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[1][TOP] >UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6XPY1_9SECO Length = 330 Score = 206 bits (523), Expect = 1e-51 Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 1/189 (0%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V Sbjct: 8 DLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQ 67 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A F Sbjct: 68 CTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAF 127 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQM 539 WV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ +KE + Sbjct: 128 WVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIAL 187 Query: 540 FVPSRVSNL 566 +PSR++N+ Sbjct: 188 KIPSRIANI 196 [2][TOP] >UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus RepID=Q6JX06_9SECO Length = 1350 Score = 206 bits (523), Expect = 1e-51 Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 1/189 (0%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V Sbjct: 1028 DLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQ 1087 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A F Sbjct: 1088 CTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAF 1147 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQM 539 WV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ +KE + Sbjct: 1148 WVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIAL 1207 Query: 540 FVPSRVSNL 566 +PSR++N+ Sbjct: 1208 KIPSRIANI 1216 [3][TOP] >UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE Length = 520 Score = 203 bits (517), Expect = 6e-51 Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DL+++L+P Q+A+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V Sbjct: 183 DLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVR 242 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 +TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F Sbjct: 243 TTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAF 302 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536 +V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K + Sbjct: 303 YVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIK 362 Query: 537 MFVPSRVSNL 566 + +PSR+ NL Sbjct: 363 VKIPSRIGNL 372 [4][TOP] >UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV Length = 1357 Score = 203 bits (517), Expect = 6e-51 Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DL+++L+P Q+A+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V Sbjct: 1020 DLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVR 1079 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 +TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F Sbjct: 1080 TTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAF 1139 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536 +V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K + Sbjct: 1140 YVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIK 1199 Query: 537 MFVPSRVSNL 566 + +PSR+ NL Sbjct: 1200 VKIPSRIGNL 1209 [5][TOP] >UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=UPI0000163D16 Length = 514 Score = 203 bits (516), Expect = 8e-51 Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 3/191 (1%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 D++++L P Q+A+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + Sbjct: 184 DIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQ 243 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+F Sbjct: 244 CTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARF 303 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEF 533 WV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF + P+ K K Sbjct: 304 WVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKIL 363 Query: 534 QMFVPSRVSNL 566 ++ +PSRV N+ Sbjct: 364 KLTLPSRVCNI 374 [6][TOP] >UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV Length = 1324 Score = 203 bits (516), Expect = 8e-51 Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 3/191 (1%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 D++++L P Q+A+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F + Sbjct: 994 DIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQ 1053 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+F Sbjct: 1054 CTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARF 1113 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEF 533 WV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF + P+ K K Sbjct: 1114 WVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKIL 1173 Query: 534 QMFVPSRVSNL 566 ++ +PSRV N+ Sbjct: 1174 KLTLPSRVCNI 1184 [7][TOP] >UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus RepID=Q64959_9SECO Length = 510 Score = 202 bits (513), Expect = 2e-50 Identities = 100/189 (52%), Positives = 133/189 (70%), Gaps = 1/189 (0%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD++L+P QLA+GT A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VH Sbjct: 183 DLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVH 242 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 STSS ++ KLR+ +W + + + H + G IQ+ +TANFG GA+F Sbjct: 243 STSSCLLTSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARF 301 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGK-DKEFQM 539 W++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQRFGWFM+ P K E Sbjct: 302 WIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDF 361 Query: 540 FVPSRVSNL 566 +PSR+ N+ Sbjct: 362 KIPSRIGNI 370 [8][TOP] >UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO Length = 1344 Score = 194 bits (493), Expect = 4e-48 Identities = 88/190 (46%), Positives = 131/190 (68%), Gaps = 2/190 (1%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD+VL +A+GT+ T +P++LA + + + + YSYA G+LSHFLGVGG + FSVH Sbjct: 1016 DLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVH 1075 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 ST+S FVSC LR+ +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F Sbjct: 1076 STASTFVSCSLRVALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAF 1135 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536 ++ L +P+APE +E+ F++YI IHGI+++ LC++INY Q F WFM++ Sbjct: 1136 YIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVS 1195 Query: 537 MFVPSRVSNL 566 + +P+R++NL Sbjct: 1196 LKIPARMANL 1205 [9][TOP] >UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B Length = 511 Score = 191 bits (486), Expect = 3e-47 Identities = 89/190 (46%), Positives = 130/190 (68%), Gaps = 2/190 (1%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD++L +A+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVH Sbjct: 183 DLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVH 242 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 ST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F Sbjct: 243 STASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAF 302 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536 ++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++ Sbjct: 303 YISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVS 362 Query: 537 MFVPSRVSNL 566 + +P+R++NL Sbjct: 363 LKIPARMANL 372 [10][TOP] >UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO Length = 1343 Score = 191 bits (486), Expect = 3e-47 Identities = 89/190 (46%), Positives = 130/190 (68%), Gaps = 2/190 (1%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD++L +A+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVH Sbjct: 1015 DLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVH 1074 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 ST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F Sbjct: 1075 STASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAF 1134 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536 ++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++ Sbjct: 1135 YISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVS 1194 Query: 537 MFVPSRVSNL 566 + +P+R++NL Sbjct: 1195 LKIPARMANL 1204 [11][TOP] >UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus RepID=Q1T7B1_CNSV Length = 569 Score = 115 bits (288), Expect = 2e-24 Identities = 59/170 (34%), Positives = 91/170 (53%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+ Sbjct: 196 DLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVY 254 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 S+ V+ KL I +W + H D G + +L I+ FY+++ +G GA Sbjct: 255 LVGSQLVASKLHISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVI 314 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 512 + L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P Sbjct: 315 QITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEP 364 [12][TOP] >UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus RepID=UPI0000164A26 Length = 564 Score = 114 bits (284), Expect = 7e-24 Identities = 60/170 (35%), Positives = 91/170 (53%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+ Sbjct: 184 DLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVY 242 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 S+ V+ + RI +W I H D G + +L I+ FY+++ +G GA Sbjct: 243 LVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVI 302 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 512 V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P Sbjct: 303 QVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 352 [13][TOP] >UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV Length = 1240 Score = 114 bits (284), Expect = 7e-24 Identities = 60/170 (35%), Positives = 91/170 (53%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+ Sbjct: 867 DLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVY 925 Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362 S+ V+ + RI +W I H D G + +L I+ FY+++ +G GA Sbjct: 926 LVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVI 985 Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 512 V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P Sbjct: 986 QVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 1035 [14][TOP] >UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus RepID=A2ID55_9SECO Length = 784 Score = 64.3 bits (155), Expect = 6e-09 Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%) Frame = +3 Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182 ++DM + P ++ L T A+T L A ++G E + I+S + G GT + Sbjct: 451 EIDMRVGPFRIPLATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGEII 510 Query: 183 STSSKFVSCKLRIIIWGT-TP--TIAQTGQMPHCDIIEGGSGE--LRIQSPFYSTANFGS 347 + V C L I + + TP Q + PH +++GG GE LRI +P + A+F S Sbjct: 511 KVGTAQVQCDLLIYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAP-EAIASFHS 568 Query: 348 EGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGW 497 G ++ + P AP+ V + FEF + IDS + + + F W Sbjct: 569 GGVFLHIVVAAGPTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSW 618 [15][TOP] >UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV Length = 515 Score = 57.0 bits (136), Expect = 1e-06 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%) Frame = +3 Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290 SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289 Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434 G E+ I++ +S A + ++PLS P+AP+ +EF + I Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337 [16][TOP] >UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV Length = 515 Score = 56.2 bits (134), Expect = 2e-06 Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%) Frame = +3 Query: 120 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEGG 293 Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290 Query: 294 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 437 E+ I++ F+S A + ++PLS P+AP+ +EF + I+ Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338 [17][TOP] >UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV Length = 1110 Score = 56.2 bits (134), Expect = 2e-06 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Frame = +3 Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191 + + P + LGT +A L +++ + Y+Y +LS +LG+GG V+ VH S Sbjct: 787 LTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICS 846 Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338 LR++ W G T Q + P C + E G+ E+ I+SP++ T A+ Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVAS 906 Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461 + F+ I S P+AP +K ++I I + PDL Sbjct: 907 SFTSTLNFYAI--SGPIAPSGEIAKMPVVVQIDEI-ALPDL 944 [18][TOP] >UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV Length = 1118 Score = 56.2 bits (134), Expect = 2e-06 Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%) Frame = +3 Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191 + + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S Sbjct: 795 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 854 Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338 LR++ W G T Q + P C I E G+ E+ I+SP++ T A+ Sbjct: 855 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQAAS 914 Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461 + F+ I S P+AP +K ++I+ I + PDL Sbjct: 915 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQINEI-ALPDL 952 [19][TOP] >UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus RepID=Q65624_9SECO Length = 557 Score = 55.8 bits (133), Expect = 2e-06 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 5/162 (3%) Frame = +3 Query: 99 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 269 SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317 Query: 270 HCDIIEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 446 C I GG +RIQ+PF F + G Q + + PM + + + +++ + I Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376 Query: 447 SQPD-LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLV 569 + D + I F W + FQ +P+R+S+LV Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLV 416 [20][TOP] >UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV Length = 1084 Score = 55.8 bits (133), Expect = 2e-06 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Frame = +3 Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191 + + P + L T +A L +++ + Y+Y +LS++LGVGG V+ VH S Sbjct: 761 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGVGGVVKGKVHICS 820 Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338 LR++ W G T Q + P C I E G+ E+ I+SP++ T A+ Sbjct: 821 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 880 Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461 + F+ I S P+AP +K ++I I + PDL Sbjct: 881 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 918 [21][TOP] >UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV Length = 515 Score = 55.5 bits (132), Expect = 3e-06 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%) Frame = +3 Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289 Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 437 G E+ I++ +S A + ++PLS P+AP+ +EF + I+ Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338 [22][TOP] >UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862 Length = 513 Score = 55.1 bits (131), Expect = 4e-06 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +3 Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287 Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434 G E+ I++ +S A + ++PLS P+AP+ +EF + I Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335 [23][TOP] >UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus RepID=B1A9X8_ARMV Length = 521 Score = 55.1 bits (131), Expect = 4e-06 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 11/161 (6%) Frame = +3 Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191 + + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S Sbjct: 198 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 257 Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338 LR++ W G T Q + P C I E G+ E+ I+SP++ T A+ Sbjct: 258 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQSAS 317 Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461 + F+ I S P+AP ++ ++I+ I + PDL Sbjct: 318 SFTSTLNFYAI--SGPIAPSGETARMPVVVQINEI-ALPDL 355 [24][TOP] >UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV Length = 1101 Score = 55.1 bits (131), Expect = 4e-06 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%) Frame = +3 Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290 SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH + Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875 Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434 G E+ I++ +S A + ++PLS P+AP+ +EF + I Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923 [25][TOP] >UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532 Length = 505 Score = 54.3 bits (129), Expect = 6e-06 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Frame = +3 Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191 + + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S Sbjct: 182 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 241 Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338 LR++ W G T Q + P C I E G+ E+ I+SP++ T A+ Sbjct: 242 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 301 Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461 + F+ I S P+AP +K ++I I + PDL Sbjct: 302 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 339 [26][TOP] >UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus RepID=Q5L492_TRSV Length = 515 Score = 54.3 bits (129), Expect = 6e-06 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%) Frame = +3 Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290 SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH + Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289 Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434 G E+ ++ +S++ + ++PLS P+AP+ +EF + I Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337 [27][TOP] >UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV Length = 1083 Score = 54.3 bits (129), Expect = 6e-06 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Frame = +3 Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191 + + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S Sbjct: 760 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLGIGGVVKGRVHICS 819 Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338 LR++ W G T Q + P C I E G+ E+ I+SP++ T A+ Sbjct: 820 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 879 Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461 + F+ I S P+AP +K ++I I + PDL Sbjct: 880 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 917 [28][TOP] >UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN Length = 1110 Score = 54.3 bits (129), Expect = 6e-06 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%) Frame = +3 Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191 + + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S Sbjct: 787 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 846 Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338 LR++ W G T Q + P C I E G+ E+ I+SP++ T A+ Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 906 Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461 + F+ I S P+AP +K ++I I + PDL Sbjct: 907 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 944