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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 226 bits (577), Expect = 7e-58
Identities = 109/187 (58%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
Frame = +2
Query: 26 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 205
IQ+ +TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343
Query: 206 FGWFMVKPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 382
FGWFM+ P K E +PSR+ N+ +K C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403
Query: 383 WAWKHDIEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFGSFAGPVTSG 556
W+W + EA K +S + H R +YDN+YSIPFEFGSFAGPV SG
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFGSFAGPVISG 463
Query: 557 GKPFEAE 577
G P EAE
Sbjct: 464 GTPNEAE 470
[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 222 bits (565), Expect = 2e-56
Identities = 107/191 (56%), Positives = 137/191 (71%), Gaps = 5/191 (2%)
Frame = +2
Query: 20 LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY
Sbjct: 284 LKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYD 343
Query: 200 QRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCI 370
QRF WF + P+ K K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI
Sbjct: 344 QRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCI 403
Query: 371 VHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGP 544
+HF+W ++G++SF +GMG + HHGE + +S ++PFEFGSFAGP
Sbjct: 404 LHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGP 463
Query: 545 VTSGGKPFEAE 577
VTSGG PF +E
Sbjct: 464 VTSGGTPFTSE 474
[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 222 bits (565), Expect = 2e-56
Identities = 107/191 (56%), Positives = 137/191 (71%), Gaps = 5/191 (2%)
Frame = +2
Query: 20 LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY
Sbjct: 1094 LKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYD 1153
Query: 200 QRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCI 370
QRF WF + P+ K K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI
Sbjct: 1154 QRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCI 1213
Query: 371 VHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGP 544
+HF+W ++G++SF +GMG + HHGE + +S ++PFEFGSFAGP
Sbjct: 1214 LHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGP 1273
Query: 545 VTSGGKPFEAE 577
VTSGG PF +E
Sbjct: 1274 VTSGGTPFTSE 1284
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 211 bits (536), Expect = 4e-53
Identities = 100/188 (53%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Frame = +2
Query: 20 LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INYK
Sbjct: 283 LQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYK 342
Query: 200 QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
QRF W +++ K ++ +PSR+ NL K V TNFVNA AI+CATTGMH G C +
Sbjct: 343 QRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTI 402
Query: 374 HFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTS 553
HF+W W H E K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TS
Sbjct: 403 HFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITS 461
Query: 554 GGKPFEAE 577
GGK EAE
Sbjct: 462 GGKADEAE 469
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 211 bits (536), Expect = 4e-53
Identities = 100/188 (53%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Frame = +2
Query: 20 LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INYK
Sbjct: 1120 LQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYK 1179
Query: 200 QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
QRF W +++ K ++ +PSR+ NL K V TNFVNA AI+CATTGMH G C +
Sbjct: 1180 QRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTI 1239
Query: 374 HFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTS 553
HF+W W H E K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TS
Sbjct: 1240 HFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITS 1298
Query: 554 GGKPFEAE 577
GGK EAE
Sbjct: 1299 GGKADEAE 1306
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 190 bits (482), Expect = 8e-47
Identities = 91/190 (47%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Frame = +2
Query: 20 LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI+++ LC++INY
Sbjct: 1116 LQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYN 1175
Query: 200 QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
Q F WFM++ + +P+R++NL K V TNFVNA AIMCATTGMH+GKC +
Sbjct: 1176 QHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNALAIMCATTGMHFGKCTL 1235
Query: 374 HFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
HF+W W + + G +S TGMG V H G F S+S+PF+FGSFAGP+
Sbjct: 1236 HFSWGWYRG-KLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYPATSFSLPFQFGSFAGPI 1294
Query: 548 TSGGKPFEAE 577
+ GG P AE
Sbjct: 1295 SCGGAPMAAE 1304
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 187 bits (476), Expect = 4e-46
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Frame = +2
Query: 20 LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY
Sbjct: 283 LQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYN 342
Query: 200 QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
Q F WFM++ + +P+R++NL K V TNFVNA AIMCATTGMH+GKC +
Sbjct: 343 QHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTL 402
Query: 374 HFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
HF+W W + + G S TGMG V H G F+ ++S+PF+FGSFAGP+
Sbjct: 403 HFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPI 461
Query: 548 TSGGKPFEAE 577
+ GG+P AE
Sbjct: 462 SCGGEPMAAE 471
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 187 bits (476), Expect = 4e-46
Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Frame = +2
Query: 20 LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY
Sbjct: 1115 LQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYN 1174
Query: 200 QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
Q F WFM++ + +P+R++NL K V TNFVNA AIMCATTGMH+GKC +
Sbjct: 1175 QHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTL 1234
Query: 374 HFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
HF+W W + + G S TGMG V H G F+ ++S+PF+FGSFAGP+
Sbjct: 1235 HFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPI 1293
Query: 548 TSGGKPFEAE 577
+ GG+P AE
Sbjct: 1294 SCGGEPMAAE 1303
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 182 bits (461), Expect = 2e-44
Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Frame = +2
Query: 5 GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+
Sbjct: 103 GVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCR 162
Query: 185 QINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWG 361
INYKQ FGWF +V+ +KE + +PSR++N+ K + N VNAF+IMCATTGM WG
Sbjct: 163 AINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWG 222
Query: 362 K-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFA 538
+H H +A K S G+ T+ H G+ ++ + S IPFE GSFA
Sbjct: 223 SPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFA 277
Query: 539 GPVTSGGKPFEAE 577
GPVTSGG PFE+E
Sbjct: 278 GPVTSGGTPFESE 290
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 182 bits (461), Expect = 2e-44
Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Frame = +2
Query: 5 GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+
Sbjct: 1123 GVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCR 1182
Query: 185 QINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWG 361
INYKQ FGWF +V+ +KE + +PSR++N+ K + N VNAF+IMCATTGM WG
Sbjct: 1183 AINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWG 1242
Query: 362 K-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFA 538
+H H +A K S G+ T+ H G+ ++ + S IPFE GSFA
Sbjct: 1243 SPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFA 1297
Query: 539 GPVTSGGKPFEAE 577
GPVTSGG PFE+E
Sbjct: 1298 GPVTSGGTPFESE 1310
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 117 bits (293), Expect = 6e-25
Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
Frame = +2
Query: 5 GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + +L I+ FY+++ +G GA + L SPM+P +++ F+ +I G +C+
Sbjct: 290 GVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCR 349
Query: 185 QINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGK 364
IN+ QRFGWF V+P ++ + ++L + + T + NAF MC T+ MH+G
Sbjct: 350 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 409
Query: 365 CIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
I+HF+W + A+ G ++ G G ++ + G R FSIY+ ++P E G+FA
Sbjct: 410 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFA 469
Query: 539 GP 544
GP
Sbjct: 470 GP 471
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 115 bits (288), Expect = 2e-24
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Frame = +2
Query: 5 GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+
Sbjct: 278 GVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCR 337
Query: 185 QINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGK 364
IN+ QRFGWF V+P ++ + ++L + + T + NAF MC T+ MH+G
Sbjct: 338 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 397
Query: 365 CIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
I+HF+W + A+ G ++ G G ++ + G R SIY+ ++P E G+FA
Sbjct: 398 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFA 457
Query: 539 GP 544
GP
Sbjct: 458 GP 459
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 115 bits (288), Expect = 2e-24
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Frame = +2
Query: 5 GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
G + +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+
Sbjct: 961 GVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCR 1020
Query: 185 QINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGK 364
IN+ QRFGWF V+P ++ + ++L + + T + NAF MC T+ MH+G
Sbjct: 1021 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 1080
Query: 365 CIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
I+HF+W + A+ G ++ G G ++ + G R SIY+ ++P E G+FA
Sbjct: 1081 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFA 1140
Query: 539 GP 544
GP
Sbjct: 1141 GP 1142
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 65.5 bits (158), Expect = 3e-09
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P
Sbjct: 290 GQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPP 349
Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 468 YAGATPSG 475
[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 63.5 bits (153), Expect = 1e-08
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Frame = +2
Query: 8 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 181
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 182 KQINYKQRFGWFM---VKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGM 352
+ + + WF +KP+ +P + + K T N + + A TG
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGW 408
Query: 353 HWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFG 529
H+G+ V +W +A +G++S T + G+ R++ + IP G
Sbjct: 409 HYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLG 466
Query: 530 SFAGPVTSG 556
S+AG SG
Sbjct: 467 SYAGATPSG 475
[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 62.4 bits (150), Expect = 2e-08
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 468 YAGATPSG 475
[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 62.0 bits (149), Expect = 3e-08
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347
Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 407
Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 408 YGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 465
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 466 YAGATPSG 473
[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 62.0 bits (149), Expect = 3e-08
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935
Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 936 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 995
Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 996 YGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 1053
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 1054 YAGATPSG 1061
[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 59.7 bits (143), Expect = 2e-07
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Frame = +2
Query: 8 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
G E+ ++ +S++ + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
+G+ V +W +A +G++S T + G+ R++ + IP GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467
Query: 533 FAGPVTSG 556
+AG SG
Sbjct: 468 YAGATPSG 475