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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 352 bits (903), Expect = 1e-95
Identities = 166/192 (86%), Positives = 176/192 (91%)
Frame = +3
Query: 3 NIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFI 182
N+ A K++LTD + YI +AN FFNDYPTLLFTRNHISKR G LKVRPVYAVDDIFI
Sbjct: 278 NMQFACPKSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPVYAVDDIFI 337
Query: 183 IIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRV 362
IIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSSYDQRLPRV
Sbjct: 338 IIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYDQRLPRV 397
Query: 363 ITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLP 542
ITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLP
Sbjct: 398 ITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLP 457
Query: 543 DGYAYRRTCCGI 578
DGYAYRRT CG+
Sbjct: 458 DGYAYRRTHCGV 469
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 254 bits (650), Expect = 3e-66
Identities = 117/171 (68%), Positives = 138/171 (80%), Gaps = 4/171 (2%)
Frame = +3
Query: 78 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCI 245
F + T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CI
Sbjct: 288 FMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCI 347
Query: 246 MYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQ 425
MY ETIRGSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQ
Sbjct: 348 MYSFETIRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQ 407
Query: 426 PTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
PTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ G+
Sbjct: 408 PTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGV 458
[3][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 248 bits (632), Expect = 3e-64
Identities = 110/168 (65%), Positives = 137/168 (81%)
Frame = +3
Query: 75 SFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYG 254
SF PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG
Sbjct: 286 SFILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYG 345
Query: 255 LETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 434
ETIRGSNR I++IA + +FF++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY
Sbjct: 346 YETIRGSNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTY 405
Query: 435 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
+YP+YPDL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC G+
Sbjct: 406 DYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGV 453
[4][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 247 bits (631), Expect = 4e-64
Identities = 112/180 (62%), Positives = 135/180 (75%)
Frame = +3
Query: 39 DSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTI 218
D D FF PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL +
Sbjct: 275 DFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLV 334
Query: 219 QARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRS 398
AR P CCIMYGLETIRGSN +I+ A+ + ++F++DWS YDQRLPR ITD+YYTDFL S
Sbjct: 335 MARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLES 394
Query: 399 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
LI+IN GYQPT +Y YPDL ++ RM NLLHFLHTWYNNM ++ DG+AY R CG+
Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGV 454
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 241 bits (615), Expect = 3e-62
Identities = 106/172 (61%), Positives = 136/172 (79%)
Frame = +3
Query: 63 DEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC 242
D SF P +LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CC
Sbjct: 282 DALRSFILKRPVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECC 341
Query: 243 IMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGY 422
IMYG ETIRGSNR I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL +IVI+HGY
Sbjct: 342 IMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGY 401
Query: 423 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
QPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC G+
Sbjct: 402 QPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGV 453
[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 223 bits (569), Expect = 6e-57
Identities = 100/167 (59%), Positives = 129/167 (77%)
Frame = +3
Query: 78 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 257
FF PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGL
Sbjct: 284 FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGL 343
Query: 258 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 437
ETIRGSN+ +++IA DY +FF++DWS +DQRLP VI +++T+++ L+V+NHGY PTYE
Sbjct: 344 ETIRGSNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYE 403
Query: 438 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
YP+YPDL + + R+ NL+ FL TWY NM F+ DG++Y R G+
Sbjct: 404 YPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGV 450
[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 201 bits (510), Expect = 4e-50
Identities = 85/136 (62%), Positives = 112/136 (82%)
Frame = +3
Query: 171 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 350
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 351 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 530
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120
Query: 531 FLLPDGYAYRRTCCGI 578
++ DG+AY RTC G+
Sbjct: 121 YVTADGFAYIRTCTGV 136
[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 195 bits (496), Expect = 2e-48
Identities = 90/167 (53%), Positives = 121/167 (72%)
Frame = +3
Query: 78 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 257
F +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGL
Sbjct: 315 FLKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGL 374
Query: 258 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 437
ETIRGSN ++ +A+ + +F ++DWS YDQRLP I ++ +L SL++I+HGY PT E
Sbjct: 375 ETIRGSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSE 434
Query: 438 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
Y ++ ++ R NL++F TWY NM FL DG+A+RR G+
Sbjct: 435 YED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGV 480
[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 140 bits (354), Expect = 5e-32
Identities = 78/190 (41%), Positives = 107/190 (56%), Gaps = 23/190 (12%)
Frame = +3
Query: 78 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 257
+F PT L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGL
Sbjct: 249 WFKKVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGL 307
Query: 258 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP--- 428
ETIRG +E+I+ +++F +DWS +D P I++ ++ +L + I+I+HGY
Sbjct: 308 ETIRGGMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISN 367
Query: 429 --------------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 548
+ EY T P+ ++ NL+ FL WY +M F+ PDG
Sbjct: 368 YHDHVHSFSAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDG 425
Query: 549 YAYRRTCCGI 578
+AYRRT G+
Sbjct: 426 FAYRRTHAGV 435
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 136 bits (342), Expect = 1e-30
Identities = 73/188 (38%), Positives = 106/188 (56%), Gaps = 21/188 (11%)
Frame = +3
Query: 78 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 257
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311
Query: 258 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 437
ETIRG IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371
Query: 438 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYA 554
Y + +L+E ++++NLL F++TW+ M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFA 431
Query: 555 YRRTCCGI 578
YRRT G+
Sbjct: 432 YRRTFAGV 439
[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 135 bits (339), Expect = 3e-30
Identities = 73/188 (38%), Positives = 105/188 (55%), Gaps = 21/188 (11%)
Frame = +3
Query: 78 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 257
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGF 311
Query: 258 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 437
ETIRG IE +A +S F +DWS +DQ +P + D++Y D++ +LI+I+ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHN 371
Query: 438 YPTY----------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYA 554
Y + +L+E ++++NLL F++TW+ M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFA 431
Query: 555 YRRTCCGI 578
YRRT G+
Sbjct: 432 YRRTFAGV 439
[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 134 bits (336), Expect = 7e-30
Identities = 72/188 (38%), Positives = 105/188 (55%), Gaps = 21/188 (11%)
Frame = +3
Query: 78 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 257
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311
Query: 258 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 437
ETIRG IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371
Query: 438 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYA 554
Y + +L+E ++++NLL F++TW+ M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFA 431
Query: 555 YRRTCCGI 578
Y RT G+
Sbjct: 432 YSRTFAGV 439
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 103 bits (256), Expect = 1e-20
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 31/193 (16%)
Frame = +3
Query: 93 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 272
PT+++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339
Query: 273 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 446
+ +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399
Query: 447 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 539
Y D K Y +D N+L F+ WY M F+
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458
Query: 540 PDGYAYRRTCCGI 578
PDGY Y R G+
Sbjct: 459 PDGYGYVRLLAGV 471
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 80.1 bits (196), Expect = 1e-13
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 263
Y F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261
Query: 264 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 431
+ G + A D YST +LDWS +D+ + + +R + GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321
Query: 432 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
YP PD + R++NL +++ + +LPDG + GI
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGI 366
[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 67.4 bits (163), Expect = 8e-10
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 11/174 (6%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 263
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289
Query: 264 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 422
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344
Query: 423 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGI 578
PT+ PT+P D K R++ L +L T N +LPDG YRR GI
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGI 395
[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 67.0 bits (162), Expect = 1e-09
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 263
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233
Query: 264 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 422
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288
Query: 423 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
PT+ PT+P D K L L + +LPDG YRR GI
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLF-EAPIILPDGRMYRRHFAGI 339
[17][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 66.2 bits (160), Expect = 2e-09
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Frame = +3
Query: 27 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 200
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 201 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 368
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 369 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 542
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 543 DGYAYRRTCCGI 578
DG YRR GI
Sbjct: 384 DGRMYRRHFAGI 395
[18][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 66.2 bits (160), Expect = 2e-09
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Frame = +3
Query: 27 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 200
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 201 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 368
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 369 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 542
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 543 DGYAYRRTCCGI 578
DG YRR GI
Sbjct: 384 DGRMYRRHFAGI 395
[19][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 66.2 bits (160), Expect = 2e-09
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Frame = +3
Query: 27 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 200
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 201 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 368
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 369 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 542
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 543 DGYAYRRTCCGI 578
DG YRR GI
Sbjct: 384 DGRMYRRHFAGI 395
[20][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 66.2 bits (160), Expect = 2e-09
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Frame = +3
Query: 27 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 200
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 201 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 368
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 369 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 542
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 543 DGYAYRRTCCGI 578
DG YRR GI
Sbjct: 384 DGRMYRRHFAGI 395
[21][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 66.2 bits (160), Expect = 2e-09
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Frame = +3
Query: 27 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 200
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 201 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 368
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 369 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLP 542
I YT ++S + GY PT+ P +P ++ K +++ L +L T N +LP
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-DKLERL--WLWTLENLFEAPIILP 383
Query: 543 DGYAYRRTCCGI 578
DG YRR GI
Sbjct: 384 DGRMYRRHFAGI 395
[22][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 64.7 bits (156), Expect = 5e-09
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Frame = +3
Query: 60 IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 227
+++ FFN + P LL T+ I K++ P K+R ++ +II E M + I+
Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277
Query: 228 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 386
+ +++G ET G + I R +F +LDWS +D+R ++ I YT
Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333
Query: 387 FLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYR 560
+++ + GY PT+ PT+P + + R++ L +L T N +LPDG YR
Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYR 389
Query: 561 RTCCGI 578
R GI
Sbjct: 390 RHFAGI 395
[23][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 64.7 bits (156), Expect = 5e-09
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 266
YP + T++ I P KVR ++ V + +++E M +PL R + +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258
Query: 267 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 431
G N + + SLDWS +D R L VI D+Y ++S N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318
Query: 432 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
+ YPD H ++ NL ++ T L DG ++RT GI
Sbjct: 319 VD---YPDSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGI 362
[24][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 61.6 bits (148), Expect = 4e-08
Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 263
+P LL T+ I K + P K+R ++ +II E ML + I+ + +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289
Query: 264 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 422
G Y I +F +LDWS +D+R ++ I Y +RS + + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344
Query: 423 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGI 578
PT+ P +P + K R++ L +L T N +LPDG YRR GI
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGI 395
[25][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 60.1 bits (144), Expect = 1e-07
Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Frame = +3
Query: 90 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 251
Y F R HI K+ G L KVR V+ + EL+ +PL + + +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296
Query: 252 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 419
G ETI G R ++ T +LDWS +D+ + +T +R +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356
Query: 420 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
Y PT+ YP T D DE + R++NL +++ + L+PDG R T GI
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGI 411
[26][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 58.2 bits (139), Expect = 5e-07
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 263
+P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291
Query: 264 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 434
G R + Y ++ +LDW +D++ I D + D + + + ++GY PT
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350
Query: 435 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
+YP + R+ L + + + +LP+G+ Y R GI
Sbjct: 351 DYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGI 398
[27][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 56.6 bits (135), Expect = 1e-06
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 263
+P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291
Query: 264 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 434
G R + Y ++ +LDW +D++ I D + D + + + ++GY PT
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350
Query: 435 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
+YP R+ L + + + +LP+G+ Y R GI
Sbjct: 351 DYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGI 398
[28][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
partitivirus RepID=A2VA07_9VIRU
Length = 132
Score = 56.2 bits (134), Expect = 2e-06
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +3
Query: 96 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 266
T L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETI
Sbjct: 8 TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67
Query: 267 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 431
RG + I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+
Sbjct: 68 RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123
[29][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 55.5 bits (132), Expect = 3e-06
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Frame = +3
Query: 90 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLE 260
Y T L R H+ + K+R V+ V + ++ E M +PL + +++G E
Sbjct: 191 YHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNE 250
Query: 261 TIRGSNRYI---EQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQP 428
++G + + Q R T SLDWS +D+R L VI D++ +S H Y+P
Sbjct: 251 IMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEP 307
Query: 429 TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGI 578
T Y + H+ R++NL ++ + L PDG Y+ T GI
Sbjct: 308 TIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGI 354