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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 243 bits (619), Expect = 1e-62
Identities = 110/192 (57%), Positives = 149/192 (77%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WLE GY+DRN+ ++SHL P+LG A+W+VFDA+GH+PT+V+TTVELES+RHL PHV IL
Sbjct: 42 WLERGYVDRNILMVSHLFTSPYLGMAIWYVFDAYGHIPTDVTTTVELESIRHLSPHVHIL 101
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
KD+TT TW+L+FHR GQSL+F+G GF+KP +W+I+ASSAQ+ CSADV +V+E Y
Sbjct: 102 KDNTTSTWILNFHREGGQSLNFAGPGFMKPKVWIIAASSAQMPCSADVQYVVEGYPQEKV 161
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L +LT + L+DLD++L+P QLA+GT+A T PL+ AEKS+T++ ETYS
Sbjct: 162 SSEDLLRRKILTLSVESTHLADLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYS 221
Query: 541 YAMGILSHFLGV 576
Y+ G+LSHFLG+
Sbjct: 222 YSAGLLSHFLGI 233
[2][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 240 bits (613), Expect = 5e-62
Identities = 108/192 (56%), Positives = 148/192 (77%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W++MGY+DRNL+LISHL+ F G A+W+VFDA+GH+P++++TT+EL+ VR+L PH+ +L
Sbjct: 887 WVQMGYMDRNLKLISHLAPSQFCGVAIWYVFDAYGHIPSDITTTIELDMVRNLSPHIHVL 946
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
++ T+ W +DFHR+CGQSL+F+G GF P LWVI+A+SAQL SA V + LEA TG+R
Sbjct: 947 REPTSAVWTIDFHRYCGQSLNFAGRGFCNPYLWVIAATSAQLPWSAPVVYRLEALVTGER 1006
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
V+GLAT+ VL YPI P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YS
Sbjct: 1007 YVQGLATEGVLEYPISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYS 1066
Query: 541 YAMGILSHFLGV 576
YA G+LSHFLGV
Sbjct: 1067 YAAGLLSHFLGV 1078
[3][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 228 bits (580), Expect = 3e-58
Identities = 102/192 (53%), Positives = 142/192 (73%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W++ GY+++NL ISHL+ F G A+W++FDA+G +P++V+T++ELE R LCPHV +L
Sbjct: 43 WMQAGYVNKNLTFISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHVHVL 102
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+DS T W +DFH+ CGQSL+FSG GF KPTLWVI+AS+AQL SA V + LEA A GD
Sbjct: 103 RDSKTSVWTIDFHKICGQSLNFSGRGFSKPTLWVIAASTAQLPWSAQVTYRLEALAQGDE 162
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
I GLAT S++TYPI E L D++++L P Q+A+G + + PL+ A + ++SG YS
Sbjct: 163 IAHGLATRSIVTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYS 222
Query: 541 YAMGILSHFLGV 576
YA G+LSHFLG+
Sbjct: 223 YAAGLLSHFLGI 234
[4][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 228 bits (580), Expect = 3e-58
Identities = 102/192 (53%), Positives = 142/192 (73%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W++ GY+++NL ISHL+ F G A+W++FDA+G +P++V+T++ELE R LCPHV +L
Sbjct: 853 WMQAGYVNKNLTFISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELEIARSLCPHVHVL 912
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+DS T W +DFH+ CGQSL+FSG GF KPTLWVI+AS+AQL SA V + LEA A GD
Sbjct: 913 RDSKTSVWTIDFHKICGQSLNFSGRGFSKPTLWVIAASTAQLPWSAQVTYRLEALAQGDE 972
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
I GLAT S++TYPI E L D++++L P Q+A+G + + PL+ A + ++SG YS
Sbjct: 973 IAHGLATRSIVTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIAYS 1032
Query: 541 YAMGILSHFLGV 576
YA G+LSHFLG+
Sbjct: 1033 YAAGLLSHFLGI 1044
[5][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 214 bits (546), Expect = 3e-54
Identities = 100/192 (52%), Positives = 141/192 (73%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WL GY+ +NLR +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L
Sbjct: 876 WLMDGYVSQNLRAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTL 935
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+D+TT +W++DFH+ CGQ+L+FSG GF KPTL+V+ AS QL SA+ F LE YATG+R
Sbjct: 936 RDATTSSWIIDFHKMCGQTLNFSGPGFCKPTLYVVVASEFQLARSAETKFRLEFYATGER 995
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+VRGL +++ LTYPI P L DLD+VL +A+GT T +P++LA + + + + YS
Sbjct: 996 LVRGL-SENPLTYPIKPGHLEDLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQAYS 1054
Query: 541 YAMGILSHFLGV 576
YA G+LSHFLGV
Sbjct: 1055 YAAGVLSHFLGV 1066
[6][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 211 bits (538), Expect = 2e-53
Identities = 98/192 (51%), Positives = 140/192 (72%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WL GY+ +NLR +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L
Sbjct: 43 WLMDGYVSQNLRAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTL 102
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+D+TT +W++DFH+ CGQ+L+FSG GF KPTL+++ AS QL SA+ F LE YATG+R
Sbjct: 103 RDATTSSWIIDFHKMCGQTLNFSGPGFCKPTLYIVVASEFQLARSAETKFRLEFYATGER 162
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+VRGL +++ LTYPI L DLD++L +A+GT T +P++LA + + + + YS
Sbjct: 163 LVRGL-SENPLTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYS 221
Query: 541 YAMGILSHFLGV 576
YA GILSHFLGV
Sbjct: 222 YAAGILSHFLGV 233
[7][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 211 bits (538), Expect = 2e-53
Identities = 98/192 (51%), Positives = 140/192 (72%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WL GY+ +NLR +SHL+ F G ++W++FDA+G +P ++STT+ELE + L PHVQ L
Sbjct: 875 WLMDGYVSQNLRAVSHLAPNSFSGISIWYIFDAYGKIPADISTTIELEMAKCLSPHVQTL 934
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+D+TT +W++DFH+ CGQ+L+FSG GF KPTL+++ AS QL SA+ F LE YATG+R
Sbjct: 935 RDATTSSWIIDFHKMCGQTLNFSGPGFCKPTLYIVVASEFQLARSAETKFRLEFYATGER 994
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+VRGL +++ LTYPI L DLD++L +A+GT T +P++LA + + + + YS
Sbjct: 995 LVRGL-SENPLTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQAYS 1053
Query: 541 YAMGILSHFLGV 576
YA GILSHFLGV
Sbjct: 1054 YAAGILSHFLGV 1065
[8][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 211 bits (536), Expect = 4e-53
Identities = 100/192 (52%), Positives = 137/192 (71%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WLE GY+ +NL ISHL+ F G A+W++FDA+G +P +V+TT ELE R PHVQ+L
Sbjct: 43 WLEQGYVSQNLTAISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHVQVL 102
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+D +T TWV+DFH+ CGQ+L+FSG G+ P +WVI+AS+ QL S F LE Y G++
Sbjct: 103 RDVSTSTWVIDFHKICGQTLNFSGQGYCVPKIWVIAASTFQLARSTATKFRLEFYTRGEK 162
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+VRGLA + L+YPI L+DL+++L+P Q+A+GT A P++LA K +TSG YS
Sbjct: 163 LVRGLA-EQPLSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYS 221
Query: 541 YAMGILSHFLGV 576
YA G+LSHFLGV
Sbjct: 222 YAAGLLSHFLGV 233
[9][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 211 bits (536), Expect = 4e-53
Identities = 100/192 (52%), Positives = 137/192 (71%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WLE GY+ +NL ISHL+ F G A+W++FDA+G +P +V+TT ELE R PHVQ+L
Sbjct: 880 WLEQGYVSQNLTAISHLAPNAFSGIAIWYIFDAYGKIPGDVTTTFELEMARSFDPHVQVL 939
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+D +T TWV+DFH+ CGQ+L+FSG G+ P +WVI+AS+ QL S F LE Y G++
Sbjct: 940 RDVSTSTWVIDFHKICGQTLNFSGQGYCVPKIWVIAASTFQLARSTATKFRLEFYTRGEK 999
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+VRGLA + L+YPI L+DL+++L+P Q+A+GT A P++LA K +TSG YS
Sbjct: 1000 LVRGLA-EQPLSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTAYS 1058
Query: 541 YAMGILSHFLGV 576
YA G+LSHFLGV
Sbjct: 1059 YAAGLLSHFLGV 1070
[10][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 131 bits (330), Expect = 3e-29
Identities = 72/192 (37%), Positives = 107/192 (55%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WL+ GYID NL+LI HL PF G + + + D G++ + T++ E + H+
Sbjct: 43 WLQKGYIDTNLKLICHLPRAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTT 102
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
D ++ +VLD+HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+
Sbjct: 103 SDVSSYEFVLDWHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEE 162
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+ R LA VL+YP L DLD+ L P +L LG T +PL+ A KS + YS
Sbjct: 163 LPRTLAPSPVLSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYS 221
Query: 541 YAMGILSHFLGV 576
+A L+HF G+
Sbjct: 222 HAAARLAHFQGI 233
[11][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 131 bits (330), Expect = 3e-29
Identities = 72/192 (37%), Positives = 107/192 (55%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WL+ GYID NL+LI HL PF G + + + D G++ + T++ E + H+
Sbjct: 726 WLQKGYIDTNLKLICHLPRAPFAGMSFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTT 785
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
D ++ +VLD+HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+
Sbjct: 786 SDVSSYEFVLDWHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEE 845
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+ R LA VL+YP L DLD+ L P +L LG T +PL+ A KS + YS
Sbjct: 846 LPRTLAPSPVLSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYS 904
Query: 541 YAMGILSHFLGV 576
+A L+HF G+
Sbjct: 905 HAAARLAHFQGI 916
[12][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 131 bits (329), Expect = 4e-29
Identities = 71/192 (36%), Positives = 107/192 (55%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
WL+ GY+D NL+LI HL PF G + + + D G++ + T++ E + H+
Sbjct: 55 WLQKGYVDTNLKLICHLPRAPFAGISFFVLIDGTGYLAKDAPTSLNEEEILSYPLHLVTT 114
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
D ++ +VLD+HR+ GQ FL+PTL++++ S+ L SA V F LEA + G+
Sbjct: 115 SDVSSYEFVLDWHRYIGQVPFAEENAFLRPTLFLVACVSSTLALSAKVEFYLEAQSVGEE 174
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
+ R LA VL+YP L DLD+ L P +L LG T +PL+ A KS + YS
Sbjct: 175 LPRTLAPSPVLSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVLYS 233
Query: 541 YAMGILSHFLGV 576
+A L+HF G+
Sbjct: 234 HAAARLAHFQGI 245
[13][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 64.3 bits (155), Expect = 6e-09
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +1
Query: 403 IGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGV 576
I P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGV
Sbjct: 1 ISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGV 58
[14][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 63.2 bits (152), Expect = 1e-08
Identities = 48/192 (25%), Positives = 85/192 (44%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G I + +++ A F G FDA+ + +++STT + PH +
Sbjct: 619 WITAGLIMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 677
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG +L FS T F P L + E +AD FV+E YA +
Sbjct: 678 HKNGTTSCDIDYGELCGHALWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 737
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + L T++A L +++ + Y+
Sbjct: 738 AKTFLGRPNFI-YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYN 796
Query: 541 YAMGILSHFLGV 576
Y +LS++LGV
Sbjct: 797 YNNTLLSYYLGV 808
[15][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 61.6 bits (148), Expect = 4e-08
Identities = 45/192 (23%), Positives = 85/192 (44%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + +++STT + PH +
Sbjct: 653 WITAGLVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 711
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG ++ FS T F P L + E +AD FV+E YA +
Sbjct: 712 HKNGTTSCDIDYGELCGHAMWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 771
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + L T++A L +++ + Y+
Sbjct: 772 AKTFLGRPNFI-YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYN 830
Query: 541 YAMGILSHFLGV 576
Y +LS++LG+
Sbjct: 831 YNNTLLSYYLGI 842
[16][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
Length = 1083
Score = 61.6 bits (148), Expect = 4e-08
Identities = 47/192 (24%), Positives = 85/192 (44%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G I + +++ A F G FDA+ + +++STT + PH +
Sbjct: 618 WITAGLIMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 676
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG +L FS T F P L + E +AD FV+E YA +
Sbjct: 677 HKNGTTSCDIDYGELCGHALWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 736
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + L T++A L +++ + Y+
Sbjct: 737 AKTFLGRPNFI-YSAEAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYN 795
Query: 541 YAMGILSHFLGV 576
Y +LS++LG+
Sbjct: 796 YNNTLLSYYLGI 807
[17][TOP]
>UniRef100_Q6JX05 P2 protein n=1 Tax=Grapevine deformation virus RepID=Q6JX05_9SECO
Length = 1107
Score = 61.2 bits (147), Expect = 5e-08
Identities = 53/194 (27%), Positives = 78/194 (40%), Gaps = 3/194 (1%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G ++ F G FDA+ + T+++TT + PH +
Sbjct: 642 WITSGLCMPKFEVVIRYPPNAFTGLTWVMSFDAYNRITTSITTTASPVYTLSV-PHWLLF 700
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
T T LD+ CG ++ F T F P L + E +AD FV+E YA +
Sbjct: 701 HAKGTTTCELDYGELCGHAMWFESTTFESPKLHFTCITGNNKELAADWEFVVELYAEMEP 760
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAA---TALPLTLAEKSVTTSGIE 531
+ L + + P S L P AL T++A AL L +S T
Sbjct: 761 VSSFLGRPN-FVHTANPTLGSFKFFTLQPQYYALNTASAIKNVALDLGSTLRSGTNL--- 816
Query: 532 TYSYAMGILSHFLG 573
YSY +LS+FLG
Sbjct: 817 VYSYNNALLSYFLG 830
[18][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 60.8 bits (146), Expect = 7e-08
Identities = 45/192 (23%), Positives = 85/192 (44%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + +++STT + PH +
Sbjct: 56 WITAGLVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 114
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG ++ FS T F P L + E +AD FV+E YA +
Sbjct: 115 HKNGTTSCDIDYGELCGHAMWFSTTTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 174
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + L T++A L +++ + Y+
Sbjct: 175 AKTFLGRPNFI-YSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYN 233
Query: 541 YAMGILSHFLGV 576
Y +LS++LG+
Sbjct: 234 YNNTLLSYYLGI 245
[19][TOP]
>UniRef100_A0A9J6 Polyprotein P2 123kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J6_ARMV
Length = 1122
Score = 60.5 bits (145), Expect = 9e-08
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 6/198 (3%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + ++++TT + PH +
Sbjct: 658 WIAAGLVMPDFKVVIRYPANAFTGLTWVMSFDAYNRITSSITTTASPTYTLSV-PHWLLH 716
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T T +D+ + CG ++ FS T F P L + +AD FV+E YA +
Sbjct: 717 HKNGTTTCEVDYGKLCGHAMWFSTTTFETPKLHFTCLTGNNKALAADWEFVVELYAEFE- 775
Query: 361 IVRGLATDSVLTYP-----IGPESLSDLDMVLSPTQLALGTSAA-TALPLTLAEKSVTTS 522
A DS L P G S L P AL T AA ++PL L + +++
Sbjct: 776 -----AADSFLGKPNFVHRNGAFEGSFEYFTLPPLNYALNTIAAYKSIPLNLGQ-TLSDG 829
Query: 523 GIETYSYAMGILSHFLGV 576
+ Y++ +LS++LG+
Sbjct: 830 TSKVYNFNNTLLSYYLGL 847
[20][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 60.1 bits (144), Expect = 1e-07
Identities = 45/192 (23%), Positives = 84/192 (43%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + +++ A F G FDA+ + +++ST V + PH +
Sbjct: 645 WITAGLVMPEFKVVVRYPANAFTGITWVMSFDAYDRITSSIST-VASPTYTLSVPHWLLH 703
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG ++ F+ T F P L + E +AD FV+E YA +
Sbjct: 704 HKNGTTSCEIDYGTLCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 763
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + LGT++A L +++ + Y+
Sbjct: 764 AKTFLGKPNFI-YSADAFNGSFKFLTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYN 822
Query: 541 YAMGILSHFLGV 576
Y +LS +LG+
Sbjct: 823 YNNTLLSFYLGI 834
[21][TOP]
>UniRef100_P24819 Coat protein (Fragment) n=1 Tax=Arabis mosaic virus RepID=POL2_ARMV
Length = 506
Score = 60.1 bits (144), Expect = 1e-07
Identities = 44/192 (22%), Positives = 84/192 (43%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + N +++ A F G FDA+ + +++STT + PH +
Sbjct: 41 WITAGIVMPNFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 99
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + LD+ CG ++ F T F P L + E +AD FV+E YA +
Sbjct: 100 HKNGTTSCDLDYGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 159
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + + S + + P + L ++A L +++ + Y+
Sbjct: 160 AKSFLGKPNFI-YSLDAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYN 218
Query: 541 YAMGILSHFLGV 576
+ +LS++LG+
Sbjct: 219 FNNTLLSYYLGI 230
[22][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 58.5 bits (140), Expect = 4e-07
Identities = 43/192 (22%), Positives = 84/192 (43%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + ++++TT + PH +
Sbjct: 40 WITAGLVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSITTTASPAYTLSV-PHWLLH 98
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG ++ F+ T F P L + E +AD FV+E YA +
Sbjct: 99 HKNGTTSCDIDYGELCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 158
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + Y + S + + P + L T++A L +++ + Y+
Sbjct: 159 AKTFLGRPN-FVYSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYN 217
Query: 541 YAMGILSHFLGV 576
Y +LS++LG+
Sbjct: 218 YNNTLLSYYLGI 229
[23][TOP]
>UniRef100_Q9QRA4 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA4_9SECO
Length = 562
Score = 58.5 bits (140), Expect = 4e-07
Identities = 51/195 (26%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG +NV S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + KP ++ + S + AD F +
Sbjct: 106 ISLADGPMVTWTFDIGRLCGHGLYYSEGAYAKPKIYFLILSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 166 DHTFSNSFGAVPFITLPHIFNKL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 224
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 225 STLNANQALLRFFQG 239
[24][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 58.5 bits (140), Expect = 4e-07
Identities = 43/192 (22%), Positives = 84/192 (43%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + ++++TT + PH +
Sbjct: 645 WITAGLVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSITTTASPAYTLSV-PHWLLH 703
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG ++ F+ T F P L + E +AD FV+E YA +
Sbjct: 704 HKNGTTSCDIDYGELCGHAMWFNATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 763
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + Y + S + + P + L T++A L +++ + Y+
Sbjct: 764 AKTFLGRPN-FVYSADAFNGSFKFLTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYN 822
Query: 541 YAMGILSHFLGV 576
Y +LS++LG+
Sbjct: 823 YNNTLLSYYLGI 834
[25][TOP]
>UniRef100_A3FEN3 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=A3FEN3_9SECO
Length = 562
Score = 58.2 bits (139), Expect = 5e-07
Identities = 51/195 (26%), Positives = 74/195 (37%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG NV S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDPNVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L + + KP ++ + S + AD F +
Sbjct: 106 ISLADGPVVTWTFDIGRLCGHGLYYPEGAYSKPKIYFLILSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P + L D+ PT++ L T A A L + + G+
Sbjct: 166 DYSFSNSFGAVPFITLPHKFDRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTAISGGM 224
Query: 529 ETYSYAMGILSHFLG 573
T S +L F G
Sbjct: 225 STLSSNQALLRFFQG 239
[26][TOP]
>UniRef100_A3FEN2 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=A3FEN2_9SECO
Length = 562
Score = 57.8 bits (138), Expect = 6e-07
Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG +NV S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 106 ISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLILSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 166 DHTFSNSFGAVPFITLPHVFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 224
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 225 STLNANQALLRFFQG 239
[27][TOP]
>UniRef100_A3FEM9 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=A3FEM9_9SECO
Length = 562
Score = 57.8 bits (138), Expect = 6e-07
Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG +NV S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 106 ISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLILSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 166 DHTFSNSFGAVPFITLPHVFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 224
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 225 STLNANQALLRFFQG 239
[28][TOP]
>UniRef100_Q65030 Coat protein n=1 Tax=Arabis mosaic virus (isolate Syrah)
RepID=POL2_ARMVS
Length = 1131
Score = 57.8 bits (138), Expect = 6e-07
Identities = 43/192 (22%), Positives = 84/192 (43%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + +++STT + PH +
Sbjct: 666 WITAGLVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 724
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + +D+ CG ++ FS T F P L + E +AD FV+E YA +
Sbjct: 725 HKNGTTSCDIDYGELCGHAMWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 784
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + L ++A L +++ + Y+
Sbjct: 785 AKSFLGKPNFI-YSADAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYN 843
Query: 541 YAMGILSHFLGV 576
+ +LS++LG+
Sbjct: 844 FNNTLLSYYLGI 855
[29][TOP]
>UniRef100_UPI0000164A21 capsid protein n=1 Tax=Tomato ringspot virus RepID=UPI0000164A21
Length = 562
Score = 57.4 bits (137), Expect = 8e-07
Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG +NV S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 106 ISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLVLSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 166 DHTFSNSFGAVPFITLPHIFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 224
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 225 STLNANQALLRFFQG 239
[30][TOP]
>UniRef100_P25247 Coat protein n=2 Tax=Tomato ringspot virus RepID=POL2_TORVR
Length = 1882
Score = 57.4 bits (137), Expect = 8e-07
Identities = 50/195 (25%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG +NV S V+L S+ L V
Sbjct: 1368 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEV 1425
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 1426 ISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLVLSDNDVPAEADWQFTYQLLFE 1485
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 1486 DHTFSNSFGAVPFITLPHIFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 1544
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 1545 STLNANQALLRFFQG 1559
[31][TOP]
>UniRef100_Q65029 Polyprotein P2' 119kDa n=1 Tax=Arabis mosaic virus RepID=Q65029_ARMV
Length = 1084
Score = 57.0 bits (136), Expect = 1e-06
Identities = 43/192 (22%), Positives = 83/192 (43%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + +++STT + PH +
Sbjct: 619 WITAGIVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 677
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + LD+ CG ++ F T F P L + E +AD FV+E YA +
Sbjct: 678 HKNGTTSCDLDYGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 737
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + L ++A L +++ + Y+
Sbjct: 738 AKSFLGKPNFI-YSADAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYN 796
Query: 541 YAMGILSHFLGV 576
+ +LS++LG+
Sbjct: 797 FNNTLLSYYLGI 808
[32][TOP]
>UniRef100_Q65028 Polyprotein (Fragment) n=1 Tax=Arabis mosaic virus
RepID=Q65028_ARMV
Length = 737
Score = 56.6 bits (135), Expect = 1e-06
Identities = 43/192 (22%), Positives = 83/192 (43%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCPHVQIL 180
W+ G + + +++ A F G FDA+ + +++STT + PH +
Sbjct: 272 WITAGIVMPDFKVVIRYPANAFTGITWVMSFDAYNRITSSISTTASPAYTLSV-PHWLLH 330
Query: 181 KDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGDR 360
+ T + LD+ CG ++ F T F P L + E +AD FV+E YA +
Sbjct: 331 HRNGTTSCDLDYGELCGHAMWFGATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEA 390
Query: 361 IVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTSAATALPLTLAEKSVTTSGIETYS 540
L + + Y + S + + P + L ++A L +++ + Y+
Sbjct: 391 AKSFLGKPNFI-YSADAFNGSLKYLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYN 449
Query: 541 YAMGILSHFLGV 576
+ +LS++LG+
Sbjct: 450 FNNTLLSYYLGI 461
[33][TOP]
>UniRef100_Q9YPA2 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9YPA2_9SECO
Length = 564
Score = 55.8 bits (133), Expect = 2e-06
Identities = 49/195 (25%), Positives = 74/195 (37%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG +NV S V+L S+ L V
Sbjct: 50 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSNVLGASFPVKLASL--LPTEV 107
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 108 ISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLILSDNDVPAEADWQFTYQLLFE 167
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L + + +
Sbjct: 168 DHTFSNSFGAVPFITLPHIFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTAISGNM 226
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 227 STLNANQALLRFFQG 241
[34][TOP]
>UniRef100_Q9QRA5 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA5_9SECO
Length = 562
Score = 55.5 bits (132), Expect = 3e-06
Identities = 45/193 (23%), Positives = 69/193 (35%), Gaps = 2/193 (1%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNVSTTVELESVRHLCP-HVQI 177
W G++ LRL + F G ++ DAF N+ V ++ +L P V
Sbjct: 48 WQRQGFVHGELRLRCFIPTNIFCGHSMMCTLDAFNRYDPNIMGAVFPVTLANLLPTEVIS 107
Query: 178 LKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYATGD 357
L D TW D R CG L + + P ++ + S + AD F +
Sbjct: 108 LSDGPEVTWTFDIGRLCGHGLYYMEGAYSSPKIYFLILSDNDVPAEADWQFTYHLHFEDH 167
Query: 358 RIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTS-AATALPLTLAEKSVTTSGIET 534
+T P L D+ PT++ L + A L SV G+ T
Sbjct: 168 SFSNSFGAVPFITLPHTFNRL-DVGYWRGPTEIELSANPLPNAYKLLFGLSSVIYEGVTT 226
Query: 535 YSYAMGILSHFLG 573
+ +L F G
Sbjct: 227 LNANQALLRFFQG 239
[35][TOP]
>UniRef100_Q9QRA3 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA3_9SECO
Length = 562
Score = 55.5 bits (132), Expect = 3e-06
Identities = 49/195 (25%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG ++V S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSSVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 106 ISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLILSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 166 DHTFSNSFGAVPFITLPHIFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 224
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 225 STLNANQALLRFFQG 239
[36][TOP]
>UniRef100_Q9QRA2 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
RepID=Q9QRA2_9SECO
Length = 562
Score = 55.1 bits (131), Expect = 4e-06
Identities = 49/195 (25%), Positives = 75/195 (38%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAFG ++V S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFGRYDSSVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 106 ISLADGPEVTWTFDIGRLCGHGLYYSEGAYARPKIYFLILSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 166 DHTFSNSFGAVPFITLPHIFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 224
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 225 STLNANQALLRFFQG 239
[37][TOP]
>UniRef100_A3FEN0 Coat protein (Fragment) n=2 Tax=Tomato ringspot virus
RepID=A3FEN0_9SECO
Length = 562
Score = 55.1 bits (131), Expect = 4e-06
Identities = 49/195 (25%), Positives = 74/195 (37%), Gaps = 4/195 (2%)
Frame = +1
Query: 1 WLEMGYIDRNLRLISHLSAGPFLGAAVWFVFDAFGHMPTNV---STTVELESVRHLCPHV 171
W G++ LRL + F G ++ DAF +NV S V+L S+ L V
Sbjct: 48 WQRQGFLHGKLRLRCFIPTNIFCGHSMMCSLDAFDRYDSNVLGASFPVKLASL--LPTEV 105
Query: 172 QILKDSTTDTWVLDFHRFCGQSLSFSGTGFLKPTLWVISASSAQLECSADVAFVLEAYAT 351
L D TW D R CG L +S + +P ++ + S + AD F +
Sbjct: 106 ISLADGPVVTWTFDIGRLCGHGLYYSEGAYARPKIYFLILSDNDVPAEADWQFTYQLLFE 165
Query: 352 GDRIVRGLATDSVLTYPIGPESLSDLDMVLSPTQLAL-GTSAATALPLTLAEKSVTTSGI 528
+T P L D+ PT++ L T A A L +V + +
Sbjct: 166 DHTFSNSFGAVPFITLPHVFNRL-DIGYWRGPTEIDLTSTPAPNAYRLLFGLSTVISGNM 224
Query: 529 ETYSYAMGILSHFLG 573
T + +L F G
Sbjct: 225 STLNANQALLRFFQG 239