[UP]
BLASTX 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BB905326 RCE03393
(577 letters)
Database: uniref100
9,526,577 sequences; 3,332,566,763 total letters
Searching..................................................done
significant alignments:[graphical|details]
UniRef100_A7NZG2 Chromosome chr6 scaffold_3, whole genome shotgu... 347 3e-94
UniRef100_B9N7M5 Predicted protein n=1 Tax=Populus trichocarpa R... 347 5e-94
UniRef100_Q9ZVN9 T7A14.8 protein n=1 Tax=Arabidopsis thaliana Re... 332 1e-89
UniRef100_B9SK47 Btf, putative n=1 Tax=Ricinus communis RepID=B9... 330 6e-89
UniRef100_C5YBY0 Putative uncharacterized protein Sb06g022140 n=... 320 6e-86
UniRef100_Q7XM94 OSJNBa0043L24.23 protein n=2 Tax=Oryza sativa R... 318 2e-85
UniRef100_B4G0C7 Putative uncharacterized protein n=1 Tax=Zea ma... 315 2e-84
UniRef100_A9SFF5 Predicted protein n=1 Tax=Physcomitrella patens... 288 3e-76
UniRef100_UPI0000DD9180 Os04g0508900 n=1 Tax=Oryza sativa Japoni... 248 2e-64
UniRef100_B9FG29 Putative uncharacterized protein n=2 Tax=Oryza ... 248 2e-64
UniRef100_A8IDI5 Transcription factor TFIIH, 44 kDa subunit n=1 ... 228 2e-58
UniRef100_Q0WLZ8 Putative transcription factor n=1 Tax=Arabidops... 222 2e-56
UniRef100_B0D885 Predicted protein (Fragment) n=1 Tax=Laccaria b... 207 6e-52
UniRef100_UPI000051A964 PREDICTED: similar to Ssl1 CG11115-PA is... 204 4e-51
UniRef100_C3YN18 Putative uncharacterized protein n=1 Tax=Branch... 200 6e-50
UniRef100_UPI0000E482AE PREDICTED: hypothetical protein n=1 Tax=... 200 7e-50
UniRef100_A5B9J1 Putative uncharacterized protein n=1 Tax=Vitis ... 199 1e-49
UniRef100_UPI00019269FF PREDICTED: similar to predicted protein,... 198 2e-49
UniRef100_UPI00015B5144 PREDICTED: similar to btf n=1 Tax=Nasoni... 197 4e-49
UniRef100_C1N2T6 Predicted protein n=1 Tax=Micromonas pusilla CC... 195 2e-48
UniRef100_UPI00005A020A PREDICTED: similar to TFIIH basal transc... 194 3e-48
UniRef100_UPI000155431D PREDICTED: similar to General transcript... 194 4e-48
UniRef100_UPI000155F776 PREDICTED: similar to General transcript... 194 5e-48
UniRef100_A4RYU4 Predicted protein n=1 Tax=Ostreococcus lucimari... 192 1e-47
UniRef100_Q2TBV5 General transcription factor IIH subunit 2 n=1 ... 192 2e-47
UniRef100_Q86KZ2 General transcription factor IIH subunit 2 n=1 ... 191 3e-47
UniRef100_UPI0000E208A5 PREDICTED: general transcription factor ... 191 5e-47
UniRef100_UPI0000E208A4 PREDICTED: general transcription factor ... 191 5e-47
UniRef100_UPI0000E208A3 PREDICTED: general transcription factor ... 191 5e-47
UniRef100_UPI0000E208A2 PREDICTED: general transcription factor ... 191 5e-47
UniRef100_UPI0000D9B4BA PREDICTED: general transcription factor ... 191 5e-47
UniRef100_Q13888 General transcription factor IIH subunit 2 n=1 ... 191 5e-47
UniRef100_Q6P1K8 General transcription factor IIH subunit 2-like... 191 5e-47
UniRef100_UPI00015DEAE9 general transcription factor II H, polyp... 190 6e-47
UniRef100_Q91YN8 Gtf2h2 protein n=1 Tax=Mus musculus RepID=Q91YN... 190 6e-47
UniRef100_Q9JIB4 General transcription factor IIH subunit 2 n=1 ... 190 6e-47
UniRef100_B0WAT8 TFIIH basal transcription factor complex p44 su... 189 1e-46
UniRef100_Q173R5 Btf n=1 Tax=Aedes aegypti RepID=Q173R5_AEDAE 189 1e-46
UniRef100_UPI0000480765 general transcription factor IIH, polype... 189 2e-46
UniRef100_B7ZW82 GTF2H2C protein n=1 Tax=Homo sapiens RepID=B7ZW... 189 2e-46
UniRef100_A0JN27 General transcription factor IIH subunit 2 n=1 ... 188 2e-46
UniRef100_UPI0000E52B7F PREDICTED: similar to basic transcripion... 188 3e-46
UniRef100_UPI0000D8F246 PREDICTED: similar to basic transcripion... 188 3e-46
UniRef100_UPI00005871E6 PREDICTED: similar to basic transcripion... 187 5e-46
UniRef100_Q7PPS5 AGAP010559-PA n=1 Tax=Anopheles gambiae RepID=Q... 187 7e-46
UniRef100_Q1RPX7 Zinc finger protein n=1 Tax=Ciona intestinalis ... 187 7e-46
UniRef100_B3RZ73 Putative uncharacterized protein n=1 Tax=Tricho... 187 7e-46
UniRef100_Q7TPV0 General transcription factor II H, polypeptide ... 186 9e-46
UniRef100_Q017B7 Basic transcription factor 2, 44kD subunit-rela... 186 1e-45
UniRef100_UPI000186D2CB TFIIH basal transcription factor complex... 184 4e-45
UniRef100_UPI000187CCBB hypothetical protein MPER_01834 n=1 Tax=... 184 6e-45
UniRef100_C4JML7 Suppressor of stem-loop protein 1 n=1 Tax=Uncin... 183 7e-45
UniRef100_B5DGR9 General transcription factor IIE, polypeptide 2... 182 1e-44
UniRef100_Q7ZVV4 General transcription factor IIH, polypeptide 2... 182 2e-44
UniRef100_Q5XGG8 General transcription factor IIH polypeptide 4,... 182 2e-44
UniRef100_B4J3S1 GH16776 n=1 Tax=Drosophila grimshawi RepID=B4J3... 182 2e-44
UniRef100_Q6GR42 MGC81060 protein n=1 Tax=Xenopus laevis RepID=Q... 181 4e-44
UniRef100_B4KYL1 GI13436 n=1 Tax=Drosophila mojavensis RepID=B4K... 181 4e-44
UniRef100_UPI0000612989 UPI0000612989 related cluster n=1 Tax=Ga... 180 6e-44
UniRef100_C5P7V1 TFIIH basal transcription factor complex p47 su... 180 6e-44
UniRef100_B2B1C8 Predicted CDS Pa_3_8890 n=1 Tax=Podospora anser... 180 6e-44
UniRef100_B4LDP4 GJ11798 n=1 Tax=Drosophila virilis RepID=B4LDP4... 180 8e-44
UniRef100_Q2U9W3 RNA polymerase II transcription initiation/nucl... 180 8e-44
UniRef100_O74995 TFIIH basal transcription factor complex p47 su... 180 8e-44
UniRef100_A7S1M7 Predicted protein n=1 Tax=Nematostella vectensi... 179 2e-43
UniRef100_B6HPX4 Pc22g11160 protein n=1 Tax=Penicillium chrysoge... 179 2e-43
UniRef100_UPI00016E0918 UPI00016E0918 related cluster n=1 Tax=Ta... 178 2e-43
UniRef100_B6QHU7 RNA polymerase TFIIH complex subunit Ssl1, puta... 178 2e-43
UniRef100_A1C4Q2 Transcription factor and DNA repair complex, co... 178 2e-43
UniRef100_Q4T3D5 Chromosome undetermined SCAF10097, whole genome... 178 3e-43
UniRef100_C1C2X0 General transcription factor IIH subunit 2 n=1 ... 178 3e-43
UniRef100_A2QUU4 Contig An09c0220, complete genome n=1 Tax=Asper... 178 3e-43
UniRef100_Q9VNP8 Ssl1 n=1 Tax=Drosophila melanogaster RepID=Q9VN... 177 4e-43
UniRef100_B4QLB8 GD15058 n=1 Tax=Drosophila simulans RepID=B4QLB... 177 4e-43
UniRef100_B4PIR4 GE22646 n=1 Tax=Drosophila yakuba RepID=B4PIR4_... 177 4e-43
UniRef100_C8V3Z3 Component of the core form of RNA polymerase tr... 177 4e-43
UniRef100_Q4P3N2 Putative uncharacterized protein n=1 Tax=Ustila... 177 7e-43
UniRef100_C7YPR2 Predicted protein n=1 Tax=Nectria haematococca ... 177 7e-43
UniRef100_B4IB56 GM22477 n=1 Tax=Drosophila sechellia RepID=B4IB... 176 9e-43
UniRef100_B3NEG9 GG16285 n=1 Tax=Drosophila erecta RepID=B3NEG9_... 176 9e-43
UniRef100_C5FIA5 Suppressor of stem-loop protein 1 n=1 Tax=Micro... 176 1e-42
UniRef100_C1DZ00 Predicted protein n=1 Tax=Micromonas sp. RCC299... 176 2e-42
UniRef100_Q2M0P7 GA10767 n=1 Tax=Drosophila pseudoobscura pseudo... 175 3e-42
UniRef100_B4GRB7 GL24973 n=1 Tax=Drosophila persimilis RepID=B4G... 175 3e-42
UniRef100_B6JWI3 Transcription factor TFIIH complex subunit Ssl1... 175 3e-42
UniRef100_Q872T8 Related to transcription factor TFIIH chain p47... 174 3e-42
UniRef100_A4DA11 RNA polymerase TFIIH complex subunit Ssl1, puta... 174 3e-42
UniRef100_B3MBA0 GF11005 n=1 Tax=Drosophila ananassae RepID=B3MB... 173 1e-41
UniRef100_A7TJ61 Putative uncharacterized protein n=1 Tax=Vander... 173 1e-41
UniRef100_A4R2B9 Putative uncharacterized protein n=1 Tax=Magnap... 173 1e-41
UniRef100_B4N3K4 GK12882 n=1 Tax=Drosophila willistoni RepID=B4N... 172 1e-41
UniRef100_A7A0R0 Transcription initiation factor TFIIH subunit n... 171 3e-41
UniRef100_A7EQL3 Putative uncharacterized protein n=1 Tax=Sclero... 171 5e-41
UniRef100_C5DCG2 KLTH0B02794p n=1 Tax=Lachancea thermotolerans C... 170 6e-41
UniRef100_Q6CNV5 KLLA0E09615p n=1 Tax=Kluyveromyces lactis RepID... 169 1e-40
UniRef100_Q759D9 ADR338Cp n=1 Tax=Eremothecium gossypii RepID=Q7... 169 2e-40
UniRef100_Q6C7M6 YALI0D26862p n=1 Tax=Yarrowia lipolytica RepID=... 168 2e-40
UniRef100_Q6B237 YLR005W n=1 Tax=Saccharomyces cerevisiae RepID=... 168 2e-40
UniRef100_B5VMU6 YLR005Wp-like protein n=1 Tax=Saccharomyces cer... 168 2e-40
UniRef100_Q04673 Suppressor of stem-loop protein 1 n=4 Tax=Sacch... 168 2e-40
UniRef100_UPI000023DE85 hypothetical protein FG06002.1 n=1 Tax=G... 167 7e-40
UniRef100_A8PUU2 Putative uncharacterized protein n=1 Tax=Malass... 166 9e-40
UniRef100_P34567 General transcription factor IIH subunit 2 n=1 ... 166 1e-39
UniRef100_C4Q4F1 Btf, putative n=1 Tax=Schistosoma mansoni RepID... 166 2e-39
UniRef100_Q6FTA5 Similar to uniprot|Q04673 Saccharomyces cerevis... 165 2e-39
UniRef100_C4QXV7 Component of the core form of RNA polymerase tr... 164 3e-39
UniRef100_C6HGL3 Transcription factor TFIIH complex subunit Ssl1... 163 1e-38
UniRef100_A8X9W6 Putative uncharacterized protein n=1 Tax=Caenor... 162 1e-38
UniRef100_C5GS24 RNA polymerase TFIIH complex subunit Ssl1 n=1 T... 162 1e-38
UniRef100_B2W2F2 TFIIH basal transcription factor complex p44 su... 162 2e-38
UniRef100_A8N5G6 Putative uncharacterized protein n=1 Tax=Coprin... 162 2e-38
UniRef100_A8PMZ9 TFIIH basal transcription factor complex p44 su... 160 5e-38
UniRef100_A6R9E3 Suppressor of stem-loop protein 1 n=1 Tax=Ajell... 160 5e-38
UniRef100_C1GGV8 Suppressor of stem-loop protein n=1 Tax=Paracoc... 160 9e-38
UniRef100_C0SH20 TFIIH basal transcription factor complex p44 su... 160 9e-38
UniRef100_UPI0001791FC5 PREDICTED: similar to General transcript... 159 2e-37
UniRef100_C4WY63 ACYPI003683 protein n=1 Tax=Acyrthosiphon pisum... 159 2e-37
UniRef100_C1HE13 Suppressor of stem-loop protein n=1 Tax=Paracoc... 159 2e-37
UniRef100_C5DQF9 ZYRO0A11176p n=1 Tax=Zygosaccharomyces rouxii C... 158 3e-37
UniRef100_B8C051 Predicted protein (Fragment) n=1 Tax=Thalassios... 155 3e-36
UniRef100_B7FW75 Suppressor of stem-loop protein 1 n=1 Tax=Phaeo... 155 3e-36
UniRef100_A7AVF2 Transcriptional factor 2 subunit n=1 Tax=Babesi... 153 1e-35
UniRef100_B9PYF6 Putative uncharacterized protein n=1 Tax=Toxopl... 152 1e-35
UniRef100_B6KQY8 General transcription factor IIH polypeptide 2,... 152 1e-35
UniRef100_C0P0D6 Transcription factor TFIIH complex subunit Ssl1... 149 2e-34
UniRef100_Q5KBR6 RNA polymerase II transcription factor, putativ... 148 3e-34
UniRef100_Q5KBR5 RNA polymerase II transcription factor, putativ... 148 3e-34
UniRef100_Q0JBU9 Os04g0508900 protein (Fragment) n=1 Tax=Oryza s... 146 1e-33
UniRef100_C9SCT7 Suppressor of stem-loop protein n=1 Tax=Vertici... 145 3e-33
UniRef100_A3LN57 Predicted protein n=1 Tax=Pichia stipitis RepID... 139 1e-31
UniRef100_A5DNU1 Putative uncharacterized protein n=1 Tax=Pichia... 139 2e-31
UniRef100_UPI000151B18E hypothetical protein PGUG_04942 n=1 Tax=... 138 3e-31
UniRef100_C4Y542 Putative uncharacterized protein n=1 Tax=Clavis... 137 8e-31
UniRef100_UPI000069EF63 TFIIH basal transcription factor complex... 135 2e-30
UniRef100_B0WAT7 Btf n=1 Tax=Culex quinquefasciatus RepID=B0WAT7... 133 9e-30
UniRef100_B9WAJ6 Suppressor of stem-loop protein 1, putative (Ge... 132 3e-29
UniRef100_Q5ALX0 Putative uncharacterized protein SSL1 n=1 Tax=C... 131 3e-29
UniRef100_C4YJA8 Suppressor of stem-loop protein 1 n=1 Tax=Candi... 131 3e-29
UniRef100_Q6BZG1 DEHA2A01606p n=1 Tax=Debaryomyces hansenii RepI... 129 1e-28
UniRef100_UPI00003BD070 hypothetical protein DEHA0A02035g n=1 Ta... 129 2e-28
UniRef100_B0E6X4 TFIIH basal transcription factor complex p44 su... 129 2e-28
UniRef100_C4LV67 TFIIH basal transcription factor complex subuni... 128 4e-28
UniRef100_UPI00017587F0 PREDICTED: similar to btf n=1 Tax=Tribol... 127 5e-28
UniRef100_Q2GVU6 Putative uncharacterized protein n=1 Tax=Chaeto... 127 8e-28
UniRef100_C5M5W0 Suppressor of stem-loop protein 1 n=1 Tax=Candi... 125 2e-27
UniRef100_A5DUU6 Suppressor of stem-loop protein 1 n=1 Tax=Lodde... 125 2e-27
UniRef100_C5JZ55 RNA polymerase TFIIH complex subunit Ssl1 n=1 T... 124 4e-27
UniRef100_UPI00006CBD72 transcription factor ssl1 family protein... 124 7e-27
UniRef100_Q4MZN6 Putative uncharacterized protein n=1 Tax=Theile... 119 2e-25
UniRef100_Q3L0J8 Ssl1 (Fragment) n=1 Tax=Drosophila yakuba RepID... 116 1e-24
UniRef100_C4V6H4 Putative uncharacterized protein n=1 Tax=Nosema... 116 1e-24
UniRef100_Q3L0J4 Ssl1 (Fragment) n=1 Tax=Drosophila santomea Rep... 115 2e-24
UniRef100_C5KZV7 Putative uncharacterized protein n=1 Tax=Perkin... 114 5e-24
UniRef100_Q8IEG6 TFIIH basal transcription factor subunit n=1 Ta... 104 4e-21
UniRef100_Q8SVX5 Similarity to SUPPRESSOR OF STEM LOOP PROTEIN 1... 104 4e-21
UniRef100_A5JZD8 Transcription factor, putative n=1 Tax=Plasmodi... 104 6e-21
UniRef100_B9NGH3 Predicted protein n=1 Tax=Populus trichocarpa R... 103 7e-21
UniRef100_Q5CUE9 Transcription factor TFIIH with a vWA domain n=... 103 7e-21
UniRef100_Q4YW75 Putative uncharacterized protein n=1 Tax=Plasmo... 103 7e-21
UniRef100_B6AG17 Suppressor of stem-loop protein 1, putative n=1... 103 7e-21
UniRef100_B3LBW4 Ssl1-like protein, putative n=1 Tax=Plasmodium ... 103 7e-21
UniRef100_Q0V439 Putative uncharacterized protein n=1 Tax=Phaeos... 103 1e-20
UniRef100_Q7R9E1 W43325 comes from this gene., putative n=1 Tax=... 102 2e-20
UniRef100_Q5CGN4 Putative uncharacterized protein n=1 Tax=Crypto... 101 4e-20
UniRef100_Q1DTP2 Putative uncharacterized protein n=1 Tax=Coccid... 96 3e-18
UniRef100_B8MIL9 RNA polymerase TFIIH complex subunit Ssl1, puta... 96 3e-18
UniRef100_Q4Y1Z2 Putative uncharacterized protein n=1 Tax=Plasmo... 94 8e-18
UniRef100_A2ENQ3 Transcription factor ssl1 family protein n=1 Ta... 90 1e-16
UniRef100_C5KJR9 TFIIH basal transcription factor complex p44 su... 89 3e-16
UniRef100_C6T7E1 Putative uncharacterized protein n=1 Tax=Glycin... 80 1e-13
UniRef100_B7XHT8 Transcription/repair factor TFIIH subunit n=1 T... 78 4e-13
UniRef100_B7XIR3 Transcription/repair factor TFIIH subunit n=1 T... 77 7e-13
UniRef100_Q5DH11 SJCHGC07056 protein n=1 Tax=Schistosoma japonic... 77 1e-12
UniRef100_B7PCD8 Bcl-2-associated transcription factor (BTF), pu... 72 2e-11
UniRef100_Q5BW88 SJCHGC09266 protein (Fragment) n=1 Tax=Schistos... 72 4e-11
UniRef100_A0DN89 Chromosome undetermined scaffold_57, whole geno... 69 2e-10
UniRef100_A0EIQ3 Chromosome undetermined scaffold_99, whole geno... 69 3e-10
UniRef100_Q4XHM1 Putative uncharacterized protein (Fragment) n=1... 68 6e-10
UniRef100_Q4DY61 DNA repair and transcription factor protein, pu... 64 6e-09
UniRef100_A5C6U0 Putative uncharacterized protein n=1 Tax=Vitis ... 64 1e-08
UniRef100_A9CRF7 Transcription-repair factor TFIIH subunit n=1 T... 61 5e-08
UniRef100_Q1JTF0 Ssl1-like protein n=1 Tax=Toxoplasma gondii RH ... 61 7e-08
UniRef100_C6LX81 TFIIH P44 n=1 Tax=Giardia intestinalis ATCC 505... 61 7e-08
UniRef100_Q5B597 Putative uncharacterized protein n=1 Tax=Emeric... 57 1e-06