[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 223 bits (567), Expect = 1e-56
Identities = 107/194 (55%), Positives = 138/194 (71%), Gaps = 3/194 (1%)
Frame = +1
Query: 4 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 183
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 205 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 264
Query: 184 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 363
+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 265 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 324
Query: 364 IRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNF 534
I+I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+
Sbjct: 325 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 384
Query: 535 VNAFAIMCATTGMH 576
VNAFAIMCATTGMH
Sbjct: 385 VNAFAIMCATTGMH 398
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 223 bits (567), Expect = 1e-56
Identities = 107/194 (55%), Positives = 138/194 (71%), Gaps = 3/194 (1%)
Frame = +1
Query: 4 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 183
PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T
Sbjct: 1015 PLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTIT 1074
Query: 184 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 363
+ Q QMPH D L+IQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+Y
Sbjct: 1075 LEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYY 1134
Query: 364 IRIHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNF 534
I+I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+
Sbjct: 1135 IQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNY 1194
Query: 535 VNAFAIMCATTGMH 576
VNAFAIMCATTGMH
Sbjct: 1195 VNAFAIMCATTGMH 1208
[3][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 215 bits (548), Expect = 2e-54
Identities = 105/192 (54%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Frame = +1
Query: 4 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 183
PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VHSTSS ++ KLR+ +W +
Sbjct: 204 PLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVHSTSSCLLTSKLRVFLWEHSQP 263
Query: 184 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 363
+ + H + G IQ+ +TANFG GA+FW++PLS+P AP+ VE+KFEFY
Sbjct: 264 QCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFY 322
Query: 364 IRIHGIDSQPDLCKQINYKQRFGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVDCTNFVN 540
IRI GID PDLC+QINYKQRFGWFM+ P + T E +PSR+ N+ +K C NF N
Sbjct: 323 IRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTN 382
Query: 541 AFAIMCATTGMH 576
AFAIMCATTGMH
Sbjct: 383 AFAIMCATTGMH 394
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 214 bits (546), Expect = 3e-54
Identities = 106/193 (54%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Frame = +1
Query: 4 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 183
P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P
Sbjct: 204 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 263
Query: 184 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 363
Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y
Sbjct: 264 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 323
Query: 364 IRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFV 537
I+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TNFV
Sbjct: 324 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 383
Query: 538 NAFAIMCATTGMH 576
NA AI+CATTGMH
Sbjct: 384 NALAILCATTGMH 396
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 214 bits (546), Expect = 3e-54
Identities = 106/193 (54%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Frame = +1
Query: 4 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 183
P++LA K +TSG YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P
Sbjct: 1041 PVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPE 1100
Query: 184 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 363
Q QMPH D+ L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+Y
Sbjct: 1101 TDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYY 1160
Query: 364 IRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFV 537
I+I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TNFV
Sbjct: 1161 IQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFV 1220
Query: 538 NAFAIMCATTGMH 576
NA AI+CATTGMH
Sbjct: 1221 NALAILCATTGMH 1233
[6][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 214 bits (545), Expect = 4e-54
Identities = 104/191 (54%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Frame = +1
Query: 4 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 183
PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG T
Sbjct: 29 PLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGAQIT 88
Query: 184 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 363
+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+Y
Sbjct: 89 MIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYY 148
Query: 364 IRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVN 540
I+I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K + N VN
Sbjct: 149 IQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVN 208
Query: 541 AFAIMCATTGM 573
AF+IMCATTGM
Sbjct: 209 AFSIMCATTGM 219
[7][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 214 bits (545), Expect = 4e-54
Identities = 104/191 (54%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Frame = +1
Query: 4 PLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPT 183
PL+ A K V+ S +YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG T
Sbjct: 1049 PLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGAQIT 1108
Query: 184 IAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFY 363
+ Q QMPH D+ G + L+IQSPFY+TAN G A FWV P+SSPMAPE +ES E+Y
Sbjct: 1109 MIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYY 1168
Query: 364 IRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVN 540
I+I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K + N VN
Sbjct: 1169 IQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVN 1228
Query: 541 AFAIMCATTGM 573
AF+IMCATTGM
Sbjct: 1229 AFSIMCATTGM 1239
[8][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 213 bits (543), Expect = 7e-54
Identities = 98/194 (50%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 LPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTP 180
+P++LA + + + + YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT P
Sbjct: 1036 VPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGTIP 1095
Query: 181 TIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 360
T + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F++
Sbjct: 1096 TTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQY 1155
Query: 361 YIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNF 534
YI IHGI+++ LC++INY Q F WFM++ T + +P+R++NL K V TNF
Sbjct: 1156 YIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNF 1215
Query: 535 VNAFAIMCATTGMH 576
VNA AIMCATTGMH
Sbjct: 1216 VNALAIMCATTGMH 1229
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 211 bits (538), Expect = 2e-53
Identities = 100/194 (51%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 LPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTP 180
+P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT P
Sbjct: 203 VPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGTVP 262
Query: 181 TIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 360
T + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F++
Sbjct: 263 TTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQY 322
Query: 361 YIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNF 534
YI IHGI + +LC++INY Q F WFM++ T + +P+R++NL K V TNF
Sbjct: 323 YIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNF 382
Query: 535 VNAFAIMCATTGMH 576
VNA AIMCATTGMH
Sbjct: 383 VNALAIMCATTGMH 396
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 211 bits (538), Expect = 2e-53
Identities = 100/194 (51%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Frame = +1
Query: 1 LPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTP 180
+P++LA + + + + YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT P
Sbjct: 1035 VPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGTVP 1094
Query: 181 TIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 360
T + Q+PH D+ L+IQSPF++TANFG +G F++ L +P+APE +E+ F++
Sbjct: 1095 TTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQY 1154
Query: 361 YIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNF 534
YI IHGI + +LC++INY Q F WFM++ T + +P+R++NL K V TNF
Sbjct: 1155 YIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNF 1214
Query: 535 VNAFAIMCATTGMH 576
VNA AIMCATTGMH
Sbjct: 1215 VNALAIMCATTGMH 1228
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 113 bits (283), Expect = 9e-24
Identities = 60/192 (31%), Positives = 100/192 (52%)
Frame = +1
Query: 1 LPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTP 180
+PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ KL I +W
Sbjct: 216 IPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSKEQ 274
Query: 181 TIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 360
+ H D G + +L I+ FY+++ +G GA + L SPM+P +++ F+
Sbjct: 275 HVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDM 334
Query: 361 YIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVN 540
+I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T + N
Sbjct: 335 VFKIKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTN 394
Query: 541 AFAIMCATTGMH 576
AF MC T+ MH
Sbjct: 395 AFLQMCQTSTMH 406
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 112 bits (279), Expect = 3e-23
Identities = 61/192 (31%), Positives = 100/192 (52%)
Frame = +1
Query: 1 LPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTP 180
+PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 204 IPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSKEQ 262
Query: 181 TIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 360
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F+
Sbjct: 263 HIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDM 322
Query: 361 YIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVN 540
+I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T + N
Sbjct: 323 IFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTN 382
Query: 541 AFAIMCATTGMH 576
AF MC T+ MH
Sbjct: 383 AFLQMCQTSTMH 394
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 112 bits (279), Expect = 3e-23
Identities = 61/192 (31%), Positives = 100/192 (52%)
Frame = +1
Query: 1 LPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTP 180
+PL+ A KS + YS+A L+HF G+GG + V+ S+ V+ + RI +W
Sbjct: 887 IPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSKEQ 945
Query: 181 TIAQTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEF 360
I H D G + +L I+ FY+++ +G GA V L SPM+P +++ F+
Sbjct: 946 HIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDM 1005
Query: 361 YIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVN 540
+I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T + N
Sbjct: 1006 IFKIRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTN 1065
Query: 541 AFAIMCATTGMH 576
AF MC T+ MH
Sbjct: 1066 AFLQMCQTSTMH 1077
[14][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 65.1 bits (157), Expect = 4e-09
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 6/180 (3%)
Frame = +1
Query: 55 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 228
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 229 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 396
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 397 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 576
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
[15][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 64.7 bits (156), Expect = 5e-09
Identities = 49/179 (27%), Positives = 76/179 (42%), Gaps = 6/179 (3%)
Frame = +1
Query: 58 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 231
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 232 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDL 399
E+ I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPM 350
Query: 400 CKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 576
F +KP+ +P + + K T N + + A TG H
Sbjct: 351 FSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
[16][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 64.3 bits (155), Expect = 6e-09
Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Frame = +1
Query: 55 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 228
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 229 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLC 402
G E+ I++ +S A + ++PLS P+AP+ +EF + I+ DSQ
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-P 348
Query: 403 KQINYKQRFGWFM---VKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGM 573
+ + + WF +KP+ +P + + K T N + + A TG
Sbjct: 349 PMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGW 408
Query: 574 H 576
H
Sbjct: 409 H 409
[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 63.2 bits (152), Expect = 1e-08
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 6/180 (3%)
Frame = +1
Query: 55 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 228
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 229 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 396
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 347
Query: 397 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 576
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 348 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 407
[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 63.2 bits (152), Expect = 1e-08
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 6/180 (3%)
Frame = +1
Query: 55 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 228
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 229 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 396
G E+ I++ +S A + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 935
Query: 397 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 576
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 936 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 995
[19][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 62.8 bits (151), Expect = 2e-08
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 5/183 (2%)
Frame = +1
Query: 37 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 207
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 208 HCDIVEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 384
C I GG +RIQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 385 SQPD-LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCA 561
+ D + I F W + FQ +P+R+S+LV+ G T NA A +
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLVLPGQTVTMRRNALANLIR 434
Query: 562 TTG 570
+ G
Sbjct: 435 SCG 437
[20][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 62.4 bits (150), Expect = 2e-08
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 6/180 (3%)
Frame = +1
Query: 55 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 228
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 229 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PD 396
G E+ ++ +S++ + ++PLS P+AP+ +EF + I DSQ P
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPP 349
Query: 397 LCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 576
+ F +KP+ +P + + K T N + + A TG H
Sbjct: 350 MFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWH 409
[21][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 56.6 bits (135), Expect = 1e-06
Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 11/188 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+Y +LS++LG+GG V+ VH S LR++ W G T Q + P C I
Sbjct: 827 KVYNYNNTLLSYYLGIGGVVKGKVHICSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYI 886
Query: 220 VEGGSGELRIQSPFYST---------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 372
E G+ E+ I+SP++ T A+ + F+ I S P+AP +K ++I
Sbjct: 887 DEDGNFEIEIRSPYHRTPLRLLDAQAASSFTSTLNFYAI--SGPIAPSGETAKMPVVVQI 944
Query: 373 HGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 552
+ I + PDL F W D E + + SR ++ N FA
Sbjct: 945 NEI-ALPDLSVPSFPNDYFLWVDFSAFTVDTE-EYVIGSRFFDISSTTSTVALGDNPFAH 1002
Query: 553 MCATTGMH 576
M A G+H
Sbjct: 1003 MIACHGLH 1010
[22][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 56.6 bits (135), Expect = 1e-06
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+Y +LS++LGVGG V+ VH S LR++ W G T Q + P C I
Sbjct: 793 KVYNYNNTLLSYYLGVGGVVKGKVHICSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYI 852
Query: 220 VEGGSGELRIQSPFYST---------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 372
E G+ E+ I+SP++ T A+ + F+ I S P+AP +K ++I
Sbjct: 853 DEDGNFEIEIRSPYHRTPLRLLDGQAASSFTSTLNFYAI--SGPIAPSGETAKMPVVVQI 910
Query: 373 HGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 552
I + PDL F W D E + + SR ++ N FA
Sbjct: 911 DEI-ALPDLSVPTFPNDYFLWVDFSAFTVDTE-EYVIGSRFFDISSTTSTVALGDNPFAH 968
Query: 553 MCATTGMH 576
M A G+H
Sbjct: 969 MIACHGLH 976
[23][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
Length = 1083
Score = 55.8 bits (133), Expect = 2e-06
Identities = 62/211 (29%), Positives = 91/211 (43%), Gaps = 19/211 (9%)
Frame = +1
Query: 1 LPLTLAEKSVT-------TSGI-ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLR 156
L T A KSV+ GI + Y+Y +LS++LG+GG V+ VH S LR
Sbjct: 769 LSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLGIGGVVKGRVHICSPCTYGIVLR 828
Query: 157 III-W-GTTPTIAQTGQMPHCDIVEGGSGELRIQSPFYST---------ANFGSEGAQFW 303
++ W G T Q + P C I E G+ E+ I+SP++ T A+ + F+
Sbjct: 829 VVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAASSFTSTLNFY 888
Query: 304 VIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFV 483
I S P+AP +K ++I I + PDL F W D E + +
Sbjct: 889 AI--SGPIAPSGETAKMPVVVQIDEI-ALPDLSVPTFPNDYFLWVDFSAFTVDVE-EYVI 944
Query: 484 PSRVSNLVIKGVDCTNFVNAFAIMCATTGMH 576
SR ++ N FA M A G+H
Sbjct: 945 GSRFFDISSTTSTVALGDNPFAHMIACHGLH 975
[24][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 55.1 bits (131), Expect = 4e-06
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 11/188 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+Y +LS++LG+GG V+ VH S LR++ W G T Q + P C I
Sbjct: 230 KVYNYNNTLLSYYLGIGGVVKGKVHICSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYI 289
Query: 220 VEGGSGELRIQSPFYST---------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 372
E G+ E+ I+SP++ T A+ + F+ I S P+AP ++ ++I
Sbjct: 290 DEDGNFEIEIRSPYHRTPLRLLDAQSASSFTSTLNFYAI--SGPIAPSGETARMPVVVQI 347
Query: 373 HGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 552
+ I + PDL F W D E + + SR ++ N FA
Sbjct: 348 NEI-ALPDLSVPSFPNDYFLWVDFSSFTVDVE-EYVIGSRFFDISSTTSTVALGDNPFAH 405
Query: 553 MCATTGMH 576
M A G+H
Sbjct: 406 MIACHGLH 413
[25][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 54.7 bits (130), Expect = 5e-06
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+Y +LS++LG+GG V+ VH S LR++ W G T Q + P C I
Sbjct: 214 KVYNYNNTLLSYYLGIGGVVKGRVHICSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYI 273
Query: 220 VEGGSGELRIQSPFYST---------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 372
E G+ E+ I+SP++ T A+ + F+ I S P+AP +K ++I
Sbjct: 274 GEDGNFEIEIRSPYHRTPLRLLDAQAASAFTSTLNFYAI--SGPIAPSGETAKMPVVVQI 331
Query: 373 HGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 552
I + PDL F W D E + + SR ++ N FA
Sbjct: 332 DEI-ALPDLSVPSFPNDYFLWVDFSAFTVDAE-EYVIGSRFFDISSTTSTVHLGDNPFAH 389
Query: 553 MCATTGMH 576
M A G+H
Sbjct: 390 MIACHGLH 397
[26][TOP]
>UniRef100_Q09G94 Polyprotein n=1 Tax=Grapevine fanleaf virus RepID=Q09G94_GFLV
Length = 1110
Score = 54.7 bits (130), Expect = 5e-06
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 10/187 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+ ++S LG+GGT+R VH + F S L ++ W GTT + + P +
Sbjct: 820 KVYNLNSTLVSCVLGMGGTIRGRVHICAPVFYSIVLWVVSEWNGTTMDWNELFKYPGVYV 879
Query: 220 VEGGSGELRIQSPFYST--------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 375
E GS E++I+SP++ T + F+ I + P+AP ++ ++I
Sbjct: 880 EEDGSFEVKIRSPYHRTPARLLVGQSQRDMSSLNFYAI--AGPIAPSGETARLPIVVQID 937
Query: 376 GIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 555
GI +PDL F W DKE ++ + SR + + + N FA M
Sbjct: 938 GI-VRPDLSLPSFEDDYFVWVDFSEFTLDKE-EIEIGSRFFDFTSRTCRVSMGENPFAAM 995
Query: 556 CATTGMH 576
A G+H
Sbjct: 996 IACHGLH 1002
[27][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 54.7 bits (130), Expect = 5e-06
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+Y +LS++LG+GG V+ VH S LR++ W G T Q + P C I
Sbjct: 819 KVYNYNNTLLSYYLGIGGVVKGRVHICSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYI 878
Query: 220 VEGGSGELRIQSPFYST---------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 372
E G+ E+ I+SP++ T A+ + F+ I S P+AP +K ++I
Sbjct: 879 GEDGNFEIEIRSPYHRTPLRLLDAQAASAFTSTLNFYAI--SGPIAPSGETAKMPVVVQI 936
Query: 373 HGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 552
I + PDL F W D E + + SR ++ N FA
Sbjct: 937 DEI-ALPDLSVPSFPNDYFLWVDFSAFTVDAE-EYVIGSRFFDISSTTSTVHLGDNPFAH 994
Query: 553 MCATTGMH 576
M A G+H
Sbjct: 995 MIACHGLH 1002
[28][TOP]
>UniRef100_UPI00003FE541 capsid protein n=1 Tax=Blackcurrant reversion virus
RepID=UPI00003FE541
Length = 533
Score = 54.3 bits (129), Expect = 7e-06
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Frame = +1
Query: 7 LTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII--WGTTP 180
L + + T SG T S+ G GG++ V T S VSC L + I G P
Sbjct: 211 LDIGTSTTTVSGWRTVSFPAAYALFLQGHGGSLVGEVVHTGSAAVSCALHLCISFGGAPP 270
Query: 181 TIAQTGQMPHCDIVEG-GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 357
T+ + P + G G +++Q+P+ + + A +V P+A + ++
Sbjct: 271 TLEEALVFPGFRLPSGEGKFHIKVQTPYGRLSTLTPDCA-LYVYLAGGPIAVAPMSVPYQ 329
Query: 358 FYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFV 537
F I + + + I + F W + +D + +P+R+S+LV+ D T
Sbjct: 330 FCIHLERLVDDGAPPRTIGLIREFNWATINNFKSD-DITFAIPARLSDLVLTCGDVTMST 388
Query: 538 NAFAIMCATTG 570
N A++ + G
Sbjct: 389 NPLALLIGSCG 399
[29][TOP]
>UniRef100_Q09G74 Polyprotein n=1 Tax=Grapevine fanleaf virus RepID=Q09G74_GFLV
Length = 1110
Score = 54.3 bits (129), Expect = 7e-06
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 10/187 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+ ++S LG+GGT+R VH + F S L ++ W GTT + + P +
Sbjct: 820 KVYNLNSTLVSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGGYV 879
Query: 220 VEGGSGELRIQSPFYST--------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 375
E GS E++I+SP++ T + F+VI + P+AP ++ ++I
Sbjct: 880 EEDGSFEVKIRSPYHRTPARLLVGQSQRDMSSLNFYVI--AGPIAPSGETARLPIVVQID 937
Query: 376 GIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 555
I +PDL F W DKE ++ + SR S+ + + N FA M
Sbjct: 938 EI-VRPDLSLPSFEDDYFVWVDFSEFTLDKE-EIEIGSRFSDFTSRTCRVSMGENPFAAM 995
Query: 556 CATTGMH 576
A G+H
Sbjct: 996 IACHGLH 1002
[30][TOP]
>UniRef100_Q9YK98 Coat protein n=2 Tax=Blackcurrant reversion virus RepID=POL2_BRAV
Length = 1626
Score = 54.3 bits (129), Expect = 7e-06
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Frame = +1
Query: 7 LTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII--WGTTP 180
L + + T SG T S+ G GG++ V T S VSC L + I G P
Sbjct: 1304 LDIGTSTTTVSGWRTVSFPAAYALFLQGHGGSLVGEVVHTGSAAVSCALHLCISFGGAPP 1363
Query: 181 TIAQTGQMPHCDIVEG-GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFE 357
T+ + P + G G +++Q+P+ + + A +V P+A + ++
Sbjct: 1364 TLEEALVFPGFRLPSGEGKFHIKVQTPYGRLSTLTPDCA-LYVYLAGGPIAVAPMSVPYQ 1422
Query: 358 FYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFV 537
F I + + + I + F W + +D + +P+R+S+LV+ D T
Sbjct: 1423 FCIHLERLVDDGAPPRTIGLIREFNWATINNFKSD-DITFAIPARLSDLVLTCGDVTMST 1481
Query: 538 NAFAIMCATTG 570
N A++ + G
Sbjct: 1482 NPLALLIGSCG 1492
[31][TOP]
>UniRef100_Q65028 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus
RepID=Q65028_ARMV
Length = 737
Score = 53.9 bits (128), Expect = 9e-06
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y++ +LS++LG+GG V+ VH S LR++ W G T Q + P C I
Sbjct: 446 KVYNFNNTLLSYYLGIGGVVKGKVHICSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYI 505
Query: 220 VEGGSGELRIQSPFYST---------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 372
E G+ E+ I+SP++ T A+ + F+ I S P+AP +K ++I
Sbjct: 506 DEDGNFEIEIRSPYHRTPLRLLDAQSASSFTSTLNFYAI--SGPIAPSGETAKMPVVVQI 563
Query: 373 HGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 552
I + PDL F W D E + + SR ++ N FA
Sbjct: 564 DEI-ALPDLSVPSFPNDYFLWVDFSSFTVDVE-EYVIGSRFFDISSTTSTVALGDNPFAH 621
Query: 553 MCATTGMH 576
M A G+H
Sbjct: 622 MIACHGLH 629
[32][TOP]
>UniRef100_Q2HYV4 56K (Fragment) n=1 Tax=Grapevine fanleaf virus RepID=Q2HYV4_GFLV
Length = 504
Score = 53.9 bits (128), Expect = 9e-06
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
Frame = +1
Query: 52 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVE 225
Y+ ++S LG+GGT+R VH + F S L ++ W GTT + + P + E
Sbjct: 216 YNLNSALVSCVLGMGGTIRGKVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEE 275
Query: 226 GGSGELRIQSPFYST--------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGI 381
GS E++I+SP++ T + F+ I S P+AP ++ ++I I
Sbjct: 276 DGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAI--SGPIAPSGETARLPIVVQIDEI 333
Query: 382 DSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCA 561
+PDL + F W DKE ++ + SR + + N FA M A
Sbjct: 334 -VRPDLSLPSSEDDYFVWVDFSEFTLDKE-EIEIGSRFFDFTSSTCRVSMGENPFAAMIA 391
Query: 562 TTGMH 576
G+H
Sbjct: 392 CHGLH 396
[33][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 53.9 bits (128), Expect = 9e-06
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Frame = +1
Query: 46 ETYSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIII-W-GTTPTIAQTGQMPHCDI 219
+ Y+Y +LS +LG+GG V+ VH S LR++ W G T Q + P C +
Sbjct: 819 KVYNYNNTLLSFYLGIGGVVKGRVHICSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYV 878
Query: 220 VEGGSGELRIQSPFYST---------ANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 372
E G+ E+ I+SP++ T A+ + F+ I S P+AP +K ++I
Sbjct: 879 DENGNFEIEIRSPYHRTPLRLRDAQVASSFTSTLNFYAI--SGPIAPSGEIAKMPVVVQI 936
Query: 373 HGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 552
I + PDL F W D E + + SR ++ + N FA
Sbjct: 937 DEI-ALPDLSVPSFPNDYFLWVDFSAFTVDVE-EYVIGSRFFDITSTTSRVSLGDNPFAH 994
Query: 553 MCATTGMH 576
M A G+H
Sbjct: 995 MIACHGLH 1002