BB905727 ( RCE03850 )

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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  226 bits (577), Expect = 7e-58
 Identities = 109/187 (58%), Positives = 131/187 (70%), Gaps = 3/187 (1%)
 Frame = +2

Query: 26  IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 205
           IQ+   +TANFG  GA+FW++PLS+P AP+ VE+KFEFYIRI GID  PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343

Query: 206 FGWFMVKPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 382
           FGWFM+ P  K   E    +PSR+ N+ +K   C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403

Query: 383 WAWKHDIEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFGSFAGPVTSG 556
           W+W  + EA K    +S         + H     R   +YDN+YSIPFEFGSFAGPV SG
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFGSFAGPVISG 463

Query: 557 GKPFEAE 577
           G P EAE
Sbjct: 464 GTPNEAE 470

[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  222 bits (565), Expect = 2e-56
 Identities = 107/191 (56%), Positives = 137/191 (71%), Gaps = 5/191 (2%)
 Frame = +2

Query: 20  LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
           L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY 
Sbjct: 284 LKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYD 343

Query: 200 QRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCI 370
           QRF WF +   P+ K  K  ++ +PSRV N+  K    TN+VNAFAIMCATTGMH GKCI
Sbjct: 344 QRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCI 403

Query: 371 VHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGP 544
           +HF+W          ++G++SF +GMG   +  HHGE  +     +S ++PFEFGSFAGP
Sbjct: 404 LHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGP 463

Query: 545 VTSGGKPFEAE 577
           VTSGG PF +E
Sbjct: 464 VTSGGTPFTSE 474

[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  222 bits (565), Expect = 2e-56
 Identities = 107/191 (56%), Positives = 137/191 (71%), Gaps = 5/191 (2%)
 Frame = +2

Query: 20   LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
            L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY 
Sbjct: 1094 LKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYD 1153

Query: 200  QRFGWFMV--KPEGK-DKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCI 370
            QRF WF +   P+ K  K  ++ +PSRV N+  K    TN+VNAFAIMCATTGMH GKCI
Sbjct: 1154 QRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCI 1213

Query: 371  VHFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGP 544
            +HF+W          ++G++SF +GMG   +  HHGE  +     +S ++PFEFGSFAGP
Sbjct: 1214 LHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGP 1273

Query: 545  VTSGGKPFEAE 577
            VTSGG PF +E
Sbjct: 1274 VTSGGTPFTSE 1284

[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  211 bits (536), Expect = 4e-53
 Identities = 100/188 (53%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
 Frame = +2

Query: 20  LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
           L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+YI+I GI++ P LC++INYK
Sbjct: 283 LQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYK 342

Query: 200 QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
           QRF W +++     K    ++ +PSR+ NL  K V  TNFVNA AI+CATTGMH G C +
Sbjct: 343 QRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTI 402

Query: 374 HFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTS 553
           HF+W W H  E  K  G L F  GMG  + H G+T  ++   N++S+PF+FGSFAGP+TS
Sbjct: 403 HFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITS 461

Query: 554 GGKPFEAE 577
           GGK  EAE
Sbjct: 462 GGKADEAE 469

[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  211 bits (536), Expect = 4e-53
 Identities = 100/188 (53%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
 Frame = +2

Query: 20   LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
            L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+YI+I GI++ P LC++INYK
Sbjct: 1120 LQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYK 1179

Query: 200  QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
            QRF W +++     K    ++ +PSR+ NL  K V  TNFVNA AI+CATTGMH G C +
Sbjct: 1180 QRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTI 1239

Query: 374  HFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTS 553
            HF+W W H  E  K  G L F  GMG  + H G+T  ++   N++S+PF+FGSFAGP+TS
Sbjct: 1240 HFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITS 1298

Query: 554  GGKPFEAE 577
            GGK  EAE
Sbjct: 1299 GGKADEAE 1306

[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  190 bits (482), Expect = 8e-47
 Identities = 91/190 (47%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
 Frame = +2

Query: 20   LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
            L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI IHGI+++  LC++INY 
Sbjct: 1116 LQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYN 1175

Query: 200  QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
            Q F WFM++           + +P+R++NL  K V  TNFVNA AIMCATTGMH+GKC +
Sbjct: 1176 QHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNALAIMCATTGMHFGKCTL 1235

Query: 374  HFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
            HF+W W    + +   G +S  TGMG   V  H G    F     S+S+PF+FGSFAGP+
Sbjct: 1236 HFSWGWYRG-KLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYPATSFSLPFQFGSFAGPI 1294

Query: 548  TSGGKPFEAE 577
            + GG P  AE
Sbjct: 1295 SCGGAPMAAE 1304

[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  187 bits (476), Expect = 4e-46
 Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
 Frame = +2

Query: 20  LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
           L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI IHGI  + +LC++INY 
Sbjct: 283 LQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYN 342

Query: 200 QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
           Q F WFM++           + +P+R++NL  K V  TNFVNA AIMCATTGMH+GKC +
Sbjct: 343 QHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTL 402

Query: 374 HFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
           HF+W W    + +   G  S  TGMG   V  H G    F+    ++S+PF+FGSFAGP+
Sbjct: 403 HFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPI 461

Query: 548 TSGGKPFEAE 577
           + GG+P  AE
Sbjct: 462 SCGGEPMAAE 471

[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  187 bits (476), Expect = 4e-46
 Identities = 90/190 (47%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
 Frame = +2

Query: 20   LRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYK 199
            L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI IHGI  + +LC++INY 
Sbjct: 1115 LQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYN 1174

Query: 200  QRFGWFMVK--PEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIV 373
            Q F WFM++           + +P+R++NL  K V  TNFVNA AIMCATTGMH+GKC +
Sbjct: 1175 QHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTL 1234

Query: 374  HFTWAWKHDIEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 547
            HF+W W    + +   G  S  TGMG   V  H G    F+    ++S+PF+FGSFAGP+
Sbjct: 1235 HFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPI 1293

Query: 548  TSGGKPFEAE 577
            + GG+P  AE
Sbjct: 1294 SCGGEPMAAE 1303

[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  182 bits (461), Expect = 2e-44
 Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
 Frame = +2

Query: 5   GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
           G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+YI+I GI++   LC+
Sbjct: 103 GVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCR 162

Query: 185 QINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWG 361
            INYKQ FGWF +V+    +KE  + +PSR++N+  K  +  N VNAF+IMCATTGM WG
Sbjct: 163 AINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWG 222

Query: 362 K-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFA 538
               +H      H  +A   K   S   G+ T+  H G+ ++  +   S  IPFE GSFA
Sbjct: 223 SPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFA 277

Query: 539 GPVTSGGKPFEAE 577
           GPVTSGG PFE+E
Sbjct: 278 GPVTSGGTPFESE 290

[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  182 bits (461), Expect = 2e-44
 Identities = 95/193 (49%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
 Frame = +2

Query: 5    GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
            G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+YI+I GI++   LC+
Sbjct: 1123 GVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCR 1182

Query: 185  QINYKQRFGWF-MVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWG 361
             INYKQ FGWF +V+    +KE  + +PSR++N+  K  +  N VNAF+IMCATTGM WG
Sbjct: 1183 AINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWG 1242

Query: 362  K-CIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFA 538
                +H      H  +A   K   S   G+ T+  H G+ ++  +   S  IPFE GSFA
Sbjct: 1243 SPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFA 1297

Query: 539  GPVTSGGKPFEAE 577
            GPVTSGG PFE+E
Sbjct: 1298 GPVTSGGTPFESE 1310

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  117 bits (293), Expect = 6e-25
 Identities = 59/182 (32%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
 Frame = +2

Query: 5   GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
           G + +L I+  FY+++ +G  GA   +  L SPM+P  +++ F+   +I G      +C+
Sbjct: 290 GVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCR 349

Query: 185 QINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGK 364
            IN+ QRFGWF V+P       ++ +    ++L  + +  T + NAF  MC T+ MH+G 
Sbjct: 350 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 409

Query: 365 CIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
            I+HF+W  +     A+   G ++   G G ++ +  G  R FSIY+   ++P E G+FA
Sbjct: 410 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFA 469

Query: 539 GP 544
           GP
Sbjct: 470 GP 471

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  115 bits (288), Expect = 2e-24
 Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
 Frame = +2

Query: 5   GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
           G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G      +C+
Sbjct: 278 GVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCR 337

Query: 185 QINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGK 364
            IN+ QRFGWF V+P       ++ +    ++L  + +  T + NAF  MC T+ MH+G 
Sbjct: 338 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 397

Query: 365 CIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
            I+HF+W  +     A+   G ++   G G ++ +  G  R  SIY+   ++P E G+FA
Sbjct: 398 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFA 457

Query: 539 GP 544
           GP
Sbjct: 458 GP 459

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  115 bits (288), Expect = 2e-24
 Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
 Frame = +2

Query: 5    GGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCK 184
            G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G      +C+
Sbjct: 961  GVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCR 1020

Query: 185  QINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGK 364
             IN+ QRFGWF V+P       ++ +    ++L  + +  T + NAF  MC T+ MH+G 
Sbjct: 1021 TINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGS 1080

Query: 365  CIVHFTWA-WKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFA 538
             I+HF+W  +     A+   G ++   G G ++ +  G  R  SIY+   ++P E G+FA
Sbjct: 1081 VIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFA 1140

Query: 539  GP 544
            GP
Sbjct: 1141 GP 1142

[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
 Frame = +2

Query: 8   GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
           G  E+ I++ F+S A       +  ++PLS P+AP+     +EF + I+    DSQ  P 
Sbjct: 290 GQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPP 349

Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
           +         F    +KP+         +P  + +   K    T   N  + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409

Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
           +G+  V    +W    +A   +G++S  T       +  G+ R++ +      IP   GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467

Query: 533 FAGPVTSG 556
           +AG   SG
Sbjct: 468 YAGATPSG 475

[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
 Frame = +2

Query: 8   GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 181
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I+    DSQ    
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348

Query: 182 KQINYKQRFGWFM---VKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGM 352
              +  + + WF    +KP+         +P  + +   K    T   N  + + A TG 
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGW 408

Query: 353 HWGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFG 529
           H+G+  V    +W    +A   +G++S  T       +  G+ R++ +      IP   G
Sbjct: 409 HYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLG 466

Query: 530 SFAGPVTSG 556
           S+AG   SG
Sbjct: 467 SYAGATPSG 475

[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
 Frame = +2

Query: 8   GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349

Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
           +         F    +KP+         +P  + +   K    T   N  + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409

Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
           +G+  V    +W    +A   +G++S  T       +  G+ R++ +      IP   GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467

Query: 533 FAGPVTSG 556
           +AG   SG
Sbjct: 468 YAGATPSG 475

[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
 Frame = +2

Query: 8   GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
           G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347

Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
           +         F    +KP+         +P  + +   K    T   N  + + A TG H
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 407

Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
           +G+  V    +W    +A   +G++S  T       +  G+ R++ +      IP   GS
Sbjct: 408 YGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 465

Query: 533 FAGPVTSG 556
           +AG   SG
Sbjct: 466 YAGATPSG 473

[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
 Frame = +2

Query: 8    GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
            G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 876  GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935

Query: 176  LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
            +         F    +KP+         +P  + +   K    T   N  + + A TG H
Sbjct: 936  MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 995

Query: 356  WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
            +G+  V    +W    +A   +G++S  T       +  G+ R++ +      IP   GS
Sbjct: 996  YGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 1053

Query: 533  FAGPVTSG 556
            +AG   SG
Sbjct: 1054 YAGATPSG 1061

[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
 Frame = +2

Query: 8   GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 175
           G  E+  ++  +S++       +  ++PLS P+AP+     +EF + I     DSQ  P 
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349

Query: 176 LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 355
           +         F    +KP+         +P  + +   K    T   N  + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409

Query: 356 WGKCIVHFTWAWKHDIEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGS 532
           +G+  V    +W    +A   +G++S  T       +  G+ R++ +      IP   GS
Sbjct: 410 YGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGS 467

Query: 533 FAGPVTSG 556
           +AG   SG
Sbjct: 468 YAGATPSG 475