI +YIN PGGS  + L IYD M +I+P V TV  G+AAS G  LL
Sbjct: 70  MAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLL 129

Query: 566 AGG 574
           A G
Sbjct: 130 ASG 132

[88][TOP]
>UniRef100_C4D5D7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Spirosoma
           linguale DSM 74 RepID=C4D5D7_9SPHI
          Length = 229

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 44/90 (48%), Positives = 63/90 (70%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G P++  +A  +++QLL L + D + DILMY+N PGGS Y+ L I
Sbjct: 53  VDVFSRLMADRIIFMGLPVDDNIANIIVAQLLFLESADPKKDILMYLNSPGGSVYAGLGI 112

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M +++P V TV   +AAS G +LLAGG
Sbjct: 113 YDTMQYVRPDVATVCTSLAASMGAVLLAGG 142

[89][TOP]
>UniRef100_A4CYI5 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. WH 7805 RepID=A4CYI5_SYNPV
          Length = 229

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYG----AIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQ 355
           +D  T+H +     G    ++     P V P ++   G    A D+ S L R RIIF+G 
Sbjct: 2   IDALTSHPIQNRWRGTQPMSVHPQAAPGVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGT 61

Query: 356 PINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFG 535
            ++  VA  +++QLL L   D E DI +YIN PGGS  + LAIYD M  + P V T+ +G
Sbjct: 62  GVDDAVADALVAQLLFLEAEDPEKDIQVYINSPGGSVTAGLAIYDTMQQVAPDVVTICYG 121

Query: 536 VAASQGTLLLAGG 574
           +AAS G  LL+GG
Sbjct: 122 LAASMGAFLLSGG 134

[90][TOP]
>UniRef100_A3YWM4 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. WH 5701 RepID=A3YWM4_9SYNE
          Length = 213

 Score = 92.8 bits (229), Expect = 2e-17
 Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
 Frame = +2

Query: 263 NPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESD 430
           +P V P ++   G    A D+ S L R RIIF+G  I+ QVA  +++QLL L   D E D
Sbjct: 17  SPGVLPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDQVADSLVAQLLFLEAEDPEKD 76

Query: 431 ILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I +Y+N PGGS  + LAIYD M  + P V T+ +G+AAS G  LL+GG
Sbjct: 77  IQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGG 124

[91][TOP]
>UniRef100_B3QVW3 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Chloroherpeton thalassium ATCC 35110
           RepID=B3QVW3_CHLT3
          Length = 226

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
 Frame = +2

Query: 251 EASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATID 418
           E+S N  + P ++   G    A D+ S L R RIIF+G PI+   A  +++QL+ L + D
Sbjct: 22  ESSINNMLVPMVIETSGRGERAFDIFSRLLRERIIFLGTPIDDHSASLIMAQLIYLESED 81

Query: 419 EESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            E DI MYIN PGGS  + L +YD M +I+P V TV  G+AAS G  LLA G
Sbjct: 82  PERDIFMYINSPGGSVSAGLGLYDTMQYIRPDVSTVCVGMAASMGAFLLASG 133

[92][TOP]
>UniRef100_A2BZ42 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9515
           RepID=A2BZ42_PROM5
          Length = 204

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 49/91 (53%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G  IN QV   +++QLL L   D + DI +YIN PGGS  + LA
Sbjct: 27  AFDIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAEDPDKDIQIYINSPGGSVTAGLA 86

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I P V T+ FGVAAS G  LL+GG
Sbjct: 87  IYDTMQQISPDVVTICFGVAASMGAFLLSGG 117

[93][TOP]
>UniRef100_Q79CM2 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus elongatus PCC 7942 RepID=Q79CM2_SYNE7
          Length = 302

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
 Frame = +2

Query: 257 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
           +G+  + P ++   G    A D+ S L R RI+F+G  ++  VA  +++QLL L   D E
Sbjct: 94  AGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPE 153

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            DI +YIN PGGS  + +AIYD M  + P V T+ FG+AAS G  LL+GG
Sbjct: 154 KDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGG 203

[94][TOP]
>UniRef100_B6GCT8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella
           stercoris DSM 13279 RepID=B6GCT8_9ACTN
          Length = 206

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  + D+ S L  +RI+F+G+ +N   A  VI+QLL L + D E DI +YIN PGG 
Sbjct: 17  TPRGERSYDIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDISLYINSPGGE 76

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            YS LAI D M++IKP V T+  G+AAS   +LLAGG
Sbjct: 77  VYSGLAILDTMNYIKPDVSTICVGMAASMAAVLLAGG 113

[95][TOP]
>UniRef100_B1G293 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia
           graminis C4D1M RepID=B1G293_9BURK
          Length = 219

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 9/116 (7%)
 Frame = +2

Query: 257 SGNPPVS-----PAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 409
           S  PPV+     P ++   G    A D+ S L R RI+F+  P+N Q A  +++QLL L 
Sbjct: 3   SSYPPVTGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLFLE 62

Query: 410 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           + + + DI  YIN PGGS Y  LAIYD M +IKP+V T+  G AAS GT LL  G+
Sbjct: 63  SENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLCAGQ 118

[96][TOP]
>UniRef100_A4AMF1 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Flavobacteriales bacterium HTCC2170
           RepID=A4AMF1_9FLAO
          Length = 226

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 49/92 (53%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A+D+ S L  +RIIF+G  IN QVA  V +QLL L + D   DI +YIN PGGS Y+ L 
Sbjct: 48  AMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESADASKDIQIYINSPGGSVYAGLG 107

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V T+  G+AAS G +LL  GE
Sbjct: 108 IYDTMQFIKPDVATICTGMAASMGAVLLCAGE 139

[97][TOP]
>UniRef100_B9S1L6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus
           communis RepID=B9S1L6_RICCO
          Length = 294

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 60/161 (37%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
 Frame = +2

Query: 116 TISSSLPSPYGHSSKMGLSSKTS--DFRLKLDEKTTHDVSTTSYGAIEASGN------PP 271
           T  SS PSP   S K   ++K S   F  K    + H+ +  S+ +I++SG        P
Sbjct: 11  TPHSSSPSP-SSSLKPTTAAKPSLVSFNFKSPISSPHNKNFPSF-SIQSSGTLTPQFTAP 68

Query: 272 VSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINC 451
            +PA    G   D   +L R RI+F+G  I+  VA   ISQLL L   D   DI ++INC
Sbjct: 69  QTPATAMRGAESDAMGLLLRERIVFLGNNIDDFVADATISQLLLLDAQDPTKDIRLFINC 128

Query: 452 PGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           PGGS  + +AIYD +  ++  V TV  G++AS  +++L GG
Sbjct: 129 PGGSLSATMAIYDVVQLVRADVSTVALGISASTASIILGGG 169

[98][TOP]
>UniRef100_Q2LTK5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Syntrophus
           aciditrophicus SB RepID=CLPP_SYNAS
          Length = 194

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 48/92 (52%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G PI+ +VA  +I+QLL L + D + +I  Y+N PGG   S +A
Sbjct: 17  AYDIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPGGHISSGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V TV  G AAS G LLLA GE
Sbjct: 77  IYDTMRYIKPPVATVCVGQAASMGALLLAAGE 108

[99][TOP]
>UniRef100_O34125 ATP-dependent Clp protease proteolytic subunit 2 n=2
           Tax=Synechococcus elongatus RepID=CLPP2_SYNE7
          Length = 240

 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 47/110 (42%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
 Frame = +2

Query: 257 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
           +G+  + P ++   G    A D+ S L R RI+F+G  ++  VA  +++QLL L   D E
Sbjct: 32  AGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPE 91

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            DI +YIN PGGS  + +AIYD M  + P V T+ FG+AAS G  LL+GG
Sbjct: 92  KDIQLYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGG 141

[100][TOP]
>UniRef100_UPI0001851361 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           coahuilensis m4-4 RepID=UPI0001851361
          Length = 198

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  +++QLL L T + E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLETENPEKDISLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQYIKPKVQTICIGMAASMGAFLLAAGE 108

[101][TOP]
>UniRef100_A3PCF0 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9301
           RepID=A3PCF0_PROM0
          Length = 195

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L R RIIF+G+ +  + A R+++QLL L   D E DI MYIN PGGS Y  L I+
Sbjct: 17  DIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGSVYDGLGIF 76

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M  +KP + TV  G+AAS G  LLA G
Sbjct: 77  DTMQHVKPDIHTVCVGLAASMGAFLLAAG 105

[102][TOP]
>UniRef100_A2C9Y0 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9303
           RepID=A2C9Y0_PROM3
          Length = 197

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 45/91 (49%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+P+    A R+++Q+L L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  +KP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHVKPDVQTVCVGLAASMGAFLLCAG 105

[103][TOP]
>UniRef100_C7GZR3 Clp protease n=1 Tax=Eubacterium saphenum ATCC 49989
           RepID=C7GZR3_9FIRM
          Length = 196

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 48/92 (52%), Positives = 60/92 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           + D+ S L R+RIIFIG+PI   +A  +I+QLL L   D   DI +YIN PGG   S LA
Sbjct: 17  SFDIYSRLLRDRIIFIGEPIESNMASSIIAQLLFLEAEDSSKDICIYINSPGGDVTSGLA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V TV  G+AAS   +LL  GE
Sbjct: 77  IYDTMQFIKPQVQTVCVGMAASMAAVLLLAGE 108

[104][TOP]
>UniRef100_A8G4C0 ATP-dependent Clp protease proteolytic subunit n=2
           Tax=Prochlorococcus marinus RepID=A8G4C0_PROM2
          Length = 195

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L R RIIF+G+ +  + A R+++QLL L   D E DI MYIN PGGS Y  L I+
Sbjct: 17  DIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGSVYDGLGIF 76

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M  +KP + TV  G+AAS G  LLA G
Sbjct: 77  DTMQHVKPDIHTVCVGLAASMGAFLLAAG 105

[105][TOP]
>UniRef100_B5W1F7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Arthrospira
           maxima CS-328 RepID=B5W1F7_SPIMA
          Length = 237

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 4/126 (3%)
 Frame = +2

Query: 209 KTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVA 376
           + +H +S +    I +S    V P ++   G    A DL S L R+RIIF+G PI+ +VA
Sbjct: 15  RNSHIISGSQPVTINSSA-AGVIPMVVEQSGMGERAFDLYSRLLRDRIIFLGTPIDDEVA 73

Query: 377 QRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGT 556
             V +Q+L L + D E DI +YIN PGGS  + + IYD M  I+P V T+ +G+AAS G 
Sbjct: 74  NAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIYDTMQQIRPDVVTICYGLAASMGA 133

Query: 557 LLLAGG 574
            LLA G
Sbjct: 134 FLLASG 139

[106][TOP]
>UniRef100_B5JG63 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG63_9BACT
          Length = 182

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 46/90 (51%), Positives = 64/90 (71%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L ++RI+FIG PIN ++A  +I+QLL L   D + DI +YIN PGGS  S +AI
Sbjct: 1   MDIYSRLLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPGGSVTSGMAI 60

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M+++  +V T   G+AAS GT+LLAGG
Sbjct: 61  YDTMNFLSCEVSTWCIGMAASMGTILLAGG 90

[107][TOP]
>UniRef100_Q3B5V8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium
           luteolum DSM 273 RepID=CLPP_PELLD
          Length = 225

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H  S    GAIE      + P ++   G    A D+ S L R RIIF+G  I+  VA  +
Sbjct: 10  HHASKLYSGAIEQGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLI 69

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           ++QL+ L + D E DI +Y+N PGGS  + L IYD M +I+P V TV  G+AAS G  LL
Sbjct: 70  MAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLL 129

Query: 566 AGG 574
           A G
Sbjct: 130 ASG 132

[108][TOP]
>UniRef100_Q9RSZ7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Deinococcus
           radiodurans RepID=CLPP_DEIRA
          Length = 204

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 43/90 (47%), Positives = 62/90 (68%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G P+  Q+A  +++QLL L + + E +I MYINCPGG  Y+ LAIY
Sbjct: 22  DIYSRLLKDRIIFVGTPVESQMANSIVAQLLLLDSQNPEQEIQMYINCPGGEVYAGLAIY 81

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M +IK  V T+  G+A S G++LL  G+
Sbjct: 82  DTMRYIKAPVSTICVGMAMSMGSVLLMAGD 111

[109][TOP]
>UniRef100_Q1IWD9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Deinococcus
           geothermalis DSM 11300 RepID=CLPP_DEIGD
          Length = 200

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 43/90 (47%), Positives = 62/90 (68%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G PI  Q+A  +++QLL L + + + +I MYINCPGG  Y+ LAIY
Sbjct: 19  DIYSRLLKDRIIFVGTPIESQMANTIVAQLLLLDSQNPDQEIQMYINCPGGEVYAGLAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M +IK  V T+  G+A S G++LL  G+
Sbjct: 79  DTMRYIKAPVSTICVGIAMSMGSVLLMAGD 108

[110][TOP]
>UniRef100_Q7UZK7 ATP-dependent Clp protease proteolytic subunit 3 n=1
           Tax=Prochlorococcus marinus subsp. pastoris str.
           CCMP1986 RepID=CLPP3_PROMP
          Length = 215

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 49/91 (53%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G  IN QV+  +++QLL L   D   DI +YIN PGGS  + LA
Sbjct: 38  AFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQIYINSPGGSVTAGLA 97

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I P V T+ FGVAAS G  LL+GG
Sbjct: 98  IYDTMQQISPDVVTICFGVAASMGAFLLSGG 128

[111][TOP]
>UniRef100_Q7V7R2 ATP-dependent Clp protease proteolytic subunit 3 n=1
           Tax=Prochlorococcus marinus str. MIT 9313
           RepID=CLPP3_PROMM
          Length = 197

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 45/91 (49%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+P+    A R+++Q+L L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  +KP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHVKPDVQTVCVGLAASMGAFLLCAG 105

[112][TOP]
>UniRef100_Q7V992 ATP-dependent Clp protease proteolytic subunit 1 n=1
           Tax=Prochlorococcus marinus str. MIT 9313
           RepID=CLPP1_PROMM
          Length = 224

 Score = 92.0 bits (227), Expect = 3e-17
 Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 367
           +D    H +     G I    +P + P ++   G    A D+ S L R RIIF+G  ++ 
Sbjct: 2   IDSYCYHPIHNRWQG-IRPVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDD 60

Query: 368 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 547
           QVA  +++Q+L L   D E DI +YIN PGGS  + LAIYD M  + P V T+ +G+AAS
Sbjct: 61  QVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120

Query: 548 QGTLLLAGG 574
            G  LL GG
Sbjct: 121 MGAFLLCGG 129

[113][TOP]
>UniRef100_Q0IA98 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. CC9311 RepID=Q0IA98_SYNS3
          Length = 196

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 45/91 (49%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+P+    A R+++QLL L   D E +I +Y+N PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEPVTSDSANRIVAQLLFLEAEDPEKEIFLYVNSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVHTVCVGLAASMGAFLLCAG 105

[114][TOP]
>UniRef100_A9BAB3 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9211
           RepID=A9BAB3_PROM4
          Length = 196

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 45/91 (49%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+P+    A R+++QLL L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEPVTNDSANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D +  +KP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTIEHVKPDVHTVCVGLAASMGAFLLCAG 105

[115][TOP]
>UniRef100_A7GUT3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           cytotoxicus NVH 391-98 RepID=A7GUT3_BACCN
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L + D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPNVSTICIGMAASMGAFLLAAGE 108

[116][TOP]
>UniRef100_A2C5R6 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9303
           RepID=A2C5R6_PROM3
          Length = 224

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 49/113 (43%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
 Frame = +2

Query: 248 IEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATI 415
           I    +P + P ++   G    A D+ S L R RIIF+G  ++ QVA  +++Q+L L   
Sbjct: 17  IRPVSSPGILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAE 76

Query: 416 DEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D E DI +YIN PGGS  + LAIYD M  + P V T+ +G+AAS G  LL GG
Sbjct: 77  DPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGG 129

[117][TOP]
>UniRef100_C7XT97 ATP-dependent Clp protease, proteolytic subunit ClpP n=2
           Tax=Fusobacterium RepID=C7XT97_9FUSO
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G  I+  VA  +I+QLL L   D E DI+MYIN PGGS    +A
Sbjct: 16  AYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTDGMA 75

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M++IKP V TV  G AAS G  LLA G
Sbjct: 76  IYDTMNYIKPDVQTVCVGQAASMGAFLLAAG 106

[118][TOP]
>UniRef100_C3X055 ATP-dependent Clp protease proteolytic subunit n=2
           Tax=Fusobacterium RepID=C3X055_9FUSO
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G  I+  VA  +I+QLL L   D E DI+MYIN PGGS    +A
Sbjct: 16  AYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTDGMA 75

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M++IKP V TV  G AAS G  LLA G
Sbjct: 76  IYDTMNYIKPDVQTVCVGQAASMGAFLLAAG 106

[119][TOP]
>UniRef100_C2U534 ATP-dependent Clp protease proteolytic subunit n=4 Tax=Bacillus
           cereus group RepID=C2U534_BACCE
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L + D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPQVSTICIGMAASMGAFLLAAGE 108

[120][TOP]
>UniRef100_C2QJL4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus
           cereus R309803 RepID=C2QJL4_BACCE
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L + D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPQVSTICIGMAASMGAFLLAAGE 108

[121][TOP]
>UniRef100_A9VQ65 ATP-dependent Clp protease proteolytic subunit n=7 Tax=Bacillus
           RepID=A9VQ65_BACWK
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L + D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPQVSTICIGMAASMGAFLLAAGE 108

[122][TOP]
>UniRef100_B4WRF4 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WRF4_9SYNE
          Length = 269

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 44/91 (48%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+G P+   +A  +++QLL L   D E D+ +YIN PGGS  + +A
Sbjct: 82  AFDIYSRLLRERIVFLGTPVMDDIADSIVAQLLFLDAEDPEKDVQLYINSPGGSVTAGMA 141

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I+P V T+ FG+AAS G  LL+GG
Sbjct: 142 IYDTMQQIRPDVVTICFGLAASMGAFLLSGG 172

[123][TOP]
>UniRef100_A3Z6X6 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. RS9917 RepID=A3Z6X6_9SYNE
          Length = 196

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 45/91 (49%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+G+P+    A R+++QLL L   D + DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEAEDPDKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVHTVCVGLAASMGAFLLCAG 105

[124][TOP]
>UniRef100_A3TT10 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oceanicola
           batsensis HTCC2597 RepID=A3TT10_9RHOB
          Length = 210

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 47/91 (51%), Positives = 62/91 (68%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIF+  P++  ++  +++QLL L   +   DI MYIN PGG   S L+
Sbjct: 26  AYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHLEAENPTKDISMYINSPGGVVTSGLS 85

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKPKVGT+V G AAS G+LLLAGG
Sbjct: 86  IYDTMQYIKPKVGTLVIGQAASMGSLLLAGG 116

[125][TOP]
>UniRef100_Q8RHJ8 ATP-dependent Clp protease proteolytic subunit n=3
           Tax=Fusobacterium RepID=CLPP_FUSNN
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 49/91 (53%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G  I+  VA  +I+QLL L   D E DI+MYIN PGGS    +A
Sbjct: 16  AYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTDGMA 75

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M++IKP V TV  G AAS G  LLA G
Sbjct: 76  IYDTMNYIKPDVQTVCVGQAASMGAFLLAAG 106

[126][TOP]
>UniRef100_Q815J6 ATP-dependent Clp protease proteolytic subunit 2 n=47 Tax=Bacillus
           cereus group RepID=CLPP2_BACCR
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L + D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPQVSTICIGMAASMGAFLLAAGE 108

[127][TOP]
>UniRef100_Q81X63 ATP-dependent Clp protease proteolytic subunit 2 n=10 Tax=Bacillus
           anthracis RepID=CLPP2_BACAN
          Length = 193

 Score = 91.7 bits (226), Expect = 4e-17
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L + D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPQVSTICIGMAASMGAFLLAAGE 108

[128][TOP]
>UniRef100_B4U6S2 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U6S2_HYDS0
          Length = 205

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 50/97 (51%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RI+ +G PI+  VA  +++QLL L   D E DI MYIN PGGS
Sbjct: 22  TPRGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEAQDPEKDIQMYINSPGGS 81

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
             + LAIYD M +IKP V T+  G AAS G +LLA G
Sbjct: 82  VTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAG 118

[129][TOP]
>UniRef100_A5GL25 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. WH 7803 RepID=A5GL25_SYNPW
          Length = 196

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 46/91 (50%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+ +  + A R+++QLL L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVQTVCVGLAASMGAFLLCAG 105

[130][TOP]
>UniRef100_Q46L44 ATP-dependent Clp protease proteolytic subunit 1 n=2
           Tax=Prochlorococcus marinus RepID=CLPP1_PROMT
          Length = 196

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 43/91 (47%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+G+P+    A R+++QLL L   D + DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADDPDKDIFLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  +KP + TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHVKPDIHTVCVGLAASMGAFLLCAG 105

[131][TOP]
>UniRef100_A2BW88 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. MIT 9515
           RepID=A2BW88_PROM5
          Length = 196

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 45/89 (50%), Positives = 56/89 (62%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L R RIIF+G+ +    A R+++QLL L   D E DI MYIN PGGS Y  L I+
Sbjct: 17  DIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVYDGLGIF 76

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M  +KP + TV  G+AAS G  LLA G
Sbjct: 77  DTMQHVKPDIHTVCVGLAASMGAFLLAAG 105

[132][TOP]
>UniRef100_D0CM59 ATP-dependent Clp protease, proteolytic subunit ClpP n=1
           Tax=Synechococcus sp. WH 8109 RepID=D0CM59_9SYNE
          Length = 224

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 367
           +D ++ H +      A+  S   P+ P ++   G    A D+ S L R RIIF+G  ++ 
Sbjct: 2   IDARSHHPIQNRWRAAMPVSAPGPL-PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDD 60

Query: 368 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 547
            VA  +++Q+L L   D E DI +YIN PGGS  + LAIYD M  + P V T+ +G+AAS
Sbjct: 61  AVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120

Query: 548 QGTLLLAGG 574
            G  LL+GG
Sbjct: 121 MGAFLLSGG 129

[133][TOP]
>UniRef100_C7PQA3 Endopeptidase Clp n=1 Tax=Chitinophaga pinensis DSM 2588
           RepID=C7PQA3_CHIPD
          Length = 234

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 55/127 (43%), Positives = 72/127 (56%)
 Frame = +2

Query: 194 LKLDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQV 373
           L +D  T H ++  +   IE     P++ AIM      D+ S L  +RIIF+G P+N  V
Sbjct: 20  LVVDSYTRHQINALTPNIIEER---PMNMAIM------DVFSRLMMDRIIFMGDPVNDYV 70

Query: 374 AQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQG 553
           A  + +QLL L + D   DI MYIN PGGS Y+ L IYD M  I P V T+  G+AAS G
Sbjct: 71  ANIITAQLLFLESTDRTRDIQMYINSPGGSVYAGLGIYDTMQIIAPDVATICTGMAASFG 130

Query: 554 TLLLAGG 574
            +LL  G
Sbjct: 131 AVLLVAG 137

[134][TOP]
>UniRef100_C3WJ35 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Fusobacterium sp. 2_1_31 RepID=C3WJ35_9FUSO
          Length = 193

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 48/91 (52%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G  I+  VA  +I+QLL L + D E DI+MYIN PGGS    +A
Sbjct: 16  AYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGSVTDGMA 75

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M++IKP V TV  G AAS G  LL+ G
Sbjct: 76  IYDTMNYIKPDVQTVCVGQAASMGAFLLSSG 106

[135][TOP]
>UniRef100_B9YPN1 ATP-dependent Clp protease proteolytic subunit n=1 Tax='Nostoc
           azollae' 0708 RepID=B9YPN1_ANAAZ
          Length = 201

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 46/91 (50%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G PI+  VA  +++QLL L   D   DI +YIN PGGS Y+ +A
Sbjct: 12  AFDIYSRLLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSGKDIQLYINSPGGSVYAGMA 71

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD +  I+P V T+ FG+AAS G  LL  G
Sbjct: 72  IYDTIQQIRPDVVTICFGLAASMGAFLLTAG 102

[136][TOP]
>UniRef100_C8WW17 ATP-dependent Clp protease, proteolytic subunit ClpP n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WW17_ALIAC
          Length = 192

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 48/89 (53%), Positives = 60/89 (67%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G PI+  VA  V++QLL LA  D + DI MYIN PGGS  + LAIY
Sbjct: 19  DIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGSVSAGLAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M  IKP V T+  G+AAS   +LLA G
Sbjct: 79  DTMQHIKPDVSTMCVGMAASMAAVLLAAG 107

[137][TOP]
>UniRef100_A4CUN3 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. WH 7805 RepID=A4CUN3_SYNPV
          Length = 196

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 46/91 (50%), Positives = 57/91 (62%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+ +  + A R+++QLL L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVQTVCVGLAASMGAFLLCAG 105

[138][TOP]
>UniRef100_A4SDA4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium
           phaeovibrioides DSM 265 RepID=CLPP_PROVI
          Length = 225

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H  S    GAIE      + P ++   G    A D+ S L R RIIF+G  I+  VA  +
Sbjct: 10  HHASKLYSGAIEEGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLI 69

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           ++QL+ L + D + DI +Y+N PGGS  + L IYD M +I+P V TV  G+AAS G  LL
Sbjct: 70  MAQLIFLESEDPDRDIFIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLL 129

Query: 566 AGG 574
           A G
Sbjct: 130 ASG 132

[139][TOP]
>UniRef100_Q3ATL3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium
           chlorochromatii CaD3 RepID=CLPP_CHLCH
          Length = 225

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 52/123 (42%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H       GAIE   +  + P ++   G    A D+ S L R RIIF+G  I+  VA  +
Sbjct: 10  HHAKKLYSGAIEQGISNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTGIDEHVAGLI 69

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           ++QL+ L + D E DI +YIN PGGS  + L IYD M +I+P++ TV  G+AAS G  LL
Sbjct: 70  MAQLIFLESEDPERDIYIYINSPGGSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLL 129

Query: 566 AGG 574
           A G
Sbjct: 130 ASG 132

[140][TOP]
>UniRef100_Q46ID4 ATP-dependent Clp protease proteolytic subunit 3 n=1
           Tax=Prochlorococcus marinus str. NATL2A
           RepID=CLPP3_PROMT
          Length = 194

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 45/91 (49%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G  +N QVA  +++Q+L L   D E DI +Y+N PGGS  + LA
Sbjct: 15  AFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQLYVNSPGGSVTAGLA 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  + P V T+ +G+AAS G  LL+GG
Sbjct: 75  IYDTMQQVSPDVITICYGLAASMGAFLLSGG 105

[141][TOP]
>UniRef100_Q7V1W0 ATP-dependent Clp protease proteolytic subunit 1 n=1
           Tax=Prochlorococcus marinus subsp. pastoris str.
           CCMP1986 RepID=CLPP1_PROMP
          Length = 196

 Score = 91.3 bits (225), Expect = 5e-17
 Identities = 45/89 (50%), Positives = 56/89 (62%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L R RIIF+G+ +    A R+++QLL L   D E DI MYIN PGGS Y  L I+
Sbjct: 17  DIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVYDGLGIF 76

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M  +KP + TV  G+AAS G  LLA G
Sbjct: 77  DTMQHVKPDIHTVCVGLAASMGAFLLAAG 105

[142][TOP]
>UniRef100_C6CSW6 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Paenibacillus sp. JDR-2 RepID=C6CSW6_PAESJ
          Length = 195

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 46/91 (50%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G  +N  VA  +I+Q+L LA  D E DI +YIN PGGS  + +A
Sbjct: 19  AYDIYSRLLKDRIIFLGSGVNDVVANSIIAQMLFLAAEDPEKDISLYINSPGGSITAGMA 78

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G  LL  G
Sbjct: 79  IYDTMQYIKPDVSTICVGMAASMGAFLLTAG 109

[143][TOP]
>UniRef100_C4L5I2 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Exiguobacterium sp. AT1b RepID=C4L5I2_EXISA
          Length = 191

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 46/92 (50%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  +++QLL LA  D E DI +YIN PGGS  + +A
Sbjct: 16  AYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLAAEDPEKDISLYINSPGGSITAGMA 75

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M++IKP V T+  G+AAS G  LL  GE
Sbjct: 76  IYDTMNFIKPNVSTICIGMAASMGAFLLQAGE 107

[144][TOP]
>UniRef100_B8E290 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dictyoglomus
           turgidum DSM 6724 RepID=B8E290_DICTD
          Length = 194

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 49/98 (50%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RI+F+G  IN +VA  +++QLL L + D E DI +YIN PGG 
Sbjct: 10  TPRGERAYDIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDIYLYINSPGGE 69

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
             + LAIYD +  IKPKV TV  G AAS   +LLA G+
Sbjct: 70  VSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGD 107

[145][TOP]
>UniRef100_B4SEP7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pelodictyon
           phaeoclathratiforme BU-1 RepID=B4SEP7_PELPB
          Length = 225

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
 Frame = +2

Query: 242 GAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 409
           GAIE      + P ++   G    A D+ S L R RIIF+G  I+  VA  +++QL+ L 
Sbjct: 18  GAIEQGITNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLE 77

Query: 410 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           + D E DI +Y+N PGGS  + L IYD M +I+P+V TV  G+AAS G  LLA G
Sbjct: 78  SEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASG 132

[146][TOP]
>UniRef100_B3EFW5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium
           limicola DSM 245 RepID=B3EFW5_CHLL2
          Length = 225

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 52/115 (45%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
 Frame = +2

Query: 242 GAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 409
           GAIE      + P ++   G    A D+ S L R RIIF+G  I+  VA  V++QL+ L 
Sbjct: 18  GAIEEGIRNTLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLE 77

Query: 410 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           + D E DI +YIN PGGS  + L IYD M +I+P + TV  G+AAS G  LLA G
Sbjct: 78  SEDPERDIFIYINSPGGSVSAGLGIYDTMQYIRPDIATVCVGMAASMGAFLLASG 132

[147][TOP]
>UniRef100_B2T6L8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia
           phytofirmans PsJN RepID=B2T6L8_BURPP
          Length = 215

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 46/92 (50%), Positives = 60/92 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+  P+N Q A  +++QLL L + + + DI  YIN PGGS Y  LA
Sbjct: 27  AYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLFLESENPDKDICFYINSPGGSVYDGLA 86

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G AAS GT LL  G+
Sbjct: 87  IYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQ 118

[148][TOP]
>UniRef100_A2BQM8 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Prochlorococcus marinus str. AS9601
           RepID=A2BQM8_PROMS
          Length = 195

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 44/89 (49%), Positives = 57/89 (64%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L R RIIF+G+ +  + A R+++QLL L   D + DI MYIN PGGS Y  L I+
Sbjct: 17  DIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVYDGLGIF 76

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M  +KP + TV  G+AAS G  LLA G
Sbjct: 77  DTMQHVKPDIHTVCVGLAASMGAFLLAAG 105

[149][TOP]
>UniRef100_C2M3A3 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Capnocytophaga gingivalis ATCC 33624
           RepID=C2M3A3_CAPGI
          Length = 219

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 50/117 (42%), Positives = 68/117 (58%)
 Frame = +2

Query: 224 VSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLT 403
           VS+T Y  I +S  P +          +D+ S L  +RIIF+G  +N  VA  + +QLL 
Sbjct: 17  VSSTYYDKIISSMTPYIMEERQLNVTQMDVFSRLMMDRIIFLGTDVNSHVANIIQAQLLF 76

Query: 404 LATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           L ++D   DI +YIN PGG  YS L IYD M +IKP+V T+  G+AAS   +LL  G
Sbjct: 77  LESLDASKDIQIYINSPGGEVYSGLGIYDTMQFIKPEVATICTGMAASMAAVLLCAG 133

[150][TOP]
>UniRef100_A6GN68 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Limnobacter
           sp. MED105 RepID=A6GN68_9BURK
          Length = 215

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
 Frame = +2

Query: 242 GAIEASGNPPVSPAIMTPGG---ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLAT 412
           GA+E  GN  V   I   G    A D+ S L + R+IF+  PIN Q+A  +++Q+L L +
Sbjct: 9   GALETQGNMYVPMVIEQSGRGERAYDIYSRLLKERVIFLVGPINDQMANVIVAQMLFLES 68

Query: 413 IDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            + + DI +YIN PGGS  + +AIYD M +IKP V T+  G+AAS G  LL+ G
Sbjct: 69  ENPDKDIALYINSPGGSVSAGMAIYDTMQFIKPDVSTLCTGLAASMGAFLLSSG 122

[151][TOP]
>UniRef100_A1ZSL9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microscilla
           marina ATCC 23134 RepID=A1ZSL9_9SPHI
          Length = 232

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 46/90 (51%), Positives = 62/90 (68%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G  I+  VA  V +QLL L ++D + DIL+YIN PGGS Y+ L I
Sbjct: 55  IDVFSRLIMDRIIFLGMGIDDLVANVVTAQLLFLESVDSKKDILVYINSPGGSVYAGLGI 114

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M ++ P V T+  G+AAS G +LLAGG
Sbjct: 115 YDTMQYVNPDVVTICTGLAASMGAVLLAGG 144

[152][TOP]
>UniRef100_C5WMG5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum
           bicolor RepID=C5WMG5_SORBI
          Length = 283

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
 Frame = +2

Query: 86  QLAFSHRNSCTISSSL---PSPYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEA 256
           QL  S R +  +++++   P PYG + + G+ S   D            V  + Y  +E+
Sbjct: 31  QLLRSRRCARAVTAAVAGGPVPYGAAPRRGIWSIRDDLV----------VPRSPYFPVES 80

Query: 257 SGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDIL 436
           +      P+ M       + S LF++RII  G P+   +A  +++QLL L  ID   DI+
Sbjct: 81  AAGQERGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDII 140

Query: 437 MYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           MY+N PGGS  + +AI+D M  I+P V TV  G+AAS G  LL+ G
Sbjct: 141 MYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAG 186

[153][TOP]
>UniRef100_B8CY74 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Halothermothrix orenii H 168 RepID=CLPP_HALOH
          Length = 198

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 44/89 (49%), Positives = 61/89 (68%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RI+F+G PIN +++  +I+QLL L   D + DI +YIN PGGS  + LA+Y
Sbjct: 19  DIYSRLLKDRIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPGGSVTAALAMY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D + +IKP V T+  G AAS G LLLA G
Sbjct: 79  DTIQYIKPDVATICMGQAASAGALLLASG 107

[154][TOP]
>UniRef100_O67357 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Aquifex
           aeolicus RepID=CLPP_AQUAE
          Length = 201

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RI+ +G PI+  VA  +++QLL L + D + DI +YIN PGGS
Sbjct: 18  TPRGERAYDIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGS 77

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
             + LAIYD M +IKP V T+  G AAS G +LLA G
Sbjct: 78  VTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAG 114

[155][TOP]
>UniRef100_Q72XW9 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Bacillus
           cereus ATCC 10987 RepID=CLPP2_BACC1
          Length = 193

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 46/92 (50%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L + D + DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPDKDIHLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPQVSTICIGMAASMGAFLLAAGE 108

[156][TOP]
>UniRef100_Q31BD5 ATP-dependent Clp protease proteolytic subunit 1 n=1
           Tax=Prochlorococcus marinus str. MIT 9312
           RepID=CLPP1_PROM9
          Length = 195

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 44/89 (49%), Positives = 57/89 (64%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L R RIIF+G+ +  + A R+++QLL L   D + DI MYIN PGGS Y  L I+
Sbjct: 17  DIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVYDGLGIF 76

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M  +KP + TV  G+AAS G  LLA G
Sbjct: 77  DTMQHVKPDIHTVCVGLAASMGAFLLAAG 105

[157][TOP]
>UniRef100_Q13UT1 ATP-dependent Clp protease proteolytic subunit 1 n=1
           Tax=Burkholderia xenovorans LB400 RepID=CLPP1_BURXL
          Length = 215

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 52/119 (43%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
 Frame = +2

Query: 233 TSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLL 400
           +SY  I   G   + P ++   G    A D+ S L R RI+F+  P+N Q A  +++QLL
Sbjct: 3   SSYPTITGLG---LVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASVIVAQLL 59

Query: 401 TLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
            L + + + DI  YIN PGGS Y  LAIYD M +IKP+V T+  G AAS GT LL  G+
Sbjct: 60  FLESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQ 118

[158][TOP]
>UniRef100_Q65EI5 ATP-dependent Clp protease proteolytic subunit 1 n=1 Tax=Bacillus
           licheniformis ATCC 14580 RepID=CLPP1_BACLD
          Length = 198

 Score = 90.9 bits (224), Expect = 6e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L   D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP+V T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQFIKPQVSTICTGMAASMGAFLLAAGE 108

[159][TOP]
>UniRef100_B9L1E3 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1E3_THERP
          Length = 205

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 48/91 (52%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R+RIIF+G PI+ QVA  VI+Q+L LA  + E+DI +YIN PGG  Y+ LA
Sbjct: 24  AYDIYSRLLRDRIIFLGTPIDDQVANAVIAQMLFLAHENPEADIKLYINSPGGLVYAGLA 83

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  I+P V T   G+ AS   +LLA G
Sbjct: 84  IYDTMQMIEPDVATYCVGLGASMAAVLLAAG 114

[160][TOP]
>UniRef100_B3EMK8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium
           phaeobacteroides BS1 RepID=B3EMK8_CHLPB
          Length = 228

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRV 385
           H       GAIE      + P ++   G    A D+ S L R RIIF+G PI+  VA  +
Sbjct: 10  HQAKKMYSGAIEQGITNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTPIDDHVASLL 69

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           ++QLL L + D E D+ +YIN PGGS  + L +YD + +I+ +V TV  G+AAS G  LL
Sbjct: 70  MAQLLFLESEDPERDVFLYINSPGGSVSAGLGVYDTIQYIRSEVSTVCVGMAASMGAFLL 129

Query: 566 AGG 574
           A G
Sbjct: 130 ACG 132

[161][TOP]
>UniRef100_C9XRT5 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Clostridium
           difficile RepID=C9XRT5_CLODI
          Length = 194

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIFIG+ IN  +A  V++QLL L + D +SDI++YIN PGGS  S  AIY
Sbjct: 19  DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGSATSGFAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M++++  V T+  G+AAS    LLAGG
Sbjct: 79  DTMNYVRCDVSTICIGMAASMSAFLLAGG 107

[162][TOP]
>UniRef100_C6W3S7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6W3S7_DYAFD
          Length = 224

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 44/90 (48%), Positives = 62/90 (68%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G  ++  +A  +++QLL L + D + DILMYIN PGGS Y+ L I
Sbjct: 48  VDVFSRLMADRIIFMGTGVDDNIANIIVAQLLFLESADPKKDILMYINSPGGSVYAGLGI 107

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M +++P V TV   +AAS G +LLAGG
Sbjct: 108 YDTMQYVRPDVATVCTSLAASMGAVLLAGG 137

[163][TOP]
>UniRef100_C3WCG7 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Fusobacterium mortiferum ATCC 9817
           RepID=C3WCG7_FUSMR
          Length = 191

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 47/91 (51%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G  I+  VA  +++QLL L   D E DI+MYIN PGG   + +A
Sbjct: 16  AYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPEKDIIMYINSPGGVVTAGMA 75

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M++IKP V TV  G AAS G LLL+ G
Sbjct: 76  IYDTMNYIKPDVQTVCIGQAASMGALLLSAG 106

[164][TOP]
>UniRef100_C0BM18 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Flavobacteria bacterium MS024-3C RepID=C0BM18_9BACT
          Length = 226

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 48/92 (52%), Positives = 60/92 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A+D+ S L  +RIIF+G  IN QVA  V +QLL L + D   DI +YIN PGGS Y+ L 
Sbjct: 48  AMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESADAAKDIQIYINSPGGSVYAGLG 107

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V T+  G+AAS   +LL  GE
Sbjct: 108 IYDTMQFIKPDVATICTGIAASMAAVLLCAGE 139

[165][TOP]
>UniRef100_B5IJD8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cyanobium
           sp. PCC 7001 RepID=B5IJD8_9CHRO
          Length = 235

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
 Frame = +2

Query: 266 PPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDI 433
           P V P ++   G    A D+ S L R RIIF+G  I+  VA  +++QLL L   D E DI
Sbjct: 35  PGVLPTVVEQSGKGERAFDIYSRLLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDI 94

Query: 434 LMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            +YIN PGGS  + LAIYD M  + P V T+ +G+AAS G  LL+GG
Sbjct: 95  QIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGG 141

[166][TOP]
>UniRef100_A4CG33 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Robiginitalea biformata HTCC2501 RepID=A4CG33_9FLAO
          Length = 195

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 48/92 (52%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A+D+ S L  +RIIF+G  I+ QVA  V +QLL LA+ D   DI +YIN PGGS Y+ L 
Sbjct: 17  AMDVFSRLMMDRIIFLGTGISDQVANIVQAQLLFLASADSSKDIQIYINSPGGSVYAGLG 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V T+  G+AAS   +LL  GE
Sbjct: 77  IYDTMQFIKPDVATICTGMAASMAAVLLCAGE 108

[167][TOP]
>UniRef100_A3XHZ8 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Leeuwenhoekiella blandensis MED217
           RepID=A3XHZ8_9FLAO
          Length = 237

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 48/91 (52%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A+D+ S L  +RIIF+G  IN QVA  V +QLL L + D   DI +YIN PGGS Y+ L 
Sbjct: 61  AMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESADASKDIQIYINSPGGSVYAGLG 120

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G+AAS G +LL  G
Sbjct: 121 IYDTMQFIKPDVATICTGMAASMGAVLLCAG 151

[168][TOP]
>UniRef100_Q1MQ79 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lawsonia
           intracellularis PHE/MN1-00 RepID=CLPP_LAWIP
          Length = 209

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RI+ +G  +N QVA  + +QLL L + D E +I +YIN PGGS  + LA
Sbjct: 22  AYDIYSRLLKDRIVLLGTEVNDQVASLICAQLLFLESQDPEKEIYLYINSPGGSVTAGLA 81

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M++I P V TV  G AAS G LLLA GE
Sbjct: 82  IYDTMNYITPNVATVCMGRAASMGALLLAAGE 113

[169][TOP]
>UniRef100_Q2RZ59 ATP-dependent Clp protease proteolytic subunit 2 n=1
           Tax=Salinibacter ruber DSM 13855 RepID=CLPP2_SALRD
          Length = 233

 Score = 90.5 bits (223), Expect = 8e-17
 Identities = 46/92 (50%), Positives = 60/92 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RI+FIG PIN Q+A   ++QLL LA+   E  I +YIN PGG  YS L 
Sbjct: 35  AYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESSEKPINLYINSPGGVIYSGLG 94

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           +YD M +I   V T+  G+AAS G++LLA GE
Sbjct: 95  VYDTMQYIGAPVSTICVGLAASMGSVLLAAGE 126

[170][TOP]
>UniRef100_C4RPD5 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Micromonospora sp. ATCC 39149 RepID=C4RPD5_9ACTO
          Length = 213

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 45/84 (53%), Positives = 56/84 (66%)
 Frame = +2

Query: 323 LFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSW 502
           L + RIIF+G  +N QVA R+ +QLL LA  D + DI ++IN PGGS YS +AIYD M +
Sbjct: 33  LLKERIIFLGSEVNDQVANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYDTMQY 92

Query: 503 IKPKVGTVVFGVAASQGTLLLAGG 574
           I   V TV  G+AAS G LLL  G
Sbjct: 93  IDNDVSTVAMGMAASMGQLLLCAG 116

[171][TOP]
>UniRef100_C4F823 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella
           intestinalis DSM 13280 RepID=C4F823_9ACTN
          Length = 206

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  + D+ S L  +RI+F+G+ +N   A  VI+QLL L + D E DI +YIN PGG 
Sbjct: 17  TPRGERSYDIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDISLYINSPGGE 76

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            YS LAI D M++IKP V T+  G+AAS   +LLA G
Sbjct: 77  VYSGLAILDTMNYIKPDVSTICVGMAASMAAVLLAAG 113

[172][TOP]
>UniRef100_C1QE40 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brachyspira
           murdochii DSM 12563 RepID=C1QE40_9SPIR
          Length = 193

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G  IN  VA  VI+QLL L + D E DI +YIN PGG   + L +Y
Sbjct: 18  DIYSRLLKDRIIFLGGEINDDVANIVIAQLLFLESADPEKDISLYINSPGGVVTAALGMY 77

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M ++KP V T+  G AAS G LLLAGG
Sbjct: 78  DTMQYVKPDVATLCVGQAASAGALLLAGG 106

[173][TOP]
>UniRef100_A9DJX6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Kordia
           algicida OT-1 RepID=A9DJX6_9FLAO
          Length = 230

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPV--SPAIMTPG---------GALDLSSVLFRNRIIFIGQPIN 364
           H ++   Y  I +  +P    +P  MTP            +D+ S L  +RIIF+G  I+
Sbjct: 15  HGINNMYYDKIVSRMSPSAFSNPVGMTPYIIEERQMNVAQMDVFSRLMMDRIIFLGTGID 74

Query: 365 GQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAA 544
            QVA  V +QLL + ++D   DI +YIN PGGS Y+ L IYD M +IKP V T+  G+AA
Sbjct: 75  DQVANIVQAQLLFMESVDSSKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAA 134

Query: 545 SQGTLLLAGGE 577
           S G +LL  G+
Sbjct: 135 SMGAVLLCAGQ 145

[174][TOP]
>UniRef100_A2TRW6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dokdonia
           donghaensis MED134 RepID=A2TRW6_9FLAO
          Length = 224

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/90 (53%), Positives = 59/90 (65%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L  +RIIF+G  IN QVA  V +QLL L + D   DI +YIN PGGS Y+ L IY
Sbjct: 50  DVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESTDANKDIQIYINSPGGSVYAGLGIY 109

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M +IKP V T+  G+AAS G +LL  GE
Sbjct: 110 DTMQFIKPDVATICTGMAASMGAVLLCAGE 139

[175][TOP]
>UniRef100_Q2GFT8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia
           chaffeensis str. Arkansas RepID=CLPP_EHRCR
          Length = 199

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 47/92 (51%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIFI  PI  Q+A  +++QL+ L + + E +I MYIN PGG   + L+
Sbjct: 17  AYDIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEICMYINSPGGVVTAGLS 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G AAS G+LLLA GE
Sbjct: 77  IYDTMQYIKPKVSTLCLGQAASMGSLLLAAGE 108

[176][TOP]
>UniRef100_A4J7L9 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Desulfotomaculum reducens MI-1 RepID=CLPP_DESRM
          Length = 195

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 48/91 (52%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIFIG PI+  +A  VI+Q L L   D E DI +YIN PGG   + LA
Sbjct: 18  AYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLA 77

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G AAS G+ LLA G
Sbjct: 78  IYDTMQYIKPAVSTICLGQAASMGSFLLAAG 108

[177][TOP]
>UniRef100_A1BI15 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chlorobium
           phaeobacteroides DSM 266 RepID=CLPP_CHLPD
          Length = 227

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 51/115 (44%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
 Frame = +2

Query: 242 GAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLA 409
           GAIE      + P ++   G    A D+ S L R RIIF+G  I+  VA  +++QL+ L 
Sbjct: 18  GAIEQGITGSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLE 77

Query: 410 TIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           + D E DI +Y+N PGGS  + L IYD M +I+P V TV  G+AAS G  LLA G
Sbjct: 78  SEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASG 132

[178][TOP]
>UniRef100_C0QW91 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brachyspira
           hyodysenteriae WA1 RepID=CLPP_BRAHW
          Length = 198

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 47/89 (52%), Positives = 59/89 (66%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G  IN  VA  VI+QLL L + D E DI +YIN PGG   + L +Y
Sbjct: 23  DIYSRLLKDRIIFLGGEINDDVANVVIAQLLFLESADPEKDISLYINSPGGVVTAALGMY 82

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M ++KP V T+  G AAS G LLLAGG
Sbjct: 83  DTMQYVKPDVATLCVGQAASAGALLLAGG 111

[179][TOP]
>UniRef100_A5GQ10 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. RCC307 RepID=A5GQ10_SYNR3
          Length = 207

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
 Frame = +2

Query: 224 VSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVIS 391
           +   S+  I +S    + P ++   G    A D+ S L R RIIF+G  I+  +A  V++
Sbjct: 2   IEAISHHPIHSSWQNTLVPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDAIADAVVA 61

Query: 392 QLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAG 571
           QLL L   D E +I +Y+N PGGS  + LAIYD M  + P V T+ +G+AAS G  LL+G
Sbjct: 62  QLLYLEAEDPEKEIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSG 121

Query: 572 G 574
           G
Sbjct: 122 G 122

[180][TOP]
>UniRef100_C9KKA6 ATP-dependent Clp protease, proteolytic subunit ClpP n=1
           Tax=Mitsuokella multacida DSM 20544 RepID=C9KKA6_9FIRM
          Length = 199

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G PI+  VA  V++QLL L + D + DI +YIN PGG   + LA
Sbjct: 12  AYDIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYINSPGGVVTAGLA 71

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G AAS G LLL  G
Sbjct: 72  IYDTMQYIKPDVSTICIGQAASMGALLLTAG 102

[181][TOP]
>UniRef100_C6JII4 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Fusobacterium varium ATCC 27725 RepID=C6JII4_FUSVA
          Length = 191

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 49/104 (47%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
 Frame = +2

Query: 275 SPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMY 442
           SP ++   G    A D+ S L ++RIIF+G  I+  VA  +++QLL L   D + DI+MY
Sbjct: 3   SPTVVESTGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMY 62

Query: 443 INCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IN PGG   + +AIYD M++IKP V TV  G AAS G LLL  G
Sbjct: 63  INSPGGVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLGAG 106

[182][TOP]
>UniRef100_A3J499 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Flavobacteria bacterium BAL38 RepID=A3J499_9FLAO
          Length = 228

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 48/119 (40%), Positives = 69/119 (57%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 397
           H V++  Y  I  S  P +         ++D+ S L  +RIIF+G  ++  VA  + +QL
Sbjct: 25  HGVNSLYYDKIVGSMTPYIIEERQLNVASMDVFSRLMMDRIIFMGTGVDDYVANIIQAQL 84

Query: 398 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           L L ++D   DI +YIN PGGS Y+ L IYD M ++KP V T+  G+AAS G +LL  G
Sbjct: 85  LFLESVDASKDISIYINSPGGSVYAGLGIYDTMQFVKPDVATICTGMAASMGAVLLCAG 143

[183][TOP]
>UniRef100_Q3YSQ3 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia
           canis str. Jake RepID=CLPP_EHRCJ
          Length = 200

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 48/92 (52%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIFI  PI  Q+A  V++QL+ L   + E +I MYIN PGG   + L+
Sbjct: 17  AYDIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEICMYINSPGGVVTAGLS 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+  G AAS G+LLLA GE
Sbjct: 77  IYDTMQYIKPKVSTLCLGQAASMGSLLLAAGE 108

[184][TOP]
>UniRef100_B8FA62 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=CLPP_DESAA
          Length = 201

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 46/89 (51%), Positives = 61/89 (68%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G  +N  VA  +I+QLL L + D E DI  YIN PGGS  + +AIY
Sbjct: 19  DIYSRLLKDRIIFLGTEVNDVVANSIIAQLLFLESDDPEKDINFYINSPGGSVTAGMAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M++IKP++ TV  G AAS G +LLA G
Sbjct: 79  DTMAYIKPEITTVCIGQAASMGAVLLAAG 107

[185][TOP]
>UniRef100_UPI00017F51FB ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium
           difficile QCD-23m63 RepID=UPI00017F51FB
          Length = 194

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 44/89 (49%), Positives = 62/89 (69%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIFIG+ IN  +A  V++QLL L + D +SDI++YIN PGGS  +  AIY
Sbjct: 19  DIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDIIIYINSPGGSVTAGFAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M++++  V T+  G+AAS    LLAGG
Sbjct: 79  DTMNYVRCDVSTICIGMAASMSAFLLAGG 107

[186][TOP]
>UniRef100_C5CI95 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Kosmotoga
           olearia TBF 19.5.1 RepID=C5CI95_KOSOT
          Length = 206

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
 Frame = +2

Query: 269 PVSPAIMTPGGA----LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDIL 436
           PV P ++   G      D+ + L   RIIF+G P++ +++  V++QLL L + D + DI 
Sbjct: 7   PVVPYVVENKGRGERIYDIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQDPDKDIS 66

Query: 437 MYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           +YIN PGGS  S LAIYD M +IKP V T+  G+AAS   ++LAGG
Sbjct: 67  IYINSPGGSVTSGLAIYDTMQYIKPDVSTICIGMAASMAAVILAGG 112

[187][TOP]
>UniRef100_C0QQZ7 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Persephonella marina EX-H1 RepID=C0QQZ7_PERMH
          Length = 202

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 50/97 (51%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RII +G PI+  +A  +I+QLL L + D E DI MYIN PGG 
Sbjct: 20  TPRGERAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDIYMYINSPGGV 79

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
             S LAIYD M +IKP V T+  G AAS G  LL+ G
Sbjct: 80  VTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAG 116

[188][TOP]
>UniRef100_B2JDW0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Burkholderia
           phymatum STM815 RepID=B2JDW0_BURP8
          Length = 217

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 46/91 (50%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RI+F+  P+N Q A  +++QLL L + + + DI  YIN PGGS Y  LA
Sbjct: 29  AYDIYSRLLRERIVFLVGPVNDQSASLIVAQLLFLESENPDKDISFYINSPGGSVYDGLA 88

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M +IKP V T+  G AAS GT LLA G
Sbjct: 89  IFDTMQFIKPDVSTLCTGFAASMGTFLLAAG 119

[189][TOP]
>UniRef100_Q2B709 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bacillus sp.
           NRRL B-14911 RepID=Q2B709_9BACI
          Length = 201

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/92 (48%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  V+  +++QLL L   + E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDITLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +I+PKV TV  G+AAS G  LLA GE
Sbjct: 77  IYDTMQYIRPKVSTVCIGMAASMGAFLLAAGE 108

[190][TOP]
>UniRef100_Q067G7 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. BL107 RepID=Q067G7_9SYNE
          Length = 197

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/91 (49%), Positives = 56/91 (61%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+ +    A R+++Q+L L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVQTVCVGLAASMGAFLLCAG 105

[191][TOP]
>UniRef100_D0CJA0 ATP-dependent Clp protease, proteolytic subunit ClpP n=1
           Tax=Synechococcus sp. WH 8109 RepID=D0CJA0_9SYNE
          Length = 205

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/91 (49%), Positives = 56/91 (61%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+ +    A R+++Q+L L   D E DI +YIN PGGS Y  L 
Sbjct: 23  AFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLG 82

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 83  IFDTMQHIKPDVHTVCVGLAASMGAFLLCAG 113

[192][TOP]
>UniRef100_C4DMI5 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Stackebrandtia nassauensis DSM 44728
           RepID=C4DMI5_9ACTO
          Length = 207

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/84 (53%), Positives = 55/84 (65%)
 Frame = +2

Query: 323 LFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSW 502
           L + RI+F+G  +N QVA RV +QLL LA  D E DI +YIN PGGS Y  +AIYD M +
Sbjct: 27  LLKERIVFMGTEVNSQVANRVSAQLLLLAADDPERDINLYINSPGGSVYDGMAIYDTMQF 86

Query: 503 IKPKVGTVVFGVAASQGTLLLAGG 574
           I   V T+  G+AAS G LLL  G
Sbjct: 87  ISNDVATIAMGMAASMGQLLLCAG 110

[193][TOP]
>UniRef100_A3HZM6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Algoriphagus
           sp. PR1 RepID=A3HZM6_9SPHI
          Length = 223

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 42/90 (46%), Positives = 62/90 (68%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G  I+  +A  +++QLL L ++D + D+L+Y+N PGGS  + L I
Sbjct: 47  IDVFSRLIMDRIIFLGTGIDDHIANIIVAQLLFLESVDAKKDVLLYVNSPGGSVTAGLGI 106

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M +I P V T+  G+AAS G +LLAGG
Sbjct: 107 YDTMQYIGPDVATICTGIAASMGAVLLAGG 136

[194][TOP]
>UniRef100_A6SY74 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Janthinobacterium sp. Marseille RepID=CLPP_JANMA
          Length = 210

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/92 (48%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIF+  P+N Q+A  +++QLL L + + + DI +YIN PGGS  + +A
Sbjct: 33  AYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGMA 92

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V T+  G+AAS G  LLA GE
Sbjct: 93  IYDTMQFIKPNVSTLCTGLAASMGAFLLAAGE 124

[195][TOP]
>UniRef100_Q5HBX5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia
           ruminantium str. Welgevonden RepID=CLPP_EHRRW
          Length = 198

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 46/92 (50%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIFI  PI  Q+A  V++QL+ L   + E DI MYIN PGG   + L+
Sbjct: 17  AYDIYSRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDISMYINSPGGVVTAGLS 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M ++KP++ T+  G AAS G+LLLA GE
Sbjct: 77  IYDTMQYVKPRIATLCLGQAASMGSLLLAAGE 108

[196][TOP]
>UniRef100_Q3AJN8 ATP-dependent Clp protease proteolytic subunit 2 n=1
           Tax=Synechococcus sp. CC9605 RepID=CLPP2_SYNSC
          Length = 197

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/91 (49%), Positives = 56/91 (61%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+ +    A R+++Q+L L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVHTVCVGLAASMGAFLLCAG 105

[197][TOP]
>UniRef100_Q7U6N7 ATP-dependent Clp protease proteolytic subunit 2 n=1
           Tax=Synechococcus sp. WH 8102 RepID=CLPP2_SYNPX
          Length = 197

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/91 (49%), Positives = 56/91 (61%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+ +    A R+++Q+L L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVHTVCVGLAASMGAFLLCAG 105

[198][TOP]
>UniRef100_Q3AY04 ATP-dependent Clp protease proteolytic subunit 1 n=1
           Tax=Synechococcus sp. CC9902 RepID=CLPP1_SYNS9
          Length = 197

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 45/91 (49%), Positives = 56/91 (61%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R RIIF+G+ +    A R+++Q+L L   D E DI +YIN PGGS Y  L 
Sbjct: 15  AFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPGGSVYDGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I+D M  IKP V TV  G+AAS G  LL  G
Sbjct: 75  IFDTMQHIKPDVQTVCVGLAASMGAFLLCAG 105

[199][TOP]
>UniRef100_Q11UE1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Cytophaga
           hutchinsonii ATCC 33406 RepID=Q11UE1_CYTH3
          Length = 229

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 46/90 (51%), Positives = 60/90 (66%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G  I+  VA  V +QLL L ++D + DI+MYIN PGGS Y+ L I
Sbjct: 55  IDVFSRLMGDRIIFLGTGIDDYVANVVNAQLLFLESVDPKKDIMMYINSPGGSVYAGLGI 114

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M +I P V T   G+AAS G +LL GG
Sbjct: 115 YDTMHYINPDVSTTCVGLAASMGAVLLCGG 144

[200][TOP]
>UniRef100_C6J201 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Paenibacillus sp. oral taxon 786 str. D14
           RepID=C6J201_9BACL
          Length = 196

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 46/89 (51%), Positives = 60/89 (67%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+   I+ +VA  VI+QLL LA  D E DI +YIN PGGS  + + IY
Sbjct: 19  DIYSRLLKDRIIFLSNAIDDEVANLVIAQLLFLAAEDPEKDIHLYINSPGGSVTAGMGIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M +IKP V T+  G+AAS G+LLL  G
Sbjct: 79  DTMQYIKPDVSTICVGMAASMGSLLLTAG 107

[201][TOP]
>UniRef100_A4E700 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Collinsella
           aerofaciens ATCC 25986 RepID=A4E700_9ACTN
          Length = 210

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  + D+ S L  +RIIF+G+ IN   A  V++QLL L + D E DI +YIN PGG 
Sbjct: 21  TPRGERSYDIYSRLLNDRIIFLGEEINSVSANLVVAQLLHLESQDAEKDISLYINSPGGE 80

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            YS LAI D M++IKP+V T+  G+AAS   +LL+ G
Sbjct: 81  VYSGLAILDTMNFIKPQVSTICVGMAASMAAVLLSAG 117

[202][TOP]
>UniRef100_A3U6U6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Croceibacter
           atlanticus HTCC2559 RepID=A3U6U6_9FLAO
          Length = 224

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 54/128 (42%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPG---------GALDLSSVLFRNRIIFIGQPINGQ 370
           H +++  Y  I +S    + P  +TP             D+ S L  +RIIF+G  IN Q
Sbjct: 15  HGINSNYYNDIVSS----MIPVGLTPNIIEERQMNIAIFDVFSRLMMDRIIFLGTGINDQ 70

Query: 371 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQ 550
           VA  V +QLL L + D   DI +YIN PGGS Y+ L IYD M +IKP V T+  G+AAS 
Sbjct: 71  VANIVQAQLLFLESTDANKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASM 130

Query: 551 GTLLLAGG 574
           G +LL  G
Sbjct: 131 GAVLLCAG 138

[203][TOP]
>UniRef100_B6TS08 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
           RepID=B6TS08_MAIZE
          Length = 281

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 3/166 (1%)
 Frame = +2

Query: 86  QLAFSHRNSCTISSSLPS---PYGHSSKMGLSSKTSDFRLKLDEKTTHDVSTTSYGAIEA 256
           QL  S R +  +++++     PYG + + G+ S   D            V  + Y  +E+
Sbjct: 29  QLLRSRRCARAVTTAVAGGAVPYGANPRRGIWSIRDDLV----------VPRSPYFPVES 78

Query: 257 SGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDIL 436
           +      P+ M       + S LF++RII  G P+   +A  +++QLL L  ID   DI+
Sbjct: 79  AAGQERGPSPMVMERFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDII 138

Query: 437 MYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           MY+N PGGS  + +AI+D M  I+P V TV  G+AAS G  LL+ G
Sbjct: 139 MYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAG 184

[204][TOP]
>UniRef100_B1HVR0 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Bacillales
           RepID=CLPP_LYSSC
          Length = 197

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 46/92 (50%), Positives = 60/92 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  +++QLL L   D + DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M  IKPKV T+  G+AAS G  LLA GE
Sbjct: 77  IYDTMQIIKPKVQTICIGMAASMGAFLLAAGE 108

[205][TOP]
>UniRef100_Q74C82 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Geobacter
           sulfurreducens RepID=CLPP_GEOSL
          Length = 199

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 46/90 (51%), Positives = 60/90 (66%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G P++  VA  VI+Q+L L   D + DI +YIN PGG   S +AIY
Sbjct: 18  DIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIHLYINSPGGVVTSGMAIY 77

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M +IK  V T+  G AAS G LLL+GGE
Sbjct: 78  DTMQYIKAPVSTICVGQAASMGALLLSGGE 107

[206][TOP]
>UniRef100_Q39UH2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Geobacter
           metallireducens GS-15 RepID=CLPP_GEOMG
          Length = 199

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 47/90 (52%), Positives = 60/90 (66%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G PI+  VA  VI+QLL L   D + DI +YIN PGG   + +AIY
Sbjct: 18  DIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHLYINSPGGVVTAGMAIY 77

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M +IK  V T+  G AAS G LLL+GGE
Sbjct: 78  DTMQYIKAPVSTICVGQAASMGALLLSGGE 107

[207][TOP]
>UniRef100_A5FRE5 ATP-dependent Clp protease proteolytic subunit n=2
           Tax=Dehalococcoides RepID=CLPP_DEHSB
          Length = 200

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S+L + RIIF+G  IN QVA  VI+QLL L   D + DI +YI+ PGG   + LA
Sbjct: 21  AFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLA 80

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           +YD M  I+PKV T+  GVAAS  T+LL  G
Sbjct: 81  MYDTMQLIRPKVSTICVGVAASMATVLLCAG 111

[208][TOP]
>UniRef100_Q3Z8J8 ATP-dependent Clp protease proteolytic subunit n=2
           Tax=Dehalococcoides RepID=CLPP_DEHE1
          Length = 200

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S+L + RIIF+G  IN QVA  VI+QLL L   D + DI +YI+ PGG   + LA
Sbjct: 21  AFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLA 80

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           +YD M  I+PKV T+  GVAAS  T+LL  G
Sbjct: 81  MYDTMQLIRPKVSTICVGVAASMATVLLCAG 111

[209][TOP]
>UniRef100_P58276 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium
           acetobutylicum RepID=CLPP_CLOAB
          Length = 193

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 42/89 (47%), Positives = 60/89 (67%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++R+IF+G+ +N   A  V++QLL L + D + DI +YIN PGGS  S +AIY
Sbjct: 19  DIYSRLLKDRVIFLGEEVNDTTASLVVAQLLFLESEDPDKDIYLYINSPGGSITSGMAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M ++KP V T+  G+AAS G+ LL  G
Sbjct: 79  DTMQYVKPDVSTICIGMAASMGSFLLTAG 107

[210][TOP]
>UniRef100_Q65E10 ATP-dependent Clp protease proteolytic subunit 2 n=1 Tax=Bacillus
           licheniformis ATCC 14580 RepID=CLPP2_BACLD
          Length = 190

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 46/89 (51%), Positives = 59/89 (66%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RII IG   N  +A RV +QLL L+  D E DI +YIN PGGST +  AI 
Sbjct: 19  DIFSRLLKDRIIMIGSEFNDDLANRVTAQLLFLSAEDNEKDISIYINSPGGSTSAGYAIL 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M ++KP V T+  G+AAS G +LLAGG
Sbjct: 79  DTMDYVKPDVRTICVGMAASMGAILLAGG 107

[211][TOP]
>UniRef100_Q7UA36 ATP-dependent Clp protease proteolytic subunit 1 n=1
           Tax=Synechococcus sp. WH 8102 RepID=CLPP1_SYNPX
          Length = 224

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 367
           +D ++ H +       +  S   P+ P ++   G    A D+ S L R RIIF+G  ++ 
Sbjct: 2   IDARSHHPIQNRWRAEMPISAPGPL-PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDD 60

Query: 368 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 547
            VA  +++Q+L L   D E DI +YIN PGGS  + LAIYD M  + P V T+ +G+AAS
Sbjct: 61  AVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120

Query: 548 QGTLLLAGG 574
            G  LL+GG
Sbjct: 121 MGAFLLSGG 129

[212][TOP]
>UniRef100_B2V7P4 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V7P4_SULSY
          Length = 201

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RII +G PI+  +A  V++QLL L + D + DI MYIN PGG 
Sbjct: 16  TPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGV 75

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
             + LAIYD M++IKP V T+  G AAS G  LL+ G
Sbjct: 76  VTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAG 112

[213][TOP]
>UniRef100_Q062N1 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Synechococcus sp. BL107 RepID=Q062N1_9SYNE
          Length = 224

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
 Frame = +2

Query: 200 LDEKTTHDVSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPING 367
           +D ++ H +       +  S   P+ P ++   G    A D+ S L R RIIF+G  ++ 
Sbjct: 2   IDARSHHPIQNRWRSEMPISAPGPL-PTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDD 60

Query: 368 QVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAAS 547
            VA  +++Q+L L   D E DI +Y+N PGGS  + LAIYD M  + P V T+ +G+AAS
Sbjct: 61  AVADALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAAS 120

Query: 548 QGTLLLAGG 574
            G  LL+GG
Sbjct: 121 MGAFLLSGG 129

[214][TOP]
>UniRef100_C9LUB1 ATP-dependent Clp protease, proteolytic subunit ClpP n=1
           Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUB1_9FIRM
          Length = 206

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 45/91 (49%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RI+F+G PI+  VA  V++QLL L + D + DI +YIN PGG   + LA
Sbjct: 22  AYDIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGLA 81

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +I+P V T+  G AAS G+LLL  G
Sbjct: 82  IYDTMQYIRPDVSTICIGQAASMGSLLLTAG 112

[215][TOP]
>UniRef100_C4FHW5 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Sulfurihydrogenibium yellowstonense SS-5
           RepID=C4FHW5_9AQUI
          Length = 201

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RII +G PI+  +A  V++QLL L + D + DI MYIN PGG 
Sbjct: 16  TPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIYMYINSPGGV 75

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
             + LAIYD M++IKP V T+  G AAS G  LL+ G
Sbjct: 76  VTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAG 112

[216][TOP]
>UniRef100_B5JA06 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Octadecabacter antarcticus 307 RepID=B5JA06_9RHOB
          Length = 209

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 42/92 (45%), Positives = 65/92 (70%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIF+  PI+  ++Q V++QLL L   + + +I MYIN PGG+ +S ++
Sbjct: 25  AYDIFSRLLKERIIFVNGPIHDGMSQLVVAQLLHLEAENPKKEISMYINSPGGAVHSGMS 84

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +I+PKV T++ G+AAS G+++  GGE
Sbjct: 85  IYDTMQYIRPKVSTLICGMAASMGSVIAVGGE 116

[217][TOP]
>UniRef100_A3JUE0 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Rhodobacterales bacterium HTCC2150
           RepID=A3JUE0_9RHOB
          Length = 209

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 45/90 (50%), Positives = 60/90 (66%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L + RIIF+  P++ ++A  +++QLL L   +   +I MYIN PGG   S L+IY
Sbjct: 28  DIFSRLLKERIIFVSGPVHDEMATTIVAQLLFLEADNPTKEIAMYINSPGGVVTSGLSIY 87

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           D M +IKPKV TV  G AAS G+LLLA GE
Sbjct: 88  DTMQYIKPKVSTVCIGQAASMGSLLLAAGE 117

[218][TOP]
>UniRef100_A1HP68 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermosinus
           carboxydivorans Nor1 RepID=A1HP68_9FIRM
          Length = 203

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 47/91 (51%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RI+FIG PI+  VA  VI+QLL L + D + DI +YIN PGG   + LA
Sbjct: 17  AYDIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPGGVVTAGLA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IKP V T+  G AAS   +LLA G
Sbjct: 77  IYDTMQYIKPDVSTICLGSAASMAAVLLAAG 107

[219][TOP]
>UniRef100_B7FTX1 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Phaeodactylum tricornutum CCAP 1055/1
           RepID=B7FTX1_PHATR
          Length = 260

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
 Frame = +2

Query: 266 PPVSPAIMT---PGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDIL 436
           PP +P + T     G LD+ S L ++RI+ +G  +N +VA  +++QLL LA  D   DI 
Sbjct: 55  PPRAPPLPTVDGKSGQLDVVSRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPNKDIT 114

Query: 437 MYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           +YIN PGGS  + LAIYD M +I   V TV FG+AAS G  LL  G
Sbjct: 115 LYINSPGGSVSAGLAIYDTMKFIPCDVQTVCFGMAASMGAFLLGAG 160

[220][TOP]
>UniRef100_B9EAG5 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Macrococcus
           caseolyticus JCSC5402 RepID=CLPP_MACCJ
          Length = 194

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 46/91 (50%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RII +G  I+  VA  ++SQLL L   D E DI +YIN PGGS  + +A
Sbjct: 17  AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  IKP V T+  G+AAS G+ LLA G
Sbjct: 77  IYDTMQHIKPDVQTICIGMAASMGSFLLAAG 107

[221][TOP]
>UniRef100_A9IR54 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bordetella
           petrii DSM 12804 RepID=CLPP_BORPD
          Length = 217

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 43/92 (46%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R R+IF+  P+N   A  +++QLL L + + + DI +YIN PGGS Y+ +A
Sbjct: 38  AYDIYSRLLRERLIFLVGPVNDNTANLIVAQLLFLESENPDKDISLYINSPGGSVYAGMA 97

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M ++KP V T+  G+AAS G  LLA G+
Sbjct: 98  IYDTMQFVKPDVSTLCTGLAASMGAFLLAAGK 129

[222][TOP]
>UniRef100_Q7WK83 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Bordetella
           RepID=CLPP_BORBR
          Length = 217

 Score = 88.6 bits (218), Expect = 3e-16
 Identities = 45/92 (48%), Positives = 60/92 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R R+IF+  P+N   A  V++QLL L + + + DI  YIN PGGS Y+ +A
Sbjct: 38  AYDIYSRLLRERLIFLVGPVNDNTANLVVAQLLFLESENPDKDISFYINSPGGSVYAGMA 97

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V T+  G+AAS G  LLA G+
Sbjct: 98  IYDTMQFIKPDVSTLCTGLAASMGAFLLAAGK 129

[223][TOP]
>UniRef100_UPI00016955B0 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Paenibacillus larvae subsp. larvae BRL-230010
           RepID=UPI00016955B0
          Length = 196

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 46/89 (51%), Positives = 59/89 (66%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIFIG  I+  V   VI+QLL L+  D + DI +YIN PGGS  + L IY
Sbjct: 19  DIYSRLLKDRIIFIGSAIDDDVVNLVIAQLLFLSAQDADKDIHLYINSPGGSVTAGLGIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M +IKP V T+  G+AAS G+LLL  G
Sbjct: 79  DTMQYIKPDVSTICVGMAASMGSLLLTAG 107

[224][TOP]
>UniRef100_Q118P5 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q118P5_TRIEI
          Length = 231

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
 Frame = +2

Query: 257 SGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
           SG   + P ++   G    A DL S L R RIIF+G  ++  +A  + +Q+L L   D E
Sbjct: 23  SGPSNIVPMVVEQSGMGERAFDLYSRLLRERIIFLGTQVDENLANTITAQMLFLDAEDPE 82

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            DI +YIN PGGS  + +AIYD M  ++P V T+ +G+AAS G  LL+GG
Sbjct: 83  KDIQLYINSPGGSVTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLLSGG 132

[225][TOP]
>UniRef100_B7IHX6 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermosipho
           africanus TCF52B RepID=B7IHX6_THEAB
          Length = 201

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 46/91 (50%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RI+F+G  I+  VA  V++QLL L   D + DI +YIN PGGS  + LA
Sbjct: 22  AYDIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVSAGLA 81

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +IK  V T+  G AAS G +LLAGG
Sbjct: 82  IYDTMQYIKCDVATICIGQAASMGAVLLAGG 112

[226][TOP]
>UniRef100_Q2CBY9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oceanicola
           granulosus HTCC2516 RepID=Q2CBY9_9RHOB
          Length = 209

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 45/92 (48%), Positives = 62/92 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIF+  P++  +A  +++QL+ L   + + +I MYIN PGG   S L+
Sbjct: 25  AYDIFSRLLKERIIFLNGPVHDGMASLIVAQLIHLEAENPKKEISMYINSPGGVVTSGLS 84

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKP V T+V G AAS G+LLLAGGE
Sbjct: 85  IYDTMQYIKPPVSTLVIGQAASMGSLLLAGGE 116

[227][TOP]
>UniRef100_C5RPD9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium
           cellulovorans 743B RepID=C5RPD9_CLOCL
          Length = 194

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 43/89 (48%), Positives = 61/89 (68%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RI+F+G+ +N   A  V++QLL L + D + DI +YIN PGGS  + +AIY
Sbjct: 19  DIYSRLLKDRIVFLGEEVNDASASVVVAQLLFLESEDPDKDISLYINSPGGSITAGMAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M++IKP V T+  G+AAS G  LLA G
Sbjct: 79  DTMNYIKPDVATICIGMAASMGAFLLAAG 107

[228][TOP]
>UniRef100_C0YIC4 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIC4_9FLAO
          Length = 228

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 47/91 (51%), Positives = 59/91 (64%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G  I+ QVA  V +QLL L + D   DI +YIN PGGS Y+ L I
Sbjct: 49  MDVFSRLMMDRIIFLGTGIDDQVANIVTAQLLFLESADPSKDIQIYINSPGGSVYAGLGI 108

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           YD M  IKP V T+  G+AAS G +LL  GE
Sbjct: 109 YDTMQIIKPDVATICTGMAASMGAVLLVAGE 139

[229][TOP]
>UniRef100_A8UR95 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UR95_9AQUI
          Length = 201

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 46/97 (47%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RI+ +G PI+  VA  +++QLL L + D + DI +YIN PGGS
Sbjct: 18  TPRGERAYDIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPGGS 77

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
             + +A+YD M +IKP V T+  G AAS G +LLA G
Sbjct: 78  VTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAG 114

[230][TOP]
>UniRef100_A1ZSL8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microscilla
           marina ATCC 23134 RepID=A1ZSL8_9SPHI
          Length = 195

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 42/90 (46%), Positives = 61/90 (67%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G  ++  VA  + +QLL L ++D + DIL+YIN PGGS Y+ L I
Sbjct: 16  IDVFSRLISDRIIFLGTAVDDNVANVITAQLLFLESVDAKKDILLYINSPGGSVYAGLGI 75

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M ++ P + T+  G+AAS G +LL GG
Sbjct: 76  YDTMQYVGPDIATICTGMAASFGAVLLTGG 105

[231][TOP]
>UniRef100_A8INX1 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Chlamydomonas reinhardtii RepID=A8INX1_CHLRE
          Length = 283

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
 Frame = +2

Query: 227 STTSYGAIEASG---NPPVSPAIMTPGGA----LDLSSVLFRNRIIFIGQPINGQVAQRV 385
           S +S   +EA G   +P V+P I    G     +DL   L  NRIIFIG  IN ++A ++
Sbjct: 42  SRSSRRNVEARGIRRSPVVTPDIQIGHGEDAIEMDLYRYLLSNRIIFIGGYINDKMATQI 101

Query: 386 ISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLL 565
           +  L+ L  +DE  DI +YIN PGG  YSVL + D M  IKP V TV  G   S  +L++
Sbjct: 102 VGSLMALEAVDENEDIRIYINSPGGQPYSVLGVVDAMQSIKPDVQTVALGACYSYASLVV 161

Query: 566 AGG 574
           A G
Sbjct: 162 AAG 164

[232][TOP]
>UniRef100_Q5FFG7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ehrlichia
           ruminantium str. Gardel RepID=CLPP_EHRRG
          Length = 198

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 45/92 (48%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ + L + RIIFI  PI  Q+A  V++QL+ L   + E DI MYIN PGG   + L+
Sbjct: 17  AYDIYTRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDISMYINSPGGVVTAGLS 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M ++KP++ T+  G AAS G+LLLA GE
Sbjct: 77  IYDTMQYVKPRIATLCLGQAASMGSLLLAAGE 108

[233][TOP]
>UniRef100_Q8M9Y9 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Chaetosphaeridium globosum RepID=CLPP_CHAGL
          Length = 201

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 39/91 (42%), Positives = 63/91 (69%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +DL + L+R RI+F+GQ +N ++A ++I  +L L   D+  D+ +YIN PGG+    +AI
Sbjct: 21  IDLYNRLYRERILFLGQTVNYEIANQIIGLMLYLNGDDKSKDMYLYINSPGGAVVPGIAI 80

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           YD M +++P++ T+  GVAAS G+ +L GGE
Sbjct: 81  YDTMQFVEPEIRTICMGVAASMGSFILTGGE 111

[234][TOP]
>UniRef100_UPI00016C6586 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Clostridium
           difficile QCD-63q42 RepID=UPI00016C6586
          Length = 194

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 44/89 (49%), Positives = 58/89 (65%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G  +N   A  +++QLL L   D + DI +YIN PGGS  S +AIY
Sbjct: 19  DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M +IKP V T+  G+AAS G  LLA G
Sbjct: 79  DTMQYIKPDVSTICIGMAASMGAFLLAAG 107

[235][TOP]
>UniRef100_Q115M5 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q115M5_TRIEI
          Length = 203

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 42/91 (46%), Positives = 61/91 (67%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R+RII++G+ I+ ++A  ++ QLL L + D E DI +YIN PGGS  + + 
Sbjct: 15  AFDIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYLYINSPGGSVSAGMG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M  ++P V T+  G+AAS G  LL+GG
Sbjct: 75  IYDTMRHVRPDVCTICMGIAASMGAFLLSGG 105

[236][TOP]
>UniRef100_C1DTD6 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Sulfurihydrogenibium azorense Az-Fu1
           RepID=C1DTD6_SULAA
          Length = 202

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
 Frame = +2

Query: 290 TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGS 463
           TP G  A D+ S L ++RII +G PI+  VA  +++QLL L   D E DI MYIN PGG 
Sbjct: 16  TPRGERAYDIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDIYMYINSPGGV 75

Query: 464 TYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
             +  AIYD M++IKP V T+  G AAS G  LL+ G
Sbjct: 76  VTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAG 112

[237][TOP]
>UniRef100_A6H1C3 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Flavobacterium psychrophilum JIP02/86
           RepID=A6H1C3_FLAPJ
          Length = 233

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 50/110 (45%), Positives = 65/110 (59%), Gaps = 9/110 (8%)
 Frame = +2

Query: 272 VSPAIMTPG---------GALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
           +SP  MTP            LD+ S L  +RIIF+G  I+ Q+A  V +QLL L + D  
Sbjct: 39  MSPTNMTPYIIEERQLNISQLDVFSRLMMDRIIFLGTGIDDQIANIVQAQLLFLESADAS 98

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            DI +Y+N PGGS Y+ L IYD M +IKP V T+  G+AAS G +LL  G
Sbjct: 99  KDIQIYLNSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASMGAVLLCAG 148

[238][TOP]
>UniRef100_A4XAI1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Salinispora
           tropica CNB-440 RepID=A4XAI1_SALTO
          Length = 213

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 7/110 (6%)
 Frame = +2

Query: 266 PPVSPAIMTPGGALDLSSV-------LFRNRIIFIGQPINGQVAQRVISQLLTLATIDEE 424
           PP  P  +   G  ++ ++       L + RIIF+G  +  QVA R+ +QLL LA  D +
Sbjct: 7   PPTPPRAIDARGGDNIGNLDDSVYNRLLKERIIFLGSEVTDQVANRICAQLLLLAAEDPD 66

Query: 425 SDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
            DI ++IN PGGS YS +AIYD M +I   V TV  G+AAS G LLL  G
Sbjct: 67  RDINLWINSPGGSVYSGMAIYDTMQFIDNDVSTVAMGMAASMGQLLLCAG 116

[239][TOP]
>UniRef100_C9XRQ5 ATP-dependent Clp protease proteolytic subunit n=3 Tax=Clostridium
           difficile RepID=C9XRQ5_CLODI
          Length = 194

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 44/89 (49%), Positives = 58/89 (65%)
 Frame = +2

Query: 308 DLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIY 487
           D+ S L ++RIIF+G  +N   A  +++QLL L   D + DI +YIN PGGS  S +AIY
Sbjct: 19  DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIHLYINSPGGSITSGMAIY 78

Query: 488 DCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           D M +IKP V T+  G+AAS G  LLA G
Sbjct: 79  DTMQYIKPDVSTICIGMAASMGAFLLAAG 107

[240][TOP]
>UniRef100_C7DD00 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Thalassiobium sp. R2A62 RepID=C7DD00_9RHOB
          Length = 209

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 45/92 (48%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RIIF+  P++  ++Q +++QLL L   +   +I MYIN PGG   S L+
Sbjct: 25  AYDIFSRLLKERIIFLNGPVHDGMSQLIVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 84

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+V G AAS G+LLL  GE
Sbjct: 85  IYDTMQYIKPKVSTLVIGQAASMGSLLLTAGE 116

[241][TOP]
>UniRef100_C6X674 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Flavobacteriaceae bacterium 3519-10
           RepID=C6X674_FLAB3
          Length = 228

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 47/91 (51%), Positives = 59/91 (64%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G  I+ QVA  V +QLL L + D   DI +YIN PGGS Y+ L I
Sbjct: 49  MDVFSRLMMDRIIFLGTGIDDQVANIVTAQLLFLESSDASKDIQIYINSPGGSVYAGLGI 108

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           YD M  IKP V T+  G+AAS G +LL  GE
Sbjct: 109 YDTMQIIKPDVSTICTGMAASMGAVLLVAGE 139

[242][TOP]
>UniRef100_C0BI63 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Flavobacteria bacterium MS024-2A RepID=C0BI63_9BACT
          Length = 221

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 48/119 (40%), Positives = 67/119 (56%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPGGALDLSSVLFRNRIIFIGQPINGQVAQRVISQL 397
           H +++  Y  I +S  P +          +D+ S L  +RI+F+G  I+  VA  + +QL
Sbjct: 15  HGINSMYYDNIVSSMTPYIIEERQMNVAQMDVFSRLMMDRIMFLGTGIDDNVANIIQAQL 74

Query: 398 LTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           L L + D   DI MYIN PGGS Y+ L IYD M +I P V T+  G+AAS G +LL  G
Sbjct: 75  LFLQSTDANRDIQMYINSPGGSVYAGLGIYDTMQFISPNVATICTGIAASMGAVLLCAG 133

[243][TOP]
>UniRef100_B9CKM1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Atopobium
           rimae ATCC 49626 RepID=B9CKM1_9ACTN
          Length = 206

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
 Frame = +2

Query: 263 NPPVSPAIM--TPGG--ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESD 430
           N P+ P ++  TP G  + D+ S L  +RI+F+G+P+    A  VI+QLL L + D E D
Sbjct: 6   NTPLIPYVIEQTPRGERSYDIYSRLLNDRIVFLGEPVTRDSANLVIAQLLHLESQDPEKD 65

Query: 431 ILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           I +YI+ PGG  Y+ L I D M++IKP V T+  G+AAS   +LLA G
Sbjct: 66  ISLYIDSPGGDVYAGLGILDTMNFIKPDVSTICVGMAASMAAVLLAAG 113

[244][TOP]
>UniRef100_A0YWC9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Lyngbya sp.
           PCC 8106 RepID=A0YWC9_9CYAN
          Length = 203

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 43/91 (47%), Positives = 59/91 (64%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L R+RIIF+GQ +   +A  +++Q+L L   D E DI +YIN PGGS  + L 
Sbjct: 15  AFDIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYLYINSPGGSVSAGLG 74

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M+ I+P V T+  G+AAS G  LL+ G
Sbjct: 75  IYDTMNHIRPDVSTICIGLAASMGAFLLSAG 105

[245][TOP]
>UniRef100_A8LJA8 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Dinoroseobacter shibae DFL 12 RepID=CLPP_DINSH
          Length = 208

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 45/92 (48%), Positives = 61/92 (66%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L + RI+F+  P++  ++Q V++QLL L   +   +I MYIN PGG   S L+
Sbjct: 25  AYDIFSRLLKERIVFVNGPVHDGMSQLVVAQLLHLEAENPSKEISMYINSPGGVVTSGLS 84

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGGE 577
           IYD M +IKPKV T+V G AAS G+LLL  GE
Sbjct: 85  IYDTMQYIKPKVSTLVVGQAASMGSLLLTAGE 116

[246][TOP]
>UniRef100_C0QGT0 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Desulfobacterium autotrophicum HRM2 RepID=CLPP_DESAH
          Length = 205

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 45/91 (49%), Positives = 60/91 (65%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RIIF+G  ++ +VA  +++QLL L + D E DI  YIN PGG   + +A
Sbjct: 17  AYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMA 76

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           +YD M +IKP V TV  G AAS G LLLA G
Sbjct: 77  VYDTMQYIKPDVATVCIGQAASMGALLLAAG 107

[247][TOP]
>UniRef100_B3R4W1 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Cupriavidus
           RepID=CLPP_CUPTR
          Length = 216

 Score = 87.8 bits (216), Expect = 5e-16
 Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
 Frame = +2

Query: 224 VSTTSYGAIEASGNPPVSPAIMTPGG----ALDLSSVLFRNRIIFIGQPINGQVAQRVIS 391
           ++TT   A+E  G   V P ++   G    A D+ S L + R++F+   +N Q A  V++
Sbjct: 10  LATTQASALETQGLGLV-PMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVA 68

Query: 392 QLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQGTLLLAG 571
           QLL L + + + D+ +YIN PGGS  + LAIYD M +IKP V T+  G+AAS G  LLA 
Sbjct: 69  QLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAA 128

Query: 572 G 574
           G
Sbjct: 129 G 129

[248][TOP]
>UniRef100_B3ETG1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus
           Amoebophilus asiaticus 5a2 RepID=B3ETG1_AMOA5
          Length = 224

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 41/90 (45%), Positives = 60/90 (66%)
 Frame = +2

Query: 305 LDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAI 484
           +D+ S L  +RIIF+G P++  ++  +++QLL L + D + D+ +YIN PGGS Y  L I
Sbjct: 47  IDVFSRLIMDRIIFLGMPVDDHISNIIVAQLLFLESTDPKKDVRLYINSPGGSVYPGLGI 106

Query: 485 YDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           YD M +I P V T+  G+AAS   +LLAGG
Sbjct: 107 YDTMQYIAPDVHTICTGLAASMAAVLLAGG 136

[249][TOP]
>UniRef100_B1I4R4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus
           Desulforudis audaxviator MP104C RepID=B1I4R4_DESAP
          Length = 198

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 46/91 (50%), Positives = 58/91 (63%)
 Frame = +2

Query: 302 ALDLSSVLFRNRIIFIGQPINGQVAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLA 481
           A D+ S L ++RI+FIG PI   VA  +I+QLL L   D + DI +YIN PGG   S +A
Sbjct: 18  AYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKDIHLYINSPGGLVTSGMA 77

Query: 482 IYDCMSWIKPKVGTVVFGVAASQGTLLLAGG 574
           IYD M +I+P V T+  G AAS G  LLA G
Sbjct: 78  IYDTMQYIRPDVSTICLGQAASFGAFLLAAG 108

[250][TOP]
>UniRef100_A5FJ87 ATP-dependent Clp protease proteolytic subunit n=1
           Tax=Flavobacterium johnsoniae UW101 RepID=A5FJ87_FLAJ1
          Length = 224

 Score = 87.4 bits (215), Expect = 7e-16
 Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
 Frame = +2

Query: 218 HDVSTTSYGAIEASGNPPVSPAIMTPG---------GALDLSSVLFRNRIIFIGQPINGQ 370
           H V+   Y  I ++    ++P  +TP            LD+ S L  +RIIF+G  I+ Q
Sbjct: 15  HGVNAMYYDKIISA----MTPTNLTPNIIEERQLNVSILDVFSRLMMDRIIFLGTGIDDQ 70

Query: 371 VAQRVISQLLTLATIDEESDILMYINCPGGSTYSVLAIYDCMSWIKPKVGTVVFGVAASQ 550
           +A  V +QLL L + D   DI +Y+N PGGS Y+ L IYD M +IKP V T+  G+AAS 
Sbjct: 71  IANVVQAQLLFLESADASKDIQIYLNSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASM 130

Query: 551 GTLLLAGG 574
           G +LL  G
Sbjct: 131 GAVLLCAG 138