BB905385 ( RCE03461 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  340 bits (871), Expect = 6e-92
 Identities = 163/193 (84%), Positives = 173/193 (89%)
 Frame = +2

Query: 2   GTGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQ 181
           GTGYHNRYSFKQ+AHAKYSHP EYA K  SKGYFYNATYENARTL+H IK YGLPFN+  
Sbjct: 222 GTGYHNRYSFKQRAHAKYSHPEEYALKSTSKGYFYNATYENARTLVHLIKTYGLPFNMQF 281

Query: 182 ADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIEL 361
           A  K++LTD  +  YI +AN FFNDYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIEL
Sbjct: 282 ACPKSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIEL 341

Query: 362 MLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDI 541
           MLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSSYDQRLPRVITDI
Sbjct: 342 MLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYDQRLPRVITDI 401

Query: 542 YYTDFLRSLIVIN 580
           YYTDFLRSLIVIN
Sbjct: 402 YYTDFLRSLIVIN 414

[2][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  232 bits (591), Expect = 2e-59
 Identities = 108/193 (55%), Positives = 138/193 (71%)
 Frame = +2

Query: 2   GTGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQ 181
           GTGY NR+S+  +AHA ++HP +Y  +  SKGY+ N T + ART++H +K++ LPFN   
Sbjct: 216 GTGYFNRFSYDAQAHASFAHPEQYHDRHTSKGYYINTTMQYARTIVHRLKQFALPFNP-- 273

Query: 182 ADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIEL 361
                   D D          FF   PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+
Sbjct: 274 -------KDFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEV 326

Query: 362 MLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDI 541
           MLTFPL + AR P CCIMYGLETIRGSN +I+  A+ + ++F++DWS YDQRLPR ITD+
Sbjct: 327 MLTFPLLVMARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDL 386

Query: 542 YYTDFLRSLIVIN 580
           YYTDFL SLI+IN
Sbjct: 387 YYTDFLESLIIIN 399

[3][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  219 bits (558), Expect = 1e-55
 Identities = 107/193 (55%), Positives = 136/193 (70%)
 Frame = +2

Query: 2   GTGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQ 181
           GTGYHNR S +   HA +SHP EY +K  SKGY+ NA  E+AR+LIH+IK YG PF    
Sbjct: 215 GTGYHNRRSHEMNIHALFSHPKEYESKRTSKGYYVNAFLESARSLIHWIKLYGNPFRHCP 274

Query: 182 ADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIEL 361
           +D    L +            FF   PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE 
Sbjct: 275 SDLAQSLRE------------FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIES 322

Query: 362 MLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDI 541
           MLTFP  + ARKP CCIMYGLETIRGSN+ +++IA DY +FF++DWS +DQRLP VI  +
Sbjct: 323 MLTFPAHVIARKPECCIMYGLETIRGSNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKL 382

Query: 542 YYTDFLRSLIVIN 580
           ++T+++  L+V+N
Sbjct: 383 FFTEYIPRLLVVN 395

[4][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  208 bits (529), Expect = 3e-52
 Identities = 106/196 (54%), Positives = 132/196 (67%), Gaps = 4/196 (2%)
 Frame = +2

Query: 5   TGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQA 184
           TGY  R+S   + HA Y+    YA +P SKGYF+N  YE +RT +H IKE+G PF     
Sbjct: 218 TGYFQRFSTFFRTHAYYARNKLYALRPTSKGYFFNTVYEFSRTWMHHIKEHGYPF----- 272

Query: 185 DDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELM 364
                +   D      +   F   + T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM
Sbjct: 273 -----VPSHDALDNARQYRIFMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELM 327

Query: 365 LTFPLTIQARKP----SCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVI 532
           ++FPL + AR P      CIMY  ETIRGSNRY++ IARD+ +FF++DWSS+DQR+PRVI
Sbjct: 328 ISFPLHVMARYPINGIKSCIMYSFETIRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVI 387

Query: 533 TDIYYTDFLRSLIVIN 580
           TDI++TDFLR LIVIN
Sbjct: 388 TDIFWTDFLRQLIVIN 403

[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  208 bits (529), Expect = 3e-52
 Identities = 104/193 (53%), Positives = 131/193 (67%)
 Frame = +2

Query: 2   GTGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQ 181
           GTGY NR+SF  + HA +S P  Y  +  SKGYF N   E AR+ IH IK +G PF+  +
Sbjct: 217 GTGYFNRHSFAARIHAMFSAPKLYERRTTSKGYFINYFLETARSTIHSIKLHGYPFDPSK 276

Query: 182 ADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIEL 361
             DK            D   SF    P +LFTRNHIS RDG LK RPVYA+DD+FI +E 
Sbjct: 277 VPDKG-----------DALRSFILKRPVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLES 325

Query: 362 MLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDI 541
            +TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y ++F++DWS +DQRLPRVITDI
Sbjct: 326 KITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDI 385

Query: 542 YYTDFLRSLIVIN 580
           ++TDFL  +IVI+
Sbjct: 386 FWTDFLERMIVIS 398

[6][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  207 bits (526), Expect = 6e-52
 Identities = 98/193 (50%), Positives = 131/193 (67%)
 Frame = +2

Query: 2   GTGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQ 181
           GTGYHNR+S+ +++ A + HP  YA KP SKGYF+NAT    R L+H IK  G PF+   
Sbjct: 245 GTGYHNRHSYFRRSFAHFCHPELYAEKPTSKGYFFNATKHENRFLVHKIKHSGYPFDFTS 304

Query: 182 ADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIEL 361
             D+             +   F   +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E 
Sbjct: 305 DSDRNS-----------KMADFLKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLEC 353

Query: 362 MLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDI 541
           ML FP T+QARKP CCIMYGLETIRGSN  ++ +A+ + +F ++DWS YDQRLP  I   
Sbjct: 354 MLAFPATVQARKPECCIMYGLETIRGSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRA 413

Query: 542 YYTDFLRSLIVIN 580
           ++  +L SL++I+
Sbjct: 414 FFFIYLPSLLIIS 426

[7][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  206 bits (523), Expect = 1e-51
 Identities = 105/193 (54%), Positives = 130/193 (67%)
 Frame = +2

Query: 2   GTGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQ 181
           GTGY NR+SF  + HA +S P  Y  +  SKGYF N   E AR+ IH IK +G PF+   
Sbjct: 217 GTGYFNRHSFAARIHAMFSAPRLYERRTTSKGYFINYFLETARSTIHNIKLHGFPFD--- 273

Query: 182 ADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIEL 361
                    S V        SF    PT+LFTRNHIS RDG LK RPVYA+DD+FI +E 
Sbjct: 274 --------PSKVPDLGSALRSFILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLES 325

Query: 362 MLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDI 541
           M+TFPL + ARK  CCIMYG ETIRGSNR I++IA  + +FF++DWS +DQRLPRVITDI
Sbjct: 326 MITFPLHVMARKIECCIMYGYETIRGSNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDI 385

Query: 542 YYTDFLRSLIVIN 580
           +++DFL  +IVI+
Sbjct: 386 FWSDFLERMIVIS 398

[8][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  142 bits (359), Expect = 1e-32
 Identities = 82/190 (43%), Positives = 113/190 (59%)
 Frame = +2

Query: 11  YHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADD 190
           Y + +S  +KAHA  SHP ++AT P  K YF N+     R+ +H IKEYG PF       
Sbjct: 182 YFHNHSRDRKAHAAKSHP-DFATGPTKKSYFINSHLFFDRSTVHNIKEYGFPFR------ 234

Query: 191 KTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLT 370
               TDS   + +   + +F   PT L  R+HISKRD  LKVRPVY    I+I IE ML 
Sbjct: 235 --PTTDSARNETL--LDLWFKKVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLF 289

Query: 371 FPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYT 550
           +PL  QARK  CCIMYGLETIRG    +E+I+  +++F  +DWS +D   P  I++ ++ 
Sbjct: 290 YPLLAQARKRDCCIMYGLETIRGGMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFK 349

Query: 551 DFLRSLIVIN 580
            +L + I+I+
Sbjct: 350 KWLPTKILID 359

[9][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  129 bits (323), Expect = 2e-28
 Identities = 75/190 (39%), Positives = 105/190 (55%)
 Frame = +2

Query: 11  YHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADD 190
           Y + +S  +K HA+ SH    AT P  K +F NA   + R+ +H IK YGLPF     + 
Sbjct: 186 YFHNHSNARKRHAQTSHAST-ATGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYEA 244

Query: 191 KTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLT 370
           + ++              +F   PT L  R+HIS     LKVRPV     IF+ IE ML 
Sbjct: 245 RNKIL----------LELWFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLF 293

Query: 371 FPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYT 550
           +PL  Q RK  C IMYGLETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y 
Sbjct: 294 YPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQ 353

Query: 551 DFLRSLIVIN 580
           D++ +LI+++
Sbjct: 354 DWIPTLILVD 363

[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  127 bits (320), Expect = 5e-28
 Identities = 75/190 (39%), Positives = 104/190 (54%)
 Frame = +2

Query: 11  YHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADD 190
           Y + +S  +K HA+ SH    AT P  K +F NA   + R+ +H IK YGLPF       
Sbjct: 186 YFHNHSNARKRHAQTSHAST-ATGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYAA 244

Query: 191 KTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLT 370
           + ++              +F   PT L  R+HIS     LKVRPV     IF+ IE ML 
Sbjct: 245 RNKILQE----------LWFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLF 293

Query: 371 FPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYT 550
           +PL  Q RK  C IMYGLETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y 
Sbjct: 294 YPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQ 353

Query: 551 DFLRSLIVIN 580
           D++ +LI+++
Sbjct: 354 DWIPTLILVD 363

[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  127 bits (319), Expect = 6e-28
 Identities = 78/192 (40%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
 Frame = +2

Query: 11  YHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPF--NIIQA 184
           Y + +S  +K HA+ SH    AT P  K +F NA   + R+ +H IK YGLPF  +  +A
Sbjct: 186 YFHNHSNARKRHAQTSHAST-ATGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYKA 244

Query: 185 DDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELM 364
            ++T L              +F   PT L  R+HIS     LKVRPV     IF+ IE M
Sbjct: 245 RNQTLL------------ELWFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECM 291

Query: 365 LTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIY 544
           L +PL  Q RK  C IMYG ETIRG    IE +A  +S F  +DWS +DQ +P  + D++
Sbjct: 292 LFYPLLAQLRKQQCSIMYGFETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMF 351

Query: 545 YTDFLRSLIVIN 580
           Y D++ +LI+I+
Sbjct: 352 YQDWIPTLILID 363

[12][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  117 bits (294), Expect = 5e-25
 Identities = 52/81 (64%), Positives = 68/81 (83%)
 Frame = +2

Query: 338 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 517
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 518 LPRVITDIYYTDFLRSLIVIN 580
           LPRVITDI++TDFL  +IVI+
Sbjct: 61  LPRVITDIFWTDFLERMIVIS 81

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score = 97.8 bits (242), Expect = 5e-19
 Identities = 57/171 (33%), Positives = 91/171 (53%)
 Frame = +2

Query: 68  EYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSF 247
           +Y+  P SKG+F+N+     R ++H IK  G P     ++ KT      +  Y    N  
Sbjct: 225 DYSKNPRSKGFFFNSLLLRCRRIVHNIKYTGWPIPHDPSESKTSFLQRML--YWTLMN-- 280

Query: 248 FNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLE 427
               PT+++ R+ ISK    LKVRPVY    +F+++E MLT  L  Q RKP  CI++  E
Sbjct: 281 ----PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYE 335

Query: 428 TIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVIN 580
           TIRG    + +I+ +++ F   D+S +DQ  P  I   ++  F+  +I ++
Sbjct: 336 TIRGGMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVD 386

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
 Frame = +2

Query: 5   TGYHNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQA 184
           T  + R  FK+  H      P+   + ++K   YN  +   R  IH IK           
Sbjct: 142 TAENYRDLFKEAHHTDLY--PKMLDRRMTKRNLYNEMFLINRKSIHIIK----------- 188

Query: 185 DDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELM 364
           + +T        KY + A           F R H+ + D P KVR V+      ++ ELM
Sbjct: 189 NGRTTNDHGHDLKYWNTA-----------FARQHLVEDDDPDKVRLVFGAPSTLLMAELM 237

Query: 365 LTFPLTIQ--ARKPSCCIMYGLETIRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPR 526
             +PL +   AR P   +++G ET+ G    +   A D    YST  +LDWS +D+    
Sbjct: 238 FIWPLQVSLLARGPQSPMLWGYETLTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARH 297

Query: 527 -VITDIY 544
            VI DI+
Sbjct: 298 TVIRDIH 304