BB905904 ( RCE04049 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  345 bits (885), Expect = 1e-93
 Identities = 163/187 (87%), Positives = 172/187 (91%)
 Frame = +1

Query: 1   GLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVD 180
           GLPFN+  A  K++LTD  +  YI +AN FFNDYPTLLFTRNHISKR G LKVRPVYAVD
Sbjct: 274 GLPFNMQFACPKSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPVYAVD 333

Query: 181 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 360
           DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSSYDQR
Sbjct: 334 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYDQR 393

Query: 361 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 540
           LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMT
Sbjct: 394 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMT 453

Query: 541 FLLPDGY 561
           FLLPDGY
Sbjct: 454 FLLPDGY 460

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  245 bits (626), Expect = 1e-63
 Identities = 113/162 (69%), Positives = 132/162 (81%), Gaps = 4/162 (2%)
 Frame = +1

Query: 88  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCI 255
           F   + T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P      CI
Sbjct: 288 FMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCI 347

Query: 256 MYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQ 435
           MY  ETIRGSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQ
Sbjct: 348 MYSFETIRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQ 407

Query: 436 PTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           PTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+  DG+
Sbjct: 408 PTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGF 449

[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  236 bits (603), Expect = 7e-61
 Identities = 107/171 (62%), Positives = 129/171 (75%)
 Frame = +1

Query: 49  DSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTI 228
           D D          FF   PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL +
Sbjct: 275 DFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLV 334

Query: 229 QARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRS 408
            AR P CCIMYGLETIRGSN +I+  A+ + ++F++DWS YDQRLPR ITD+YYTDFL S
Sbjct: 335 MARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLES 394

Query: 409 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           LI+IN GYQPT +Y  YPDL    ++ RM NLLHFLHTWYNNM ++  DG+
Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGF 445

[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  234 bits (596), Expect = 4e-60
 Identities = 104/159 (65%), Positives = 130/159 (81%)
 Frame = +1

Query: 85  SFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYG 264
           SF    PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK  CCIMYG
Sbjct: 286 SFILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYG 345

Query: 265 LETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 444
            ETIRGSNR I++IA  + +FF++DWS +DQRLPRVITDI+++DFL  +IVI+HGYQPTY
Sbjct: 346 YETIRGSNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTY 405

Query: 445 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           +YP+YPDL   K++ RMDN+L FLHTWYNN+ F+  DG+
Sbjct: 406 DYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGF 444

[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  228 bits (581), Expect = 2e-58
 Identities = 105/187 (56%), Positives = 136/187 (72%)
 Frame = +1

Query: 1   GLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVD 180
           G PF+  +  DK            D   SF    P +LFTRNHIS RDG LK RPVYA+D
Sbjct: 269 GYPFDPSKVPDKG-----------DALRSFILKRPVMLFTRNHISDRDGNLKQRPVYAMD 317

Query: 181 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 360
           D+FI +E  +TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y ++F++DWS +DQR
Sbjct: 318 DLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFDQR 377

Query: 361 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 540
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 378 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 437

Query: 541 FLLPDGY 561
           ++  DG+
Sbjct: 438 YVTADGF 444

[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  218 bits (554), Expect = 3e-55
 Identities = 97/158 (61%), Positives = 124/158 (78%)
 Frame = +1

Query: 88  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 267
           FF   PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP  + ARKP CCIMYGL
Sbjct: 284 FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGL 343

Query: 268 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 447
           ETIRGSN+ +++IA DY +FF++DWS +DQRLP VI  +++T+++  L+V+NHGY PTYE
Sbjct: 344 ETIRGSNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYE 403

Query: 448 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           YP+YPDL  + +  R+ NL+ FL TWY NM F+  DG+
Sbjct: 404 YPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGF 441

[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  187 bits (475), Expect = 5e-46
 Identities = 79/127 (62%), Positives = 105/127 (82%)
 Frame = +1

Query: 181 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 360
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 361 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 540
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 61  LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120

Query: 541 FLLPDGY 561
           ++  DG+
Sbjct: 121 YVTADGF 127

[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  186 bits (473), Expect = 8e-46
 Identities = 86/158 (54%), Positives = 115/158 (72%)
 Frame = +1

Query: 88  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 267
           F   +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGL
Sbjct: 315 FLKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGL 374

Query: 268 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 447
           ETIRGSN  ++ +A+ + +F ++DWS YDQRLP  I   ++  +L SL++I+HGY PT E
Sbjct: 375 ETIRGSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSE 434

Query: 448 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           Y     ++   ++ R  NL++F  TWY NM FL  DG+
Sbjct: 435 YED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGF 471

[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  128 bits (322), Expect = 3e-28
 Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 23/181 (12%)
 Frame = +1

Query: 88  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 267
           +F   PT L  R+HISKRD  LKVRPVY    I+I IE ML +PL  QARK  CCIMYGL
Sbjct: 249 WFKKVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGL 307

Query: 268 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP--- 438
           ETIRG    +E+I+  +++F  +DWS +D   P  I++ ++  +L + I+I+HGY     
Sbjct: 308 ETIRGGMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISN 367

Query: 439 --------------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 558
                               + EY T P+        ++ NL+ FL  WY +M F+ PDG
Sbjct: 368 YHDHVHSFSAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDG 425

Query: 559 Y 561
           +
Sbjct: 426 F 426

[10][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  123 bits (309), Expect = 8e-27
 Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 21/179 (11%)
 Frame = +1

Query: 88  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 267
           +F   PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311

Query: 268 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 447
           ETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + 
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371

Query: 448 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           Y  +                 +L+E         ++++NLL F++TW+  M ++ PDG+
Sbjct: 372 YNDHVHSFAAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGF 430

[11][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  123 bits (309), Expect = 8e-27
 Identities = 67/179 (37%), Positives = 99/179 (55%), Gaps = 21/179 (11%)
 Frame = +1

Query: 88  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 267
           +F   PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311

Query: 268 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 447
           ETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + 
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371

Query: 448 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           Y  +                 +L+E         ++++NLL F++TW+  M ++ PDG+
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGF 430

[12][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  122 bits (306), Expect = 2e-26
 Identities = 67/179 (37%), Positives = 98/179 (54%), Gaps = 21/179 (11%)
 Frame = +1

Query: 88  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 267
           +F   PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYG 
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGF 311

Query: 268 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 447
           ETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+I+ GY   + 
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHN 371

Query: 448 YPTY----------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGY 561
           Y  +                 +L+E         ++++NLL F++TW+  M ++ PDG+
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGF 430

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score = 97.1 bits (240), Expect = 8e-19
 Identities = 60/184 (32%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
 Frame = +1

Query: 103 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 282
           PT+++ R+ ISK    LKVRPVY    +F+++E MLT  L  Q RKP  CI++  ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339

Query: 283 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 456
               + +I+ +++ F   D+S +DQ  P  I   ++  F+  +I ++ GYQ +  Y    
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399

Query: 457 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 549
           Y   D  K Y  +D                             N+L F+  WY  M F+ 
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458

Query: 550 PDGY 561
           PDGY
Sbjct: 459 PDGY 462

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 6/159 (3%)
 Frame = +1

Query: 100 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 273
           Y    F R H+ + D P KVR V+      ++ ELM  +PL +   AR P   +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261

Query: 274 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 441
           + G    +   A D    YST  +LDWS +D+     +    +   +R +     GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321

Query: 442 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 558
             YP  PD +      R++NL +++      +  +LPDG
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDG 356

[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
 Frame = +1

Query: 100 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 273
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289

Query: 274 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 432
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344

Query: 433 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 558
            PT+  PT+P  D  K   R++ L  +L T  N      +LPDG
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDG 385

[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
 Frame = +1

Query: 100 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 273
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233

Query: 274 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 432
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288

Query: 433 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 558
            PT+  PT+P  D  K        L  L   +     +LPDG
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLF-EAPIILPDG 329

[17][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
 Frame = +1

Query: 100 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 276
           YP  + T++ I     P KVR ++ V  + +++E M  +PL    R +    +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258

Query: 277 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 441
            G     N  +        +  SLDWS +D R L  VI D+Y    ++S    N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318

Query: 442 YEYP---TYPDLDEHKLYHRMDNLLHF 513
            +YP   T+P    H L+  M   L F
Sbjct: 319 VDYPDSSTHPQ-KLHNLWDWMLTALKF 344

[18][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +1

Query: 37  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 210
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 211 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 378
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 379 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 552
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 553 DG 558
           DG
Sbjct: 384 DG 385

[19][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +1

Query: 37  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 210
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 211 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 378
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 379 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 552
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 553 DG 558
           DG
Sbjct: 384 DG 385

[20][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +1

Query: 37  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 210
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 211 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 378
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 379 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 552
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 553 DG 558
           DG
Sbjct: 384 DG 385

[21][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +1

Query: 37  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 210
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 211 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 378
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 379 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 552
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 553 DG 558
           DG
Sbjct: 384 DG 385

[22][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 8/182 (4%)
 Frame = +1

Query: 37  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 210
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 211 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 378
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 379 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 552
            I YT  ++S +    GY PT+  P +P  ++ K   +++ L  +L T  N      +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383

Query: 553 DG 558
           DG
Sbjct: 384 DG 385

[23][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
 Frame = +1

Query: 70  IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 237
           +++   FFN +  P LL T+  I K++ P K+R ++     +II E M  +     I+  
Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277

Query: 238 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 396
             +  +++G ET  G         +   I R   +F +LDWS +D+R    ++  I YT 
Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333

Query: 397 FLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 558
            +++ +    GY PT+  PT+P   +  +  R++ L  +L T  N      +LPDG
Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDG 385

[24][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
 Frame = +1

Query: 100 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 261
           Y    F R HI  K+ G L   KVR V+      +  EL+  +PL   +   +    +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296

Query: 262 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 429
           G ETI G   R    ++    T     +LDWS +D+     +    +T  +R      +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356

Query: 430 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 558
           Y PT+ YP  T  D DE  +  R++NL +++      +  L+PDG
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDG 401

[25][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
           partitivirus RepID=A2VA07_9VIRU
          Length = 132

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
 Frame = +1

Query: 106 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 276
           T L +R+H+ + D P K+R V+ V  + +++E M  + +    +        +++G ETI
Sbjct: 8   TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67

Query: 277 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 441
           RG   + I Q+ ++  S+  S DWS +D + L  VI D++  D  +S    N GY+P+
Sbjct: 68  RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123

[26][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
 Frame = +1

Query: 100 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 273
           +P LL T+  I K + P K+R ++     +II E ML +     I+    +  +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289

Query: 274 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 432
             G         Y   I     +F +LDWS +D+R    ++  I Y   +RS +  + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344

Query: 433 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDG 558
            PT+  P +P  +  K   R++ L  +L T  N      +LPDG
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDG 385