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[1][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 206 bits (523), Expect = 1e-51
Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 1/189 (0%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V
Sbjct: 8 DLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQ 67
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A F
Sbjct: 68 CTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAF 127
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQM 539
WV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ +KE +
Sbjct: 128 WVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIAL 187
Query: 540 FVPSRVSNL 566
+PSR++N+
Sbjct: 188 KIPSRIANI 196
[2][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 206 bits (523), Expect = 1e-51
Identities = 99/189 (52%), Positives = 131/189 (69%), Gaps = 1/189 (0%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG + F V
Sbjct: 1028 DLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGGILHFKVQ 1087
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
TSS FVS +LR+ +WG T+ Q QMPH D+ G + L+IQSPFY+TAN G A F
Sbjct: 1088 CTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAF 1147
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWF-MVKPEGKDKEFQM 539
WV P+SSPMAPE +ES E+YI+I GI++ LC+ INYKQ FGWF +V+ +KE +
Sbjct: 1148 WVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIAL 1207
Query: 540 FVPSRVSNL 566
+PSR++N+
Sbjct: 1208 KIPSRIANI 1216
[3][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 203 bits (517), Expect = 6e-51
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DL+++L+P Q+A+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V
Sbjct: 183 DLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVR 242
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
+TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F
Sbjct: 243 TTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAF 302
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536
+V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K +
Sbjct: 303 YVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIK 362
Query: 537 MFVPSRVSNL 566
+ +PSR+ NL
Sbjct: 363 VKIPSRIGNL 372
[4][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 203 bits (517), Expect = 6e-51
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DL+++L+P Q+A+GT+A P++LA K +TSG YSYA G+LSHFLGVGGT+ F V
Sbjct: 1020 DLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYSYAAGLLSHFLGVGGTIHFVVR 1079
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
+TSS FV+ KLRI +WGT P Q QMPH D+ L+IQSPF+STANFG+ G+ F
Sbjct: 1080 TTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAF 1139
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536
+V L +PMAPE VE+ E+YI+I GI++ P LC++INYKQRF W +++ K +
Sbjct: 1140 YVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIK 1199
Query: 537 MFVPSRVSNL 566
+ +PSR+ NL
Sbjct: 1200 VKIPSRIGNL 1209
[5][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 203 bits (516), Expect = 8e-51
Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 3/191 (1%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
D++++L P Q+A+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F +
Sbjct: 184 DIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQ 243
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+F
Sbjct: 244 CTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARF 303
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEF 533
WV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF + P+ K K
Sbjct: 304 WVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKIL 363
Query: 534 QMFVPSRVSNL 566
++ +PSRV N+
Sbjct: 364 KLTLPSRVCNI 374
[6][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 203 bits (516), Expect = 8e-51
Identities = 97/191 (50%), Positives = 133/191 (69%), Gaps = 3/191 (1%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
D++++L P Q+A+G + PL+ A + ++SG YSYA G+LSHFLG+GGT+ F +
Sbjct: 994 DIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQ 1053
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
TSS FV+ +LR+ +WG T T+ Q QMPH D L+IQSPFY+TANFG GA+F
Sbjct: 1054 CTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARF 1113
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMV--KPEGK-DKEF 533
WV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY QRF WF + P+ K K
Sbjct: 1114 WVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKIL 1173
Query: 534 QMFVPSRVSNL 566
++ +PSRV N+
Sbjct: 1174 KLTLPSRVCNI 1184
[7][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 202 bits (513), Expect = 2e-50
Identities = 100/189 (52%), Positives = 133/189 (70%), Gaps = 1/189 (0%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD++L+P QLA+GT A T PL+ AEKS+T++ ETYSY+ G+LSHFLG+GG +RF VH
Sbjct: 183 DLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHFLGIGGKLRFRVH 242
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
STSS ++ KLR+ +W + + + H + G IQ+ +TANFG GA+F
Sbjct: 243 STSSCLLTSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACCATANFGDSGARF 301
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKPEGK-DKEFQM 539
W++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINYKQRFGWFM+ P K E
Sbjct: 302 WIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDF 361
Query: 540 FVPSRVSNL 566
+PSR+ N+
Sbjct: 362 KIPSRIGNI 370
[8][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 194 bits (493), Expect = 4e-48
Identities = 88/190 (46%), Positives = 131/190 (68%), Gaps = 2/190 (1%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD+VL +A+GT+ T +P++LA + + + + YSYA G+LSHFLGVGG + FSVH
Sbjct: 1016 DLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYSYAAGVLSHFLGVGGDIIFSVH 1075
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
ST+S FVSC LR+ +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F
Sbjct: 1076 STASTFVSCSLRVALWGTIPTTEELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAF 1135
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536
++ L +P+APE +E+ F++YI IHGI+++ LC++INY Q F WFM++
Sbjct: 1136 YIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVS 1195
Query: 537 MFVPSRVSNL 566
+ +P+R++NL
Sbjct: 1196 LKIPARMANL 1205
[9][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 191 bits (486), Expect = 3e-47
Identities = 89/190 (46%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD++L +A+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVH
Sbjct: 183 DLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVH 242
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
ST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F
Sbjct: 243 STASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAF 302
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536
++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++
Sbjct: 303 YISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVS 362
Query: 537 MFVPSRVSNL 566
+ +P+R++NL
Sbjct: 363 LKIPARMANL 372
[10][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 191 bits (486), Expect = 3e-47
Identities = 89/190 (46%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD++L +A+GT+ T +P++LA + + + + YSYA GILSHFLGVGG + FSVH
Sbjct: 1015 DLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYSYAAGILSHFLGVGGEIIFSVH 1074
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
ST+S FVSC LRI +WGT PT + Q+PH D+ L+IQSPF++TANFG +G F
Sbjct: 1075 STASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAF 1134
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVK--PEGKDKEFQ 536
++ L +P+APE +E+ F++YI IHGI + +LC++INY Q F WFM++
Sbjct: 1135 YISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVS 1194
Query: 537 MFVPSRVSNL 566
+ +P+R++NL
Sbjct: 1195 LKIPARMANL 1204
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 115 bits (288), Expect = 2e-24
Identities = 59/170 (34%), Positives = 91/170 (53%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+
Sbjct: 196 DLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVY 254
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
S+ V+ KL I +W + H D G + +L I+ FY+++ +G GA
Sbjct: 255 LVGSQLVASKLHISMWSKEQHVQHQAMNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVI 314
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 512
+ L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P
Sbjct: 315 QITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQRFGWFAVEP 364
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 114 bits (284), Expect = 7e-24
Identities = 60/170 (35%), Positives = 91/170 (53%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+
Sbjct: 184 DLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVY 242
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
S+ V+ + RI +W I H D G + +L I+ FY+++ +G GA
Sbjct: 243 LVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVI 302
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 512
V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P
Sbjct: 303 QVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 352
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 114 bits (284), Expect = 7e-24
Identities = 60/170 (35%), Positives = 91/170 (53%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
DLD+ L P +L LG T +PL+ A KS + YS+A L+HF G+GG + V+
Sbjct: 867 DLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYSHAAARLAHFQGIGGVLHGVVY 925
Query: 183 STSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYSTANFGSEGAQF 362
S+ V+ + RI +W I H D G + +L I+ FY+++ +G GA
Sbjct: 926 LVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGVAFDLPIKDAFYASSVYGDSGAVI 985
Query: 363 WVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGWFMVKP 512
V L SPM+P +++ F+ +I G +C+ IN+ QRFGWF V+P
Sbjct: 986 QVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQRFGWFAVEP 1035
[14][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 64.3 bits (155), Expect = 6e-09
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Frame = +3
Query: 3 DLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVH 182
++DM + P ++ L T A+T L A ++G E + I+S + G GT +
Sbjct: 451 EIDMRVGPFRIPLATRASTLLGFQFARLLTYSTGNEIPHFKQAIMSFYHGAAGTYHGEII 510
Query: 183 STSSKFVSCKLRIIIWGT-TP--TIAQTGQMPHCDIIEGGSGE--LRIQSPFYSTANFGS 347
+ V C L I + + TP Q + PH +++GG GE LRI +P + A+F S
Sbjct: 511 KVGTAQVQCDLLIYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFALRIPAP-EAIASFHS 568
Query: 348 EGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQRFGW 497
G ++ + P AP+ V + FEF + IDS + + + F W
Sbjct: 569 GGVFLHIVVAAGPTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTMEFSW 618
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[16][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 120 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEGG 293
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 294 SGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 437
E+ I++ F+S A + ++PLS P+AP+ +EF + I+
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[17][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 56.2 bits (134), Expect = 2e-06
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191
+ + P + LGT +A L +++ + Y+Y +LS +LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICS 846
Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338
LR++ W G T Q + P C + E G+ E+ I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVAS 906
Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 SFTSTLNFYAI--SGPIAPSGEIAKMPVVVQIDEI-ALPDL 944
[18][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 56.2 bits (134), Expect = 2e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 795 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 854
Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 855 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQAAS 914
Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461
+ F+ I S P+AP +K ++I+ I + PDL
Sbjct: 915 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQINEI-ALPDL 952
[19][TOP]
>UniRef100_Q65624 Polyprotein (Fragment) n=1 Tax=Blueberry leaf mottle virus
RepID=Q65624_9SECO
Length = 557
Score = 55.8 bits (133), Expect = 2e-06
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 5/162 (3%)
Frame = +3
Query: 99 SGIET-YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIW--GTTPTIAQTGQMP 269
SG T YS+ VGG + +V T SK +SC++ +I+ T + Q ++P
Sbjct: 258 SGTNTFYSFPAAYTQLLQSVGGILHGTVVQTGSKAISCEMFLILQPDKTAHNLEQALRLP 317
Query: 270 HCDIIEGGSG-ELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGID 446
C I GG +RIQ+PF F + G Q + + PM + + + +++ + I
Sbjct: 318 GCRIPTGGGPFSIRIQTPFQREQIFNT-GVQLVIYAVGGPMGAQAISAPYQYMVHFSHIQ 376
Query: 447 SQPD-LCKQINYKQRFGWFMVKPEGKDKEFQMFVPSRVSNLV 569
+ D + I F W + FQ +P+R+S+LV
Sbjct: 377 EEGDPPPRPIGNVLLFNWATISEMTNLTRFQ--IPARLSDLV 416
[20][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 55.8 bits (133), Expect = 2e-06
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191
+ + P + L T +A L +++ + Y+Y +LS++LGVGG V+ VH S
Sbjct: 761 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGVGGVVKGKVHICS 820
Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 821 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 880
Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 881 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 918
[21][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +3
Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 437
G E+ I++ +S A + ++PLS P+AP+ +EF + I+
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[22][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335
[23][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 55.1 bits (131), Expect = 4e-06
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 198 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 257
Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 258 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQSAS 317
Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461
+ F+ I S P+AP ++ ++I+ I + PDL
Sbjct: 318 SFTSTLNFYAI--SGPIAPSGETARMPVVVQINEI-ALPDL 355
[24][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923
[25][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 54.3 bits (129), Expect = 6e-06
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 182 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 241
Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 242 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 301
Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 302 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 339
[26][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.3 bits (129), Expect = 6e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +3
Query: 117 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIIEG 290
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 291 GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 434
G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[27][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
Length = 1083
Score = 54.3 bits (129), Expect = 6e-06
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 760 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLGIGGVVKGRVHICS 819
Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 820 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 879
Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 880 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 917
[28][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 54.3 bits (129), Expect = 6e-06
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Frame = +3
Query: 12 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 191
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 846
Query: 192 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIIEGGSGELRIQSPFYST---------AN 338
LR++ W G T Q + P C I E G+ E+ I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 906
Query: 339 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 461
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 944