[UP]
[1][TOP]
>UniRef100_Q1SN01 High mobility group proteins HMG-I and HMG-Y; Linker histone,
N-terminal n=1 Tax=Medicago truncatula
RepID=Q1SN01_MEDTR
Length = 422
Score = 221 bits (564), Expect = 2e-56
Identities = 131/210 (62%), Positives = 147/210 (70%), Gaps = 18/210 (8%)
Frame = +3
Query: 3 RGRGRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQQPTVIPFAASILPDH 182
RGRGRPPGTFRSK++K KPKSVSN G KRRPGRPPK QS TVIPFAA+ P
Sbjct: 162 RGRGRPPGTFRSKSIK------KPKSVSN-GLKRRPGRPPKTQSHPTTVIPFAAAPAPSV 214
Query: 183 HQPTLS-SARSTRPRGRPKKYADDDALVAAPATK--------AVARPNNSSRRPLGRPKG 335
+ S RSTRPRGRPKKY+D + A AT+ V RP N S RP+GRPKG
Sbjct: 215 VSDEANVSVRSTRPRGRPKKYSDT-VVPGAGATRRGRPKKLAVVGRPKNPSGRPIGRPKG 273
Query: 336 SKAAKKLNDEDLRKKLEHFQSKIKESLDVLKPYFDKESPVTAVAAVQELEMLATLDLKAP 515
+K K +N EDLR+KLEHFQSK+KESLD+LKP FD +SP TAVAA+QELEMLATLDLKAP
Sbjct: 274 AKGKKFVN-EDLRRKLEHFQSKVKESLDILKPLFDHQSPATAVAAIQELEMLATLDLKAP 332
Query: 516 LRDETQQQQ----PQPF-----SEQEQPQP 578
LRDET Q Q PQP S+Q PQP
Sbjct: 333 LRDETLQPQQFPEPQPLQQELPSQQLHPQP 362
[2][TOP]
>UniRef100_Q93YH8 HMG I/Y like protein n=1 Tax=Glycine max RepID=Q93YH8_SOYBN
Length = 413
Score = 207 bits (526), Expect = 6e-52
Identities = 129/228 (56%), Positives = 148/228 (64%), Gaps = 38/228 (16%)
Frame = +3
Query: 9 RGRPPGTFRSKTLKSPGRPPKPKSVS--NAGFKRRPGRPPKIQSQQPTVIPFAASILPDH 182
RGRPPGT RSK K PGRPPKPKSVS ++G KRRPGRPPK +S VIPFAA + P
Sbjct: 171 RGRPPGTGRSKLPKRPGRPPKPKSVSAISSGLKRRPGRPPKAESNV-NVIPFAAPVAPGL 229
Query: 183 H--QPTLSSAR----STRPRGRPKKY---ADDDALVAA---------------------P 272
QP + +A S RPRGRPKK A AL + P
Sbjct: 230 PTVQPIVPTASVPNGSPRPRGRPKKIVAGAGAPALSSVGGAPRGRGRPRGVLPLVRPGRP 289
Query: 273 ATKAVARPNNSSRRPLGRPKGSKAAK----KLNDEDLRKKLEHFQSKIKESLDVLKPYFD 440
AV RP N +RRP+GRPKGS AA K ++DLR+KLEHFQSK+KESL LKPYF+
Sbjct: 290 QKLAVGRPKNPARRPVGRPKGSTAAAITAHKAANDDLRRKLEHFQSKVKESLGTLKPYFN 349
Query: 441 KESPVTAVAAVQELEMLATLDLKAPLRDETQQQ-QPQP-FSEQEQPQP 578
ESPVTA+AA+QELE+L+TLDLKAPLRDET QQ QPQP EQ+ PQP
Sbjct: 350 HESPVTAIAAIQELEVLSTLDLKAPLRDETHQQPQPQPQVYEQQYPQP 397
[3][TOP]
>UniRef100_A9P7V9 High mobility group family n=1 Tax=Populus trichocarpa
RepID=A9P7V9_POPTR
Length = 478
Score = 120 bits (302), Expect = 6e-26
Identities = 91/230 (39%), Positives = 125/230 (54%), Gaps = 38/230 (16%)
Frame = +3
Query: 3 RGRGRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQQPTV-----IPFAAS 167
+G+GRPP T + KSPGRP KPKS+ +A K+ PGRPPK Q + TV P A +
Sbjct: 230 KGKGRPPKTGPLGSKKSPGRPRKPKSLVDA--KKGPGRPPKNQLKPVTVPYAVAAPTATA 287
Query: 168 ILPDHHQPTLSSARSTRPRGRPKKYADDDALVAAPATKAVA-----------------RP 296
I D + + S RPRGRP+K A AL AA V +P
Sbjct: 288 IATD--AAAMFNVGSPRPRGRPRKGA---ALAAAGVGAVVVQAKRPGRPPKLPVIMKPKP 342
Query: 297 NNSSRRPLGRPKGS-------------KAAKKLNDEDLRKKLEHFQSKIKESLDVLKPYF 437
SS RP+GRP+ + +A +L+ DL++KLE FQS++K+++ VLKP+
Sbjct: 343 KKSSGRPVGRPRKNANAPWAITRASEPQAQAELHG-DLKRKLEFFQSRVKQAIGVLKPHL 401
Query: 438 DKESPVTAVAAVQELEMLATLDLKAPLRDETQ---QQQPQPFSEQEQPQP 578
+ ++AVAA+QELE LA++D+ P R+E Q Q PQP Q QP P
Sbjct: 402 -TSATISAVAAIQELEGLASMDINVPWREEPQPQIQPLPQPL-PQMQPLP 449
[4][TOP]
>UniRef100_A5BLU3 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BLU3_VITVI
Length = 355
Score = 100 bits (249), Expect = 8e-20
Identities = 83/204 (40%), Positives = 104/204 (50%), Gaps = 27/204 (13%)
Frame = +3
Query: 3 RGRGRPPGTFRSKTLKSPG-RPPKPKSVSNAGFKRRPGRPPKIQSQQPTVIPFAASILPD 179
RG GRPP KS G R P+PKS+ G KRRPGRPPK +Q VIP +P
Sbjct: 163 RGPGRPP--------KSGGVRGPRPKSLD--GPKRRPGRPPK--AQLGGVIPGG---VPR 207
Query: 180 HHQPTLSSAR---STRPRGRPKKYADDDALVAA----------PATKAVARPNNSSRRPL 320
T + S RPRGRP K A V P RP + RP+
Sbjct: 208 ERPRTAGVTKVKVSGRPRGRPPKILTVGAGVGGGLSVKRRGRPPKADGPKRPKKLTGRPV 267
Query: 321 GRPKGSKA-------------AKKLNDEDLRKKLEHFQSKIKESLDVLKPYFDKESPVTA 461
GRP+ A A+ +N EDL++KLEH Q KIK S+ VL+ F E+ V+A
Sbjct: 268 GRPRKKLATGEILPAASEQPVAEWMNYEDLKQKLEHIQGKIKLSVGVLRTQF-SENNVSA 326
Query: 462 VAAVQELEMLATLDLKAPLRDETQ 533
++A+QELE LAT+D+ APL E Q
Sbjct: 327 MSALQELEDLATMDISAPLNIEGQ 350
[5][TOP]
>UniRef100_B9T8C7 Histone h1/h5, putative n=1 Tax=Ricinus communis RepID=B9T8C7_RICCO
Length = 435
Score = 89.0 bits (219), Expect = 2e-16
Identities = 70/202 (34%), Positives = 93/202 (46%), Gaps = 42/202 (20%)
Frame = +3
Query: 3 RGRGRPP-------------GTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQQP 143
RGRGRP G R + KS GRP K KSV G K+ P R PK
Sbjct: 240 RGRGRPKKVAGGGAAAAVLGGKRRGRPPKSAGRPKKLKSVGANGVKKGPKRLPK-----S 294
Query: 144 TVIPFAASILPDHHQPTLSSARSTRPRGRPKKYADDDAL------------VAAPATKAV 287
V+P+A ++A + RPRGRPKK A A V P +A
Sbjct: 295 VVVPYATGA---------AAAVTARPRGRPKKGAAPAAAPGVGGVVGIGGAVVVPGKRAG 345
Query: 288 ARPN-------NSSRRPLGRPK-------GSKAAKKLNDE---DLRKKLEHFQSKIKESL 416
P N +RP+GRPK + A +L E DL+ K E FQSK+++++
Sbjct: 346 RPPKVVGGVVVNPKKRPVGRPKKNDNVSWAAAQASQLQSEAYGDLKMKFEFFQSKVRQAV 405
Query: 417 DVLKPYFDKESPVTAVAAVQEL 482
VL+P E+P++ VAA+QEL
Sbjct: 406 GVLRPQLTNETPISVVAAIQEL 427
[6][TOP]
>UniRef100_Q9ZRM3 HMR1 protein n=1 Tax=Antirrhinum majus RepID=Q9ZRM3_ANTMA
Length = 400
Score = 79.0 bits (193), Expect = 3e-13
Identities = 70/204 (34%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Frame = +3
Query: 3 RGRGRPPGTFRSKTLKSPGRPPKPKSVSNA------GFKRRPGRPPKIQS-------QQP 143
RGRGRPP T + + P + + A G R GRPPK + P
Sbjct: 201 RGRGRPPKTAVAPPAAAAAAVPGAPAAAVAPAAQVKGPGRPRGRPPKPINVVEGGAVAAP 260
Query: 144 TVIPFAASILPDHHQPTLSSARSTRPRGRPKKYADDDALVAAPATKAVARPNNSSRRPLG 323
+P A +LP ++ R RGRP K + P S +PLG
Sbjct: 261 VAVP-AGGVLPVAGGSVVAGVAPKR-RGRPPKAGGEAKKPRLQTVVKPKTPRKLSGKPLG 318
Query: 324 RPKGSKAA--KKLNDE-------DLRKKLEHFQSKIKESLDVLKPYFDKESPVTAVAAVQ 476
RPK + AA ++ D DL+ KLE+ QS++K + +V+KP E AV A Q
Sbjct: 319 RPKKNAAAAVSQVADTQLLVAYLDLKGKLENLQSRVKLAANVIKPCLTTED---AVNAFQ 375
Query: 477 ELEMLATLDLKAPLRDETQQQQPQ 548
ELEMLATL+ AP + QQ QPQ
Sbjct: 376 ELEMLATLNTTAPPNVQPQQPQPQ 399
[7][TOP]
>UniRef100_Q40451 DNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q40451_TOBAC
Length = 546
Score = 75.9 bits (185), Expect = 2e-12
Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 21/152 (13%)
Frame = +3
Query: 102 RRPGRPPKIQSQQP-----TVIPFAASILPDHHQPTLSSARST---------RPRGRPKK 239
+R GRPP+ T +P AA+ ++ + T + RGRP K
Sbjct: 390 KRRGRPPRSSGPPAATVGVTDVPIAAAFDTENLPNAVGGGGVTNNGALPPLGKRRGRPPK 449
Query: 240 YADDDALVAAPATKAVARPNNSSRRPLGRPKGSKAAKKLND-------EDLRKKLEHFQS 398
+ AA A V RP S +PLGRP+ + + ++D E+L+ KLEH QS
Sbjct: 450 -----SYGAAAAAPTVKRPRKLSGKPLGRPRKNVTSPAVSDPKLVVAYEELKGKLEHMQS 504
Query: 399 KIKESLDVLKPYFDKESPVTAVAAVQELEMLA 494
+IKE+ + LKP + ESP A+AA+QELE LA
Sbjct: 505 RIKEAANALKPCLNAESPAIALAALQELEELA 536
[8][TOP]
>UniRef100_Q43568 DNA-binding protein (Fragment) n=1 Tax=Nicotiana tabacum
RepID=Q43568_TOBAC
Length = 380
Score = 74.3 bits (181), Expect = 6e-12
Identities = 59/177 (33%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Frame = +3
Query: 12 GRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQQPTVIPFAASILPDHHQP 191
G PG T K GRPP+ P + T +P AA+ ++
Sbjct: 214 GGVPGAIT--TPKGRGRPPRSSG-------------PPAATVGVTDVPIAAAFDTENLPN 258
Query: 192 TLSSARST---------RPRGRPKKYADDDALVAAPATKAVARPNNSSRRPLGRPKGSKA 344
+ T + RGRP K + AA A V RP S +PLGRP+ +
Sbjct: 259 AVGGGGVTNNGALPPLGKRRGRPPK-----SYGAAAAAPTVKRPRKLSGKPLGRPRKNVT 313
Query: 345 AKKLND-------EDLRKKLEHFQSKIKESLDVLKPYFDKESPVTAVAAVQELEMLA 494
+ ++D E+L+ KLEH QS+IKE+ + LKP + ESP A+AA+QELE LA
Sbjct: 314 SPAVSDPKLVVAYEELKGKLEHMQSRIKEAANALKPCLNAESPAIALAALQELEELA 370
[9][TOP]
>UniRef100_B9I2G1 High mobility group family n=1 Tax=Populus trichocarpa
RepID=B9I2G1_POPTR
Length = 369
Score = 71.2 bits (173), Expect = 5e-11
Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Frame = +3
Query: 3 RGRGRPPGTFRSKTLKSPGRPPKPKSVSNAGFKRRPGRPPKIQSQQPTVIPFAASILPDH 182
+GRGRPP + + KSPGRP KPKS+ G K+ PGRPPK Q +P +P+A +
Sbjct: 238 KGRGRPPNSGPLGSKKSPGRPRKPKSL--VGAKKGPGRPPKNQ-LKPVTVPYAVASPTAT 294
Query: 183 HQPTLSSARSTRPRGRPKKYADDDALVAAPATKA-------------VARPNNSSRRPLG 323
+ + S +PRGRP+K A A +A +P +S RP+G
Sbjct: 295 DAAAVFNVASPKPRGRPRKGAAPTNAGAVVMVQAKPPGRPAKVPGVMKLKPKKNSGRPVG 354
Query: 324 RPK 332
RP+
Sbjct: 355 RPR 357
[10][TOP]
>UniRef100_Q9LSK7 Genomic DNA, chromosome 3, P1 clone: MBG14 n=1 Tax=Arabidopsis
thaliana RepID=Q9LSK7_ARATH
Length = 480
Score = 67.0 bits (162), Expect = 1e-09
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Frame = +3
Query: 9 RGRPPGTFRSKTLKSPGRPPKPKSVSN--------AGFKRRPGRPPKIQSQQPTVIPFAA 164
RGRPPG ++ GR KPKSVS+ A RR GRP ++ V
Sbjct: 265 RGRPPGR------RAAGRQRKPKSVSSTASVYPYVANGARRRGRPRRVVDPSSIV----- 313
Query: 165 SILPDHHQPTLSSARST-RPRGRPKKYADDDALVAAPATKAVARPNNSSRRPLGRPK--G 335
S+ P + + A R RGRP K + ++ + +P RP+GRP+ G
Sbjct: 314 SVAPVGGENVAAVAPGMKRGRGRPPK-------IGGVISRLIMKPKRGRGRPVGRPRKIG 366
Query: 336 SKAAKKLNDE-DLRKKLEHFQSKIKESLDVLKPYFDKESPVTAVAAVQELEMLATLDLKA 512
+ D +L+KK + FQ K+KE + VLK E+ V A+++LE L +
Sbjct: 367 TSVTTGTQDSGELKKKFDIFQEKVKEIVKVLKDGVTSENQ-AVVQAIKDLEALTVTETVE 425
Query: 513 P-LRDETQQQQ---PQPFSEQEQ 569
P + +E Q ++ PQ ++Q +
Sbjct: 426 PQVMEEVQPEETAAPQTEAQQTE 448
[11][TOP]
>UniRef100_A7PH49 Chromosome chr17 scaffold_16, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PH49_VITVI
Length = 284
Score = 55.5 bits (132), Expect = 3e-06
Identities = 57/170 (33%), Positives = 68/170 (40%), Gaps = 38/170 (22%)
Frame = +3
Query: 3 RGRGRPPGTFRSKTLKSPGRPPKPKSVSNA------------GFKRRPGRPPKIQSQQPT 146
RGRGRPP P P +P S S G KRRPGRPPK +Q
Sbjct: 129 RGRGRPP---------KPKIPVQPTSESVLVAVGLVDGPSLDGPKRRPGRPPK--AQLGG 177
Query: 147 VIPFAASILPDHHQPTLSSAR---STRPRGRPKKYADDDALVAA----------PATKAV 287
VIP +P T + S RPRGRP K A V P
Sbjct: 178 VIPGG---VPRERPRTAGVTKVKVSGRPRGRPPKILTVGAGVGGGLSVKRRGRPPKADGP 234
Query: 288 ARPNNSSRRPLGRPKGSKA-------------AKKLNDEDLRKKLEHFQS 398
RP + RP+GRP+ A A+ +N EDL++KLEH S
Sbjct: 235 KRPKKLTGRPVGRPRKKLATGEILPAASEQPVAEWMNYEDLKQKLEHIVS 284