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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 324 bits (830), Expect = 3e-87
Identities = 153/192 (79%), Positives = 164/192 (85%)
Frame = +1
Query: 1 VNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGY 180
V ATF DFN EQIPSAPID RK+ +L H+ KFLD KPYLP+HFVDTQYCKTPLVTGTGY
Sbjct: 166 VEATFNDFNTEQIPSAPIDEDRKQQILKHLFKFLDVKPYLPIHFVDTQYCKTPLVTGTGY 225
Query: 181 HNRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDK 360
HNRYSFKQ+AHAKYSHP EYA K SKGYFYNATYENARTL+H IK YGLPFN+ A K
Sbjct: 226 HNRYSFKQRAHAKYSHPEEYALKSTSKGYFYNATYENARTLVHLIKTYGLPFNMQFACPK 285
Query: 361 TELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTF 540
++LTD + YI +AN FFNDYPTLLFT NHISKR G LKVRPVYAVDDIFIIIELMLTF
Sbjct: 286 SDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLTF 345
Query: 541 PLTIQARKPSCC 576
PLTIQARKPSCC
Sbjct: 346 PLTIQARKPSCC 357
[2][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 213 bits (541), Expect = 1e-53
Identities = 101/191 (52%), Positives = 128/191 (67%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
+ATF DFNKEQI + D R N++ IH+F++ PY+PLHFVDT YCK PLVTGTGYH
Sbjct: 190 DATFRDFNKEQIKTEDSDALRLSNIMDLIHEFMNITPYMPLHFVDTFYCKLPLVTGTGYH 249
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
NR+S+ +++ A + HP YA KP SKGYF+NAT R L+H IK G PF+ D+
Sbjct: 250 NRHSYFRRSFAHFCHPELYAEKPTSKGYFFNATKHENRFLVHKIKHSGYPFDFTSDSDRN 309
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
+ F +PT++FT NHISKRDG LKVRPVYAVD++F+ +E ML FP
Sbjct: 310 -----------SKMADFLKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFP 358
Query: 544 LTIQARKPSCC 576
T+QARKP CC
Sbjct: 359 ATVQARKPECC 369
[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 206 bits (524), Expect = 1e-51
Identities = 99/191 (51%), Positives = 125/191 (65%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
+ATF DFN+EQ+ AP+DP+RK VL FL PYLP+HFVD Y K PL TGTGY
Sbjct: 161 DATFSDFNREQVKIAPLDPERKRTVLTLCKHFLACVPYLPIHFVDFMYAKLPLHTGTGYF 220
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
NR+S+ +AHA ++HP +Y + SKGY+ N T + ART++H +K++ LPFN
Sbjct: 221 NRFSYDAQAHASFAHPEQYHDRHTSKGYYINTTMQYARTIVHRLKQFALPFN-------- 272
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
D D FF PT+LFT NHIS RDG LK RPVYAVDD+F+I+E+MLTFP
Sbjct: 273 -PKDFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFP 331
Query: 544 LTIQARKPSCC 576
L + AR P CC
Sbjct: 332 LLVMARLPECC 342
[4][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 203 bits (517), Expect = 7e-51
Identities = 104/191 (54%), Positives = 124/191 (64%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
NAT DF K Q PS P++P R +V++H+ K + PYLPLHFVDTQY K PL GTGYH
Sbjct: 160 NATVSDFFKPQTPSQPVEPTRINHVMSHVMKKMAITPYLPLHFVDTQYDKRPLANGTGYH 219
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
NR S + HA +SHP EY +K SKGY+ NA E+AR+LIH+IK YG PF +D
Sbjct: 220 NRRSHEMNIHALFSHPKEYESKRTSKGYYVNAFLESARSLIHWIKLYGNPFRHCPSDLAQ 279
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
L + FF PT+LFT NHIS RDG LK RPVYAVDD+F+ IE MLTFP
Sbjct: 280 SLRE------------FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFP 327
Query: 544 LTIQARKPSCC 576
+ ARKP CC
Sbjct: 328 AHVIARKPECC 338
[5][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 186 bits (471), Expect = 1e-45
Identities = 96/188 (51%), Positives = 119/188 (63%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
NATF DFN+EQIPSAPID RK VL + FL+ P+LP+HFVDT++C TP T TGY
Sbjct: 162 NATFSDFNREQIPSAPIDETRKNMVLPLVIYFLNALPFLPIHFVDTRFCGTPKHTATGYF 221
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
R+S + HA Y+ YA +P SKGYF+N YE +RT +H IKE+G PF
Sbjct: 222 QRFSTFFRTHAYYARNKLYALRPTSKGYFFNTVYEFSRTWMHHIKEHGYPF--------- 272
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
+ D + F + T+LFT NHIS RDG LK RPVYAVDD FI+ ELM++FP
Sbjct: 273 -VPSHDALDNARQYRIFMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFP 331
Query: 544 LTIQARKP 567
L + AR P
Sbjct: 332 LHVMARYP 339
[6][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 177 bits (449), Expect = 5e-43
Identities = 93/191 (48%), Positives = 116/191 (60%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
+AT DF K Q+PS PI RK+ +L + FL P+LPLHF+D+ + KTPL TGTGY
Sbjct: 162 DATVSDFFKPQVPSDPIPEDRKQRILNQVISFLACTPFLPLHFIDSLWDKTPLHTGTGYF 221
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
NR+SF + HA +S P Y + SKGYF N E AR+ IH IK +G PF+ + DK
Sbjct: 222 NRHSFAARIHAMFSAPKLYERRTTSKGYFINYFLETARSTIHSIKLHGYPFDPSKVPDKG 281
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
D SF P +LFT NHIS RDG LK RPVYA+DD+FI +E +TFP
Sbjct: 282 -----------DALRSFILKRPVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFP 330
Query: 544 LTIQARKPSCC 576
L + ARK CC
Sbjct: 331 LHVMARKIECC 341
[7][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 176 bits (446), Expect = 1e-42
Identities = 95/191 (49%), Positives = 117/191 (61%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
+AT +DF K QIPS PI RK+ +L + FL P+LPLHF+D+ + KTPL TGTGY
Sbjct: 162 DATVKDFFKPQIPSDPIPEARKQRILDLVISFLACTPFLPLHFIDSLWDKTPLHTGTGYF 221
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
NR+SF + HA +S P Y + SKGYF N E AR+ IH IK +G PF+
Sbjct: 222 NRHSFAARIHAMFSAPRLYERRTTSKGYFINYFLETARSTIHNIKLHGFPFD-------- 273
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
S V SF PT+LFT NHIS RDG LK RPVYA+DD+FI +E M+TFP
Sbjct: 274 ---PSKVPDLGSALRSFILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFP 330
Query: 544 LTIQARKPSCC 576
L + ARK CC
Sbjct: 331 LHVMARKIECC 341
[8][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 127 bits (318), Expect = 8e-28
Identities = 79/191 (41%), Positives = 104/191 (54%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
++ F DFN EQ + P +R+ +L I FL KPY +H+ DT++ L T Y
Sbjct: 124 DSIFNDFNHEQRITQPFTEERERRLLPLIDHFLGIKPYDIVHYCDTRFYPWKLSTRADYF 183
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
+ +S +KAHA SH P++AT P K YF N+ R+ +H IKEYG PF
Sbjct: 184 HNHSRDRKAHAAKSH-PDFATGPTKKSYFINSHLFFDRSTVHNIKEYGFPFR-------- 234
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
TDS + + + +F PT L +HISKRD LKVRPVY I+I IE ML +P
Sbjct: 235 PTTDSARNETL--LDLWFKKVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYP 291
Query: 544 LTIQARKPSCC 576
L QARK CC
Sbjct: 292 LLAQARKRDCC 302
[9][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 112 bits (281), Expect = 2e-23
Identities = 71/190 (37%), Positives = 98/190 (51%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
+A FEDFN+ QIPS P+ RK+ +L ++ F+ KPY +HF DT++ L Y
Sbjct: 128 DAIFEDFNQPQIPSIPLSYNRKQRILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYF 187
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
+ +S +K HA+ SH AT P K +F NA + R+ +H IK YGLPF + +
Sbjct: 188 HNHSNARKRHAQTSH-ASTATGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYEARN 246
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
++ +F PT L +HIS LKVRPV IF+ IE ML +P
Sbjct: 247 KIL----------LELWFKKIPTELLVRSHIS-NPKKLKVRPVNNAPMIFLRIECMLFYP 295
Query: 544 LTIQARKPSC 573
L Q RK C
Sbjct: 296 LLAQLRKQQC 305
[10][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 112 bits (280), Expect = 2e-23
Identities = 74/192 (38%), Positives = 101/192 (52%), Gaps = 2/192 (1%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
+A FEDFN+ QIPS P+ RK+ +L ++ F+ KPY +HF DT++ L Y
Sbjct: 128 DAIFEDFNQPQIPSIPLSYNRKQKILNLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYF 187
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPF--NIIQADD 357
+ +S +K HA+ SH AT P K +F NA + R+ +H IK YGLPF + +A +
Sbjct: 188 HNHSNARKRHAQTSH-ASTATGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYKARN 246
Query: 358 KTELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLT 537
+T L +F PT L +HIS LKVRPV IF+ IE ML
Sbjct: 247 QTLL------------ELWFKKIPTELLVRSHIS-NPKKLKVRPVNNAPMIFLRIECMLF 293
Query: 538 FPLTIQARKPSC 573
+PL Q RK C
Sbjct: 294 YPLLAQLRKQQC 305
[11][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 112 bits (280), Expect = 2e-23
Identities = 71/190 (37%), Positives = 97/190 (51%)
Frame = +1
Query: 4 NATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGYH 183
+A FEDFN+ QIPS P+ RK+ +L ++ F+ KPY +HF DT++ L Y
Sbjct: 128 DAIFEDFNQPQIPSIPLQHSRKQKILKLVNHFMGVKPYDIVHFCDTRFYPWDLSKKADYF 187
Query: 184 NRYSFKQKAHAKYSHPPEYATKPISKGYFYNATYENARTLIHFIKEYGLPFNIIQADDKT 363
+ +S +K HA+ SH AT P K +F NA + R+ +H IK YGLPF +
Sbjct: 188 HNHSNARKRHAQTSH-ASTATGPTKKSWFINAHLFHDRSTVHNIKLYGLPFKPHSYAARN 246
Query: 364 ELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDDIFIIIELMLTFP 543
++ +F PT L +HIS LKVRPV IF+ IE ML +P
Sbjct: 247 KILQ----------ELWFKKIPTELLVRSHIS-NPKKLKVRPVNNAPMIFLRIECMLFYP 295
Query: 544 LTIQARKPSC 573
L Q RK C
Sbjct: 296 LLAQLRKQQC 305
[12][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 91.7 bits (226), Expect = 4e-17
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Frame = +1
Query: 1 VNATFEDFNKEQIPSAPIDPQRKENVLAHIHKFLDTKPYLPLHFVDTQYCKTPLVTGTGY 180
++A FE+FN+ P + QR ++ I FL P+ P++F D ++ K LVT Y
Sbjct: 136 IDAIFENFNQAVSPVKDVTSQRLNEIMILIFHFLPIVPHPPVNFPDLRFYKWSLVTSADY 195
Query: 181 HNRYS--FKQKAHAKYSHPP---------EYATKPISKGYFYNATYENARTLIHFIKEYG 327
H +S + ++ ++H +Y+ P SKG+F+N+ R ++H IK G
Sbjct: 196 HAHHSSDMQNESTRYWTHLRDTSQLEDRFDYSKNPRSKGFFFNSLLLRCRRIVHNIKYTG 255
Query: 328 LPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTCNHISKRDGPLKVRPVYAVDD 507
P ++ KT ++ + PT+++ + ISK LKVRPVY
Sbjct: 256 WPIPHDPSESKT--------SFLQRMLYWTLMNPTVMYVRSQISKIT-KLKVRPVYNAPM 306
Query: 508 IFIIIELMLTFPLTIQARKPSCC 576
+F+++E MLT L Q RKP C
Sbjct: 307 LFLMLEAMLTLGLMAQCRKPDNC 329