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[1][TOP]
>UniRef100_P46279 DNA-directed RNA polymerase II subunit RPB7 n=2 Tax=Glycine max
RepID=RPB7_SOYBN
Length = 176
Score = 276 bits (707), Expect = 6e-73
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
SGDMPNYTTSDGSV
Sbjct: 121 SGDMPNYTTSDGSV 134
[2][TOP]
>UniRef100_B7FHG8 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FHG8_MEDTR
Length = 176
Score = 275 bits (702), Expect = 2e-72
Identities = 132/134 (98%), Positives = 134/134 (100%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
+GDMPNYTTSDGSV
Sbjct: 121 TGDMPNYTTSDGSV 134
[3][TOP]
>UniRef100_B9S3C9 DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative n=1
Tax=Ricinus communis RepID=B9S3C9_RICCO
Length = 176
Score = 272 bits (696), Expect = 1e-71
Identities = 130/134 (97%), Positives = 134/134 (100%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPRYFGRNLR+NLVSKLMKDVEGTCSGRHGFVVA+TGIE++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
SGDMPNYTTSDGSV
Sbjct: 121 SGDMPNYTTSDGSV 134
[4][TOP]
>UniRef100_B9GGV6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GGV6_POPTR
Length = 176
Score = 271 bits (693), Expect = 3e-71
Identities = 129/134 (96%), Positives = 134/134 (100%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPR+FGRNLR+N+VSKLMKDVEGTCSGRHGFVVA+TGIENIGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
+GDMPNYTTSDGSV
Sbjct: 121 TGDMPNYTTSDGSV 134
[5][TOP]
>UniRef100_A5C1N5 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A5C1N5_VITVI
Length = 176
Score = 269 bits (688), Expect = 1e-70
Identities = 128/134 (95%), Positives = 134/134 (100%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPR+FGR+LRDNLV+KL+KDVEGTCSGRHGFVVA+TGIEN+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
SGDMPNYTTSDGSV
Sbjct: 121 SGDMPNYTTSDGSV 134
[6][TOP]
>UniRef100_P38421 DNA-directed RNA polymerase II subunit RPB7 n=2 Tax=Arabidopsis
thaliana RepID=RPB7_ARATH
Length = 176
Score = 264 bits (674), Expect = 4e-69
Identities = 125/134 (93%), Positives = 132/134 (98%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPR+FGRNL++NLVSKLMKDVEGTCSGRHGFVVA+TGI+ IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTIGKGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTGFVTFPVKYQCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
+GDMPNYTTSDGSV
Sbjct: 121 AGDMPNYTTSDGSV 134
[7][TOP]
>UniRef100_B4G147 DNA-directed RNA polymerase II 19 kDa polypeptide n=2
Tax=Andropogoneae RepID=B4G147_MAIZE
Length = 177
Score = 259 bits (662), Expect = 1e-67
Identities = 123/134 (91%), Positives = 132/134 (98%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPR+FG +LRD LVSKL+KDVEGTCSGRHGFVVA+TG+E+IGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
+GTG+VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
SGD+PNYTTSDGSV
Sbjct: 121 SGDVPNYTTSDGSV 134
[8][TOP]
>UniRef100_Q6ATY6 Os05g0400700 protein n=2 Tax=Oryza sativa RepID=Q6ATY6_ORYSJ
Length = 177
Score = 259 bits (661), Expect = 1e-67
Identities = 122/134 (91%), Positives = 132/134 (98%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHIVLERNMQLHPR+FG +LRD LVSKL+KDVEGTCSGRHGFVVA+TG+E++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
+GTG+VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 532 SGDMPNYTTSDGSV 573
SGD+PNYTTSDGSV
Sbjct: 121 SGDVPNYTTSDGSV 134
[9][TOP]
>UniRef100_A9TN64 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TN64_PHYPA
Length = 177
Score = 242 bits (617), Expect = 2e-62
Identities = 114/134 (85%), Positives = 125/134 (93%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHI L+RN+QLHPR+FG +LRD L++KL++DVEGTCSGRHGFVVAVT +E IG GLIR
Sbjct: 1 MFFHIYLDRNLQLHPRHFGPHLRDKLIAKLIQDVEGTCSGRHGFVVAVTAVETIGSGLIR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTGFVTFPVKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDM FQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMAFQ 120
Query: 532 SGDMPNYTTSDGSV 573
S D+PNY TSDGSV
Sbjct: 121 SDDVPNYKTSDGSV 134
[10][TOP]
>UniRef100_Q0PEU5 RNA polymerase II (Fragment) n=1 Tax=Sorbus aucuparia
RepID=Q0PEU5_SORAU
Length = 110
Score = 216 bits (551), Expect = 8e-55
Identities = 103/110 (93%), Positives = 110/110 (100%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
IVLERNMQLHPR+FGRNLR+NLVSKLMKDVEGTCSG+HGFVVA+TGIENIGKG+IRDGTG
Sbjct: 1 IVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGQHGFVVAITGIENIGKGMIRDGTG 60
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 513
FV+FP+KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP
Sbjct: 61 FVSFPMKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 110
[11][TOP]
>UniRef100_UPI00006A4A38 PREDICTED: similar to DNA directed RNA polymerase II polypeptide G
n=1 Tax=Ciona intestinalis RepID=UPI00006A4A38
Length = 172
Score = 165 bits (418), Expect = 2e-39
Identities = 77/135 (57%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G+HGFV+AVT I+NIG GLI+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLETVKQKLFTEVEGTCTGKHGFVIAVTTIDNIGDGLIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +P+KY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP DM+F
Sbjct: 61 PGRGFVLYPIKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPADMKFD 120
Query: 532 -SGDMPNYTTSDGSV 573
P Y T D V
Sbjct: 121 PESHPPCYKTDDEDV 135
[12][TOP]
>UniRef100_C3ZQZ0 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZQZ0_BRAFL
Length = 172
Score = 165 bits (418), Expect = 2e-39
Identities = 78/135 (57%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGVGAIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ FVS H IP DMEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEVGPMSCFVSRHSIPSDMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T+D V
Sbjct: 121 PNSNPPCYKTADEDV 135
[13][TOP]
>UniRef100_A7SAY0 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SAY0_NEMVE
Length = 172
Score = 165 bits (418), Expect = 2e-39
Identities = 78/135 (57%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + KL +VEGTCSG++GF++AVT I+NIG G I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLQTVKQKLFTEVEGTCSGKYGFIIAVTTIDNIGVGHIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+L+AV+T VNK+G F E GP+ FVS H IP DMEF
Sbjct: 61 PGRGFVVYPVKYKAIVFRPFKGEVLDAVITQVNKLGLFTEIGPLSCFVSRHSIPPDMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D V
Sbjct: 121 PNSNPPCYKTKDEDV 135
[14][TOP]
>UniRef100_UPI000155F572 PREDICTED: similar to DNA directed RNA polymerase II polypeptide G
n=1 Tax=Equus caballus RepID=UPI000155F572
Length = 219
Score = 165 bits (417), Expect = 3e-39
Identities = 76/136 (55%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Frame = +1
Query: 169 KMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLI 348
KMF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I
Sbjct: 47 KMFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVI 106
Query: 349 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
+ G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 107 QPGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEF 166
Query: 529 Q-SGDMPNYTTSDGSV 573
+ + P Y T D +
Sbjct: 167 DPNSNPPCYKTMDEDI 182
[15][TOP]
>UniRef100_B5XFX6 DNA-directed RNA polymerase II subunit RPB7 n=3 Tax=Euteleostei
RepID=B5XFX6_SALSA
Length = 172
Score = 164 bits (414), Expect = 6e-39
Identities = 75/135 (55%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T+D +
Sbjct: 121 PNSNPPCYKTTDEDI 135
[16][TOP]
>UniRef100_B0W2B6 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Culex
quinquefasciatus RepID=B0W2B6_CULQU
Length = 173
Score = 163 bits (412), Expect = 1e-38
Identities = 76/135 (56%), Positives = 102/135 (75%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I++IG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPQLIETVKQKLYTEVEGTCTGKYGFVIAVTTIDDIGSGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 528
G GFV +PVKY+ +VFRPFKGE+L+AVVT VNK+G FAE GP+ F+S+H IP DM+F
Sbjct: 61 PGQGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGMFAEIGPLSCFISHHSIPADMQFC 120
Query: 529 QSGDMPNYTTSDGSV 573
+G+ P Y + D V
Sbjct: 121 PNGNPPCYKSKDEDV 135
[17][TOP]
>UniRef100_Q7ZW41 DNA-directed RNA polymerase II subunit RPB7 n=3 Tax=Euteleostomi
RepID=RPB7_DANRE
Length = 172
Score = 163 bits (412), Expect = 1e-38
Identities = 76/135 (56%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D V
Sbjct: 121 PNSNPPCYKTVDEDV 135
[18][TOP]
>UniRef100_P62487 DNA-directed RNA polymerase II subunit RPB7 n=4 Tax=Eutheria
RepID=RPB7_HUMAN
Length = 172
Score = 163 bits (412), Expect = 1e-38
Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D +
Sbjct: 121 PNSNPPCYKTMDEDI 135
[19][TOP]
>UniRef100_C3KIZ3 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Anoplopoma
fimbria RepID=C3KIZ3_9PERC
Length = 172
Score = 162 bits (411), Expect = 1e-38
Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D +
Sbjct: 121 PNSNPPCYKTVDEDI 135
[20][TOP]
>UniRef100_C3KJA5 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Anoplopoma
fimbria RepID=C3KJA5_9PERC
Length = 172
Score = 162 bits (410), Expect = 2e-38
Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGGGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D +
Sbjct: 121 PNSNPPCYKTVDEDI 135
[21][TOP]
>UniRef100_UPI0001923EB2 PREDICTED: similar to DNA directed RNA polymerase II polypeptide G
n=1 Tax=Hydra magnipapillata RepID=UPI0001923EB2
Length = 172
Score = 162 bits (409), Expect = 2e-38
Identities = 77/135 (57%), Positives = 95/135 (70%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + KL +VEGTC+G++GFV+AVT I+NIG G I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLQTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGYIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
GFV +PVKY+ +VFRPFKGE+L+AVVT VNK G F E GP+ F+S H IP DMEF
Sbjct: 61 PSRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKAGLFTEVGPLSCFISRHSIPTDMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ P Y T D V
Sbjct: 121 PNSSPPCYKTHDEEV 135
[22][TOP]
>UniRef100_UPI0000221703 Hypothetical protein CBG04195 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000221703
Length = 197
Score = 162 bits (409), Expect = 2e-38
Identities = 71/135 (52%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 163 NKKMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKG 342
+K MFFH+ L+ + LHP+YFG NL + + +KL +VEGTC+G++GFV+AVT I+ IG G
Sbjct: 21 HKNMFFHLSLDHEVCLHPKYFGPNLNETIKAKLFNEVEGTCTGKYGFVIAVTTIDTIGHG 80
Query: 343 LIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM 522
LI+ G GFV +PV+Y+ +VFRPFKG++++ VVT VNK+G F + GP+ F+S H IP DM
Sbjct: 81 LIQPGRGFVIYPVRYKAIVFRPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDM 140
Query: 523 EFQ-SGDMPNYTTSD 564
EF + + P Y T+D
Sbjct: 141 EFDPNSEKPCYKTND 155
[23][TOP]
>UniRef100_Q17FM2 DNA-directed RNA polymerase II 19 kDa polypeptide rpb7 n=1
Tax=Aedes aegypti RepID=Q17FM2_AEDAE
Length = 173
Score = 162 bits (409), Expect = 2e-38
Identities = 76/135 (56%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I++IG GLI
Sbjct: 1 MFYHISLEHEILLHPRYFGPQLIETVKQKLYTEVEGTCTGKYGFVIAVTTIDDIGSGLIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 528
G GFV +PVKY+ +VFRPFKGE+L+AVVT VNK+G FA+ GP+ F+S+H IP DM+F
Sbjct: 61 PGQGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGMFAQIGPLSCFISHHSIPADMQFC 120
Query: 529 QSGDMPNYTTSDGSV 573
+G+ P Y + D V
Sbjct: 121 PNGNPPCYKSQDEDV 135
[24][TOP]
>UniRef100_C3KGS2 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Anoplopoma
fimbria RepID=C3KGS2_9PERC
Length = 172
Score = 161 bits (408), Expect = 3e-38
Identities = 75/135 (55%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFHHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEVGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D +
Sbjct: 121 PNSNPPCYKTVDEDI 135
[25][TOP]
>UniRef100_C1C4A3 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Rana
catesbeiana RepID=C1C4A3_RANCA
Length = 172
Score = 161 bits (408), Expect = 3e-38
Identities = 75/135 (55%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVV+ VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVSQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D V
Sbjct: 121 PNSNPPCYKTVDEDV 135
[26][TOP]
>UniRef100_C1BND7 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Caligus
rogercresseyi RepID=C1BND7_9MAXI
Length = 172
Score = 161 bits (408), Expect = 3e-38
Identities = 75/135 (55%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI L+ ++LHPRYFG L D + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHICLDHEIRLHPRYFGPTLLDRVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGIIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+L+AVVT VNK+G F E GP F+S H IP DM F
Sbjct: 61 PGNGFVIYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPPSCFISRHSIPADMTFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T++ V
Sbjct: 121 PNSNPPCYKTNNEEV 135
[27][TOP]
>UniRef100_Q9VFB5 Rpb7 n=3 Tax=melanogaster subgroup RepID=Q9VFB5_DROME
Length = 173
Score = 161 bits (407), Expect = 4e-38
Identities = 74/135 (54%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE+ + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I+ IG G+I+
Sbjct: 1 MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 528
G GFV +PVKY+ +VFRPFKGE+L+AVV +NK+G FAE GP+ F+S+H IP DM+F
Sbjct: 61 PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC 120
Query: 529 QSGDMPNYTTSDGSV 573
+G+ P Y + D V
Sbjct: 121 PNGNPPCYKSKDEDV 135
[28][TOP]
>UniRef100_UPI000194E41D PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide G, partial n=1 Tax=Taeniopygia guttata
RepID=UPI000194E41D
Length = 133
Score = 160 bits (406), Expect = 5e-38
Identities = 73/132 (55%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+N+G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNVGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PV+Y+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVRYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSD 564
+ + P Y T D
Sbjct: 121 PNSNPPCYKTVD 132
[29][TOP]
>UniRef100_B5X965 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Salmo salar
RepID=B5X965_SALSA
Length = 172
Score = 160 bits (406), Expect = 5e-38
Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E G + F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGSMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T+D +
Sbjct: 121 PNSNPPCYKTTDEDI 135
[30][TOP]
>UniRef100_B4PS78 GE26402 n=6 Tax=Sophophora RepID=B4PS78_DROYA
Length = 173
Score = 160 bits (406), Expect = 5e-38
Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I+ IG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIGSGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 528
G GFV +PVKY+ +VFRPFKGE+L+AVV +NK+G FAE GP+ F+S+H IP DM+F
Sbjct: 61 PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC 120
Query: 529 QSGDMPNYTTSDGSV 573
+G+ P Y + D V
Sbjct: 121 PNGNPPCYKSKDEDV 135
[31][TOP]
>UniRef100_UPI0000584A92 PREDICTED: similar to Polymerase (RNA) II (DNA directed)
polypeptide G-like n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000584A92
Length = 172
Score = 160 bits (405), Expect = 6e-38
Identities = 73/135 (54%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+H+ LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHVSLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGMIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F + GP+ F+S H IP DMEF
Sbjct: 61 PSRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTDIGPLSCFISRHSIPADMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ P Y T D +
Sbjct: 121 PNSSPPCYKTKDEDI 135
[32][TOP]
>UniRef100_C1DYL5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1DYL5_9CHLO
Length = 185
Score = 160 bits (405), Expect = 6e-38
Identities = 77/136 (56%), Positives = 103/136 (75%), Gaps = 2/136 (1%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LERN+ L PR+FGRN+RD L+ +L +VEG+C+G+HG++V VT NI +G++
Sbjct: 1 MFWHIKLERNIVLEPRFFGRNMRDTLMQRLKHEVEGSCTGKHGYIVMVTDFTNISEGMVT 60
Query: 352 D-GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
D GT F V++ + FRPFKG++L+AVVT VNK GFFAEAGP+ +FVSN LI DDM+F
Sbjct: 61 DDGTARAKFRVEFDAIAFRPFKGQVLDAVVTEVNKFGFFAEAGPMNLFVSNQLISDDMKF 120
Query: 529 QSGDMPN-YTTSDGSV 573
+S D N Y +SD SV
Sbjct: 121 ESIDNANRYVSSDKSV 136
[33][TOP]
>UniRef100_UPI00018ACFE3 RNA polymerase II subunit 7 n=1 Tax=Nasonia vitripennis
RepID=UPI00018ACFE3
Length = 173
Score = 160 bits (404), Expect = 8e-38
Identities = 75/135 (55%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG L D + KL +VEG C+G++GFVVAVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGNCTGKYGFVVAVTTIDNIGAGIIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 528
G GFV +PVKY+ +VFRPFKGE+L+ +VT VNK+G FAE GP+ F+S+H IP DM+F
Sbjct: 61 PGQGFVVYPVKYKAIVFRPFKGEVLDGIVTQVNKVGMFAEIGPLSCFISHHSIPADMQFC 120
Query: 529 QSGDMPNYTTSDGSV 573
+ + P Y + D V
Sbjct: 121 PNVNPPCYKSKDEDV 135
[34][TOP]
>UniRef100_Q3ZBW0 Polymerase (RNA) II (DNA directed) polypeptide G n=1 Tax=Bos taurus
RepID=Q3ZBW0_BOVIN
Length = 172
Score = 159 bits (403), Expect = 1e-37
Identities = 74/135 (54%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++ FV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYCFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D +
Sbjct: 121 PNSNPPCYKTMDEDI 135
[35][TOP]
>UniRef100_B7TJ05 DNA-directed RNA polymerase II polypeptide G n=1 Tax=Ovis aries
RepID=B7TJ05_SHEEP
Length = 172
Score = 159 bits (403), Expect = 1e-37
Identities = 74/135 (54%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVK + +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF
Sbjct: 61 PGRGFVLYPVKSKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T D +
Sbjct: 121 PNSNPPCYKTMDEDI 135
[36][TOP]
>UniRef100_Q9N3C9 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans
RepID=Q9N3C9_CAEEL
Length = 197
Score = 159 bits (403), Expect = 1e-37
Identities = 70/133 (52%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
Frame = +1
Query: 169 KMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLI 348
+MFFH+ L+ + LHP+YFG NL + + KL +VEGTC+G++GFV+AVT I+ IG GLI
Sbjct: 23 RMFFHLSLDHEVCLHPKYFGPNLNETIKMKLFNEVEGTCTGKYGFVIAVTTIDTIGHGLI 82
Query: 349 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
+ G GFV +PV+Y+ +VFRPFKG++++ VVT VNK+G F + GP+ F+S H IP DMEF
Sbjct: 83 QPGRGFVIYPVRYKAIVFRPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDMEF 142
Query: 529 Q-SGDMPNYTTSD 564
+ + P Y T+D
Sbjct: 143 DPNSEKPCYKTND 155
[37][TOP]
>UniRef100_B4JGB3 GH18755 n=3 Tax=Drosophila RepID=B4JGB3_DROGR
Length = 173
Score = 159 bits (403), Expect = 1e-37
Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I+ IG G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDLIGSGVIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 528
G GFV +PVKY+ +VFRPFKGE+L+AVV +NK+G FAE GP+ F+S+H IP DM+F
Sbjct: 61 PGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAEIGPLSCFISHHSIPADMQFC 120
Query: 529 QSGDMPNYTTSDGSV 573
+G+ P Y + D V
Sbjct: 121 PNGNPPCYKSKDEDV 135
[38][TOP]
>UniRef100_A8WWE2 C. briggsae CBR-RPB-7 protein n=1 Tax=Caenorhabditis briggsae
RepID=A8WWE2_CAEBR
Length = 174
Score = 159 bits (403), Expect = 1e-37
Identities = 70/132 (53%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFH+ L+ + LHP+YFG NL + + +KL +VEGTC+G++GFV+AVT I+ IG GLI+
Sbjct: 1 MFFHLSLDHEVCLHPKYFGPNLNETIKAKLFNEVEGTCTGKYGFVIAVTTIDTIGHGLIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PV+Y+ +VFRPFKG++++ VVT VNK+G F + GP+ F+S H IP DMEF
Sbjct: 61 PGRGFVIYPVRYKAIVFRPFKGQVVDGVVTQVNKVGIFCDIGPLSCFISRHCIPPDMEFD 120
Query: 532 -SGDMPNYTTSD 564
+ + P Y T+D
Sbjct: 121 PNSEKPCYKTND 132
[39][TOP]
>UniRef100_C4WX48 ACYPI003367 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WX48_ACYPI
Length = 172
Score = 159 bits (401), Expect = 2e-37
Identities = 72/125 (57%), Positives = 95/125 (76%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE ++ LHPRYFG L D + KL ++VEGTC+G++GFV+AVT I+NIG GLI
Sbjct: 1 MFYHIALEHDVLLHPRYFGPQLLDTVKQKLYREVEGTCTGKYGFVIAVTHIDNIGCGLIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV + VKY+ +VFRPFKGE+LEAVVT +NK+G FAE GP+ F+S+H IP +++F
Sbjct: 61 PGQGFVVYTVKYKAIVFRPFKGEVLEAVVTQLNKVGMFAEIGPLSCFISHHSIPSELQFC 120
Query: 532 SGDMP 546
P
Sbjct: 121 PNTSP 125
[40][TOP]
>UniRef100_A4S3R6 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3R6_OSTLU
Length = 179
Score = 156 bits (394), Expect = 1e-36
Identities = 74/135 (54%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFH+ LERN+ L PR+FG ++ L KL +VEGTCSGR+GF+V VT + + +G++
Sbjct: 1 MFFHVNLERNITLEPRHFGARMKAVLEEKLRHEVEGTCSGRYGFIVMVTRLAEVSEGVVT 60
Query: 352 D-GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
D GT F +KY CVVFRPFKGE+++AVVT VNK GFFAEAGP+Q+FVSN LI +DM+F
Sbjct: 61 DDGTARAKFHIKYDCVVFRPFKGEVMDAVVTQVNKFGFFAEAGPLQLFVSNALITEDMQF 120
Query: 529 QSGDMPNYTTSDGSV 573
S Y + D +
Sbjct: 121 DSSGENCYVSDDQQI 135
[41][TOP]
>UniRef100_Q7PYV3 AGAP002121-PA n=1 Tax=Anopheles gambiae RepID=Q7PYV3_ANOGA
Length = 173
Score = 155 bits (393), Expect = 2e-36
Identities = 73/133 (54%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I++IG G I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPQLIETVKQKLYTEVEGTCTGKYGFVIAVTTIDDIGSGTIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF- 528
G GFV +PVKY+ +VFRPFKGE+L+A V VNK+G FAE GP+ F+S+H IP DM+F
Sbjct: 61 PGQGFVVYPVKYKAIVFRPFKGEVLDATVKQVNKVGMFAEIGPLSCFISHHSIPADMQFC 120
Query: 529 QSGDMPNYTTSDG 567
+G P Y +G
Sbjct: 121 PNGAPPCYRAING 133
[42][TOP]
>UniRef100_UPI0000D560AA PREDICTED: similar to GA16051-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D560AA
Length = 173
Score = 155 bits (392), Expect = 2e-36
Identities = 74/135 (54%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHP+YFG L + + +KL +VEGTC+G++GFV+AVT I++IG GLI
Sbjct: 1 MFYHISLEHEILLHPQYFGPQLLEKVKTKLYTEVEGTCTGKYGFVIAVTTIDSIGAGLIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G G+V +PVKY+ +VFRPFKGE+L+AVV VNK+G FAE GP+ F+S+H IP +MEF
Sbjct: 61 PGQGYVVYPVKYKAIVFRPFKGEVLDAVVRQVNKVGMFAEIGPLSCFISHHSIPAEMEFC 120
Query: 532 SGDMPN-YTTSDGSV 573
P Y T D V
Sbjct: 121 PNVNPQCYKTKDEDV 135
[43][TOP]
>UniRef100_A8ISK2 DNA-directed RNA polymerase II, 19 kDa polypeptide n=1
Tax=Chlamydomonas reinhardtii RepID=A8ISK2_CHLRE
Length = 176
Score = 155 bits (392), Expect = 2e-36
Identities = 68/132 (51%), Positives = 103/132 (78%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+ + L +++ +HP++FG LR+ + KL+ + EGTC+G++G+VVAVT +++IG+G IR
Sbjct: 1 MFYFLTLSKSLDIHPKHFGSKLREVIREKLIAETEGTCTGKYGYVVAVTKVDDIGRGRIR 60
Query: 352 -DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
D +G+ TF V Y C+V RP+KGE+L+AVVT VNKMGFFA+AGP+Q+FV+ HLIPD+ EF
Sbjct: 61 QDQSGYATFEVSYGCIVCRPYKGEVLDAVVTSVNKMGFFAQAGPLQLFVTQHLIPDEFEF 120
Query: 529 QSGDMPNYTTSD 564
+ D ++ + D
Sbjct: 121 DTSDDNSWISMD 132
[44][TOP]
>UniRef100_UPI0000E22AEB PREDICTED: similar to RNA polymerase II subunit hsRPB7 n=1 Tax=Pan
troglodytes RepID=UPI0000E22AEB
Length = 227
Score = 154 bits (390), Expect = 4e-36
Identities = 72/131 (54%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
I LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 60 ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 119
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 540
FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF + +
Sbjct: 120 FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 179
Query: 541 MPNYTTSDGSV 573
P Y T D +
Sbjct: 180 PPCYKTMDEDI 190
[45][TOP]
>UniRef100_UPI00006DFCE0 PREDICTED: similar to polymerase (RNA) II (DNA directed)
polypeptide G isoform 1 n=1 Tax=Macaca mulatta
RepID=UPI00006DFCE0
Length = 221
Score = 154 bits (390), Expect = 4e-36
Identities = 72/131 (54%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
I LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 54 ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 113
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 540
FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF + +
Sbjct: 114 FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 173
Query: 541 MPNYTTSDGSV 573
P Y T D +
Sbjct: 174 PPCYKTMDEDI 184
[46][TOP]
>UniRef100_UPI000051A7BC PREDICTED: similar to Rpb7 CG31155-PA, partial n=1 Tax=Apis
mellifera RepID=UPI000051A7BC
Length = 169
Score = 154 bits (390), Expect = 4e-36
Identities = 74/131 (56%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
I LE + LHPRYFG L D + KL +VEGTC+G++GFVVAVT I+NIG G+I+ G G
Sbjct: 1 ISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQPGQG 60
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF-QSGD 540
FV +PVKY+ +VFRPFKGE+L+A+VT VNK+G FAE GP+ F+S+H IP DM+F + +
Sbjct: 61 FVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPADMQFCPNIN 120
Query: 541 MPNYTTSDGSV 573
P Y T + V
Sbjct: 121 PPCYKTKEEDV 131
[47][TOP]
>UniRef100_UPI00006A0899 UPI00006A0899 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A0899
Length = 168
Score = 154 bits (390), Expect = 4e-36
Identities = 73/131 (55%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
I LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 1 ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 60
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 540
FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF + +
Sbjct: 61 FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 120
Query: 541 MPNYTTSDGSV 573
P Y T D V
Sbjct: 121 PPCYKTVDEDV 131
[48][TOP]
>UniRef100_UPI0000EB18F9 DNA-directed RNA polymerase II subunit RPB7 (RNA polymerase II
subunit B7) (DNA-directed RNA polymerase II subunit G)
(DNA-directed RNA polymerase II 19 kDa polypeptide). n=1
Tax=Canis lupus familiaris RepID=UPI0000EB18F9
Length = 213
Score = 154 bits (390), Expect = 4e-36
Identities = 72/131 (54%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
I LE + LHPRYFG NL + + KL +VEGTC+G++GFV+AVT I+NIG G+I+ G G
Sbjct: 46 ISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRG 105
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGD 540
FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF + +
Sbjct: 106 FVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSN 165
Query: 541 MPNYTTSDGSV 573
P Y T D +
Sbjct: 166 PPCYKTMDEDI 176
[49][TOP]
>UniRef100_Q5DBG3 Putative uncharacterized protein n=1 Tax=Schistosoma japonicum
RepID=Q5DBG3_SCHJA
Length = 157
Score = 153 bits (386), Expect = 1e-35
Identities = 67/132 (50%), Positives = 100/132 (75%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHP+YFG NL + + +KL DVEGTCSG++GF++AVT IE+IG G+I+
Sbjct: 1 MFYHIKLEHEILLHPKYFGPNLTETVKTKLFSDVEGTCSGKYGFIIAVTNIEHIGAGIIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
GFV + + Y+ +V+RPFKGE+++A+VT V K+G FAEAGP+ IF+S + +P +++F+
Sbjct: 61 PNRGFVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGVFAEAGPLTIFISKYSVPSNIKFE 120
Query: 532 SGDMPNYTTSDG 567
+ TT+DG
Sbjct: 121 GAE----TTTDG 128
[50][TOP]
>UniRef100_Q5DB36 SJCHGC02592 protein n=1 Tax=Schistosoma japonicum
RepID=Q5DB36_SCHJA
Length = 175
Score = 153 bits (386), Expect = 1e-35
Identities = 67/132 (50%), Positives = 100/132 (75%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI LE + LHP+YFG NL + + +KL DVEGTCSG++GF++AVT IE+IG G+I+
Sbjct: 1 MFYHIKLEHEILLHPKYFGPNLTETVKTKLFSDVEGTCSGKYGFIIAVTNIEHIGAGIIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
GFV + + Y+ +V+RPFKGE+++A+VT V K+G FAEAGP+ IF+S + +P +++F+
Sbjct: 61 PNRGFVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGVFAEAGPLTIFISKYSVPSNIKFE 120
Query: 532 SGDMPNYTTSDG 567
+ TT+DG
Sbjct: 121 GAE----TTTDG 128
[51][TOP]
>UniRef100_A8QBL6 Polymerase, putative n=1 Tax=Brugia malayi RepID=A8QBL6_BRUMA
Length = 171
Score = 153 bits (386), Expect = 1e-35
Identities = 73/135 (54%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF+HI L+ + LHP+YFG +L + + KL +VEGTC+G++GFVVAVT I+NIG GLI+
Sbjct: 1 MFYHIPLDHEICLHPKYFGPDLLETVKRKLFNEVEGTCTGKYGFVVAVTTIDNIGAGLIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G GFV +PVKY+ +VFRPFKG++++AV VN++G F + GP+ FVS H IP DMEF+
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGQVVDAV---VNQVGLFCDIGPLSCFVSRHCIPPDMEFE 117
Query: 532 -SGDMPNYTTSDGSV 573
+ + P Y T+D SV
Sbjct: 118 PNSNPPCYKTADESV 132
[52][TOP]
>UniRef100_UPI000186CD1A mixed-lineage leukemia protein, mll, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186CD1A
Length = 3311
Score = 152 bits (384), Expect = 2e-35
Identities = 74/131 (56%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
I LE + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I+NIG GLI G G
Sbjct: 3 ISLEHEILLHPRYFGPQLLETVKQKLYAEVEGTCTGKYGFVIAVTLIDNIGAGLILPGQG 62
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF-QSGD 540
FV +PVKY+ +VFRPFKGE+L+AVVT VNK+G FAE GP+ F+S+H IP DM+F + +
Sbjct: 63 FVVYPVKYRAIVFRPFKGEVLDAVVTQVNKVGMFAEIGPLSCFISHHSIPADMQFCPNFN 122
Query: 541 MPNYTTSDGSV 573
P Y + D V
Sbjct: 123 PPCYKSKDEDV 133
[53][TOP]
>UniRef100_B3S0W7 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S0W7_TRIAD
Length = 172
Score = 151 bits (381), Expect = 4e-35
Identities = 68/132 (51%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFH+ LE + LHPRYFG NL D + KL +VEGTCSG+HGFV+AVT I+ +G G I
Sbjct: 1 MFFHVTLEHEITLHPRYFGPNLLDTVRRKLFSEVEGTCSGKHGFVIAVTIIDKVGVGKIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
+GFV +PV+Y+ +VF+PF GE+++ +VT +NK+G F E GP+ F+S + IP DM F
Sbjct: 61 PNSGFVVYPVRYKAIVFKPFPGEVVDGIVTQLNKVGLFVEVGPLTCFISKYSIPRDMFFD 120
Query: 532 -SGDMPNYTTSD 564
+G+ P + T D
Sbjct: 121 PNGNPPCFRTED 132
[54][TOP]
>UniRef100_Q00ZY7 DNA-directed RNA polymerase subunit E' (ISS) n=1 Tax=Ostreococcus
tauri RepID=Q00ZY7_OSTTA
Length = 1353
Score = 148 bits (374), Expect = 3e-34
Identities = 76/151 (50%), Positives = 99/151 (65%), Gaps = 17/151 (11%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVE----------------GTCSGRHGF 303
MFFH+ LERN+ L PR+FG +R L KL +VE GTCSGR+GF
Sbjct: 1160 MFFHVNLERNITLEPRHFGARMRAVLEEKLRHEVESSRLTPTDAFTNTQVEGTCSGRYGF 1219
Query: 304 VVAVTGIENIGKGLI-RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGP 480
+V VT ++++ +G++ DGT F VKY CVVFRPFKGE+++AVVT VNK GFFAEAGP
Sbjct: 1220 IVMVTRVDDVSEGVVVDDGTARAKFHVKYDCVVFRPFKGEVVDAVVTQVNKFGFFAEAGP 1279
Query: 481 VQIFVSNHLIPDDMEFQSGDMPNYTTSDGSV 573
+Q+FVSN LI +DM+F S Y + D +
Sbjct: 1280 LQLFVSNALITEDMQFDSSGENCYVSDDQQI 1310
[55][TOP]
>UniRef100_Q54P04 DNA-directed RNA polymerase II subunit rpb7 n=1 Tax=Dictyostelium
discoideum RepID=RPB7_DICDI
Length = 172
Score = 146 bits (369), Expect = 1e-33
Identities = 63/134 (47%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFH+ LE+++ +HP++ G NL +L +VEGTC+GR+GF++ +T ++ + KG +
Sbjct: 1 MFFHLTLEKDLHMHPKHCGPNLFTIATQQLYSEVEGTCTGRYGFIITITSVDFLSKGKVL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
+ +G+V F VKY+ ++F+PFKGE+L+A+VT V +GFFAEAGP+ IFVS LIP DM F
Sbjct: 61 ESSGYVVFNVKYKAIIFKPFKGEVLDAIVTKVTNLGFFAEAGPLSIFVSTQLIPSDMIFD 120
Query: 532 S-GDMPNYTTSDGS 570
+ +P + + DGS
Sbjct: 121 AQSAVPCFVSEDGS 134
[56][TOP]
>UniRef100_C4Q0F7 DNA-directed rna polymerase II 19 kD polypeptide rpb7, putative n=1
Tax=Schistosoma mansoni RepID=C4Q0F7_SCHMA
Length = 194
Score = 144 bits (364), Expect = 4e-33
Identities = 64/128 (50%), Positives = 96/128 (75%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTG 363
I LE + LHP+YFG NL + + +KL DVEGTCSG++GF++AVT IE+IG G+I+ G
Sbjct: 28 IKLEHEILLHPKYFGPNLTETVKTKLFSDVEGTCSGKYGFIIAVTNIEHIGAGIIQPNRG 87
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDM 543
FV + + Y+ +V+RPFKGE+++A+VT V K+G FAEAGP+ IF+S + +P +++F+ +
Sbjct: 88 FVQYRIVYRAIVYRPFKGEVVDAIVTQVTKVGVFAEAGPLTIFISKYSVPSNIKFEGAE- 146
Query: 544 PNYTTSDG 567
TT+DG
Sbjct: 147 ---TTTDG 151
[57][TOP]
>UniRef100_C1MQF2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MQF2_9CHLO
Length = 174
Score = 143 bits (361), Expect = 8e-33
Identities = 66/128 (51%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFFHI E+N+ L P YFG+ +R+ + S++ ++VEG+C+GRHG++V VT I +I +G+I
Sbjct: 1 MFFHIEQEKNIVLEPMYFGKRMREMIESRVRQEVEGSCTGRHGYIVMVTNIVHISEGMIT 60
Query: 352 D-GTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
D GT F VKY + FRPFK E+L+ VV V K GFFAEAGP+++FVSN L+P++M F
Sbjct: 61 DDGTARAKFHVKYSAIAFRPFKNEVLDCVVVQVTKFGFFAEAGPLKLFVSNQLVPEEMVF 120
Query: 529 QSGDMPNY 552
+S D Y
Sbjct: 121 ESVDENAY 128
[58][TOP]
>UniRef100_A5DHT0 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DHT0_PICGU
Length = 173
Score = 142 bits (358), Expect = 2e-32
Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP YFG + L SKL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLNLTLHPSYFGPQMDSYLRSKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGK 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G+G F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 IIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 FQ-SGDMPNYTTSDGSV 573
F S + P Y + D ++
Sbjct: 121 FNPSANPPAYVSPDENI 137
[59][TOP]
>UniRef100_UPI000151B414 hypothetical protein PGUG_02831 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B414
Length = 173
Score = 140 bits (354), Expect = 5e-32
Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP YFG + L SKL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLNLTLHPSYFGPQMDLYLRSKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGK 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G+G F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 IIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 FQ-SGDMPNYTTSDGSV 573
F S + P Y + D ++
Sbjct: 121 FNPSANPPAYVSPDENI 137
[60][TOP]
>UniRef100_A3GFG7 RNA polymerase II subunit n=1 Tax=Pichia stipitis
RepID=A3GFG7_PICST
Length = 173
Score = 140 bits (354), Expect = 5e-32
Identities = 71/137 (51%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP YFG + L KL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLNLTLHPSYFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G+G F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 IIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 FQ-SGDMPNYTTSDGSV 573
F S + P Y + D ++
Sbjct: 121 FNPSANPPAYVSPDENI 137
[61][TOP]
>UniRef100_Q6BIU6 DEHA2G07546p n=1 Tax=Debaryomyces hansenii RepID=Q6BIU6_DEBHA
Length = 173
Score = 140 bits (352), Expect = 9e-32
Identities = 70/137 (51%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP YFG + L KL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLNLTLHPSYFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDCMNIDVGKGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
+ G+G F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 VIPGSGVAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 FQ-SGDMPNYTTSDGSV 573
F S + P Y + D ++
Sbjct: 121 FNPSANPPAYVSPDENI 137
[62][TOP]
>UniRef100_B6JXX4 DNA-directed RNA polymerase II subunit RPB7 n=1
Tax=Schizosaccharomyces japonicus yFS275
RepID=B6JXX4_SCHJY
Length = 172
Score = 140 bits (352), Expect = 9e-32
Identities = 66/133 (49%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
Frame = +1
Query: 175 FFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAV--TGIENIGKGLI 348
FF L + LHP YFG ++RD L +KL+ DVEGTCSG++G+++ V + +I KG +
Sbjct: 3 FFLKELSLTISLHPSYFGPHMRDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGKV 62
Query: 349 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
G GF F VKY+ +++RPF+GE+++AVVT VNKMGFFA+ GP+ +FVS+HL+P DM F
Sbjct: 63 IPGQGFAEFEVKYRAILWRPFRGEVVDAVVTTVNKMGFFADVGPLSVFVSSHLVPPDMTF 122
Query: 529 Q-SGDMPNYTTSD 564
+ + PNY+ D
Sbjct: 123 DPAANPPNYSGED 135
[63][TOP]
>UniRef100_C4YFA6 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Candida
albicans RepID=C4YFA6_CANAL
Length = 173
Score = 138 bits (348), Expect = 3e-31
Identities = 71/137 (51%), Positives = 93/137 (67%), Gaps = 3/137 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP +FG + L KL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLNLTLHPSFFGPQMDQYLREKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I TG V F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 IIPSTGKVEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 FQ-SGDMPNYTTSDGSV 573
F S + P Y + D ++
Sbjct: 121 FNPSANPPAYVSPDENI 137
[64][TOP]
>UniRef100_Q5A8Y7 Likely RNA Pol II core complex subunit n=2 Tax=Candida
RepID=Q5A8Y7_CANAL
Length = 173
Score = 138 bits (347), Expect = 3e-31
Identities = 70/137 (51%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP +FG + L KL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLNLTLHPSFFGPQMDQYLREKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I TG F VKY+ VV++PFKGE+++AVVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 IIPSTGMAEFEVKYRAVVWKPFKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 FQ-SGDMPNYTTSDGSV 573
F S + P Y + D ++
Sbjct: 121 FNPSANPPAYVSPDENI 137
[65][TOP]
>UniRef100_O14459 DNA-directed RNA polymerase II subunit rpb7 n=1
Tax=Schizosaccharomyces pombe RepID=RPB7_SCHPO
Length = 172
Score = 137 bits (346), Expect = 4e-31
Identities = 65/133 (48%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Frame = +1
Query: 175 FFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAV--TGIENIGKGLI 348
FF L + LHP YFG ++D L +KL+ DVEGTCSG++G+++ V + +I KG +
Sbjct: 3 FFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGRV 62
Query: 349 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
G GF F VKY+ V++RPF+GE+++A+VT VNKMGFFA GP+ +FVS+HL+P DM+F
Sbjct: 63 VPGQGFAEFEVKYRAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKF 122
Query: 529 Q-SGDMPNYTTSD 564
+ + PNY+ D
Sbjct: 123 DPTANPPNYSGED 135
[66][TOP]
>UniRef100_C5MEG1 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Candida
tropicalis MYA-3404 RepID=C5MEG1_CANTT
Length = 173
Score = 137 bits (344), Expect = 8e-31
Identities = 68/134 (50%), Positives = 93/134 (69%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP +FG + L KL+ DVEGTC+G+ G++V V +I GKG
Sbjct: 1 MFFLKDLSLNLTLHPSFFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDSSHIDVGKGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I GTG F VKY+ VV++PFKGE+++AVV VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 IIPGTGMAEFEVKYRAVVWKPFKGEVVDAVVHTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 F-QSGDMPNYTTSD 564
+ S + P+Y+++D
Sbjct: 121 YNSSANPPSYSSND 134
[67][TOP]
>UniRef100_A5DVP2 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
Tax=Lodderomyces elongisporus RepID=A5DVP2_LODEL
Length = 173
Score = 137 bits (344), Expect = 8e-31
Identities = 69/137 (50%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L N+ LHP YFG + L KL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLNLTLHPSYFGPQMDQYLRDKLLSDVEGTCTGQFGYIVCVLDSMNIDVGKGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I +G F VKY+ VV++PFKGE+++ VVT VNKMGFFA+ GP+ +FVS HLIP DM+
Sbjct: 61 IIPSSGMAEFEVKYRAVVWKPFKGEVVDGVVTTVNKMGFFADVGPLSVFVSTHLIPSDMK 120
Query: 526 FQ-SGDMPNYTTSDGSV 573
F S + P Y++ D ++
Sbjct: 121 FNPSANPPAYSSPDENI 137
[68][TOP]
>UniRef100_A7ER17 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7ER17_SCLS1
Length = 167
Score = 135 bits (340), Expect = 2e-30
Identities = 66/135 (48%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP YFGRN+ + + KL+KDVEGTC+G + +++ + NI +G I
Sbjct: 1 MFFLYNLERQVTLHPSYFGRNMHELVTGKLLKDVEGTCTGLY-YIITIMDTFNISEGRIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F V Y+ VV+RPFKGE ++A+VT VN +GFFA+AGP+ +FVS HLIP D++F
Sbjct: 60 PGSGLAEFTVGYRAVVWRPFKGETVDAIVTSVNAVGFFADAGPLPLFVSAHLIPRDIKFD 119
Query: 532 -SGDMPNYTTSDGSV 573
+ P +T ++ SV
Sbjct: 120 ANATPPQFTNNEDSV 134
[69][TOP]
>UniRef100_A6SL82 Putative uncharacterized protein n=1 Tax=Botryotinia fuckeliana
B05.10 RepID=A6SL82_BOTFB
Length = 172
Score = 135 bits (340), Expect = 2e-30
Identities = 66/135 (48%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP YFGRN+ + + KL+KDVEGTC+G + +++ + NI +G I
Sbjct: 1 MFFLYNLERQVTLHPSYFGRNMHELVTGKLLKDVEGTCTGLY-YIITIMDTFNISEGRIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F V Y+ VV+RPFKGE ++A+VT VN +GFFA+AGP+ +FVS HLIP D++F
Sbjct: 60 PGSGLAEFTVGYRAVVWRPFKGETVDAIVTSVNAVGFFADAGPLPLFVSAHLIPRDIKFD 119
Query: 532 -SGDMPNYTTSDGSV 573
+ P +T ++ SV
Sbjct: 120 ANATPPQFTNNEDSV 134
[70][TOP]
>UniRef100_Q4P3H9 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P3H9_USTMA
Length = 170
Score = 134 bits (337), Expect = 5e-30
Identities = 62/125 (49%), Positives = 86/125 (68%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF L +LHP YFG ++ + L KL DVEGTC+G+HG+++ V G+ ++G+G +
Sbjct: 1 MFFLKHLTHKTELHPSYFGPSMVEFLNQKLRDDVEGTCTGKHGYIIKVIGLVDVGQGKVI 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F YQ VV +PFKGE+++A +T VNKMGFFAE GP+ IFVS+HLIP + +FQ
Sbjct: 61 PGSGLAEFNSTYQAVVLKPFKGEVMDAKITNVNKMGFFAEVGPLNIFVSSHLIPIEYKFQ 120
Query: 532 SGDMP 546
P
Sbjct: 121 PESNP 125
[71][TOP]
>UniRef100_B0DKE6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DKE6_LACBS
Length = 170
Score = 134 bits (336), Expect = 6e-30
Identities = 64/134 (47%), Positives = 87/134 (64%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF L + LHP YFG + + L SKL DVEGTCSG+ G+++AV I +IGKG++
Sbjct: 1 MFFIKELTHTILLHPSYFGPRMLNFLESKLYSDVEGTCSGQFGYIIAVVSILDIGKGMVL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F +Y+ +VF+PFKGE+++ VV VNKMGFFA+ GP+ +FVS+ LI DM F
Sbjct: 61 SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVNKMGFFADVGPLTVFVSHQLIHPDMRFD 120
Query: 532 SGDMPNYTTSDGSV 573
P SD +
Sbjct: 121 PNSNPPSFASDEQI 134
[72][TOP]
>UniRef100_B7PE24 DNA-directed RNA polymerase subunit E', putative (Fragment) n=1
Tax=Ixodes scapularis RepID=B7PE24_IXOSC
Length = 173
Score = 132 bits (333), Expect = 1e-29
Identities = 66/133 (49%), Positives = 87/133 (65%), Gaps = 1/133 (0%)
Frame = +1
Query: 178 FHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDG 357
F I L+ + LHPRYFG L + + KL +VEGTC+G++GFVVAV I+NIG GLI+ G
Sbjct: 1 FQISLDHEILLHPRYFGPQLEETVKQKLYAEVEGTCTGKYGFVVAVMTIDNIGAGLIQPG 60
Query: 358 TGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-S 534
GFV +PV+Y +VFRPFKGE+L+AVVT VNK+ + +S IP DM+F +
Sbjct: 61 RGFVVYPVRYTAIVFRPFKGEVLDAVVTQVNKVSGVGAPDTDSVCISFQSIPSDMQFDPN 120
Query: 535 GDMPNYTTSDGSV 573
+ P Y T D V
Sbjct: 121 SNPPCYRTQDEDV 133
[73][TOP]
>UniRef100_A8N5F1 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8N5F1_COPC7
Length = 170
Score = 132 bits (332), Expect = 2e-29
Identities = 62/132 (46%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF L + LHP YFG + L +KL DVEGTCSG+ G+++AV I +IGKG++
Sbjct: 1 MFFIKELTHTILLHPSYFGPQMLSYLETKLYNDVEGTCSGQFGYIIAVVSILDIGKGMVL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F +Y+ +VF+PFKGE+++ VV VNKMGFFA+ GP+ +FVS+ LI DM+F
Sbjct: 61 SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVNKMGFFADVGPLSVFVSHQLIHPDMKFD 120
Query: 532 -SGDMPNYTTSD 564
+ + P++ + D
Sbjct: 121 PNSNPPSFASED 132
[74][TOP]
>UniRef100_Q2HAA7 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2HAA7_CHAGB
Length = 202
Score = 132 bits (331), Expect = 2e-29
Identities = 59/134 (44%), Positives = 95/134 (70%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP YFGRN+ + + +KL+KDVEGTC+G + +++A+ ++ +G I
Sbjct: 1 MFFLHNLERRVTLHPSYFGRNMHELVTTKLVKDVEGTCAGDY-YIIAIMDTFDVSEGRIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F V Y+ VV+RPFKGE+++A+ VN GFFA+AGP+++FVS+HL+PD++++
Sbjct: 60 PGSGLAEFTVGYRAVVWRPFKGEVIDAITQTVNPHGFFAQAGPLRLFVSSHLMPDEIQYD 119
Query: 532 SGDMPNYTTSDGSV 573
+ P T++ +
Sbjct: 120 ASATPAQFTNNADI 133
[75][TOP]
>UniRef100_B8P5T6 Predicted protein n=1 Tax=Postia placenta Mad-698-R
RepID=B8P5T6_POSPM
Length = 170
Score = 131 bits (330), Expect = 3e-29
Identities = 62/132 (46%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF L + LHP YFG + L SKL DVEGTCSG+ G+++AV I +IGKG++
Sbjct: 1 MFFIKELSHTILLHPSYFGPRMLQFLESKLYSDVEGTCSGQFGYIIAVVSILDIGKGMVI 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F +Y+ +VF+PFKGE+++ VV VNKMGFFA+ GP+ +FVS+ LI D++F
Sbjct: 61 SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVNKMGFFADVGPLTVFVSHQLIHPDLKFD 120
Query: 532 -SGDMPNYTTSD 564
+ + P++ + D
Sbjct: 121 PNSNPPSFASED 132
[76][TOP]
>UniRef100_Q5KHZ6 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q5KHZ6_CRYNE
Length = 172
Score = 131 bits (329), Expect = 4e-29
Identities = 66/132 (50%), Positives = 86/132 (65%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF L + LHP YFG L D L KL +DVEGTCSG+HG++++V I +IG+G I
Sbjct: 1 MFFLRELTHTILLHPSYFGAQLEDYLRQKLYEDVEGTCSGKHGYIISVITITDIGEGKII 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
TG F +Y +V +PFKGE+++A V VNKMGFFA GP+Q+FVS HL DM+F
Sbjct: 61 PSTGQAKFKTRYTAIVMKPFKGEVVDAKVVNVNKMGFFAMVGPLQVFVSCHLTHSDMKFD 120
Query: 532 -SGDMPNYTTSD 564
S P Y ++D
Sbjct: 121 PSVSPPCYRSND 132
[77][TOP]
>UniRef100_Q6MV30 Probable DNA-directed RNA polymerase II chain Rpb7 n=1
Tax=Neurospora crassa RepID=Q6MV30_NEUCR
Length = 167
Score = 130 bits (328), Expect = 5e-29
Identities = 60/134 (44%), Positives = 92/134 (68%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP YFGRN+ + + +KL+KDVEGTC+G + +++A+ ++ +G I
Sbjct: 1 MFFLHNLERRVTLHPSYFGRNMHELVTTKLVKDVEGTCAGDY-YIIAIMDAFDVSEGRIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G G F VKY+ VV+RPFKGE+++A+V +N GFF +AGP+ IFVS+HL+P+++ F
Sbjct: 60 PGNGLAEFTVKYRAVVWRPFKGEVVDAIVFSINPHGFFCQAGPLSIFVSSHLMPEEIHFD 119
Query: 532 SGDMPNYTTSDGSV 573
P T++ +
Sbjct: 120 PNATPPQFTNNADM 133
[78][TOP]
>UniRef100_B2ATR6 Predicted CDS Pa_1_16720 n=1 Tax=Podospora anserina
RepID=B2ATR6_PODAN
Length = 249
Score = 127 bits (318), Expect = 8e-28
Identities = 59/134 (44%), Positives = 91/134 (67%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP YFG+N+ + + +KL+KDVEGTC+G + +++A+ ++ +G I
Sbjct: 1 MFFLHNLERRVLLHPSYFGKNMTELVTTKLVKDVEGTCTGDY-YIIAIMDTFDLSEGRIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F V Y+ VV+RPFKGE+++A+ T VN+ GFF+ AGP+ IFVS H IP D+++
Sbjct: 60 PGSGMAEFTVGYRAVVWRPFKGEVVDAICTSVNQHGFFSNAGPLSIFVSTHSIPPDIQYD 119
Query: 532 SGDMPNYTTSDGSV 573
+ P T+ +
Sbjct: 120 ANATPPQFTNHSDI 133
[79][TOP]
>UniRef100_C9SIH0 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SIH0_9PEZI
Length = 177
Score = 126 bits (317), Expect = 1e-27
Identities = 63/135 (46%), Positives = 94/135 (69%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF +ER + LHP YFGRN+ D + SKL+KDVEGT +G + +V+++ +I +G I
Sbjct: 1 MFFLKNMERRVTLHPSYFGRNMHDLVTSKLLKDVEGTFAGSY-YVISIMDTFDISEGKIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G F V Y+ VV+RPFKGE ++AVV VN GFFA+AGP+++FVS HLIP ++++
Sbjct: 60 PGSGLAEFNVGYRAVVWRPFKGETVDAVVYSVNHQGFFAQAGPLRLFVSAHLIPSEIKWD 119
Query: 532 -SGDMPNYTTSDGSV 573
+ P +T +D ++
Sbjct: 120 PNATPPQFTDNDDTI 134
[80][TOP]
>UniRef100_B5FVE7 YALI0D11627p n=1 Tax=Yarrowia lipolytica RepID=B5FVE7_YARLI
Length = 190
Score = 123 bits (308), Expect = 1e-26
Identities = 60/127 (47%), Positives = 84/127 (66%), Gaps = 2/127 (1%)
Frame = +1
Query: 190 LERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIE-NIGKGLIRDGTGF 366
L ++ LHP YFG + L SKL+ DVEGTC+G G+++ V +IGKG + G
Sbjct: 27 LTLSLTLHPSYFGPQMGQYLRSKLLADVEGTCTGEFGYILCVLDQPFDIGKGRVVPSNGS 86
Query: 367 VTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGDM 543
F V Y+ +V+RPFK E+++A+VT VNKMGFF + GP+ +FVS+HLIP DM+F S +
Sbjct: 87 AEFTVNYRAIVWRPFKNEVVDAIVTNVNKMGFFGDVGPLSVFVSSHLIPPDMKFNPSANP 146
Query: 544 PNYTTSD 564
P Y + D
Sbjct: 147 PAYVSED 153
[81][TOP]
>UniRef100_Q55UE9 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q55UE9_CRYNE
Length = 169
Score = 120 bits (302), Expect = 6e-26
Identities = 63/132 (47%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF L + LHP YFG L D L KL +DVEGTCSG+HG++++V I +IG+G I
Sbjct: 1 MFFLRELTHTILLHPSYFGAQLEDYLRQKLYEDVEGTCSGKHGYIISVITITDIGEGKII 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
TG F +Y +V +PFKGE+++A V MGFFA GP+Q+FVS HL DM+F
Sbjct: 61 PSTGQAKFKTRYTAIVMKPFKGEVVDAKVV---NMGFFAMVGPLQVFVSCHLTHSDMKFD 117
Query: 532 -SGDMPNYTTSD 564
S P Y ++D
Sbjct: 118 PSVSPPCYRSND 129
[82][TOP]
>UniRef100_C4R9A1 RNA polymerase II subunit n=1 Tax=Pichia pastoris GS115
RepID=C4R9A1_PICPG
Length = 171
Score = 120 bits (302), Expect = 6e-26
Identities = 62/134 (46%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI--GKGL 345
MFF L + LHP YFG + L KL+ DVEGTC+G+ G++V V NI GKG
Sbjct: 1 MFFLKDLSLILTLHPSYFGPQMNQYLREKLLTDVEGTCTGQFGYIVTVLDGMNIDVGKGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G+G F VKY+ VV++PFKGE+++A+V+ V+ +GFFA+ GP+ +FVS LIPD++
Sbjct: 61 IIPGSGSAEFEVKYRAVVWKPFKGEVVDAIVSNVSPIGFFADVGPLNVFVSTRLIPDNLV 120
Query: 526 FQ-SGDMPNYTTSD 564
+ S P Y ++D
Sbjct: 121 YNPSNSPPAYMSND 134
[83][TOP]
>UniRef100_A8Q628 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8Q628_MALGO
Length = 186
Score = 120 bits (301), Expect = 7e-26
Identities = 60/146 (41%), Positives = 86/146 (58%), Gaps = 16/146 (10%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRH----------------GF 303
MFF L+ +LHP +FG ++ + L KL DVEGTCSG + G+
Sbjct: 1 MFFLKTLDHRTELHPSFFGPSMIEFLNRKLRDDVEGTCSGVYVRTYKSMRLMLILESQGY 60
Query: 304 VVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV 483
++ V + ++G+G + GTG F +YQ +V +PF GE+++A +T VNKMGFFAE GP+
Sbjct: 61 IIKVVSVLDVGQGKVMPGTGLAEFRSRYQAIVLKPFNGEVVDAKITNVNKMGFFAEVGPL 120
Query: 484 QIFVSNHLIPDDMEFQSGDMPNYTTS 561
IFVS+HL+P D +F P TS
Sbjct: 121 SIFVSSHLLPIDYKFHPDSNPPEFTS 146
[84][TOP]
>UniRef100_UPI000023E344 hypothetical protein FG01220.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E344
Length = 248
Score = 119 bits (297), Expect = 2e-25
Identities = 61/141 (43%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP + GRN+ + + KL+KDVEGTC+G + F++++ I +G I
Sbjct: 1 MFFLYNLERKVTLHPSFMGRNMHELVTGKLLKDVEGTCAGSY-FIISIMDAFEISEGRIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEI------LEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 513
G G F V Y+ VV+RPFKGE ++AVV +N GFFA AGP+++FVS HLIP
Sbjct: 60 PGLGMAEFTVGYRAVVWRPFKGETESDLTQVDAVVHSINPQGFFAHAGPLRLFVSAHLIP 119
Query: 514 DDMEFQ-SGDMPNYTTSDGSV 573
+D+++ + P +T ++ +V
Sbjct: 120 NDVKWDPNATPPQFTNNEDTV 140
[85][TOP]
>UniRef100_Q753Q2 AFR402Cp n=1 Tax=Eremothecium gossypii RepID=Q753Q2_ASHGO
Length = 171
Score = 117 bits (294), Expect = 5e-25
Identities = 57/134 (42%), Positives = 89/134 (66%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 345
MFF L N+ LHP YFG +R+ L +KL+++VEGTC+G+ G+++ V ENI +G
Sbjct: 1 MFFFKDLSLNITLHPSYFGPRMREYLKTKLLQEVEGTCTGKFGYILCVLDSENIEIERGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G F VKY+ VV++PFKGE+++ +V+ +GF + GP+ +FVS L+P+D+
Sbjct: 61 ILPTDGSAEFTVKYRAVVWKPFKGEVVDGIVSSCTNLGFEVDVGPLSVFVSPFLMPEDLT 120
Query: 526 FQSG-DMPNYTTSD 564
F SG + P+Y +S+
Sbjct: 121 FNSGSNPPSYQSSE 134
[86][TOP]
>UniRef100_Q6CU89 KLLA0C06787p n=1 Tax=Kluyveromyces lactis RepID=Q6CU89_KLULA
Length = 171
Score = 117 bits (293), Expect = 6e-25
Identities = 57/134 (42%), Positives = 89/134 (66%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 345
MFF L N+ LHP +FG ++ L++KL+++VEGTC+G+ G+++ V ENI +G
Sbjct: 1 MFFFKDLSLNITLHPSFFGPQMKRYLMTKLLQEVEGTCTGKFGYILCVLDCENIEIERGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G F VKY+ VV++PFKGE+L+ +V+ +GF E GP+ +FVS L+P+D+
Sbjct: 61 ILPTDGSAEFTVKYRAVVWKPFKGEVLDGIVSSCTNLGFEVEVGPLSVFVSPFLMPEDLT 120
Query: 526 FQSG-DMPNYTTSD 564
F SG + P+Y +S+
Sbjct: 121 FNSGSNPPSYQSSE 134
[87][TOP]
>UniRef100_C5DLR8 KLTH0G02926p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DLR8_LACTC
Length = 171
Score = 117 bits (292), Expect = 8e-25
Identities = 56/134 (41%), Positives = 89/134 (66%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIEN--IGKGL 345
MFF L N+ LHP +FG ++ L +KL+++VEGTC+G+ G+++ V EN I +G
Sbjct: 1 MFFFKDLSLNITLHPSFFGPQMKQYLRTKLLQEVEGTCTGKFGYILCVLDCENVEIERGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G G F VKY+ VV++PFKGE+++ VV+ +GF + GP+ +FVS L+P+D+
Sbjct: 61 ILPGDGSAEFTVKYRAVVWKPFKGEVVDGVVSSCTNLGFEVDVGPLSVFVSPFLMPEDLS 120
Query: 526 FQSG-DMPNYTTSD 564
+ SG + P+Y +S+
Sbjct: 121 YNSGSNPPSYQSSE 134
[88][TOP]
>UniRef100_C5GU02 RNA polymerase II subunit 7 n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GU02_AJEDR
Length = 169
Score = 113 bits (282), Expect = 1e-23
Identities = 52/132 (39%), Positives = 83/132 (62%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G +
Sbjct: 1 MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++A+VT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 SGDMPNYTTSDG 567
P T +G
Sbjct: 120 PDATPPQYTDNG 131
[89][TOP]
>UniRef100_C1H1N2 DNA-directed RNA polymerase II subunit RPB7 n=1
Tax=Paracoccidioides brasiliensis Pb01
RepID=C1H1N2_PARBA
Length = 202
Score = 113 bits (282), Expect = 1e-23
Identities = 53/132 (40%), Positives = 83/132 (62%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G +
Sbjct: 1 MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVI 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++AVVT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGLAEYTIMYRAIVWKPFKGETVDAVVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 SGDMPNYTTSDG 567
P T +G
Sbjct: 120 PDATPPQYTDNG 131
[90][TOP]
>UniRef100_C1G5V3 RNA polymerase II subunit 7 n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1G5V3_PARBD
Length = 169
Score = 113 bits (282), Expect = 1e-23
Identities = 53/132 (40%), Positives = 83/132 (62%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G +
Sbjct: 1 MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVI 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++AVVT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGLAEYTIMYRAIVWKPFKGETVDAVVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 SGDMPNYTTSDG 567
P T +G
Sbjct: 120 PDATPPQYTDNG 131
[91][TOP]
>UniRef100_C0RXK4 RNA polymerase II subunit 7 n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0RXK4_PARBP
Length = 195
Score = 113 bits (282), Expect = 1e-23
Identities = 53/132 (40%), Positives = 83/132 (62%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G +
Sbjct: 1 MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVI 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++AVVT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGLAEYTIMYRAIVWKPFKGETVDAVVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 SGDMPNYTTSDG 567
P T +G
Sbjct: 120 PDATPPQYTDNG 131
[92][TOP]
>UniRef100_C0NG73 RNA polymerase II subunit 7 n=3 Tax=Ajellomyces capsulatus
RepID=C0NG73_AJECG
Length = 169
Score = 113 bits (282), Expect = 1e-23
Identities = 52/132 (39%), Positives = 83/132 (62%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G +
Sbjct: 1 MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++A+VT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 SGDMPNYTTSDG 567
P T +G
Sbjct: 120 PDATPPQYTDNG 131
[93][TOP]
>UniRef100_P34087 DNA-directed RNA polymerase II subunit RPB7 n=5 Tax=Saccharomyces
cerevisiae RepID=RPB7_YEAST
Length = 171
Score = 112 bits (280), Expect = 2e-23
Identities = 53/134 (39%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 345
MFF L N+ LHP +FG ++ L +KL+++VEG+C+G+ G+++ V +NI +G
Sbjct: 1 MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G F VKY+ VVF+PFKGE+++ V ++ GF + GP+++FV+ HL+P D+
Sbjct: 61 ILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLT 120
Query: 526 FQSG-DMPNYTTSD 564
F +G + P+Y +S+
Sbjct: 121 FNAGSNPPSYQSSE 134
[94][TOP]
>UniRef100_C5FWU0 DNA-directed RNA polymerase II subunit RPB7 n=1 Tax=Microsporum
canis CBS 113480 RepID=C5FWU0_NANOT
Length = 169
Score = 112 bits (279), Expect = 3e-23
Identities = 54/135 (40%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V + +I +G I
Sbjct: 1 MFFIHFLEHVLTLHPSFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDMYDISEGKII 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++A+VT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGLAEYTIVYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 -SGDMPNYTTSDGSV 573
P YT + V
Sbjct: 120 PDATPPQYTDNADQV 134
[95][TOP]
>UniRef100_C5DW41 ZYRO0D11726p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DW41_ZYGRC
Length = 171
Score = 112 bits (279), Expect = 3e-23
Identities = 52/134 (38%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 345
MFF L N+ LHP YFG ++D L +KL+++VEG+C+G+ G+++ V + I +G
Sbjct: 1 MFFIKDLSLNITLHPSYFGPRMKDFLKTKLLQEVEGSCTGKFGYILCVLDYDRIDIERGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G F V+Y+ +VF+PFKGE+++ V ++ GF + GP+++FV+ HL+P D+
Sbjct: 61 ILPTDGSAEFTVRYRAIVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLM 120
Query: 526 FQSG-DMPNYTTSD 564
F +G + P+Y +S+
Sbjct: 121 FNAGSNPPSYQSSE 134
[96][TOP]
>UniRef100_Q6FUK8 Strain CBS138 chromosome F complete sequence n=1 Tax=Candida
glabrata RepID=Q6FUK8_CANGA
Length = 171
Score = 111 bits (277), Expect = 5e-23
Identities = 52/134 (38%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 345
MFF L N+ LHP +FG ++ + +KL+++VEG+C+G+ G+++ V +NI +G
Sbjct: 1 MFFIKDLSLNVTLHPSFFGPRMKQYIKTKLLQEVEGSCTGKFGYILCVLDYDNIEIERGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G F VKY+ VVF+PFKGE+++ V ++ GF + GP+++FV+ HL+P D+
Sbjct: 61 ILPTDGSAEFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLT 120
Query: 526 FQSG-DMPNYTTSD 564
F +G + P+Y +S+
Sbjct: 121 FNAGSNPPSYQSSE 134
[97][TOP]
>UniRef100_Q1DZF6 Putative uncharacterized protein n=1 Tax=Coccidioides immitis
RepID=Q1DZF6_COCIM
Length = 180
Score = 111 bits (277), Expect = 5e-23
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G I
Sbjct: 1 MFFIHFLEHVLTLHPSFFGSHVKEYLTQKLLDDVEGICTGDY-YIVCVMDTYDISEGRII 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++A+VT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGMAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 -SGDMPNYTTSDGSV 573
P YT + V
Sbjct: 120 PDATPPQYTDNADQV 134
[98][TOP]
>UniRef100_C5P090 DNA-directed RNA polymerase II, putative n=1 Tax=Coccidioides
posadasii C735 delta SOWgp RepID=C5P090_COCP7
Length = 169
Score = 111 bits (277), Expect = 5e-23
Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G I
Sbjct: 1 MFFIHFLEHVLTLHPSFFGSHVKEYLTQKLLDDVEGICTGDY-YIVCVMDTYDISEGRII 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++A+VT V G FAE GP+ +FVS HLIP ++++
Sbjct: 60 PGSGMAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWD 119
Query: 532 -SGDMPNYTTSDGSV 573
P YT + V
Sbjct: 120 PDATPPQYTDNADQV 134
[99][TOP]
>UniRef100_C5JP31 RNA polymerase II subunit 7 n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JP31_AJEDS
Length = 169
Score = 110 bits (274), Expect = 1e-22
Identities = 51/132 (38%), Positives = 82/132 (62%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE + LHP +FG ++++ L KL+ DVEG C+G + ++V V +I +G +
Sbjct: 1 MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDY-YIVCVMDTYDISEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + + Y+ +V++PFKGE ++A+VT V G FAE G + +FVS HLIP ++++
Sbjct: 60 PGSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGQLTVFVSKHLIPPEIKWD 119
Query: 532 SGDMPNYTTSDG 567
P T +G
Sbjct: 120 PDATPPQYTDNG 131
[100][TOP]
>UniRef100_A7TTM8 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TTM8_VANPO
Length = 171
Score = 108 bits (271), Expect = 2e-22
Identities = 51/134 (38%), Positives = 87/134 (64%), Gaps = 3/134 (2%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG--KGL 345
MFF L N+ LHP +FG ++ L +KL+++VEG+C+G+ G+++ V + I +G
Sbjct: 1 MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLQEVEGSCTGKFGYILCVLDYDKIEIERGR 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
I G F VKY+ +VF+PFKGE+++ V ++ GF + GP+++FV+ HL+P D+
Sbjct: 61 ILPTDGSAEFTVKYRAIVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLI 120
Query: 526 FQSG-DMPNYTTSD 564
F +G + P+Y +S+
Sbjct: 121 FNAGSNPPSYQSSE 134
[101][TOP]
>UniRef100_C4Y643 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y643_CLAL4
Length = 141
Score = 107 bits (268), Expect = 5e-22
Identities = 52/104 (50%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Frame = +1
Query: 271 VEGTCSGRHGFVVAVTGIENI--GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTM 444
++GTC+G+ G++V V NI G+G I G+G F VKY+ VV++PFKGE+++AVVT
Sbjct: 2 LKGTCTGQFGYIVCVLDCMNIDVGRGRIIPGSGMAEFEVKYRAVVWKPFKGEVVDAVVTT 61
Query: 445 VNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGDMPNYTTSDGSV 573
VNKMGFFA+ GP+ +FVS HLI DM+F S + P Y + D ++
Sbjct: 62 VNKMGFFADVGPLSVFVSTHLISSDMKFNPSANPPAYVSPDETI 105
[102][TOP]
>UniRef100_Q8IJC9 DNA-directed RNA polymerase II, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8IJC9_PLAF7
Length = 177
Score = 107 bits (267), Expect = 7e-22
Identities = 53/135 (39%), Positives = 83/135 (61%), Gaps = 1/135 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+F I +N+ + P G + + L VEG CS ++G+V+ V I + G ++
Sbjct: 1 MYFVIEEWKNVIIKPSQLGPRYQQYIEDMLRNSVEGQCSVKYGYVICVIRIIHSEPGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTG + VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++IF+S IP E+
Sbjct: 61 DGTGMIVVKVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKIFISRTAIPKYFEYS 120
Query: 532 SG-DMPNYTTSDGSV 573
P +++ D ++
Sbjct: 121 EDLHYPCFSSGDYNI 135
[103][TOP]
>UniRef100_A9BK44 Rpb7 n=1 Tax=Cryptophyta RepID=A9BK44_9CRYP
Length = 175
Score = 106 bits (265), Expect = 1e-21
Identities = 52/130 (40%), Positives = 84/130 (64%), Gaps = 1/130 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI-GKGLI 348
MFF L +N+ + +YF +N++ NLVS L+ +VEG+ +G G +V +T I N GKG +
Sbjct: 1 MFFITTLNQNIYISAKYFKKNIKKNLVSTLLGNVEGSYAGPFGNIVIITEICNKWGKGKL 60
Query: 349 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
GT F V ++ + FRPFKGE+ ++++T + +GFF+EAG +QIFVS + +P+D ++
Sbjct: 61 IIGTPSAMFNVTFRAITFRPFKGEVFDSIITNLTNVGFFSEAGALQIFVSKNQLPNDFQY 120
Query: 529 QSGDMPNYTT 558
D + T
Sbjct: 121 NGKDKVFFNT 130
[104][TOP]
>UniRef100_A7AQQ9 DNA-directed RNA polymerase II, putative n=1 Tax=Babesia bovis
RepID=A7AQQ9_BABBO
Length = 175
Score = 106 bits (264), Expect = 1e-21
Identities = 54/134 (40%), Positives = 81/134 (60%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+F + + + + P G + + N+ L VEG CS ++G+VV V I G ++
Sbjct: 1 MYFVVEQWKIINVKPSQLGPSYQQNIEEMLRNQVEGHCSSKYGYVVCVIRIIQNEVGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTG + VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++ FVS I +
Sbjct: 61 DGTGMIVVNVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKAFVSRTAIQPSFVYD 120
Query: 532 SGDMPNYTTSDGSV 573
S D N +DG++
Sbjct: 121 S-DAANPCYTDGTI 133
[105][TOP]
>UniRef100_Q4XDG5 DNA-directed RNA polymerase II, putative n=2 Tax=Plasmodium
(Vinckeia) RepID=Q4XDG5_PLACH
Length = 177
Score = 105 bits (263), Expect = 2e-21
Identities = 48/119 (40%), Positives = 76/119 (63%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+F I +N+ + P G + + L +EG C+ ++G+++ V I + G ++
Sbjct: 1 MYFVIEEWKNVIIKPSQLGPKYQQYIEDMLRNSIEGQCTEKYGYIICVIRIMHSEPGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
DGTG + VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++IF+S IP E+
Sbjct: 61 DGTGMIVVKVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKIFISRTAIPKYFEY 119
[106][TOP]
>UniRef100_A1DBD6 RNA polymerase II subunit 7 n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1DBD6_NEOFI
Length = 167
Score = 105 bits (261), Expect = 3e-21
Identities = 46/125 (36%), Positives = 82/125 (65%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVISLHPSYFGPNMREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PGSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[107][TOP]
>UniRef100_A1C471 RNA polymerase II subunit 7 n=1 Tax=Aspergillus clavatus
RepID=A1C471_ASPCL
Length = 169
Score = 105 bits (261), Expect = 3e-21
Identities = 46/125 (36%), Positives = 82/125 (65%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVISLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PGSGSAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[108][TOP]
>UniRef100_Q4N989 DNA-directed RNA polymerase II subunit Rpb7, putative n=2
Tax=Theileria RepID=Q4N989_THEPA
Length = 175
Score = 104 bits (260), Expect = 4e-21
Identities = 54/134 (40%), Positives = 81/134 (60%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+F + + + L P G N + N+ L VEG C+ ++G+VV V I G ++
Sbjct: 1 MYFVVEQWKLINLKPCQLGPNYQQNIEEMLRDQVEGHCTNKYGYVVCVIRIVQNDMGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGT + VKYQ +VF+PFK E+L+A+VT VNK+GFFA+AGP++ FVS + I + +
Sbjct: 61 DGTAMIVVNVKYQAIVFKPFKDEVLDAIVTDVNKLGFFAQAGPLKAFVSRNSIHPNFVYD 120
Query: 532 SGDMPNYTTSDGSV 573
S D SDG++
Sbjct: 121 S-DSAYPCYSDGTI 133
[109][TOP]
>UniRef100_B3L236 Dna-directed rna polymerase ii, putative n=1 Tax=Plasmodium
knowlesi strain H RepID=B3L236_PLAKH
Length = 177
Score = 104 bits (260), Expect = 4e-21
Identities = 49/119 (41%), Positives = 75/119 (63%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+F I +N+ + P G + + L VEG C+ ++G+++ V I + G ++
Sbjct: 1 MYFVIEEWKNVIIKPSQLGPRYQQFIEDMLRNSVEGQCNAKYGYIICVIRIIHCEPGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
DGT + VKYQ +VF+PFK E+L+AVVT VNK+GFFA+AGP++IF+S IP E+
Sbjct: 61 DGTSMIVVKVKYQAIVFKPFKDEVLDAVVTDVNKLGFFAQAGPLKIFISRTAIPKYFEY 119
[110][TOP]
>UniRef100_B8MQK6 RNA polymerase II subunit 7 n=1 Tax=Talaromyces stipitatus ATCC
10500 RepID=B8MQK6_TALSN
Length = 169
Score = 104 bits (260), Expect = 4e-21
Identities = 46/125 (36%), Positives = 83/125 (66%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP +FG N+++ LV++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVVTLHPSFFGPNVKEYLVNRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVI 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PGSGHAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
G +P
Sbjct: 120 PGTVP 124
[111][TOP]
>UniRef100_A5KE18 DNA-directed RNA polymerase II, putative n=1 Tax=Plasmodium vivax
RepID=A5KE18_PLAVI
Length = 177
Score = 104 bits (259), Expect = 6e-21
Identities = 49/119 (41%), Positives = 75/119 (63%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+F I +N+ + P G + + L VEG C+ ++G+++ V I + G ++
Sbjct: 1 MYFVIEEWKNVIIKPSQLGPRYQQFIEDMLRNSVEGQCNAKYGYIICVIRIIHSEPGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
DGT + VKYQ +VF+PFK E+L+AVVT VNK+GFFA+AGP++IF+S IP E+
Sbjct: 61 DGTSMIVVKVKYQAIVFKPFKDEVLDAVVTDVNKLGFFAQAGPLKIFISRTAIPKFFEY 119
[112][TOP]
>UniRef100_A2R8K1 Complex: in S. pombe the DNA-dependent RNA-polymerase II consists
of 11 subunits n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2R8K1_ASPNC
Length = 167
Score = 104 bits (259), Expect = 6e-21
Identities = 46/125 (36%), Positives = 82/125 (65%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEEVKVITLHPSYFGPNMREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PGSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[113][TOP]
>UniRef100_Q7SH68 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
Tax=Neurospora crassa RepID=Q7SH68_NEUCR
Length = 150
Score = 103 bits (258), Expect = 7e-21
Identities = 46/113 (40%), Positives = 77/113 (68%)
Frame = +1
Query: 235 LRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFK 414
+ + + +KL+KDVEGTC+G + +++A+ ++ +G I G G F VKY+ VV+RPFK
Sbjct: 1 MHELVTTKLVKDVEGTCAGDY-YIIAIMDAFDVSEGRILPGNGLAEFTVKYRAVVWRPFK 59
Query: 415 GEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDGSV 573
GE+++A+V +N GFF +AGP+ IFVS+HL+P+++ F P T++ +
Sbjct: 60 GEVVDAIVFSINPHGFFCQAGPLSIFVSSHLMPEEIHFDPNATPPQFTNNADM 112
[114][TOP]
>UniRef100_B6QUL0 RNA polymerase II subunit 7 n=1 Tax=Penicillium marneffei ATCC
18224 RepID=B6QUL0_PENMQ
Length = 169
Score = 103 bits (257), Expect = 9e-21
Identities = 45/125 (36%), Positives = 82/125 (65%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP +FG N+++ L+++L ++ EG C+G H FV+ V + +IG G +
Sbjct: 1 MFFLKEETKVVTLHPSFFGPNVKEYLINRLNEEEEGRCTGDH-FVICVMDMVDIGDGRVI 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PGSGHAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
G +P
Sbjct: 120 PGTVP 124
[115][TOP]
>UniRef100_Q0CNG9 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
Tax=Aspergillus terreus NIH2624 RepID=Q0CNG9_ASPTN
Length = 174
Score = 102 bits (255), Expect = 2e-20
Identities = 45/125 (36%), Positives = 81/125 (64%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVISLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PSSGHAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLAVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[116][TOP]
>UniRef100_C8VMQ5 RNA polymerase II subunit 7 (AFU_orthologue; AFUA_8G05300) n=2
Tax=Emericella nidulans RepID=C8VMQ5_EMENI
Length = 169
Score = 102 bits (255), Expect = 2e-20
Identities = 46/125 (36%), Positives = 80/125 (64%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVITLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D+ ++
Sbjct: 60 PGNGQAEYTIKYRAIIWKPFRGETVDALVTSVKPTGIFTLAGPLSVFIARKNIPSDIRWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[117][TOP]
>UniRef100_B6H0W8 Pc12g03390 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H0W8_PENCW
Length = 167
Score = 102 bits (254), Expect = 2e-20
Identities = 44/125 (35%), Positives = 80/125 (64%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + +HP YFG N+R+ L+ +L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVISMHPSYFGPNMREYLIGRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVM 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G G + ++Y+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PGIGQAEYTIRYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[118][TOP]
>UniRef100_A4RF02 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4RF02_MAGGR
Length = 172
Score = 102 bits (254), Expect = 2e-20
Identities = 47/125 (37%), Positives = 76/125 (60%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP +FG+N+ + +V +L+ D EGTC G ++++V +I G I
Sbjct: 1 MFFLHNLERVVSLHPSFFGKNMHEIVVQRLLADTEGTCQGDF-YIISVMDAVDISPGKIV 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G F V Y+ VV+RPFKG+ ++ +V VN+ GFF GP+++F++ + P D+ +
Sbjct: 60 PGNAMAEFTVNYRAVVWRPFKGQTVDGIVDSVNQHGFFIAVGPLRVFITKQMCPPDVIYD 119
Query: 532 SGDMP 546
+ P
Sbjct: 120 ANASP 124
[119][TOP]
>UniRef100_Q2US04 DNA-directed RNA polymerase subunit E' n=1 Tax=Aspergillus oryzae
RepID=Q2US04_ASPOR
Length = 169
Score = 102 bits (253), Expect = 3e-20
Identities = 45/125 (36%), Positives = 81/125 (64%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVITLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PSSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[120][TOP]
>UniRef100_B8MXT0 RNA polymerase II subunit 7 n=1 Tax=Aspergillus flavus NRRL3357
RepID=B8MXT0_ASPFN
Length = 191
Score = 102 bits (253), Expect = 3e-20
Identities = 45/125 (36%), Positives = 81/125 (64%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVITLHPSYFGPNVREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++ IP D++++
Sbjct: 60 PSSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIARKNIPSDIKWE 119
Query: 532 SGDMP 546
+P
Sbjct: 120 PNTVP 124
[121][TOP]
>UniRef100_B2WC37 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
Tax=Pyrenophora tritici-repentis Pt-1C-BFP
RepID=B2WC37_PYRTR
Length = 171
Score = 101 bits (252), Expect = 4e-20
Identities = 49/132 (37%), Positives = 80/132 (60%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE+ +QLHP YFG +R ++ +L++ EG+ +G++ V + + I G +
Sbjct: 1 MFFLKELEKTIQLHPSYFGPLIRQHIHRELLQKEEGSSTGKYTIVCILDSFD-ISDGKVM 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
GTG + V Y+ VV+RP+KGE+++ +VT V + GFF + G +Q FV +IP +++F
Sbjct: 60 PGTGSAEYVVHYKAVVWRPYKGEVMDGIVTSVLRTGFFVDCGSLQAFVGRSMIPAEIKFD 119
Query: 532 SGDMPNYTTSDG 567
+ P T DG
Sbjct: 120 ANATPPQWTDDG 131
[122][TOP]
>UniRef100_B8C460 19kDa subunit of RNA polymerase n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C460_THAPS
Length = 183
Score = 101 bits (251), Expect = 5e-20
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGI--ENIGKGL 345
MF+ LE ++L P +FG+ LR +V L ++VEG +GFVV V + E I G+
Sbjct: 1 MFYVKTLEHEIELEPIHFGQKLRATIVRLLKEEVEGLALANYGFVVNVIEVPEEQIRSGI 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM 522
I TG V F VKY ++ RPF E+++A V N++GFFA GP++IFVS H +P+DM
Sbjct: 61 IEYDTGNVVFYVKYTALLLRPFINEVVDATVAQCNELGFFAYVGPLRIFVSKHSMPEDM 119
[123][TOP]
>UniRef100_B9PI55 DNA-directed RNA polymerase II 19 kDa polypeptide, putative n=2
Tax=Toxoplasma gondii RepID=B9PI55_TOXGO
Length = 207
Score = 99.8 bits (247), Expect = 1e-19
Identities = 50/134 (37%), Positives = 75/134 (55%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + N+ L P GR + + L + VEG C G+++ V I ++ G ++
Sbjct: 1 MFFVVEQWHNVALRPAQLGRRYTQYVETLLRQQVEGKCLHNLGYIICVIRIVHMEAGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTG V +YQ + F+PFK E+L+AV+T VNK+G FA+ GP+++FVS +P +Q
Sbjct: 61 DGTGMVIVAARYQAIAFKPFKDEVLDAVITDVNKLGLFAQCGPLKVFVSRASLPPSFVYQ 120
Query: 532 SGDMPNYTTSDGSV 573
T DG V
Sbjct: 121 DDSAVGCMT-DGEV 133
[124][TOP]
>UniRef100_B6KD73 DNA-directed RNA polymerase II subunit RPB7, putative n=1
Tax=Toxoplasma gondii ME49 RepID=B6KD73_TOXGO
Length = 207
Score = 99.8 bits (247), Expect = 1e-19
Identities = 50/134 (37%), Positives = 75/134 (55%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + N+ L P GR + + L + VEG C G+++ V I ++ G ++
Sbjct: 1 MFFVVEQWHNVALRPAQLGRRYTQYVETLLRQQVEGKCLHNLGYIICVIRIVHMEAGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
DGTG V +YQ + F+PFK E+L+AV+T VNK+G FA+ GP+++FVS +P +Q
Sbjct: 61 DGTGMVIVAARYQAIAFKPFKDEVLDAVITDVNKLGLFAQCGPLKVFVSRASLPPSFVYQ 120
Query: 532 SGDMPNYTTSDGSV 573
T DG V
Sbjct: 121 DDSAVGCMT-DGEV 133
[125][TOP]
>UniRef100_B7FYY8 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7FYY8_PHATR
Length = 181
Score = 97.4 bits (241), Expect = 7e-19
Identities = 51/119 (42%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGI--ENIGKGL 345
MF+ L+ + L P +FG L+ +V L + VEG +G+VV V + + I G+
Sbjct: 1 MFYVKTLDHEIVLEPVHFGPKLKATIVRLLKEHVEGLALANYGYVVNVIEVPEDQIRSGI 60
Query: 346 IRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM 522
I TG V F VKY ++ RPF E+L+AVVT N +GFFA GP++IFVS H +P+DM
Sbjct: 61 IEYDTGNVVFTVKYTALLLRPFLNEVLDAVVTQCNALGFFAFCGPLRIFVSKHSMPEDM 119
[126][TOP]
>UniRef100_B0Y9T8 RNA polymerase II subunit 7 n=2 Tax=Aspergillus fumigatus
RepID=B0Y9T8_ASPFC
Length = 139
Score = 95.9 bits (237), Expect = 2e-18
Identities = 42/109 (38%), Positives = 73/109 (66%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + + LHP YFG N+R+ L+++L ++ EG C+G H FV+ V + +IG+G +
Sbjct: 1 MFFLKEETKVISLHPSYFGPNMREYLINRLNEEEEGRCTGDH-FVICVMDMVDIGEGRVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVS 498
G+G + +KY+ ++++PF+GE ++A+VT V G F AGP+ +F++
Sbjct: 60 PGSGQAEYTIKYRAIIWKPFRGETVDAIVTSVKPTGIFTLAGPLSVFIA 108
[127][TOP]
>UniRef100_Q7RCA7 RNA polymerase II subunit 7 n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RCA7_PLAYO
Length = 193
Score = 95.5 bits (236), Expect = 3e-18
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 16/135 (11%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+F I +N+ + P G + + L +EG C+ ++G+++ V I + G ++
Sbjct: 1 MYFVIEEWKNVIIKPSQLGPKYQQYIEDMLRNSIEGQCTEKYGYIICVIRIMHSEPGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGE----------------ILEAVVTMVNKMGFFAEAGPV 483
DGTG + VKYQ +VF+PFK E +L+A+VT VNK+GFFA+AGP+
Sbjct: 61 DGTGMIVVKVKYQAIVFKPFKDEVLFKINKLINKLIKSFVLDAIVTDVNKLGFFAQAGPL 120
Query: 484 QIFVSNHLIPDDMEF 528
+IF+S IP E+
Sbjct: 121 KIFISRTAIPKYFEY 135
[128][TOP]
>UniRef100_A9RP65 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RP65_PHYPA
Length = 190
Score = 94.0 bits (232), Expect = 7e-18
Identities = 59/140 (42%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNL--RDNLVSKLMKDVEGT-CSGRHGFVVAVTGIENIGKG 342
MFF + L R + + P+ G L R ++ +L+KD + CS HGF V VT +E++ G
Sbjct: 1 MFFEVELRRLVVVEPQELGDELHTRRAMIRRLLKDFDAERCSEEHGFHVTVTTLEDVSPG 60
Query: 343 LIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDM 522
IR GTG V F V ++C+VFRP + EILEA VT V + GF A G +IFV + D
Sbjct: 61 KIRSGTGSVIFWVTFKCIVFRPIRNEILEAEVTDVLERGFLAACGASRIFVPRKEM-DGF 119
Query: 523 EFQSGDMPNYT---TSDGSV 573
EF+ G Y S GSV
Sbjct: 120 EFRPGASLEYNEWHDSSGSV 139
[129][TOP]
>UniRef100_A3FQ92 DNA-directed RNA polymerase II, putative n=1 Tax=Cryptosporidium
parvum Iowa II RepID=A3FQ92_CRYPV
Length = 178
Score = 93.6 bits (231), Expect = 1e-17
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + L RN+ + P G +++ L VEG + +G+VV V I G ++
Sbjct: 1 MFFFVELWRNISVKPSQLGPRYNEHIDDILRSQVEGQRAPPYGYVVCVIKIILKQPGRVQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV-QIFVSNHLIPDDMEF 528
D TG + PVKYQ +V+RP KGE+++ VV VN++G + GP+ ++FVS +P++M +
Sbjct: 61 DSTGLIIVPVKYQAIVYRPIKGEVVDGVVESVNELGVIVDCGPLKRVFVSQSALPENMVY 120
Query: 529 QSG 537
+SG
Sbjct: 121 KSG 123
[130][TOP]
>UniRef100_B6AK20 DNA-directed RNA polymerase II subunit RPB7, putative n=1
Tax=Cryptosporidium muris RN66 RepID=B6AK20_9CRYT
Length = 176
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + L +N+ L P G +++ L VEG G+VV V I G I+
Sbjct: 1 MFFFVELWKNISLSPNQLGPRYDEHIDDILRSQVEGQWITSFGYVVCVVRILLRQPGRIQ 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV-QIFVSNHLIPDDMEF 528
DGTG + P+KYQ +V+RP KGE+++ V VN++G GP+ ++FVS +P+++ +
Sbjct: 61 DGTGLIIVPIKYQAIVYRPMKGEVIDGTVESVNELGIIVNCGPLKRVFVSQSALPENISY 120
Query: 529 QSG 537
SG
Sbjct: 121 SSG 123
[131][TOP]
>UniRef100_C4VAF6 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01
RepID=C4VAF6_NOSCE
Length = 155
Score = 91.7 bits (226), Expect = 4e-17
Identities = 45/118 (38%), Positives = 73/118 (61%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + L+P Y G ++ + L K +EG+C+ G+V++V I+++ +G +
Sbjct: 1 MFFVKDFTHIIHLNPCYLGPKIQSLIKDYLYKTIEGSCNDS-GYVISVLEIDDVSEGTV- 58
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDME 525
G +F +KY+ +V +PFKGE +EA V +NKMG FA GP+ +FVSNH IP +++
Sbjct: 59 SLNGATSFKIKYKALVLKPFKGETMEASVVEINKMGVFASVGPLTVFVSNHQIPSEIQ 116
[132][TOP]
>UniRef100_Q0UVK5 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UVK5_PHANO
Length = 188
Score = 89.7 bits (221), Expect = 1e-16
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LE+ +QLHP YFG +R ++ +L++ EG+ +G++ +V + +I G +
Sbjct: 1 MFFLKELEKTIQLHPSYFGPLIRSHIHRELLQKEEGSSTGKYT-IVCILDAFDISDGKVL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFV------------ 495
G+G + V Y+ +V+RP+KGE+++ VVT V + GFF + G +Q FV
Sbjct: 60 PGSGHAEYIVHYKAIVWRPYKGEVMDGVVTSVLRTGFFVDCGSLQAFVGRNVRMPCASCR 119
Query: 496 -----SNHLIPDDMEFQSGDMPNYTTSDG 567
+ +IP D+ F + P T +G
Sbjct: 120 YPSTNTTQMIPSDITFDANATPPQWTDNG 148
[133][TOP]
>UniRef100_Q8SRG5 DNA-DIRECTED RNA POLYMERASE II 19kDa SUBUNIT n=1
Tax=Encephalitozoon cuniculi RepID=Q8SRG5_ENCCU
Length = 155
Score = 89.4 bits (220), Expect = 2e-16
Identities = 48/115 (41%), Positives = 68/115 (59%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF +N+ L P Y G N++ + L+ VEG+CS G+VV V I+ I + I
Sbjct: 1 MFFVRDFVQNIHLSPNYLGPNIQALIEEYLLSKVEGSCSSS-GYVVMVLSIDEISESRII 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPD 516
TG F VKY+ + +P KGE+++A V NKMG FA GP+ +F+SNH IP+
Sbjct: 60 L-TGETIFTVKYKALTLKPLKGEVIDANVVETNKMGVFASVGPLTVFISNHQIPN 113
[134][TOP]
>UniRef100_A9USP9 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9USP9_MONBE
Length = 174
Score = 88.6 bits (218), Expect = 3e-16
Identities = 47/134 (35%), Positives = 70/134 (52%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF L ++ LHPR+ +NL L ++L +VE HG+V+AV I+ I +G I
Sbjct: 1 MFFTETLTHDVLLHPRFLDQNLEAILKTQLYSEVECKVHRSHGYVLAVIKIDRISEGRIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G + F V Y V+ RP ++++ +VT VN G F GP+ FVSN IPD
Sbjct: 61 FNRGEILFNVTYTAVILRPVPKQVIDTMVTSVNNRGIFVSIGPLTAFVSNSWIPDMTFDS 120
Query: 532 SGDMPNYTTSDGSV 573
+ P Y ++ +
Sbjct: 121 DANPPRYISAKDGI 134
[135][TOP]
>UniRef100_C7YKB3 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YKB3_NECH7
Length = 147
Score = 84.3 bits (207), Expect = 6e-15
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF LER + LHP +FGRN+ D + KL+ DVEGTC+G + F++++ +I +G I
Sbjct: 1 MFFLYNLERRVTLHPSFFGRNMHDLVTHKLLTDVEGTCAGSY-FIISIMDTFDISEGRIL 59
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEIL 426
G G F V Y+ VV+RPFKGE L
Sbjct: 60 PGNGLAEFTVGYRAVVWRPFKGETL 84
[136][TOP]
>UniRef100_C5KMQ5 DNA-directed RNA polymerase II, putative n=2 Tax=Perkinsus marinus
ATCC 50983 RepID=C5KMQ5_9ALVE
Length = 149
Score = 83.6 bits (205), Expect = 1e-14
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGKGLI 348
M+F + + + + P G L ++L ++EG S H G +V + I + K I
Sbjct: 1 MYFVLTDNKTVAMKPSDLGPMFDIRLDTQLRVELEGNLSKNHDGTIVHIINIVDKSKPKI 60
Query: 349 RDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEF 528
+DGTG V +Q ++FRPFK E+++ V+ V+K+GFFA GP+++FVS +PDD+ F
Sbjct: 61 QDGTGMALVNVVFQGIIFRPFKNEVMDCWVSEVSKLGFFAYFGPMKVFVSRSSMPDDVIF 120
Query: 529 QSGDMP-NYTTSDGSV 573
+ P Y+ +D +V
Sbjct: 121 RETATPVCYSDADQTV 136
[137][TOP]
>UniRef100_Q1WA80 DNA directed RNA polymerase II polypeptide G (Fragment) n=1
Tax=Ictalurus punctatus RepID=Q1WA80_ICTPU
Length = 86
Score = 81.3 bits (199), Expect = 5e-14
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +1
Query: 373 FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGDMPN 549
+PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S H IP +MEF + + P
Sbjct: 5 YPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPC 64
Query: 550 YTTSDGSV 573
Y T D V
Sbjct: 65 YKTVDEDV 72
[138][TOP]
>UniRef100_C6T5N3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T5N3_SOYBN
Length = 180
Score = 75.1 bits (183), Expect = 4e-12
Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 381
+ LH R L D V K KD+ G+ +AVT +E IG+G +R TG V FPV
Sbjct: 23 LMLHRAIIVRLLSDFAVKKATKDL--------GYFLAVTTLEKIGEGKVRQHTGDVLFPV 74
Query: 382 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 516
+ + F+ FKGEILE VV V K G F GP++ +++SN +PD
Sbjct: 75 VFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMPD 120
[139][TOP]
>UniRef100_A2F013 RNA polymerase Rpb7, N-terminal domain containing protein n=1
Tax=Trichomonas vaginalis G3 RepID=A2F013_TRIVA
Length = 182
Score = 72.8 bits (177), Expect = 2e-11
Identities = 34/120 (28%), Positives = 64/120 (53%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MFF + LE ++L P + + + +L EG G ++ +T I IGKG +
Sbjct: 11 MFFEVELEHQLKLLPIFLSQGTSQTIEKQLKHQKEGQFMLGKGLILKITKIIEIGKGRVS 70
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
TG ++ VK++ +V RP++ +++A + ++N+ A AGP+ + V L+ D +F+
Sbjct: 71 SRTGCASYSVKFKALVLRPYEDLVIDAKIMILNEFAIMANAGPLTVAVPKTLLEKDYDFE 130
[140][TOP]
>UniRef100_Q98S95 RNA polymerase II RPB7 subunit-like protein n=1 Tax=Guillardia
theta RepID=Q98S95_GUITH
Length = 196
Score = 72.4 bits (176), Expect = 2e-11
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Frame = +1
Query: 160 RNKKMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGK 339
R+ M+ + L +N+ + + L+ L+++L+ EG G G ++ + I+N
Sbjct: 23 RHFPMYAIMTLNQNLFIPAKLLNNQLKSTLIAQLITLTEGLPFGNVGSIIMIINIDNQKL 82
Query: 340 -GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPD 516
G I G V F V +Q VV + FKGEI++A+V + G FA AG + IF+SN I
Sbjct: 83 YGKILPGFSSVLFKVNFQAVVLKIFKGEIIDAIVKNITSFGIFASAGILNIFISNKFISQ 142
Query: 517 DM-EFQSGDMPNYTTS 561
D+ QS + N+ S
Sbjct: 143 DLISQQSQTLFNFKNS 158
[141][TOP]
>UniRef100_Q9LIK8 RNA polymerase II fifth largest subunit-like protein n=1
Tax=Arabidopsis thaliana RepID=Q9LIK8_ARATH
Length = 157
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +1
Query: 298 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 477
G+++ T +ENIG+G I++ TG + FPV + + F+ FKGEI+ VV V+K G F ++G
Sbjct: 29 GYLITPTILENIGEGKIKEQTGEIQFPVVFNGICFKMFKGEIVHGVVHKVHKTGVFLKSG 88
Query: 478 PVQIFVSNHLIPDDMEFQSGDMP 546
P +I +H+ EF G+ P
Sbjct: 89 PYEIIYLSHMKMPGYEFIPGENP 111
[142][TOP]
>UniRef100_Q8LE42 RNA polymerase II fifth largest subunit-like protein n=1
Tax=Arabidopsis thaliana RepID=Q8LE42_ARATH
Length = 174
Score = 70.1 bits (170), Expect = 1e-10
Identities = 33/83 (39%), Positives = 52/83 (62%)
Frame = +1
Query: 298 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 477
G+++ T +ENIG+G I++ TG + FPV + + F+ FKGEI+ VV V+K G F ++G
Sbjct: 46 GYLITPTILENIGEGKIKEQTGEIQFPVVFNGICFKMFKGEIVHGVVHKVHKTGVFLKSG 105
Query: 478 PVQIFVSNHLIPDDMEFQSGDMP 546
P +I +H+ EF G+ P
Sbjct: 106 PYEIIYLSHMKMPGYEFIPGENP 128
[143][TOP]
>UniRef100_C5Z0L3 Putative uncharacterized protein Sb09g004460 n=1 Tax=Sorghum
bicolor RepID=C5Z0L3_SORBI
Length = 175
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGT-CSGRHGFVVAVTGIENIGK 339
+F + N+ + P R LR ++ +L++DV S HG+ VAV+ ++ I +
Sbjct: 2 VFLEAEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNRRASKEHGYYVAVSQLKAISE 61
Query: 340 GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 516
G +R+ TG V FPV + C+ +P KGE++ V + K G F ++GPV+ IF++ + D
Sbjct: 62 GKVRELTGDVLFPVSFTCITLKPMKGEVMVGHVDRILKHGVFLKSGPVESIFLAEKSMSD 121
[144][TOP]
>UniRef100_Q75M02 Os05g0157100 protein n=2 Tax=Oryza sativa RepID=Q75M02_ORYSJ
Length = 175
Score = 69.3 bits (168), Expect = 2e-10
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Frame = +1
Query: 187 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 363
VL QL P+ G LR ++ +L++D+ + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12 VLISPSQLSPQ--GLLLRKAVIVRLLEDIANRKASKDHGYYIAVSELKAISEGKVRELTG 69
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 516
V FPV + C+ +P KGE+L V + K G F ++GP++ IF+S + D
Sbjct: 70 DVLFPVTFTCITQKPMKGEVLVGSVDKILKHGIFLKSGPIESIFLSEKTMSD 121
[145][TOP]
>UniRef100_B9S9D8 DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative n=1
Tax=Ricinus communis RepID=B9S9D8_RICCO
Length = 176
Score = 68.9 bits (167), Expect = 3e-10
Identities = 38/99 (38%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Frame = +1
Query: 226 GRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVF 402
G L+ +++ +L++D + + G+ +AVT +E+IG+G +R+ TG V FPV + + F
Sbjct: 22 GLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGEGKVREHTGDVLFPVVFNGITF 81
Query: 403 RPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 516
+ F+GEILE VV V K G F GP++ I++S +PD
Sbjct: 82 KIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120
[146][TOP]
>UniRef100_A7NX05 Chromosome chr5 scaffold_2, whole genome shotgun sequence n=2
Tax=Vitis vinifera RepID=A7NX05_VITVI
Length = 191
Score = 68.9 bits (167), Expect = 3e-10
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 298 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 477
G+ +AVT +ENIG+G +R +G V FPV + CV F+ F+GEIL+ VV V K G G
Sbjct: 61 GYFLAVTTLENIGEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCG 120
Query: 478 PVQ-IFVSNHLIPD 516
PV+ I++S +PD
Sbjct: 121 PVENIYLSCQKMPD 134
[147][TOP]
>UniRef100_Q75KS7 Putative receptor kinase n=1 Tax=Oryza sativa Japonica Group
RepID=Q75KS7_ORYSJ
Length = 715
Score = 67.0 bits (162), Expect = 1e-09
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 187 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 363
VL +L P+ G LR ++ L++++ + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 47 VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 104
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 540
V FPV + C+ +P KGEIL V + K G F ++GP++ IF+S + D ++ G+
Sbjct: 105 DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 163
Query: 541 MPNY 552
P +
Sbjct: 164 NPMF 167
[148][TOP]
>UniRef100_Q0DJV3 Os05g0224700 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DJV3_ORYSJ
Length = 782
Score = 67.0 bits (162), Expect = 1e-09
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 187 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 363
VL +L P+ G LR ++ L++++ + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12 VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 69
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 540
V FPV + C+ +P KGEIL V + K G F ++GP++ IF+S + D ++ G+
Sbjct: 70 DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 128
Query: 541 MPNY 552
P +
Sbjct: 129 NPMF 132
[149][TOP]
>UniRef100_B9FN64 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9FN64_ORYSJ
Length = 796
Score = 67.0 bits (162), Expect = 1e-09
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 187 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 363
VL +L P+ G LR ++ L++++ + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12 VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 69
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 540
V FPV + C+ +P KGEIL V + K G F ++GP++ IF+S + D ++ G+
Sbjct: 70 DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 128
Query: 541 MPNY 552
P +
Sbjct: 129 NPMF 132
[150][TOP]
>UniRef100_B8AZD0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8AZD0_ORYSI
Length = 175
Score = 67.0 bits (162), Expect = 1e-09
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Frame = +1
Query: 187 VLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTG 363
VL +L P+ G LR ++ L++++ + + HG+ +AV+ ++ I +G +R+ TG
Sbjct: 12 VLISPSELSPK--GLLLRKAVIVSLLEEIANRKASKDHGYYIAVSELKAISEGKVRELTG 69
Query: 364 FVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGD 540
V FPV + C+ +P KGEIL V + K G F ++GP++ IF+S + D ++ G+
Sbjct: 70 DVLFPVTFTCITQKPTKGEILVGSVDKILKHGVFLKSGPIESIFLSEKTL-SDYKYIGGE 128
Query: 541 MPNY 552
P +
Sbjct: 129 NPMF 132
[151][TOP]
>UniRef100_B4FXC7 DNA-directed RNA polymerase II 19 kDa polypeptide n=1 Tax=Zea mays
RepID=B4FXC7_MAIZE
Length = 175
Score = 66.6 bits (161), Expect = 1e-09
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRN---LRDNLVSKLMKDVEGT-CSGRHGFVVAVTGIENIGK 339
+F + N+ + P R LR ++ +L++DV S HG+ +AV ++ I +
Sbjct: 2 VFLEAEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNRRASKEHGYYIAVNQLKAISE 61
Query: 340 GLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQ 486
G +R+ TG V FPV + C+ +P KGE++ V + K G F ++GPV+
Sbjct: 62 GKVRELTGDVLFPVSFTCITQKPMKGEVMVGHVDRILKHGVFLKSGPVE 110
[152][TOP]
>UniRef100_B9HUM9 Predicted protein n=2 Tax=Populus trichocarpa RepID=B9HUM9_POPTR
Length = 193
Score = 65.5 bits (158), Expect = 3e-09
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Frame = +1
Query: 160 RNKKMFFHIVLERNMQLHPRYF---GRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIE 327
+ KKMF + L N+ + G L+ ++V L+ D + + G+ +AV+ +E
Sbjct: 14 KGKKMFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKDLGYYLAVSTLE 73
Query: 328 NIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHL 507
+IG+G +R TG V FPV + + F+ FKGEILE VV V K G GP++ + +
Sbjct: 74 SIGEGKVRQHTGDVLFPVVFSGITFKIFKGEILEGVVHKVLKHGVLLRCGPIENIYLSSM 133
Query: 508 IPDDMEFQSGDMP 546
D + G+ P
Sbjct: 134 KMLDYRYVPGENP 146
[153][TOP]
>UniRef100_B9HUM8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HUM8_POPTR
Length = 189
Score = 65.1 bits (157), Expect = 4e-09
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = +1
Query: 244 NLVSKLMKDVEGTCSGR-HGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGE 420
++V+ L+KD+ + + HG+ +AVT +++IGKG + + +G V F V+++C F P KGE
Sbjct: 28 SIVTHLLKDLLSMKASKDHGYFLAVTNLKSIGKGEVVNKSGDVLFHVEFKCRTFMPMKGE 87
Query: 421 ILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPDDMEFQSGDMPNYTTSD 564
IL+ VV + G GPV+ IF+S +P + ++ S + P + +
Sbjct: 88 ILQGVVHRTFRHGVLLRCGPVKYIFLSARKMP-NYQYTSEENPVFLNDE 135
[154][TOP]
>UniRef100_B7FLW9 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FLW9_MEDTR
Length = 180
Score = 65.1 bits (157), Expect = 4e-09
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +1
Query: 229 RNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRP 408
R L D K KD+ G+ +AVT ++ IG+G +R TG V FPV + V F+
Sbjct: 32 RLLSDFAAKKATKDM--------GYFLAVTTLDKIGEGKVRQHTGDVLFPVVFNAVTFKI 83
Query: 409 FKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIP 513
FKGE+LE VV V K G F GP++ ++S+ +P
Sbjct: 84 FKGEVLEGVVHKVLKHGVFMRIGPIENAYLSSSKMP 119
[155][TOP]
>UniRef100_O23322 RNA polymerase II fifth largest subunit like protein n=1
Tax=Arabidopsis thaliana RepID=O23322_ARATH
Length = 161
Score = 64.7 bits (156), Expect = 5e-09
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 298 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 477
G+ VAVT ++ IG+G IR+ TG V FPV + + F+ FKGEI+ VV V K G F G
Sbjct: 30 GYYVAVTTLDKIGEGKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCG 89
Query: 478 PVQ-IFVSNHLIPD 516
P++ +++S +PD
Sbjct: 90 PIENVYLSYTKMPD 103
[156][TOP]
>UniRef100_A6QRA1 At4g14660 n=1 Tax=Arabidopsis thaliana RepID=A6QRA1_ARATH
Length = 178
Score = 64.7 bits (156), Expect = 5e-09
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +1
Query: 298 GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAG 477
G+ VAVT ++ IG+G IR+ TG V FPV + + F+ FKGEI+ VV V K G F G
Sbjct: 47 GYYVAVTTLDKIGEGKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCG 106
Query: 478 PVQ-IFVSNHLIPD 516
P++ +++S +PD
Sbjct: 107 PIENVYLSYTKMPD 120
[157][TOP]
>UniRef100_O29148 DNA-directed RNA polymerase, subunit E' (RpoE1) n=1
Tax=Archaeoglobus fulgidus RepID=O29148_ARCFU
Length = 189
Score = 63.9 bits (154), Expect = 8e-09
Identities = 33/116 (28%), Positives = 55/116 (47%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+ I L +++ P G ++ + S L + EG +G ++ + IE IG+G I
Sbjct: 1 MYARIKLRDTVRVPPSKLGEDIEKVINSLLWEQFEGRLDREYGMIIGIESIEEIGEGRII 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
+G G V F V + + FRP E++E V + + G F GP + + DD
Sbjct: 61 EGDGGVYFDVVFNAICFRPLHQEVVEGEVIEIVEFGAFVSIGPFDALLHMSQVTDD 116
[158][TOP]
>UniRef100_A7I4V6 DNA-directed RNA polymerase n=1 Tax=Candidatus Methanoregula boonei
6A8 RepID=A7I4V6_METB6
Length = 213
Score = 63.5 bits (153), Expect = 1e-08
Identities = 33/116 (28%), Positives = 59/116 (50%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M++ + LE +++ P G L ++ L + +EG+ G +AVT +E++G+G I
Sbjct: 1 MYYKMTLEDKVRVPPNRLGEKLDKVILEVLQEQLEGSIDKELGVFIAVTKVEHVGEGEIV 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
G G V + VK++ +V R E++E +V G F GP+ + I D+
Sbjct: 61 PGDGGVYYDVKFEGLVLRLALQEVIEGIVVETTSFGAFISLGPIDAMLHVSQISDE 116
[159][TOP]
>UniRef100_A3CXR5 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanoculleus
marisnigri JR1 RepID=A3CXR5_METMJ
Length = 188
Score = 63.5 bits (153), Expect = 1e-08
Identities = 32/116 (27%), Positives = 59/116 (50%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M++ + LE +++ P G +L +++ L + +EG+ + G +AVT I N+G+G +
Sbjct: 1 MYYKMTLEDKVRVPPHRLGEDLEKVILNVLQEQLEGSIAKEIGIFIAVTNILNVGEGELI 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
G G V + V+++ V R E++E V G F GP+ + I D+
Sbjct: 61 PGDGAVYYDVRFEAAVLRLALQEVIEGQVVETTSFGAFVSLGPIDAMLHVSQISDE 116
[160][TOP]
>UniRef100_C4JIV5 DNA-directed RNA polymerase II 19 kDa polypeptide n=1
Tax=Uncinocarpus reesii 1704 RepID=C4JIV5_UNCRE
Length = 199
Score = 62.8 bits (151), Expect = 2e-08
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +1
Query: 385 YQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ-SGDMPNYTTS 561
Y+ +V++PFKGE ++A+VT V G FAE GP+ +FVS HLIP ++++ P YT +
Sbjct: 2 YRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWDPDATPPQYTDN 61
Query: 562 DGSV 573
V
Sbjct: 62 ADQV 65
[161][TOP]
>UniRef100_Q8I150 CG31155-PA (Fragment) n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q8I150_DROPS
Length = 73
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +1
Query: 184 IVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIG 336
I LE + LHPRYFG L + + KL +VEGTC+G++GFV+AVT I+ IG
Sbjct: 23 ISLEHEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTTIDQIG 73
[162][TOP]
>UniRef100_B9HKE3 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HKE3_POPTR
Length = 176
Score = 61.6 bits (148), Expect = 4e-08
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 226 GRNLRDNLVSKLMKDVEGTCSGRH-GFVVAVTGIENIGKGLIRDGTGFVTFPVKYQCVVF 402
G L+ ++V +L+ D + + G+ +AV+ +E+IG+G +R TG V FPV + + F
Sbjct: 22 GLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGEGKVRQHTGDVLFPVVFSGITF 81
Query: 403 RPFKGEILEAVVTMVNKMGFFAEAGPVQ-IFVSNHLIPD 516
+ F+GEIL+ +V V K G GP++ I++S +PD
Sbjct: 82 KIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120
[163][TOP]
>UniRef100_C8S8R3 DNA-directed RNA polymerase n=1 Tax=Ferroglobus placidus DSM 10642
RepID=C8S8R3_FERPL
Length = 188
Score = 61.6 bits (148), Expect = 4e-08
Identities = 31/116 (26%), Positives = 56/116 (48%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+ + + +++ P G ++ + + L + EG +G +V + IE IG+G I
Sbjct: 1 MYARVKIRDTVRVPPNRLGEDMEEVINELLWEQFEGKLDREYGMIVGIESIEEIGEGRII 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
+G G V F V + + F+P E++E V + + G F GP+ + I DD
Sbjct: 61 EGDGGVYFDVIFNAITFKPLLQEVVEGEVVEIVEFGAFVSIGPMDGLLHMSQIMDD 116
[164][TOP]
>UniRef100_UPI000150A069 RNA polymerase Rpb7, N-terminal domain containing protein n=1
Tax=Tetrahymena thermophila RepID=UPI000150A069
Length = 173
Score = 60.1 bits (144), Expect = 1e-07
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Frame = +1
Query: 172 MFFHIV-LERNMQLHPRYFGR---------NLRDNLVSKLMKDVEGTCSGRHGFVVAVTG 321
MF+H L +Q+HP + G N D L +L++ VEG S HG+++ V
Sbjct: 1 MFYHTSGLRTILQIHPTHMGMLIGNDKVNLNNNDLLKKELIEKVEGKKSNEHGYIILVVN 60
Query: 322 IENIGKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIF-VS 498
+ + K LI D GF+ +++ + F+P E ++ +T + + GP+ IF V
Sbjct: 61 LRYMSKPLI-DYDGFIKVEIQFDALTFKPQLKEYIDIQITEIKQNHIAGSVGPMNIFYVP 119
Query: 499 NHLIPDDMEFQSGD 540
N +P ++ + D
Sbjct: 120 NRKLPQQLQNELKD 133
[165][TOP]
>UniRef100_B8GFC6 DNA-directed RNA polymerase n=1 Tax=Methanosphaerula palustris
E1-9c RepID=B8GFC6_METPE
Length = 199
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/116 (27%), Positives = 58/116 (50%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M++ ++LE +++ P G +L ++ L + +EG+ G +AVT + +G+G +
Sbjct: 1 MYYKLLLEDKVRVPPHRLGEDLIKVILDVLQEQLEGSIDKEIGIFIAVTKVIEVGEGEMV 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
G G V + VK++ + R E+LE VV G F GP+ + I D+
Sbjct: 61 PGDGAVYYDVKFEALGLRLSLQEVLEGVVVETTTFGAFVSLGPIDAMLHVSQISDE 116
[166][TOP]
>UniRef100_A2SR75 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanocorpusculum
labreanum Z RepID=A2SR75_METLZ
Length = 190
Score = 59.3 bits (142), Expect = 2e-07
Identities = 32/116 (27%), Positives = 53/116 (45%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M++ + L +++ P G +L ++ L + EG+ G +AVTG+ +G G I
Sbjct: 1 MYYKLKLNDKVRVPPERMGEDLNTVILDVLQEQFEGSVDKEMGIFIAVTGVNRVGDGEII 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
G + V ++ VV R EI+E VV G F GP+ + I D+
Sbjct: 61 YSDGGAYYDVDFEAVVLRLSLQEIIEGVVVETTSFGAFVSLGPIDAMLHMSQISDE 116
[167][TOP]
>UniRef100_C9RIC2 DNA-directed RNA polymerase n=1 Tax=Methanocaldococcus vulcanius M7
RepID=C9RIC2_9EURY
Length = 189
Score = 59.3 bits (142), Expect = 2e-07
Identities = 33/106 (31%), Positives = 56/106 (52%)
Frame = +1
Query: 202 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 381
+++ P FG++L++ + LM+ EG GFV+++ I++IG G + G G PV
Sbjct: 11 VKVPPEEFGKDLKETIKKILMEKYEGRLDKDIGFVLSIVDIKDIGDGKVVHGDGSAYHPV 70
Query: 382 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
++ +V+ P E++E V V + G F GP+ V I DD
Sbjct: 71 IFETLVYLPEMYELVEGEVVDVVEFGSFVRLGPLDGLVHVSQIMDD 116
[168][TOP]
>UniRef100_Q57840 DNA-directed RNA polymerase subunit E' n=1 Tax=Methanocaldococcus
jannaschii RepID=RPOE1_METJA
Length = 187
Score = 59.3 bits (142), Expect = 2e-07
Identities = 31/106 (29%), Positives = 57/106 (53%)
Frame = +1
Query: 202 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 381
+++ P FG++L++ + LM+ EG GFV+++ +++IG+G + G G PV
Sbjct: 11 VKVPPEEFGKDLKETVKKILMEKYEGRLDKDVGFVLSIVDVKDIGEGKVVHGDGSAYHPV 70
Query: 382 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
++ +V+ P E++E V V + G F GP+ + I DD
Sbjct: 71 VFETLVYIPEMYELIEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDD 116
[169][TOP]
>UniRef100_A0B8S5 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanosaeta
thermophila PT RepID=A0B8S5_METTP
Length = 206
Score = 58.2 bits (139), Expect = 5e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+ + LE +++ P G L D + L E G +VA+ G+++IG+G I
Sbjct: 1 MYKRMKLEGVVRIPPEDMGNPLNDAVEMALRNKYEARVDRTLGAIVAILGVDSIGEGRII 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGP 480
G G V + V + VVF+P E++E V + K G F GP
Sbjct: 61 AGDGAVYYDVIFDAVVFKPEMQEVVEGEVVEIVKFGAFVSIGP 103
[170][TOP]
>UniRef100_A8TGB5 DNA-directed RNA polymerase n=1 Tax=Methanococcus voltae A3
RepID=A8TGB5_METVO
Length = 211
Score = 58.2 bits (139), Expect = 5e-07
Identities = 32/122 (26%), Positives = 58/122 (47%)
Frame = +1
Query: 154 KGRNKKMFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENI 333
K R M+ + +E +++ P+ FG L+DN+ LM+ EG GF++A+ I+ I
Sbjct: 17 KERGVYMYKILTIEDTIRIPPKMFGNPLKDNVQKVLMEKYEGILDKDLGFILAIEDIDQI 76
Query: 334 GKGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIP 513
+G I G G + + + P E++E + + + G F GP+ + +
Sbjct: 77 SEGDIIYGDGAAYHDTTFNILTYEPEVHEMIEGEIVDIVEFGAFIRLGPLDGLIHISQVM 136
Query: 514 DD 519
DD
Sbjct: 137 DD 138
[171][TOP]
>UniRef100_C5U6S4 DNA-directed RNA polymerase n=1 Tax=Methanocaldococcus infernus ME
RepID=C5U6S4_9EURY
Length = 184
Score = 57.8 bits (138), Expect = 6e-07
Identities = 30/106 (28%), Positives = 55/106 (51%)
Frame = +1
Query: 202 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 381
+++ P FG +L++ + L++ EG GFV+++ ++ IG+G + G G PV
Sbjct: 11 VRIPPSKFGSDLKETVKEILIEKYEGMLEKNLGFVLSIIDVKEIGEGRVIHGDGSAYHPV 70
Query: 382 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
++ ++++P E++E V V G F GP+ V I DD
Sbjct: 71 VFEALIYKPEIYELVEGEVVDVVDFGLFVRLGPLDGLVHVSQIMDD 116
[172][TOP]
>UniRef100_Q12TT6 DNA-directed RNA polymerase subunit E' n=1 Tax=Methanococcoides
burtonii DSM 6242 RepID=Q12TT6_METBU
Length = 192
Score = 57.4 bits (137), Expect = 8e-07
Identities = 36/126 (28%), Positives = 63/126 (50%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+ + L+ +++ PR G ++ ++ L + +EG G +VA+T IE +G+G I
Sbjct: 1 MYKRMKLKDTIRVAPRLLGEDVGVSVKDALKEKLEGRVDKALGSIVAITDIEEVGEGHIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G G V + V ++ ++F P E++E +V + G F G + + I DD F
Sbjct: 61 VGDGAVYYDVIFEAIIFIPQLQEVIEGLVVETVEFGAFVSIGAMDGLLHVSQITDD--FM 118
Query: 532 SGDMPN 549
S D N
Sbjct: 119 SYDGKN 124
[173][TOP]
>UniRef100_B6K0P2 RNA polymerase III subunit Rpc25 n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6K0P2_SCHJY
Length = 205
Score = 56.2 bits (134), Expect = 2e-06
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF V+ +++HP F + ++ L ++ K + G +A+ IG+G+I+
Sbjct: 1 MFVLSVISDVVKIHPSDFWKPTKEALSDEINKKYANKVIQQVGLAIAIFDFLTIGEGIIK 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPV-QIFVSNHLIPD 516
G G VK++ +VFRPF+GE++ + ++G G IFV ++PD
Sbjct: 61 FGDGCSYMNVKFRLLVFRPFRGEVMLGRIKSCTELGIRVTLGFFDDIFVPKEMLPD 116
[174][TOP]
>UniRef100_A6UTP7 DNA-directed RNA polymerase n=1 Tax=Methanococcus aeolicus Nankai-3
RepID=A6UTP7_META3
Length = 195
Score = 56.2 bits (134), Expect = 2e-06
Identities = 32/116 (27%), Positives = 55/116 (47%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+ I + +++ P+ FG L+D++ LM+ EG GF++++ I IG G +
Sbjct: 1 MYKLITISDTIRVPPKMFGAPLKDSIHKILMEKYEGLMDKDFGFIMSIGDIGEIGGGKVV 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
G G P + + + P EI+E + V + G F GP+ + I DD
Sbjct: 61 YGDGAAYHPAIFDLLCYEPELYEIIEGEIVDVVEFGLFVRLGPLDGLIHISQIMDD 116
[175][TOP]
>UniRef100_C7P808 DNA-directed RNA polymerase n=1 Tax=Methanocaldococcus fervens AG86
RepID=C7P808_METFA
Length = 187
Score = 55.8 bits (133), Expect = 2e-06
Identities = 28/106 (26%), Positives = 55/106 (51%)
Frame = +1
Query: 202 MQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVTFPV 381
+++ P FG++L++ + L++ EG GF++++ ++ +G G + G G PV
Sbjct: 11 VRVPPEEFGKDLKETIKKILIEKYEGRLDKDVGFILSIVDVKEVGDGKVVHGDGSAYHPV 70
Query: 382 KYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
++ +V+ P E++E V V + G F GP+ + I DD
Sbjct: 71 VFETLVYVPEMYELVEGEVVDVVEFGSFVRLGPLDGLIHVSQIMDD 116
[176][TOP]
>UniRef100_D0AA03 RNA polymerase subunit, putative n=2 Tax=Trypanosoma brucei
RepID=D0AA03_TRYBG
Length = 190
Score = 55.5 bits (132), Expect = 3e-06
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 21/154 (13%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTC-----------------SGRHG 300
MF+ + LERN+++ P R L +L L K VEGT
Sbjct: 1 MFYKMKLERNIKVEPHLLERTLHRHLEEYLRKAVEGTPLHLSLGNALRSGLARTNQNSSA 60
Query: 301 FVVAVTGIENIG--KGLIRDGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEA 474
++AV I N +G + D G V+F VKY+ +VF+ +GE+++ +V+ V + G++ +
Sbjct: 61 VIIAVLDILNTSSLEGRVLDD-GSVSFFVKYEGLVFKLHRGEVIDVIVSSVEREGWWGDV 119
Query: 475 -GPVQIFVSNHLIPDDMEFQSGDMPN-YTTSDGS 570
G ++++S + ++ ++S M + T DG+
Sbjct: 120 MGVGRMYISRGQMGNEWVYESDGMRGIWITKDGA 153
[177][TOP]
>UniRef100_Q8ZSV9 DNA-directed RNA polymerase subunit E' (RpoE1) n=1 Tax=Pyrobaculum
aerophilum RepID=Q8ZSV9_PYRAE
Length = 191
Score = 55.1 bits (131), Expect = 4e-06
Identities = 33/109 (30%), Positives = 52/109 (47%)
Frame = +1
Query: 193 ERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIRDGTGFVT 372
E +++ P FG+ L D +S+L EG G++VAV ++ +G I G G
Sbjct: 9 EDYVRVPPTEFGKPLEDIALSQLKSRYEGKVLREVGYIVAVLNVKVGREGKIVFGDGGTY 68
Query: 373 FPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
+ + F P GE++E VV +MG GP+ F++ I DD
Sbjct: 69 HRAVFTMLAFMPLDGEVVEGVVENAREMGMLVRIGPILGFINKIHIMDD 117
[178][TOP]
>UniRef100_Q0W373 DNA-directed RNA polymerase, subunit E n=1 Tax=uncultured
methanogenic archaeon RC-I RepID=Q0W373_UNCMA
Length = 194
Score = 55.1 bits (131), Expect = 4e-06
Identities = 37/126 (29%), Positives = 59/126 (46%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M+ + L +++ P+ +L + L + +EG G +VAVT + IG+G I
Sbjct: 1 MYRKVRLVDIIRIPPQRLEEDLEKVISETLREKLEGRIDKTLGSIVAVTDVVEIGEGHIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 531
G G V + V + + ++P + EI+E V + G F GPV V I D EF
Sbjct: 61 VGDGAVYYEVTFDAIAYKPEQQEIIEGSVVEIVAFGAFIAVGPVDCLVHVSQIAD--EFM 118
Query: 532 SGDMPN 549
+ D N
Sbjct: 119 TYDEKN 124
[179][TOP]
>UniRef100_Q2FTM9 DNA-directed RNA polymerase, subunit E' n=1 Tax=Methanospirillum
hungatei JF-1 RepID=Q2FTM9_METHJ
Length = 190
Score = 54.7 bits (130), Expect = 5e-06
Identities = 30/116 (25%), Positives = 55/116 (47%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
M++ + L +++ P G +L ++ L + +EG+ G +AVT + IG+G +
Sbjct: 1 MYYRLELIDKVRVPPHRLGEDLTTVILDVLQEQLEGSIDKEIGIFIAVTKVLRIGEGEMV 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDD 519
G G V + V ++ + R EI+E +V G F GP+ + I D+
Sbjct: 61 PGDGAVYYDVDFEGLALRLSLQEIIEGIVVETTSFGAFVSLGPIDAMLHVSQISDE 116
[180][TOP]
>UniRef100_Q4SXE9 Chromosome undetermined SCAF12429, whole genome shotgun sequence.
(Fragment) n=1 Tax=Tetraodon nigroviridis
RepID=Q4SXE9_TETNG
Length = 41
Score = 54.3 bits (129), Expect = 7e-06
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGR 294
MF+HI LE + LHPRYFG NL + + KL +VEGTC+G+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGK 41
[181][TOP]
>UniRef100_A8QFZ7 RNA polymerase Rpb7, N-terminal domain containing protein n=1
Tax=Brugia malayi RepID=A8QFZ7_BRUMA
Length = 220
Score = 53.9 bits (128), Expect = 9e-06
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 9/141 (6%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF VLE +++ P FG + L+ +L + + G + + + ++G I
Sbjct: 1 MFVLAVLEDTVRIKPHQFGESFEPMLMKRLNEQLANKIVPGLGLCIIIYDLLDVGVSYIL 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMG------FFAEAGPVQIFVSNHLIP 513
G G VK++ VVFRPF EI+EA V N G FF + IF+ H +P
Sbjct: 61 PGDGSTHTKVKFRYVVFRPFIDEIIEAKVLSSNAEGLMLSVIFFED-----IFIPAHRLP 115
Query: 514 DDMEFQSGDMP---NYTTSDG 567
F+ + +Y DG
Sbjct: 116 QPSIFEEEEQIWYWDYQPEDG 136
[182][TOP]
>UniRef100_A8PDR7 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8PDR7_COPC7
Length = 227
Score = 53.9 bits (128), Expect = 9e-06
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Frame = +1
Query: 172 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 351
MF V++ + +HP++FG + + ++L K G + V + +G G +R
Sbjct: 1 MFSLAVIKDTVPIHPQHFGIPPEEAITAELNKKYANRVLHDVGLCICVFDLTEVGDGRVR 60
Query: 352 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNK------MGFFAEAGPVQIFV------ 495
G GF+ + V ++ VFRPF E++ A V ++ MGFF + I++
Sbjct: 61 YGDGFLWYKVTFRMTVFRPFVSEVVVAKVKSSDERGIRLTMGFFDDIYIPAIYLPQPSVF 120
Query: 496 -----SNHLIPDDMEFQSGDMPNYTTSD 564
+ +PD S D+ N TS+
Sbjct: 121 DRHERAYFWLPDSPLTDSNDLLNTPTSE 148