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[1][TOP]
>UniRef100_A5BI33 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A5BI33_VITVI
Length = 254
Score = 319 bits (818), Expect = 8e-86
Identities = 159/192 (82%), Positives = 169/192 (88%)
Frame = +3
Query: 3 KSGMTPATYTPSPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFG 182
KS TP+TY+PSP K+P DW RPDGRGFHQCRPAF +TGAVNAASGSAYAEFG
Sbjct: 4 KSAATPSTYSPSPAPKTKRPIFQDVDWVRPDGRGFHQCRPAFLKTGAVNAASGSAYAEFG 63
Query: 183 NTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALEGA 362
NTKVIVSVFGPRESKKAM YS TGRLNCNVSYTTF+ P+RGQGSDHK YSSML KALEGA
Sbjct: 64 NTKVIVSVFGPRESKKAMAYSGTGRLNCNVSYTTFAMPIRGQGSDHKGYSSMLHKALEGA 123
Query: 363 IILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLI 542
II+ESFPKTTVDVFALVLES GSDLPVVIS ASLALADAGI+MYDLV SVSVSCLGKNL+
Sbjct: 124 IIVESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLGKNLV 183
Query: 543 IDPISEEENCQD 578
IDPI EEE+ QD
Sbjct: 184 IDPILEEESYQD 195
[2][TOP]
>UniRef100_B9HQC2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HQC2_POPTR
Length = 257
Score = 304 bits (779), Expect = 3e-81
Identities = 152/193 (78%), Positives = 168/193 (87%), Gaps = 3/193 (1%)
Frame = +3
Query: 9 GMTPATYTPSPTTGKKKPAIIKE---DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEF 179
G P TYTP+PT ++ + + DW RPDGRGFHQCRPAFFRTGAVN+A+GSAYAEF
Sbjct: 6 GAAPGTYTPTPTKKTQRSSFFSDSDVDWLRPDGRGFHQCRPAFFRTGAVNSAAGSAYAEF 65
Query: 180 GNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALEG 359
GNTKVIVSVFGPRESKKAM+YSD GRLNCNVS TTF+TP RG GSD+KE+SSML KALEG
Sbjct: 66 GNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSCTTFATPARGLGSDNKEFSSMLHKALEG 125
Query: 360 AIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNL 539
AI+LE+FPKTTVDVFALVLES GSDLPVVIS ASLALADAGI+MYDLV VSVSCLG+NL
Sbjct: 126 AIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSVSCLGRNL 185
Query: 540 IIDPISEEENCQD 578
IIDPI EEE+ QD
Sbjct: 186 IIDPILEEESFQD 198
[3][TOP]
>UniRef100_A9PJ38 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJ38_9ROSI
Length = 257
Score = 304 bits (779), Expect = 3e-81
Identities = 152/193 (78%), Positives = 168/193 (87%), Gaps = 3/193 (1%)
Frame = +3
Query: 9 GMTPATYTPSPTTGKKKPAIIKE---DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEF 179
G P TYTP+PT ++ + + DW RPDGRGFHQCRPAFFRTGAVN+A+GSAYAEF
Sbjct: 6 GAAPGTYTPTPTKKTQRSSFFSDSDIDWLRPDGRGFHQCRPAFFRTGAVNSAAGSAYAEF 65
Query: 180 GNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALEG 359
GNTKVIVSVFGPRESKKAM+YSD GRLNCNVS TTF+TP RG GSD+KE+SSML KALEG
Sbjct: 66 GNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSCTTFATPARGLGSDNKEFSSMLHKALEG 125
Query: 360 AIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNL 539
AI+LE+FPKTTVDVFALVLES GSDLPVVIS ASLALADAGI+MYDLV VSVSCLG+NL
Sbjct: 126 AIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSVSCLGRNL 185
Query: 540 IIDPISEEENCQD 578
IIDPI EEE+ QD
Sbjct: 186 IIDPILEEESFQD 198
[4][TOP]
>UniRef100_A9PH32 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PH32_POPTR
Length = 257
Score = 298 bits (764), Expect = 2e-79
Identities = 150/193 (77%), Positives = 166/193 (86%), Gaps = 3/193 (1%)
Frame = +3
Query: 9 GMTPATYTPSPTTGKKKPAIIKE---DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEF 179
G P TYTP+PT ++ + + DW RPDGR F QCRPAFFRTGAVN+A+GSAYAEF
Sbjct: 6 GAAPGTYTPTPTKKTQRSSFFSDSDVDWLRPDGRDFQQCRPAFFRTGAVNSAAGSAYAEF 65
Query: 180 GNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALEG 359
GNTKVIVSVFGPRESKKAM+YSD GRLNCNVS TTF+TP RG GSD+KE+SSML KALEG
Sbjct: 66 GNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSCTTFATPARGLGSDNKEFSSMLHKALEG 125
Query: 360 AIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNL 539
AI+LE+FPKTTVDVFALVLES GSDLPVVIS ASLALADAGI+MYDLV VSVSCLG+NL
Sbjct: 126 AIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVSVSCLGRNL 185
Query: 540 IIDPISEEENCQD 578
IIDPI EEE+ QD
Sbjct: 186 IIDPILEEESFQD 198
[5][TOP]
>UniRef100_B9MZ65 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9MZ65_POPTR
Length = 263
Score = 296 bits (758), Expect = 8e-79
Identities = 150/201 (74%), Positives = 169/201 (84%), Gaps = 9/201 (4%)
Frame = +3
Query: 3 KSGMTPATYTPSP------TTGKKKPAIIKE---DWTRPDGRGFHQCRPAFFRTGAVNAA 155
K G P+TYTP+P T ++P + DWTR DGRGFHQCR AFFRTGAVN+A
Sbjct: 4 KGGAAPSTYTPTPAPTPTPTKKAQRPPFFTDSDVDWTRSDGRGFHQCRSAFFRTGAVNSA 63
Query: 156 SGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSS 335
+GSAYAEFGNTKVIVSVFGPRESKKAM+YSD G+LNCNVSYTTF+T V GQGSD+KE+S+
Sbjct: 64 AGSAYAEFGNTKVIVSVFGPRESKKAMMYSDKGKLNCNVSYTTFATTVHGQGSDNKEFST 123
Query: 336 MLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVS 515
ML KALEGA++LE+FPKTTVDVFALVLES GSDLPVVIS ASLALADAGI+MYDLV VS
Sbjct: 124 MLHKALEGAVMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAGVS 183
Query: 516 VSCLGKNLIIDPISEEENCQD 578
VSCLG+NLIIDP EEE+ QD
Sbjct: 184 VSCLGRNLIIDPTLEEESFQD 204
[6][TOP]
>UniRef100_A2RVK7 At4g27490 n=1 Tax=Arabidopsis thaliana RepID=A2RVK7_ARATH
Length = 256
Score = 290 bits (742), Expect = 6e-77
Identities = 142/195 (72%), Positives = 167/195 (85%), Gaps = 3/195 (1%)
Frame = +3
Query: 3 KSGMTPATYTPSPTTGKKKPAIIKE---DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYA 173
K G TY+P G+ + I K+ DW+RPDGRGFHQCRPA +TGAV++ASGSAYA
Sbjct: 4 KPGAATPTYSPK-IVGRSRLPIFKDSDLDWSRPDGRGFHQCRPALLQTGAVSSASGSAYA 62
Query: 174 EFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKAL 353
EFGNTKVIVSVFGPRESKKAM+YSD GRLNCNVSYT F++P GQG+DHKEYSSML KAL
Sbjct: 63 EFGNTKVIVSVFGPRESKKAMVYSDVGRLNCNVSYTNFASPTLGQGTDHKEYSSMLHKAL 122
Query: 354 EGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGK 533
EG I++E+FPKTTVDVFALVLES GSDL V+IS ASLALADAGI+MYDL+T+VSVSC+GK
Sbjct: 123 EGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVSVSCIGK 182
Query: 534 NLIIDPISEEENCQD 578
+L+IDP++EEE C+D
Sbjct: 183 SLMIDPVTEEEGCED 197
[7][TOP]
>UniRef100_Q75LC8 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=Q75LC8_ORYSJ
Length = 260
Score = 286 bits (732), Expect = 8e-76
Identities = 143/197 (72%), Positives = 162/197 (82%), Gaps = 9/197 (4%)
Frame = +3
Query: 15 TPATYTPSPTTGKKKPAIIKE---------DWTRPDGRGFHQCRPAFFRTGAVNAASGSA 167
T TY+P+ G+K+ +E DW R DGR FH CRPAF +TG AASGSA
Sbjct: 6 TAGTYSPASAAGEKRRERKEELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTTAASGSA 65
Query: 168 YAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQK 347
YAEFG TKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTF+TP+RGQG+D+KEYS+ML K
Sbjct: 66 YAEFGKTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFATPIRGQGTDNKEYSAMLHK 125
Query: 348 ALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL 527
ALEGA++L +FPKTTVDVFALVLES GSDLP++IS ASLALADAGI+MYDLVTSVSVSC
Sbjct: 126 ALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMMYDLVTSVSVSCF 185
Query: 528 GKNLIIDPISEEENCQD 578
GKN+IIDP S+EE QD
Sbjct: 186 GKNIIIDPTSDEEAWQD 202
[8][TOP]
>UniRef100_A2XNZ0 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=A2XNZ0_ORYSI
Length = 260
Score = 285 bits (730), Expect = 1e-75
Identities = 143/197 (72%), Positives = 162/197 (82%), Gaps = 9/197 (4%)
Frame = +3
Query: 15 TPATYTPSPTTGKKKPAIIKE---------DWTRPDGRGFHQCRPAFFRTGAVNAASGSA 167
T TY+P+ G+K+ +E DW R DGR FH CRPAF +TG AASGSA
Sbjct: 6 TAGTYSPASAAGEKRRERKEELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTTAASGSA 65
Query: 168 YAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQK 347
YAEFG TKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTF+TP+RGQG+D+KEYS+ML K
Sbjct: 66 YAEFGKTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFATPMRGQGTDNKEYSAMLHK 125
Query: 348 ALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL 527
ALEGA++L +FPKTTVDVFALVLES GSDLP++IS ASLALADAGI+MYDLVTSVSVSC
Sbjct: 126 ALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMMYDLVTSVSVSCF 185
Query: 528 GKNLIIDPISEEENCQD 578
GKN+IIDP S+EE QD
Sbjct: 186 GKNIIIDPTSDEEAWQD 202
[9][TOP]
>UniRef100_Q69UI6 Os08g0116800 protein n=2 Tax=Oryza sativa RepID=Q69UI6_ORYSJ
Length = 262
Score = 284 bits (726), Expect = 4e-75
Identities = 142/197 (72%), Positives = 161/197 (81%), Gaps = 9/197 (4%)
Frame = +3
Query: 15 TPATYTPSPTTGKKKPAIIKE---------DWTRPDGRGFHQCRPAFFRTGAVNAASGSA 167
T TY+P+ G+K+ +E DW R DGR FH CRPAF +TG AASGSA
Sbjct: 8 TDGTYSPAAAAGEKRRERKEELRRHLAEDADWPRADGRSFHDCRPAFMQTGPTTAASGSA 67
Query: 168 YAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQK 347
YAEFG TKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTF+TP+RGQG D+KEYS+ML K
Sbjct: 68 YAEFGKTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFATPIRGQGMDNKEYSAMLHK 127
Query: 348 ALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL 527
ALEGA++L +FPKTTVDVFALVLES GSDLP++IS ASLALADAGI++YDLVTSVSVSC
Sbjct: 128 ALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMIYDLVTSVSVSCF 187
Query: 528 GKNLIIDPISEEENCQD 578
GKN+IIDP S+EE QD
Sbjct: 188 GKNIIIDPTSDEEAWQD 204
[10][TOP]
>UniRef100_C5X376 Putative uncharacterized protein Sb02g040250 n=1 Tax=Sorghum
bicolor RepID=C5X376_SORBI
Length = 261
Score = 281 bits (720), Expect = 2e-74
Identities = 142/194 (73%), Positives = 159/194 (81%), Gaps = 9/194 (4%)
Frame = +3
Query: 24 TYTPSPTTGKKKPAIIKE---------DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAE 176
TY+P+ G K+ +E DW R DGR FH CRPAF +TG AASGSAYAE
Sbjct: 9 TYSPAVAAGDKRRERKEELRRHLVEDADWPRADGRSFHDCRPAFMQTGPTTAASGSAYAE 68
Query: 177 FGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALE 356
FG TKVIVSVFGPRESKKAM+YSD GRLNCNVSYTTF+TPVRGQG+D+KEYSSML KALE
Sbjct: 69 FGKTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGADNKEYSSMLYKALE 128
Query: 357 GAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKN 536
GA++L +FPKTTVDVFALVLES GSDLP++IS ASLALADAGI+MYDLVTSVSVSC GKN
Sbjct: 129 GAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMMYDLVTSVSVSCFGKN 188
Query: 537 LIIDPISEEENCQD 578
+IIDP S+EE QD
Sbjct: 189 IIIDPTSDEEAWQD 202
[11][TOP]
>UniRef100_B9SVB2 Exosome complex exonuclease RRP41, putative n=1 Tax=Ricinus
communis RepID=B9SVB2_RICCO
Length = 180
Score = 270 bits (690), Expect = 6e-71
Identities = 136/175 (77%), Positives = 151/175 (86%), Gaps = 3/175 (1%)
Frame = +3
Query: 3 KSGMTPATYTPSPTTGKKKPAIIKE---DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYA 173
K G P TY+P+P+ K +P I K DW RPDGR F +CRPA+FRTGAVNAA+GSAYA
Sbjct: 4 KPGSAPTTYSPTPSR-KSRPPIFKHYDVDWVRPDGRSFSECRPAYFRTGAVNAAAGSAYA 62
Query: 174 EFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKAL 353
EFGNTKVIVSVFGPRESKKAM+YSD GRLNCNVSYTTFSTPVRGQGSD KE+SSML K+L
Sbjct: 63 EFGNTKVIVSVFGPRESKKAMMYSDVGRLNCNVSYTTFSTPVRGQGSDCKEFSSMLHKSL 122
Query: 354 EGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSV 518
EGAI+LE+FPKTTVDVFALVLES GSDL V++S ASLALADAGI+MYDLV VSV
Sbjct: 123 EGAIMLETFPKTTVDVFALVLESGGSDLSVIVSCASLALADAGIMMYDLVAGVSV 177
[12][TOP]
>UniRef100_C0PA26 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PA26_MAIZE
Length = 209
Score = 244 bits (624), Expect = 3e-63
Identities = 122/149 (81%), Positives = 135/149 (90%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQG 311
+TG AASGSAYAEFG TKVIVSVFGPRESKKAM+YSD GRLNCNVSYTTF+TPVRGQG
Sbjct: 2 QTGPTTAASGSAYAEFGKTKVIVSVFGPRESKKAMMYSDVGRLNCNVSYTTFATPVRGQG 61
Query: 312 SDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILM 491
+D+KEYSSML KALEGA++L +FPKTTVDVFALVLES GSDLP++IS ASLALADAGI+M
Sbjct: 62 ADNKEYSSMLHKALEGAVMLHTFPKTTVDVFALVLESGGSDLPIIISCASLALADAGIMM 121
Query: 492 YDLVTSVSVSCLGKNLIIDPISEEENCQD 578
YDLVTSVSVSC KN+IIDP S+EE QD
Sbjct: 122 YDLVTSVSVSCFRKNIIIDPTSDEEAWQD 150
[13][TOP]
>UniRef100_Q9SZS4 Putative uncharacterized protein F27G19.90 n=1 Tax=Arabidopsis
thaliana RepID=Q9SZS4_ARATH
Length = 244
Score = 149 bits (377), Expect = 1e-34
Identities = 95/232 (40%), Positives = 118/232 (50%), Gaps = 40/232 (17%)
Frame = +3
Query: 3 KSGMTPATYTPSPTTGKKKPAIIKE---DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYA 173
K G TY+P G+ + I K+ DW+RPDGRGFHQCRPA T
Sbjct: 4 KPGAATPTYSPK-IVGRSRLPIFKDSDLDWSRPDGRGFHQCRPACKNT------------ 50
Query: 174 EFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKAL 353
F ++K ++ G+DHKEYSSML KAL
Sbjct: 51 -FDSSKFLI------------------------------------GTDHKEYSSMLHKAL 73
Query: 354 EGAIILESFPKTTVDVFALVLESSGS---------------------------------- 431
EG I++E+FPKTTVDVFALVLES G
Sbjct: 74 EGVIMMETFPKTTVDVFALVLESGGKCDCLLVRLDIRGVDYGSNLLDCCLAFSDFLQWYC 133
Query: 432 ---DLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
DL V+IS ASLALADAGI+MYDL+T+VSVSC+GK+L+IDP++EEE C+D
Sbjct: 134 IAGDLSVLISCASLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCED 185
[14][TOP]
>UniRef100_UPI0000D569CA PREDICTED: similar to exosomal 3-5 exoribonuclease complex subunit
Rrp41-like protein n=1 Tax=Tribolium castaneum
RepID=UPI0000D569CA
Length = 282
Score = 137 bits (345), Expect = 6e-31
Identities = 74/174 (42%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
I++ + TR DGR + R F +TG V+ A GSAY E TKVIVSVF PRE YS
Sbjct: 35 IVQPNGTRADGRTSTEHRKIFLKTGVVSQAKGSAYIELDQTKVIVSVFDPREIPNKTDYS 94
Query: 246 DTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVL 416
G + C + FS R Q ++ +++S+++++ALE A+ FP VD++A+VL
Sbjct: 95 SKGEIYCEFKFAPFSCHKRRLHQQDAEEQQFSAIMKQALESAVFRHEFPNFQVDIYAMVL 154
Query: 417 ESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN-CQ 575
+ G+ L I+ A +ALA AGI MYDL+TSV+++ G +L++DP EEE CQ
Sbjct: 155 HNDGAALSAAITAAGVALAHAGIPMYDLITSVTLAVQGNHLLVDPTLEEERLCQ 208
[15][TOP]
>UniRef100_UPI00016E06CA UPI00016E06CA related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E06CA
Length = 276
Score = 132 bits (332), Expect = 2e-29
Identities = 80/201 (39%), Positives = 115/201 (57%), Gaps = 16/201 (7%)
Frame = +3
Query: 15 TPATYTPSPTTGKKKPAIIKEDWTRPDGRGFHQC--RPAFFRTGAVNAASGSAYAEFGNT 188
+P+ + P G + R DGR Q RP F R G V+ A GSAY E GNT
Sbjct: 16 SPSLFVCQPADG------VSPQGPRADGRRRDQVDVRPVFVRCGLVSQAKGSAYIEAGNT 69
Query: 189 KVIVSVFGPRESKK-----------AMLYSDTGRLNCNVSYTTFSTPVRG---QGSDHKE 326
K++ V+GPRE+++ L++ +L ++ + FS P RG QGS K+
Sbjct: 70 KLMCCVYGPRETERKDETDMKCGRHVPLFTSMNKLTTDMRFAPFSCPERGSWIQGSQEKD 129
Query: 327 YSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVT 506
+S+MLQ++L+ A+ L +P++ ++V +VLE+SGS L I+ ASLALADAGI MYDLV
Sbjct: 130 FSTMLQESLQPAVCLHKYPRSQIEVNMMVLENSGSVLAHAITCASLALADAGIEMYDLVL 189
Query: 507 SVSVSCLGKNLIIDPISEEEN 569
S+ G + + DP S EEN
Sbjct: 190 GCSLRQNGASYVADPTSAEEN 210
[16][TOP]
>UniRef100_UPI000051A77B PREDICTED: similar to Mtr3 (mRNA transport regulator 3)-homolog
isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A77B
Length = 273
Score = 131 bits (329), Expect = 4e-29
Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 4/175 (2%)
Frame = +3
Query: 54 KKPAIIKEDWT-RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
KK IK D+ R D R ++ R F +TG V+ A GSAY E GNTKV+ SVF PRE
Sbjct: 25 KKSDKIKHDFNIRNDKRSNNEMRKIFLKTGIVSQAKGSAYIELGNTKVVCSVFDPRELSN 84
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDV 401
Y G + C + FS R Q ++ K+YS +LQ+ALE A+ L FP VDV
Sbjct: 85 RNGYCSQGEIYCEFKFAPFSCQKRKIHQQDAEEKQYSLILQRALEPAVCLHEFPNFQVDV 144
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+A+VL+++GS L I AS ALA+AG+ M+ LVT+ ++ + ++DP EE
Sbjct: 145 YAMVLDNAGSSLAAAIMAASTALANAGVPMFGLVTASTIGIYDNHYLMDPTDTEE 199
[17][TOP]
>UniRef100_C1E4G7 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E4G7_9CHLO
Length = 232
Score = 130 bits (328), Expect = 6e-29
Identities = 77/172 (44%), Positives = 107/172 (62%), Gaps = 12/172 (6%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM--LYSDTGRL 260
R DGR Q RP F +TG ++ A+GSAY E TKV+ V+GPR+ + + D GRL
Sbjct: 5 REDGRSAEQMRPIFVKTGVISQAAGSAYVELDKTKVMCGVYGPRQGGPGIDKVEFDRGRL 64
Query: 261 NCNVSYTTFSTP-VRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
+ +V TF+T RG QG +E+SS++ +AL GA++ E+FPKTTVDVFA VLE++G
Sbjct: 65 DVDVKLATFATSGPRGKVAQGDAEREFSSIVHRALSGAVMTETFPKTTVDVFATVLEANG 124
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLG------KNLIIDPISEEE 566
S+L I+ AS AL +AG+ M DLV+ +C G L++DP EE
Sbjct: 125 SELCATIAAASAALCEAGVAMRDLVS----ACTGGGADGPNALLLDPARGEE 172
[18][TOP]
>UniRef100_Q8GWJ0 Putative uncharacterized protein At4g27490/F27G19_90 n=1
Tax=Arabidopsis thaliana RepID=Q8GWJ0_ARATH
Length = 140
Score = 129 bits (324), Expect = 2e-28
Identities = 62/81 (76%), Positives = 75/81 (92%)
Frame = +3
Query: 336 MLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVS 515
ML KALEG I++E+FPKTTVDVFALVLES GSDL V+IS ASLALADAGI+MYDL+T+VS
Sbjct: 1 MLHKALEGVIMMETFPKTTVDVFALVLESGGSDLSVLISCASLALADAGIMMYDLITAVS 60
Query: 516 VSCLGKNLIIDPISEEENCQD 578
VSC+GK+L+IDP++EEE C+D
Sbjct: 61 VSCIGKSLMIDPVTEEEGCED 81
[19][TOP]
>UniRef100_A7RQ94 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQ94_NEMVE
Length = 268
Score = 129 bits (324), Expect = 2e-28
Identities = 72/169 (42%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
+I++D R DGR + RP F R G V+ A GSAY E NTKVI +++GPRE+ + +S
Sbjct: 29 LIRKDGCRQDGRRPDELRPMFLRAGVVSQAKGSAYIEMKNTKVICAIYGPREAPRRQEFS 88
Query: 246 DTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVL 416
GRL C + FS R Q ++ KE S ++ +ALE A+ LE FPK VD++ VL
Sbjct: 89 MKGRLTCEFKFAPFSCIYRRKHIQDAEEKENSYLVVQALEPAVCLEKFPKAQVDIYITVL 148
Query: 417 ESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEE 563
E+ GS L I AS+ALA AGI M DLV++ ++ ++++DP +E
Sbjct: 149 ENDGSALSAGIICASVALAMAGIEMLDLVSACTMVQSDNHILMDPCEKE 197
[20][TOP]
>UniRef100_UPI000180CDA2 PREDICTED: similar to Exosome complex exonuclease MTR3 (mRNA
transport regulator 3 homolog) (Exosome component 6) n=1
Tax=Ciona intestinalis RepID=UPI000180CDA2
Length = 276
Score = 128 bits (322), Expect = 3e-28
Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 5/186 (2%)
Frame = +3
Query: 24 TYTPSPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVS 203
+Y T +K +++ ++ R DGR Q R F + G + A GSAY E TKVI S
Sbjct: 14 SYNAKLFTEIEKLSLLDDEEKRADGRYVTQPRDVFLQCGVITQAKGSAYFEMNKTKVICS 73
Query: 204 VFGPRESKKAMLYS-DTGRLNCNVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIIL 371
V+GP++ + + + G+L C + Y +S+P G G+ E S +L +A+ + L
Sbjct: 74 VYGPKDIEMREEFQINKGKLKCELKYAPYSSPKHGDHIPGASDVEKSDILLEAISSGVCL 133
Query: 372 ESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKN-LIID 548
+ +PK+ +DV+ +VLE GS +P I+ AS+AL DAGI MYD++T+ S+ G++ IID
Sbjct: 134 QRYPKSQIDVYVIVLEDDGSVMPAAITAASVALVDAGIEMYDVITASSIRIAGQDTFIID 193
Query: 549 PISEEE 566
P S EE
Sbjct: 194 PTSSEE 199
[21][TOP]
>UniRef100_Q5TMQ4 AGAP011906-PA n=1 Tax=Anopheles gambiae RepID=Q5TMQ4_ANOGA
Length = 308
Score = 127 bits (319), Expect = 6e-28
Identities = 75/181 (41%), Positives = 105/181 (58%), Gaps = 3/181 (1%)
Frame = +3
Query: 33 PSPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFG 212
P P + + A+ K D R DGR + R + + G V+ A GSAY E GNTKVIVSVF
Sbjct: 26 PKPFDERLQEALGK-DGKRKDGRRLQESRKYYAKIGVVSTAKGSAYVELGNTKVIVSVFD 84
Query: 213 PRESKKAMLYSDTGRLNCNVSYTTFSTPVR-GQGSDHKEYS--SMLQKALEGAIILESFP 383
PRE K + + G L C++ ++ F+ VR +D +E S + L AL ++ FP
Sbjct: 85 PREIPKQNKFCELGELFCDLKFSPFAPAVRKTHQTDARERSMTAALTSALNPSVCRHLFP 144
Query: 384 KTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEE 563
+DVFA VLE GS L V I+ A LAL DA + M+D+VT+ + LG +++DP +EE
Sbjct: 145 NLQIDVFANVLEDDGSALAVAITAAGLALGDACVPMFDIVTAATAGVLGDRVVMDPTAEE 204
Query: 564 E 566
E
Sbjct: 205 E 205
[22][TOP]
>UniRef100_UPI00015B4338 PREDICTED: similar to exosomal 3-5 exoribonuclease complex subunit
Rrp41-like protein n=1 Tax=Nasonia vitripennis
RepID=UPI00015B4338
Length = 284
Score = 126 bits (317), Expect = 1e-27
Identities = 73/173 (42%), Positives = 99/173 (57%), Gaps = 3/173 (1%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 236
K +I E TR D R + R F + G V+ A GSAY E G TKVI S F PRE
Sbjct: 29 KSSIKNELKTRVDSRKHKELRKMFIKLGVVSQAKGSAYIEMGQTKVICSAFDPREIPNKT 88
Query: 237 LYSDTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFA 407
YS G + C + +F+T R Q ++ KEYS ++Q+ALE A+ FP VDV+A
Sbjct: 89 SYSTQGEIFCEFKFASFATCKRKGHQQDTEEKEYSLIMQRALEPAVCRHEFPNFQVDVYA 148
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
LVL++ GS L I ASLALA+A + M+ +VT+V+ L++DP +EE
Sbjct: 149 LVLDNGGSALGAAIMGASLALANASVPMFGIVTAVTAGIYDDLLLLDPTDKEE 201
[23][TOP]
>UniRef100_UPI0001925525 PREDICTED: similar to predicted protein n=1 Tax=Hydra
magnipapillata RepID=UPI0001925525
Length = 258
Score = 125 bits (315), Expect = 2e-27
Identities = 73/188 (38%), Positives = 105/188 (55%), Gaps = 6/188 (3%)
Frame = +3
Query: 18 PATYTPSPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVI 197
P P + K K R DGRG ++ RP + + G ++ A+GS+Y E +TK+I
Sbjct: 12 PQETLPLTSLSCKVTTSTKSSSQRQDGRGENEIRPMYLKAGTIHQANGSSYVETCDTKLI 71
Query: 198 VSVFGPRESKKAMLYSDTGRLNCNVSYTTFS--TPVRGQGSDHKEYSSMLQKALEGAIIL 371
+V+GPR++ K +S G + C V++ FS V Q S KEYSS + +A E A+ L
Sbjct: 72 CAVYGPRDNPKRHQFSSKGNIFCEVTFAPFSWHERVSNQDSLSKEYSSAIVQAFESAVCL 131
Query: 372 ESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLI--- 542
ES+PK +D++ +LE SG+ L AS+ALADAGI M DLVTS + + I
Sbjct: 132 ESYPKAQIDIYINILEYSGNCLSYAFIAASIALADAGIEMLDLVTSCESAFSNETSIQRV 191
Query: 543 -IDPISEE 563
+DP EE
Sbjct: 192 CVDPSGEE 199
[24][TOP]
>UniRef100_UPI00017B5285 UPI00017B5285 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B5285
Length = 248
Score = 124 bits (312), Expect = 4e-27
Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 8/186 (4%)
Frame = +3
Query: 33 PSPTTGKKKPAIIKEDW--TRPDGRGFHQC--RPAFFRTGAVNAASGSAYAEFGNTKVIV 200
P+ T + P + + W R DGR Q RP F R G + A GSAY E G TK++
Sbjct: 2 PTDTRRVRGPELSQSPWLFVRADGRQREQADVRPVFVRCGLGSQAKGSAYMEAGATKLLC 61
Query: 201 SVFGPRES-KKAMLYSDTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAII 368
V+GPRE+ +K GRL +V + FS P RG QGS +++SSML ++L+ A+
Sbjct: 62 CVYGPRETERKDETDMRCGRLTADVRFAPFSCPERGSWIQGSQDRDFSSMLLESLQPAVC 121
Query: 369 LESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L +P++ ++V +VLE+ GS L ++ AS+ALADAGI MYDLV S+ G + + D
Sbjct: 122 LHRYPRSQIEVHLVVLENGGSVLAHAVTCASVALADAGIQMYDLVLGCSLRQDGASFVAD 181
Query: 549 PISEEE 566
P EE
Sbjct: 182 PTYAEE 187
[25][TOP]
>UniRef100_UPI000186F240 conserved hypothetical protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186F240
Length = 278
Score = 123 bits (309), Expect = 9e-27
Identities = 70/170 (41%), Positives = 97/170 (57%), Gaps = 3/170 (1%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
I+ + R DGR F R + +TG V A GSAY E NTKV+VSVF PRE + ++
Sbjct: 35 ILDNNKIRKDGRTFEDQRKIYMKTGVVTQAKGSAYLELNNTKVLVSVFEPREIPRLSEFT 94
Query: 246 DTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVL 416
G + C + F R + K+ S +L+++LE A+ FP VDV+AL+L
Sbjct: 95 PNGEIYCEFKFAPFYGLERKGHIMDLEEKDLSIILKRSLEPAVCRHEFPNFQVDVYALLL 154
Query: 417 ESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
++ GS L I+ A LALADAGI MYD++TSV++ + IDP EEE
Sbjct: 155 DNDGSCLSAAITAAGLALADAGIPMYDILTSVTLGIHNDMIFIDPNFEEE 204
[26][TOP]
>UniRef100_Q4T603 Chromosome undetermined SCAF9013, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4T603_TETNG
Length = 276
Score = 121 bits (303), Expect = 4e-26
Identities = 77/185 (41%), Positives = 107/185 (57%), Gaps = 7/185 (3%)
Frame = +3
Query: 36 SPTTGKKKPA-IIKEDWTRPDGRGFHQC--RPAFFRTGAVNAASGSAYAEFGNTKVIVSV 206
SP +KPA R DGR Q RP F R G + A GSAY E G TK++ V
Sbjct: 16 SPWLFVRKPADAAPPPGPRADGRQREQADVRPVFVRCGLGSQAKGSAYMEAGATKLLCCV 75
Query: 207 FGPRES-KKAMLYSDTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILE 374
+GPRE+ +K GRL +V + FS P RG QGS +++SSML ++L+ A+ L
Sbjct: 76 YGPRETERKDETDMRCGRLTADVRFAPFSCPERGSWIQGSQDRDFSSMLLESLQPAVCLH 135
Query: 375 SFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPI 554
+P++ ++V +VLE+ GS L ++ AS+ALADAGI MYDLV S+ G + + DP
Sbjct: 136 RYPRSQIEVHLVVLENGGSVLAHAVTCASVALADAGIQMYDLVLGCSLRQDGASFVADPT 195
Query: 555 SEEEN 569
EE+
Sbjct: 196 YAEES 200
[27][TOP]
>UniRef100_Q55BB0 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
RepID=Q55BB0_DICDI
Length = 217
Score = 120 bits (301), Expect = 8e-26
Identities = 63/150 (42%), Positives = 98/150 (65%), Gaps = 5/150 (3%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRG-- 305
+ G V+ SGS+Y E NTKV+ ++ GPR ++K L+ +T +LNC + YTTFS+
Sbjct: 2 KIGVVSQGSGSSYVEMENTKVLCTIHGPRATQKTELF-ETAKLNCELKYTTFSSTTEKID 60
Query: 306 --QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADA 479
+ S K+ S ++ +++ G+I LE +PKT +D++ LVL G+ L I+ A++ALADA
Sbjct: 61 YVENSKEKDLSLLISQSIIGSIRLEKYPKTAIDIYILVLNDDGNVLVASITAATMALADA 120
Query: 480 GILMYDLVTSVSVSCLGKN-LIIDPISEEE 566
G+ M+D+V+S SVSC N +IDP + EE
Sbjct: 121 GVEMFDMVSSCSVSCTKDNRTLIDPTTLEE 150
[28][TOP]
>UniRef100_Q6P0I8 Exosome complex exonuclease MTR3 n=1 Tax=Danio rerio
RepID=EXOS6_DANRE
Length = 271
Score = 120 bits (300), Expect = 1e-25
Identities = 72/181 (39%), Positives = 103/181 (56%), Gaps = 4/181 (2%)
Frame = +3
Query: 36 SPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGP 215
SP K P+ +R RG RP F R G V+ A GSAY E GNTK+I SV+GP
Sbjct: 22 SPDKAPKAPS------SRQGVRGNGDVRPVFARCGLVSQAKGSAYIEAGNTKIICSVYGP 75
Query: 216 RESKKA-MLYSDTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFP 383
+E+++ TGRL C+ FS RG QGS+ ++ S+ L ++L + L +P
Sbjct: 76 KETERRDETDMKTGRLVCDFRLAPFSCVKRGAWIQGSEERDLSATLMESLRPGVCLHRYP 135
Query: 384 KTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEE 563
++ +DV +VLE+ GS L ++ AS+ALADAGI MYD+V ++ G ++DP E
Sbjct: 136 RSQIDVNVMVLENDGSVLAHAVTCASMALADAGIEMYDIVLGCTLRQSGNACLVDPSYAE 195
Query: 564 E 566
E
Sbjct: 196 E 196
[29][TOP]
>UniRef100_B5XC68 Exosome complex exonuclease MTR3 n=1 Tax=Salmo salar
RepID=B5XC68_SALSA
Length = 277
Score = 119 bits (298), Expect = 2e-25
Identities = 76/182 (41%), Positives = 105/182 (57%), Gaps = 6/182 (3%)
Frame = +3
Query: 42 TTGKKKPAIIKEDWTRPDGR--GFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGP 215
T KK A + R DGR G R F R G ++ A GSAY E GNTK+I V+GP
Sbjct: 24 TAAKKSTA---SNDARVDGRQRGQVDVRSVFVRCGLISQAKGSAYIEAGNTKLICCVYGP 80
Query: 216 RES-KKAMLYSDTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFP 383
RE+ +K +GRL ++ + FS RG QGSD K+ S ML ++L + L+ +P
Sbjct: 81 RETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEKDLSLMLLESLRPGVCLQKYP 140
Query: 384 KTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEE 563
++ ++V +VLE+ G+ L ++ AS+ALADAGI MYDLV S+ G +IDP E
Sbjct: 141 RSQIEVNVMVLENDGAVLAHAVTCASMALADAGIEMYDLVLGCSIRQEGATYLIDPTFLE 200
Query: 564 EN 569
EN
Sbjct: 201 EN 202
[30][TOP]
>UniRef100_A8PTK4 Putative exosome complex exonuclease RRP41, putative n=1 Tax=Brugia
malayi RepID=A8PTK4_BRUMA
Length = 249
Score = 117 bits (294), Expect = 5e-25
Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
Frame = +3
Query: 63 AIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAML 239
+II E R DGR HQ R ++ G + A GSAY E GNTKV+ +V+GP E K ++ L
Sbjct: 2 SIISEHGFRQDGRKPHQIRNLNYKLGVYSQADGSAYLEQGNTKVLCAVYGPYEPKQRSRL 61
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D + E++ +++KA E AI+ E++P++ +DVF
Sbjct: 62 LEDRCIINCQYSMATFSTNERKERPRGDRRSLEFARLMEKAFEEAILTENYPRSQIDVFC 121
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL-GKNLIIDPISEEE 566
+L++ GS L ++V +LALADAG+ M LV + S +C G +D S EE
Sbjct: 122 ELLQADGSHLAACVNVGTLALADAGVPMRGLVAAASCACAPGGLACVDVNSREE 175
[31][TOP]
>UniRef100_C1BXG8 Exosome complex exonuclease MTR3 n=1 Tax=Esox lucius
RepID=C1BXG8_ESOLU
Length = 277
Score = 117 bits (292), Expect = 8e-25
Identities = 72/167 (43%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGR--GFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGR 257
R DGR G R F R G ++ A GSAY E GNTK+I V+GPRE +K +GR
Sbjct: 36 RVDGRQRGQVDVRSVFVRCGLISQAKGSAYIEAGNTKLICCVYGPREMERKDETDMKSGR 95
Query: 258 LNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
L ++ + FS RG QGSD K+ S ML ++L + L +P++ ++V +VLE+ G
Sbjct: 96 LMTDMRFAPFSCRERGSWIQGSDEKDLSLMLLESLRPGVCLHKYPRSQIEVNVMVLENDG 155
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
S L ++ AS+ALADAGI MYDLV S+ +IDP EEN
Sbjct: 156 SVLAHAVTCASMALADAGIEMYDLVLGCSIRQESATYLIDPTYLEEN 202
[32][TOP]
>UniRef100_A3DMU9 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Staphylothermus
marinus F1 RepID=A3DMU9_STAMF
Length = 240
Score = 116 bits (290), Expect = 1e-24
Identities = 70/176 (39%), Positives = 101/176 (57%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KK 230
+KP +I+ED R DGR ++ RP G + A GSAY E+G TKVI +V+GPRE +
Sbjct: 2 EKPILIREDGLRHDGRKPNELRPIKMDVGVLKNADGSAYVEYGGTKVIAAVYGPREVYPR 61
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
+ D + C FST R + + E S ++++ALE + E +P+TT+DV
Sbjct: 62 HLALPDRALIRCRYHMAPFSTSDRKSPAPSRREIELSKVIREALESLVFSELYPRTTIDV 121
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F VL++ G ++ ASLALADAGI M DLV V+V + L++D I E E+
Sbjct: 122 FIEVLQADGGTRTTGLTAASLALADAGIPMRDLVAGVAVGKVDGVLVLD-IDEVED 176
[33][TOP]
>UniRef100_A0RXU1 Probable exosome complex exonuclease 1 n=1 Tax=Cenarchaeum
symbiosum RepID=ECX1_CENSY
Length = 243
Score = 114 bits (286), Expect = 4e-24
Identities = 62/171 (36%), Positives = 103/171 (60%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ E+ R DGR + R G +N A+GSAY EFG+ K++ +FGPR+ K M+
Sbjct: 10 LLDENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRDVHPKHMVR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
++TG L C + FS R + + + E S ++++ALE +++LE FP+T VDVF V
Sbjct: 70 TETGILRCRYHMSPFSVSERKKPAPSRREIEISKVIKEALEPSLMLEQFPRTAVDVFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G ++ AS+ALADAGI M D+V++ + + +++D +EE+
Sbjct: 130 LQADGGSRCAALAAASVALADAGIPMRDMVSACAAGKVADTIVLDVNNEED 180
[34][TOP]
>UniRef100_C3ZU99 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZU99_BRAFL
Length = 1444
Score = 114 bits (285), Expect = 5e-24
Identities = 62/150 (41%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
Frame = +3
Query: 138 GAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQ--- 308
G V+ A+GSAY E G TKVI +V+GPRE + ++ GRL C + + TF+ R Q
Sbjct: 1211 GVVSQATGSAYIEMGQTKVIAAVYGPREIARREEFTMKGRLCCELKFATFACRRRRQHIQ 1270
Query: 309 GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGIL 488
+ K+ + ++ +ALE A+ L+ FPK+ VDV+ VL+ GS L I+ A+ LADAG++
Sbjct: 1271 DNQEKDGALIVLQALEPAVCLDRFPKSQVDVYITVLQDDGSALAAAITCAAAGLADAGVM 1330
Query: 489 MYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
MYD+V SV G+ ++DP EE Q+
Sbjct: 1331 MYDIVAGCSVRQCGERQLLDPSVGEELSQE 1360
[35][TOP]
>UniRef100_O26779 Probable exosome complex exonuclease 1 n=1 Tax=Methanothermobacter
thermautotrophicus str. Delta H RepID=ECX1_METTH
Length = 240
Score = 112 bits (280), Expect = 2e-23
Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRLN 263
R DGR F + RP G + A GS+Y EFG K++V+V+GPRE++ + + D +
Sbjct: 17 REDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIR 76
Query: 264 CNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSD 434
C + FS R + G D + E S + +AL A+ILE FP++ +DVF VLE+ G
Sbjct: 77 CRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGT 136
Query: 435 LPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
I+ AS+ALADAGI M D+V + + +G +++D +SEEE+
Sbjct: 137 RCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLD-LSEEED 180
[36][TOP]
>UniRef100_B0XFY0 Exosome component 6 n=1 Tax=Culex quinquefasciatus
RepID=B0XFY0_CULQU
Length = 246
Score = 112 bits (279), Expect = 3e-23
Identities = 61/151 (40%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQ- 308
+ G V+ A GSAY E GNTKVIVSVF PRE K + + G L C++ ++ F+ R
Sbjct: 2 KLGVVSTAKGSAYLELGNTKVIVSVFDPREIPKQNTFRELGELYCDLKFSPFACVHRKNP 61
Query: 309 --GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAG 482
++ + ++ + KAL+ + FP +D+FA VLE GS L VI+ A LAL+DA
Sbjct: 62 QTDAEERSLAAAMTKALQPVVCRHLFPNFQIDIFANVLEDDGSVLGAVITAAGLALSDAT 121
Query: 483 ILMYDLVTSVSVSCLGKNLIIDP-ISEEENC 572
I M+D+VT+ +V+ G + +DP ++EE C
Sbjct: 122 ISMFDIVTATTVAVYGDRIYLDPTLAEERLC 152
[37][TOP]
>UniRef100_B3T985 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG6J21 RepID=B3T985_9ARCH
Length = 245
Score = 112 bits (279), Expect = 3e-23
Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ E+ R DGR ++ R + G + A GSAY EFG K++ VFGPR+ K M
Sbjct: 10 LLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRDVHPKHMSN 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
DTG L FS R + + E S +L++ALE A+ILE FP+T +DV+ V
Sbjct: 70 PDTGILRVRYHMAPFSVSERKNPAPSRREIEISKVLKEALEPAVILEKFPRTAIDVYLEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G + AS+ALADAGI M D+V S + + LI+D +EE+
Sbjct: 130 LQADGGTRCAALDAASVALADAGIPMRDMVCSCAAGKVADALILDVNNEED 180
[38][TOP]
>UniRef100_Q1HQF7 Exosomal 3'-5' exoribonuclease complex subunit Rrp41-like protein
n=1 Tax=Aedes aegypti RepID=Q1HQF7_AEDAE
Length = 307
Score = 111 bits (278), Expect = 4e-23
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R GR ++ R F + G V+ A GS Y E GNTKVIVSVF PRE K + G L C
Sbjct: 42 RKCGRKDNESRKYFMKLGVVSTAKGSTYLELGNTKVIVSVFDPREIPKQNKFRALGELYC 101
Query: 267 NVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDL 437
+ ++ F+ R ++ + ++ + KAL+ + FP +D+FA VLE GS L
Sbjct: 102 DFKFSPFACIHRKNPQTDAEERSLAAAMTKALQPVVCRHLFPNFQIDIFANVLEDDGSVL 161
Query: 438 PVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDP-ISEEENC 572
VI+ A LAL+DA I M+D+VT+ +V+ + + +DP ++EE C
Sbjct: 162 AAVITAAGLALSDATISMFDIVTASTVAVIEDKIYLDPTLAEERLC 207
[39][TOP]
>UniRef100_Q175D0 Putative uncharacterized protein n=1 Tax=Aedes aegypti
RepID=Q175D0_AEDAE
Length = 307
Score = 111 bits (278), Expect = 4e-23
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R GR ++ R F + G V+ A GS Y E GNTKVIVSVF PRE K + G L C
Sbjct: 42 RKCGRKDNESRKYFMKLGVVSTAKGSTYLELGNTKVIVSVFDPREIPKQNKFRALGELYC 101
Query: 267 NVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDL 437
+ ++ F+ R ++ + ++ + KAL+ + FP +D+FA VLE GS L
Sbjct: 102 DFKFSPFACIHRKNPQTDAEERSLAAAMTKALQPVVCRHLFPNFQIDIFANVLEDDGSVL 161
Query: 438 PVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDP-ISEEENC 572
VI+ A LAL+DA I M+D+VT+ +V+ + + +DP ++EE C
Sbjct: 162 AAVITAAGLALSDATISMFDIVTASTVAVIEDKIYLDPTLAEERLC 207
[40][TOP]
>UniRef100_B1L6N7 Exosome complex exonuclease 1 n=1 Tax=Candidatus Korarchaeum
cryptofilum OPF8 RepID=B1L6N7_KORCO
Length = 248
Score = 111 bits (278), Expect = 4e-23
Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 4/176 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SK 227
+K +I E+ R DGR H+ RP G + A GSA+ E+G +++ +VFGPRE
Sbjct: 7 RKPERLITEEGIRTDGRLPHEMRPIKMMVGVLEKADGSAFVEWGGNRILAAVFGPREVHP 66
Query: 228 KAMLYSDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVD 398
K M+ D + + FSTP R + G D + E S ++++AL+ AI E++P + +D
Sbjct: 67 KHMVLPDRALIRARYNMAPFSTPERRRPGPDRRSIELSKVIREALKPAIFAENYPGSVID 126
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+F VL S I+ ASLALA AG+ M LV++ SV +G +++DP +E+
Sbjct: 127 IFVEVLRSDAGTRVAGINAASLALASAGVAMRGLVSACSVGRVGSFIVVDPNHDED 182
[41][TOP]
>UniRef100_B3T8C1 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG5E24 RepID=B3T8C1_9ARCH
Length = 245
Score = 111 bits (278), Expect = 4e-23
Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ E+ R DGR ++ R + G + A GSAY EFG K++ VFGPR+ K M
Sbjct: 10 LLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRDVHPKHMSN 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
DTG L FS R + + E S +L++ALE A+ILE FP+T +DV+ V
Sbjct: 70 PDTGILRVRYHMEPFSVSERKNPAPSRREIEISKVLKEALEPAVILEKFPRTAIDVYLEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G + AS+ALADAGI M D+V S + LI+D +EE+
Sbjct: 130 LQADGGTRCAALDAASVALADAGIPMRDMVCSCAAGKAADTLILDVNNEED 180
[42][TOP]
>UniRef100_B3TAN7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8G2 RepID=B3TAN7_9ARCH
Length = 245
Score = 111 bits (277), Expect = 5e-23
Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ E+ R DGR ++ R + G + A GSAY EFG K++ VFGPR+ K M
Sbjct: 10 LLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRDVHPKHMSN 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
DTG L FS R + + E S +L++ALE A+ILE FP+T +DV+ V
Sbjct: 70 PDTGILRVRYHMEPFSVSERKNPAPSRREIEISKVLKEALEPAVILEKFPRTAIDVYLEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G + AS+ALADAGI M D+V S + LI+D +EE+
Sbjct: 130 LQADGGSRCAALDAASVALADAGIPMRDMVCSCAAGKAADALILDVNNEED 180
[43][TOP]
>UniRef100_Q4JB27 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus
acidocaldarius RepID=ECX1_SULAC
Length = 243
Score = 110 bits (276), Expect = 6e-23
Identities = 66/176 (37%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-K 230
+KP +I E+ R DGR + RP G + A GSA E GNTKVI +V+GP+E +
Sbjct: 5 QKPKLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPR 64
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
+ D L T FST R + + E S ++++ALE I+L FP+T +D+
Sbjct: 65 HLALPDKASLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILLNLFPRTVIDI 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F VL++ V + AS+ALADAGI M DL+ V+V +L++D ++E+E+
Sbjct: 125 FMEVLQADAGTRLVALMAASMALADAGIPMRDLIAGVAVGKADGSLVLD-LNEQED 179
[44][TOP]
>UniRef100_B3TBC6 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8O8 RepID=B3TBC6_9ARCH
Length = 245
Score = 110 bits (274), Expect = 1e-22
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ E+ R DGR ++ R + G + A GSAY EFG K++ VFGPR+ K +
Sbjct: 10 LLDENGIRCDGRKVNETRKVTIKAGVLKNADGSAYIEFGGNKILAGVFGPRDVHPKHLSN 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
DTG L FS R + + E S ++++ALE A+ILE FP+T +DVF V
Sbjct: 70 PDTGILRVRYHMEPFSVDERKNPAPSRREIEISKVVKEALEPAVILEKFPRTVIDVFLEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G + AS+ALADAGI M D+V + + + LIID +EE+
Sbjct: 130 LQADGGTRCAALDAASVALADAGIPMRDMVCACAAGKVADTLIIDVNNEED 180
[45][TOP]
>UniRef100_A9A5C9 Probable exosome complex exonuclease 1 n=1 Tax=Nitrosopumilus
maritimus SCM1 RepID=ECX1_NITMS
Length = 244
Score = 110 bits (274), Expect = 1e-22
Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ E+ R DGR + R + G + A GS+Y EFG+ K++V VFGPR+ K M
Sbjct: 10 LMDENGKRCDGRTVDEPRRIMIKAGGLKNADGSSYIEFGDNKILVGVFGPRDVHPKHMSD 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+DTG L FS R + + E S ++++ALE A++LE FP+T VDVF V
Sbjct: 70 TDTGILRVRYHMEPFSVGERKNPAPSRREIEISKVIKEALEPAVMLEKFPRTAVDVFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G ++ AS+ALADAGI M D+V +++ + +I+D +EE+
Sbjct: 130 LQADGGTRCAALTAASVALADAGIPMRDMVAAIAAGKVADTVILDVNNEED 180
[46][TOP]
>UniRef100_A8WQQ5 Putative exosome complex exonuclease RRP41 n=2 Tax=Caenorhabditis
briggsae RepID=EXOS4_CAEBR
Length = 240
Score = 109 bits (273), Expect = 1e-22
Identities = 69/172 (40%), Positives = 93/172 (54%), Gaps = 4/172 (2%)
Frame = +3
Query: 63 AIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLY 242
+II E R DGR Q R R G A GS Y E GNTKV+ +V+GP ESK +
Sbjct: 2 SIISEHGFRMDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYESKASKRL 61
Query: 243 SDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFAL 410
D + C S TTFS R D K E S +L+KA E I+ ESFP++ +D+F
Sbjct: 62 EDRCAIVCQYSTTTFSGLERKNRPRGDRKSTEISRLLEKAFESVILTESFPRSQIDIFCE 121
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
V++ GS+L ++ SLALADAGI M + ++ + + I+D S EE
Sbjct: 122 VIQGDGSNLAACVNATSLALADAGIPMKGIASAATCGIVETKPIVDLTSREE 173
[47][TOP]
>UniRef100_B3S9X0 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3S9X0_TRIAD
Length = 240
Score = 109 bits (272), Expect = 2e-22
Identities = 60/148 (40%), Positives = 90/148 (60%), Gaps = 3/148 (2%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRG-- 305
RTGAV+ A GSAY E NTK+I +V+GPRE K ++ + C + + TFS R
Sbjct: 17 RTGAVSQAVGSAYIELRNTKIICAVYGPREVAKKQEFNIQATVACELKFATFSCRRRRRH 76
Query: 306 -QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAG 482
Q S KEYS ++ +AL+ + L+ +PK+ +D+F VL++ GS L I+ AS+ALAD+G
Sbjct: 77 IQDSQEKEYSQIIVQALQPVVRLDKYPKSQIDIFITVLQNDGSVLGGAITAASVALADSG 136
Query: 483 ILMYDLVTSVSVSCLGKNLIIDPISEEE 566
I ++D+ + +G +IDP EE
Sbjct: 137 IEIFDVAIGCCLRQIGDLSLIDPTYLEE 164
[48][TOP]
>UniRef100_Q8U0L9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus furiosus
RepID=ECX1_PYRFU
Length = 250
Score = 109 bits (272), Expect = 2e-22
Identities = 68/172 (39%), Positives = 98/172 (56%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ RP + G + A+GSAY E+G K+I +V+GPRE K +
Sbjct: 10 LIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIHPKHLQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L + FS R + G D + E S +++ ALE A+ILE FP+T +DVF V
Sbjct: 70 PDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPALILEMFPRTAIDVFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAGI M DLV + S + +++D EE+N
Sbjct: 130 LQADAGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNKEEDN 181
[49][TOP]
>UniRef100_O59223 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus
horikoshii RepID=ECX1_PYRHO
Length = 249
Score = 108 bits (271), Expect = 2e-22
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ RP + G + A+GSAY E+G K+I +V+GPRE K +
Sbjct: 10 LIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPRELHSKHLQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L + FS R + G D + E S +++ ALE A+ILE FP+T++DVF V
Sbjct: 70 PDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTSIDVFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAGI M DLV + + + +++D EE+N
Sbjct: 130 LQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDN 181
[50][TOP]
>UniRef100_Q9V119 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus abyssi
RepID=ECX1_PYRAB
Length = 249
Score = 107 bits (267), Expect = 7e-22
Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ RP G + A+GSAY E+G K+I +V+GPRE K +
Sbjct: 10 LIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELHPKHLQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L + FS R + G D + E S +++ ALE A+ILE FP+T +DVF V
Sbjct: 70 PDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAIDVFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAGI M DLV + + + +++D EE+N
Sbjct: 130 LQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDN 181
[51][TOP]
>UniRef100_UPI0001793368 PREDICTED: similar to Exosome complex exonuclease MTR3 (mRNA
transport regulator 3 homolog) (Exosome component 6) n=1
Tax=Acyrthosiphon pisum RepID=UPI0001793368
Length = 279
Score = 107 bits (266), Expect = 9e-22
Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R DGR R +TG V A GSAY E G+TK+I SVF P+E + Y+ TG L C
Sbjct: 41 RCDGRDISAHRNLCIKTGIVTQAKGSAYLECGSTKLICSVFDPKEVPNKVEYAKTGELQC 100
Query: 267 NVSYTTFSTPVR---GQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDL 437
+ TFS R + S+ ++ + L++ALE AI F + + LVLE+ GS L
Sbjct: 101 EFKFATFSCRQRRTYTRDSEERQLCNELRRALEPAICRGEFANFEIHINVLVLENDGSVL 160
Query: 438 PVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
I+ A LAL D I MYD++ + S+ +++DP +EE
Sbjct: 161 AAAITAAGLALMDGCIPMYDVIVATSLGIYKNKILVDPTYDEE 203
[52][TOP]
>UniRef100_C1C2V7 Exosome complex exonuclease MTR3 n=1 Tax=Caligus clemensi
RepID=C1C2V7_9MAXI
Length = 274
Score = 107 bits (266), Expect = 9e-22
Identities = 68/177 (38%), Positives = 89/177 (50%), Gaps = 8/177 (4%)
Frame = +3
Query: 72 KEDWTRPDGRGFHQC--RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
K + RPDG RP F G + GSAY E G TKVI SVFGPRE +KK
Sbjct: 35 KNNKYRPDGERDKDSSVRPLFCEVGVLTQCKGSAYIERGRTKVIASVFGPREVNKKLDFS 94
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGS-----DHKEYSSMLQKALEGAIILESFPKTTVDVFA 407
S TG L+ T FS+ + S + K S L + + L +PK+ +D+F
Sbjct: 95 STTGILSVEYCETPFSSSSSNRSSKSPSNEDKNISLFLAQTFRSTVCLHLYPKSRIDIFI 154
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
VLE+ GS +P I+ +LAL+DA I ++DLV SV +IDP EE D
Sbjct: 155 TVLENDGSAIPTAITAGALALSDASINLFDLVIGASVKMSLGKALIDPCKAEEEVGD 211
[53][TOP]
>UniRef100_A8MA84 Exosome complex exonuclease 1 n=1 Tax=Caldivirga maquilingensis
IC-167 RepID=A8MA84_CALMQ
Length = 242
Score = 107 bits (266), Expect = 9e-22
Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 4/180 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-K 227
K+ P + D R DGR + RP + G + A+GSA +GNT V+ +V+GPRE
Sbjct: 3 KQSPIPLLTDGKRVDGRLPEEHRPVTMQVGVLPNANGSALVAYGNTVVLAAVYGPREPIP 62
Query: 228 KAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVD 398
+ + D + FST R + + E S ++++ALE + LE +PK+T+D
Sbjct: 63 RYITVPDKAVVRVRYHMAPFSTDDRKNPAPTRREIEISKVVKQALETVVFLEQYPKSTID 122
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
VF VL++ GS I+ ASLALADAGI M DLV VSV + +I+D E+N D
Sbjct: 123 VFLEVLQADGSTRVTSITAASLALADAGIPMRDLVVGVSVGKINDTVIVDLNKLEDNYGD 182
[54][TOP]
>UniRef100_B5IVS6 Exosome complex exonuclease 1 n=1 Tax=Thermococcus barophilus MP
RepID=B5IVS6_9EURY
Length = 247
Score = 107 bits (266), Expect = 9e-22
Identities = 67/172 (38%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ RP G + A GSAY E+G K++ +V+GPRE K +
Sbjct: 10 LIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHLQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L + FS R + G D + E S +++ ALE AIILE FP+T +DVF V
Sbjct: 70 PDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPAIILELFPRTAIDVFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAGI M DLV++ + + +++D EE+N
Sbjct: 130 LQADAGTRVAGITAASLALADAGIPMKDLVSACAAGKIEGQIVLDLNKEEDN 181
[55][TOP]
>UniRef100_Q28F19 Exosome complex exonuclease MTR3 n=1 Tax=Xenopus (Silurana)
tropicalis RepID=EXOS6_XENTR
Length = 270
Score = 107 bits (266), Expect = 9e-22
Identities = 71/166 (42%), Positives = 97/166 (58%), Gaps = 9/166 (5%)
Frame = +3
Query: 96 GRGFHQCRPAFFRTGAVNAASGSAYAEFGN--TKVIVSVFGPRESKKAMLYSDT-GRLNC 266
GRG + RP F R G ++ A GSAY E G+ TKV+ +V GPRE ++T GRL C
Sbjct: 34 GRGPSEPRPVFVRAGLLSQAKGSAYLEAGSGGTKVLCAVHGPRERGMGGERAETRGRLLC 93
Query: 267 NVSYTTFST--PVRGQ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGS 431
++ + FS P G G ++ LQ++LE A+ L+ +P+ V V+ LVLE GS
Sbjct: 94 DLRWAPFSRRGPWSGSCPAGPSPRQAGLQLQESLEPAVRLDRYPRAEVIVWVLVLEDRGS 153
Query: 432 DLPVVISVASLALADAGILMYDLVTSVSVS-CLGKNLIIDPISEEE 566
LP +S ASLALADAGI M+DL +S G L++DP +EE
Sbjct: 154 ALPAAVSCASLALADAGIEMFDLALGCGLSRGPGGELLLDPDDDEE 199
[56][TOP]
>UniRef100_B6YSI2 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
onnurineus NA1 RepID=ECX1_THEON
Length = 249
Score = 106 bits (264), Expect = 1e-21
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ RP G + A GSAY E+G K++ +V+GPRE K +
Sbjct: 10 LIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIHPKHLQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L + FS R + G D + E S +++ ALE A+ILE FP+T +D+F V
Sbjct: 70 PDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTAIDIFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAGI M DLV + + + +++D EE+N
Sbjct: 130 LQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDN 181
[57][TOP]
>UniRef100_A2BKC0 Probable exosome complex exonuclease 1 n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=ECX1_HYPBU
Length = 255
Score = 106 bits (264), Expect = 1e-21
Identities = 64/165 (38%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRLN 263
R DGR Q RP G ++ A GSA E+G T+VI +V+GPRE+ + + D +
Sbjct: 25 RHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPREAHPRHVALPDRAIIR 84
Query: 264 CNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSD 434
C FST R + + E S ++++ALE +I E +P+T +DV+ VL+S G
Sbjct: 85 CRYHMAPFSTAERKTPAPTRREVELSKVIREALEAVVISELYPRTAIDVYMEVLQSDGGT 144
Query: 435 LPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
I+ ASLALADAGI M DLV V+V + L++D E+N
Sbjct: 145 RTAAITAASLALADAGIAMRDLVAGVAVGKVDGVLVLDIDEIEDN 189
[58][TOP]
>UniRef100_A8NF62 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NF62_COPC7
Length = 230
Score = 105 bits (262), Expect = 3e-21
Identities = 60/158 (37%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTP 296
RP F + G + A+GSAY E G TK+ +++GPR+SK + + D GRLN + + FS P
Sbjct: 18 RPIFLQPGLIEQANGSAYIETGKTKIACAIYGPRQSKN-VAFHDKGRLNVELKFAPFSCP 76
Query: 297 VRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVIS--VAS 461
R + ++ + + + +A+ ++ LE+ PK+TVDVF VLE G + V AS
Sbjct: 77 KRRAPIRDAEDRSIAMAIHQAILPSVRLETLPKSTVDVFITVLEEDGIEGCVAAGSVAAS 136
Query: 462 LALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQ 575
AL DAGI ++ +V S S + +G+ + +DP SE+E+ Q
Sbjct: 137 AALVDAGIEVFGIVASTSAAVIGEEIWLDP-SEQESSQ 173
[59][TOP]
>UniRef100_B7R2K9 Exosome complex exonuclease 1 n=1 Tax=Thermococcus sp. AM4
RepID=B7R2K9_9EURY
Length = 248
Score = 105 bits (262), Expect = 3e-21
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ R G + A GSAY E+G K++ +V+GPRE K +
Sbjct: 9 LIDENGRRIDGRKKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHLQR 68
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
DT L + FS R + G D + E S +++ ALE A+ILE FP+T VDVF V
Sbjct: 69 PDTAVLRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTVVDVFIEV 128
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAG+ M DLV + + + +++D +E+N
Sbjct: 129 LQADAGTRVAGITAASLALADAGVPMRDLVAACAAGKIDGEIVLDLNKDEDN 180
[60][TOP]
>UniRef100_C5A2B9 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=ECX1_THEGJ
Length = 249
Score = 105 bits (262), Expect = 3e-21
Identities = 65/172 (37%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ R G + A GSAY E+G K++ +V+GPRE K +
Sbjct: 10 LIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHLQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
DT L + FS R + G D + E S +++ ALE A+ILE FP+T VDVF V
Sbjct: 70 PDTAVLRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTVVDVFIEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAG+ M DLV + + + +++D +E+N
Sbjct: 130 LQADAGTRVAGITAASLALADAGVPMRDLVAACAAGKIDGEIVLDLNKDEDN 181
[61][TOP]
>UniRef100_Q469M3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q469M3_METBF
Length = 501
Score = 105 bits (261), Expect = 3e-21
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-K 230
K +I +D R DGR + RP G ++ A GS Y E+G KV+V VFGPRE+ +
Sbjct: 4 KPEKLITDDGLRLDGRHADEIRPMKIEIGVLSRADGSCYLEWGRNKVLVGVFGPREAHPR 63
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
+DT + + +FST R + + E S + ++A E I+ E FPKT +D+
Sbjct: 64 RSQRADTAVIRYKYNMASFSTEDRARPGPSRRSIEISKVSREAFEPVIMAELFPKTAIDI 123
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F +L++ I+ +S+ALADAGI M LVTS + + +++D EE+N
Sbjct: 124 FVEILQADAGTRTAAINASSIALADAGIPMKGLVTSCAFGKVDGQIVLDLNKEEDN 179
[62][TOP]
>UniRef100_C6A456 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A456_THESM
Length = 246
Score = 104 bits (260), Expect = 4e-21
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ R G + +A GSAY E+G K++ +V+GPRE K +
Sbjct: 9 LIDENGYRVDGRKKYELRKIKMEVGVLKSADGSAYVEWGKNKIMAAVYGPREIHPKHLQK 68
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L + FS R + G D + E S +++ ALE A+ILE FP+T++D+F V
Sbjct: 69 PDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPAVILELFPRTSIDIFIEV 128
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAGI M DLV + + + +++D EE+N
Sbjct: 129 LQADAGTRVAGITAASLALADAGIPMKDLVAACAAGKIDGEIVLDLNKEEDN 180
[63][TOP]
>UniRef100_Q97BZ5 Probable exosome complex exonuclease 1 n=1 Tax=Thermoplasma
volcanium RepID=ECX1_THEVO
Length = 248
Score = 104 bits (260), Expect = 4e-21
Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 4/179 (2%)
Frame = +3
Query: 45 TGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES 224
T K +I ED R DGR F++ RP G +N A GSAY E+G K+IV V+GP+E+
Sbjct: 4 TETSKIKLINEDNLRLDGRSFNELRPIKIEAGVLNRADGSAYIEWGGNKIIVGVYGPKEA 63
Query: 225 -KKAMLYSDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTT 392
K D + + FS R + G D + E S ++ +AL +I++E FP+
Sbjct: 64 YPKHSQDIDHAVVKARYNMAAFSVDERKRPGPDRRTMEISKVISEALSSSIMIEQFPRAE 123
Query: 393 VDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+DV+ VL++ ++ A++ALADAGI M D+V + + ++++D EE+N
Sbjct: 124 IDVYIEVLQADAGTRIAGLTAATVALADAGIPMRDMVVGCTAGKVDGHIVLDLSKEEDN 182
[64][TOP]
>UniRef100_Q1HPJ2 MRNA transport regulator 3 n=1 Tax=Bombyx mori RepID=Q1HPJ2_BOMMO
Length = 268
Score = 104 bits (259), Expect = 6e-21
Identities = 60/150 (40%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQ- 308
RT V+ A GSAY E TKV+ SVF PRE + G+L C V + FS P + +
Sbjct: 20 RTDMVSQAKGSAYVELRKTKVVCSVFDPREIPHQNEFRQLGQLYCEVKFAPFSCPRKRRP 79
Query: 309 ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADA 479
+ K S L++ALE A+ FP +DV +LE GS L I+ A LALA+A
Sbjct: 80 YVPDVEEKALSVALRQALEPAVCRHFFPDYQIDVLIYILEHDGSCLAAAINAAGLALANA 139
Query: 480 GILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+ M+D++TS SV+ +G + IDP EE+
Sbjct: 140 AVPMFDIITSCSVAVIGHQMFIDPPEIEEH 169
[65][TOP]
>UniRef100_C1BMH5 Exosome complex exonuclease MTR3 n=1 Tax=Caligus rogercresseyi
RepID=C1BMH5_9MAXI
Length = 278
Score = 104 bits (259), Expect = 6e-21
Identities = 60/155 (38%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT-GRLNCNVSYTTFST 293
RP F G + + GSAY E G TKV+ SVFGPRE K + +S T G LN F++
Sbjct: 49 RPLFCEVGILTQSKGSAYLERGRTKVLASVFGPREVSKKLDFSSTAGSLNVEYKEAPFAS 108
Query: 294 PVRGQG-SDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
G+G + ++ L + L + L +PK+ +DV VLE GS +P I+ A+LAL
Sbjct: 109 RSDGRGEAKERDVGLFLAQTLRSTVCLHLYPKSRIDVCITVLEDDGSAIPTAITAAALAL 168
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQ 575
+DA I ++DLV SV G + P EE Q
Sbjct: 169 SDASINLFDLVIGASVKLCGGKALSYPCKAEEGIQ 203
[66][TOP]
>UniRef100_B3MN36 GF15621 n=1 Tax=Drosophila ananassae RepID=B3MN36_DROAN
Length = 249
Score = 104 bits (259), Expect = 6e-21
Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K S
Sbjct: 7 LLSEQGLRLDGRRPHELRHIQCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGKKTES 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQ--GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ +NC S TFST R D K E+ LQ+AL AI E +P++ +DV+ V
Sbjct: 67 NDVIINCQYSQATFSTAERKNRPRGDRKSQEFKMYLQQALSAAIKSELYPRSQIDVYVEV 126
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G++ V ++ A+LAL DAGI + +L+ + + S N+ + IS E
Sbjct: 127 LQADGANYAVALNAATLALIDAGICLNELIVACTASLSKNNIPLTDISHIE 177
[67][TOP]
>UniRef100_Q975G8 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus tokodaii
RepID=ECX1_SULTO
Length = 247
Score = 104 bits (259), Expect = 6e-21
Identities = 66/176 (37%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-K 230
+KP +I ++ R DGR + RP G + A GSA E GNTKVI +V+GP+E +
Sbjct: 9 QKPRLILDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPR 68
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
+ D L T FST R + + E S ++++ALE I++E FP+T +DV
Sbjct: 69 HLALPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILVELFPRTVIDV 128
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F VL++ V + AS+ALADAGI M DL+ V+V L++D ++E E+
Sbjct: 129 FMEVLQADAGTRLVSLMAASMALADAGIPMRDLIAGVAVGKADGVLVLD-LNEPED 183
[68][TOP]
>UniRef100_Q5JIR6 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
kodakarensis RepID=ECX1_PYRKO
Length = 249
Score = 104 bits (259), Expect = 6e-21
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I E+ R DGR ++ RP G + A GSAY E+G KV+ +V+GPRE K +
Sbjct: 10 LIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIHPKHLQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L + FS R + G D + E S +++ ALE A++L FP+T +DVF +
Sbjct: 70 PDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALLLHMFPRTAIDVFIEI 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ ASLALADAGI M DLV + + + +++D EE+N
Sbjct: 130 LQADAGTRVAGITAASLALADAGIPMKDLVAACAAGKIDGEIVLDLNKEEDN 181
[69][TOP]
>UniRef100_Q17533 Putative exosome complex exonuclease RRP41 n=1 Tax=Caenorhabditis
elegans RepID=EXOS4_CAEEL
Length = 240
Score = 103 bits (258), Expect = 7e-21
Identities = 66/171 (38%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
II E R DGR Q R R G A GS Y E GNTKV+ +V+GP E K +
Sbjct: 3 IISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYEGKSSKRIE 62
Query: 246 DTGRLNCNVSYTTFSTPVRGQGS--DHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D + C S T FS R + D K E S +L+KA E I+ E+FP++ +D+F V
Sbjct: 63 DKCAIVCQYSATKFSGLERKNRTRGDRKSTEISRLLEKAFESVILTEAFPRSQLDIFCEV 122
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
++ GS+L ++ SLALADAGI M + ++ + + I+D S EE
Sbjct: 123 IQGDGSNLAACVNATSLALADAGIPMKGIASAATCGVVDGKPIVDLTSREE 173
[70][TOP]
>UniRef100_A5UJR9 Ribonuclease PH, Rph n=1 Tax=Methanobrevibacter smithii ATCC 35061
RepID=A5UJR9_METS3
Length = 234
Score = 103 bits (257), Expect = 1e-20
Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRLN 263
R DGR +++ RP G + A GSAY E G K++V+V+GPRES + +L +TG +
Sbjct: 7 REDGRKYNELRPIKIEAGVLERADGSAYLEVGGNKILVAVYGPRESYIRRLLEPNTGVIR 66
Query: 264 CNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSD 434
C + FS R + G D + E S + AL A++LE++P++ VD++ V+E+ G
Sbjct: 67 CRYNMAPFSVDDRKRPGPDRRSSEISKITADALRPALMLENYPRSMVDIYIEVIEAEGGT 126
Query: 435 LPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
I+ AS+AL DAGI M D+V + + +I+D +SE E+
Sbjct: 127 RCAGITAASVALVDAGIPMKDIVVGCAAGKVNDEIILD-LSEVED 170
[71][TOP]
>UniRef100_A3MUP1 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=ECX1_PYRCJ
Length = 246
Score = 103 bits (257), Expect = 1e-20
Identities = 64/178 (35%), Positives = 94/178 (52%), Gaps = 5/178 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
KK P + ++ R DGR Q R + G V+ A GSA +G T + +V+GPRE
Sbjct: 2 KKPPVPLLQNGLRADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREMHP 61
Query: 231 AML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTV 395
L D G + FST + E S +L++ALE A++LE +P++ +
Sbjct: 62 RHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQYPRSRI 121
Query: 396 DVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
DVF +L++ GS ++ ASLALADAGI M DLV VSV + +++D E+N
Sbjct: 122 DVFIEILQADGSTRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLDLNGLEDN 179
[72][TOP]
>UniRef100_B9ACR7 Putative uncharacterized protein n=2 Tax=Methanobrevibacter smithii
RepID=B9ACR7_METSM
Length = 233
Score = 103 bits (256), Expect = 1e-20
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRLN 263
R DGR +++ RP G + A GSAY E G K++V+V+GPRES + +L +TG +
Sbjct: 6 REDGRKYNELRPIKIEAGVLERADGSAYLEVGGNKILVAVYGPRESYIRRLLEPNTGVIR 65
Query: 264 CNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSD 434
C + FS R + G D + E S + AL A++LE++P++ VD++ V+E+ G
Sbjct: 66 CRYNMAPFSVDDRKRPGPDRRSSEISKITADALRPALMLENYPRSMVDIYIEVIEAEGGT 125
Query: 435 LPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
I+ AS+AL DAGI M D+V + + +++D +SE E+
Sbjct: 126 RCAGITAASVALVDAGIPMKDIVVGCAAGKVNDKIVLD-LSEVED 169
[73][TOP]
>UniRef100_C3N5R3 Exosome complex exonuclease 1 n=1 Tax=Sulfolobus islandicus M.16.27
RepID=C3N5R3_SULIA
Length = 245
Score = 102 bits (255), Expect = 2e-20
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA 233
++P +I ED R DGR + R G + A GSA E GNTK I +V+GP+E
Sbjct: 5 ERPKLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPR 64
Query: 234 ML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
L D L T FST R + + E S ++++ALE A+++E FP+T +DV
Sbjct: 65 HLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDV 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F +L++ V + ASLALADAGI M DL+ V+V +++D ++E E+
Sbjct: 125 FTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIVLD-LNEAED 179
[74][TOP]
>UniRef100_C3MVG4 Exosome complex exonuclease 1 n=2 Tax=Sulfolobus islandicus
RepID=C3MVG4_SULIM
Length = 245
Score = 102 bits (255), Expect = 2e-20
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA 233
++P +I ED R DGR + R G + A GSA E GNTK I +V+GP+E
Sbjct: 5 ERPKLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPR 64
Query: 234 ML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
L D L T FST R + + E S ++++ALE A+++E FP+T +DV
Sbjct: 65 HLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDV 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F +L++ V + ASLALADAGI M DL+ V+V +++D ++E E+
Sbjct: 125 FTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIVLD-LNEPED 179
[75][TOP]
>UniRef100_C3MQ46 Exosome complex exonuclease 1 n=3 Tax=Sulfolobus islandicus
RepID=C3MQ46_SULIL
Length = 245
Score = 102 bits (255), Expect = 2e-20
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA 233
++P +I ED R DGR + R G + A GSA E GNTK I +V+GP+E
Sbjct: 5 ERPKLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPR 64
Query: 234 ML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
L D L T FST R + + E S ++++ALE A+++E FP+T +DV
Sbjct: 65 HLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDV 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F +L++ V + ASLALADAGI M DL+ V+V +++D ++E E+
Sbjct: 125 FTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIVLD-LNEPED 179
[76][TOP]
>UniRef100_A8A8Z2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Ignicoccus
hospitalis KIN4/I RepID=A8A8Z2_IGNH4
Length = 241
Score = 102 bits (255), Expect = 2e-20
Identities = 61/170 (35%), Positives = 90/170 (52%), Gaps = 4/170 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK- 227
K+ P + D R DGRG RP + G + A GSA+ G T+V+ +V+GPRE
Sbjct: 3 KEPPVPLIVDGKRHDGRGPADLRPLEMKVGVLYNADGSAWLRIGGTEVVAAVYGPREPPM 62
Query: 228 KAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVD 398
+ M+ D + C FST R + + E S ++++ALE I+ FP+T +D
Sbjct: 63 RGMVLPDRAVIRCRYHMAPFSTDERKNPAPSRREIELSKVIREALEATILTHLFPRTIID 122
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
VF V+ + G ++ ASLALADAGI M LV V+V + L++D
Sbjct: 123 VFIEVIRADGGTRTAALTAASLALADAGIPMKGLVAGVAVGKVQGTLVLD 172
[77][TOP]
>UniRef100_A1RXQ6 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Thermofilum
pendens Hrk 5 RepID=A1RXQ6_THEPD
Length = 245
Score = 102 bits (255), Expect = 2e-20
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLY 242
+I E+ R DGR + RP G + A GSAY E GN KV+ +V+GPRE +
Sbjct: 9 LIDENGRRVDGRLPDEMRPLRVEAGVLKNADGSAYVELGNNKVLAAVYGPREPMPRHEAL 68
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L C S FS R + E S ++++AL A+ L +P+T+++V+ +
Sbjct: 69 PDRAILKCRYSMLPFSVAERKSPQPSRREIELSKVIREALAPAVFLNEYPRTSIEVYIHI 128
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
LE+ G I S+ALADAGI M DLV +++V +G L++D
Sbjct: 129 LEADGGTRTASIIAGSVALADAGIAMRDLVAAIAVGKIGNVLVLD 173
[78][TOP]
>UniRef100_Q9HIP2 Probable exosome complex exonuclease 1 n=1 Tax=Thermoplasma
acidophilum RepID=ECX1_THEAC
Length = 248
Score = 102 bits (255), Expect = 2e-20
Identities = 59/175 (33%), Positives = 98/175 (56%), Gaps = 4/175 (2%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKA 233
K +I ED R DGR F++ RP + G +N A GSAY E+G K++V V+GP+E+ K
Sbjct: 8 KIKLINEDNLRLDGRSFNELRPIKIQAGVLNRADGSAYIEWGGNKIMVGVYGPKEAYPKH 67
Query: 234 MLYSDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVF 404
D + + FS R + G D + E S ++ +AL +I++E FP+ +DV+
Sbjct: 68 SQDIDHAIVKARYNMAAFSVDERKRPGPDRRTMEISKVISEALSSSIMIEQFPRAEIDVY 127
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
VL++ ++ A++ALADAG+ M D+V + + ++++D EE+N
Sbjct: 128 IEVLQADAGTRIAGLTAATVALADAGVPMRDMVVGCTAGKVDGHMVLDLSKEEDN 182
[79][TOP]
>UniRef100_Q9UXC2 Probable exosome complex exonuclease 1 n=2 Tax=Sulfolobus
solfataricus RepID=ECX1_SULSO
Length = 248
Score = 102 bits (255), Expect = 2e-20
Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA 233
++P +I +D R DGR + R G + A GSA E GNTK I +V+GP+E
Sbjct: 8 ERPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPR 67
Query: 234 ML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
L D L T FST R + + E S ++++ALE A+++E FP+T +DV
Sbjct: 68 HLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDV 127
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F +L++ V + ASLALADAGI M DL+ V+V +I+D ++E E+
Sbjct: 128 FTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIILD-LNETED 182
[80][TOP]
>UniRef100_A0B8W3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosaeta
thermophila PT RepID=A0B8W3_METTP
Length = 245
Score = 102 bits (253), Expect = 3e-20
Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Frame = +3
Query: 75 EDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTG 254
+D R DGR F + RP G + A GS Y E G+ KVI +V+GPRE L +
Sbjct: 8 KDGIRLDGRRFDELRPIKMEVGVLKRADGSCYMEMGDNKVIAAVYGPREVHPRHL-QEVN 66
Query: 255 RLNCNVSYTTFSTPV---RGQGSDHKEY--SSMLQKALEGAIILESFPKTTVDVFALVLE 419
R Y S V R G D + Y S + ++ALE I+ FPK+ +D+F VL+
Sbjct: 67 RAIIRYRYNMASFSVEERRRPGPDRRSYELSKVSREALEPVILTSYFPKSVIDIFVEVLQ 126
Query: 420 SSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+ I+ AS+ALADAGI M LV+S + + +++DP+ +E+N
Sbjct: 127 ADAGTRTAGINAASVALADAGIPMRSLVSSCAAGKVDGQIVLDPMKDEDN 176
[81][TOP]
>UniRef100_Q647V6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos9D1
RepID=Q647V6_9ARCH
Length = 245
Score = 102 bits (253), Expect = 3e-20
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
K++ +IK D R DGRGF + RP G + A GS Y E GN KVI +V+GPRE
Sbjct: 2 KEEIELIK-DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVYGPREMHP 60
Query: 231 AMLY-SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVD 398
+ + + FST R + G D + E S + ++A + I+ E +PK +D
Sbjct: 61 RHAQDAKMAVVKFRYNMAPFSTDDRKRPGPDRRSVEISKVCREAFDPVIMRELYPKMGID 120
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
V+ +L+S I+ AS+ALADAGI M DLV+S++V +G +++D + E+N
Sbjct: 121 VYVELLQSDAGTRTAGINAASIALADAGIPMKDLVSSIAVGKIGGEMVLDLNAAEDN 177
[82][TOP]
>UniRef100_O29757 Probable exosome complex exonuclease 1 n=1 Tax=Archaeoglobus
fulgidus RepID=ECX1_ARCFU
Length = 258
Score = 102 bits (253), Expect = 3e-20
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA 233
+KP + D R DGR F + RP + A GS Y E G KVI +VFGPRE
Sbjct: 6 EKPEKLIVDGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPR 65
Query: 234 MLYSDTGRL-NCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDV 401
L + + + FS R + G D + E S + ++A E I+ E FP++ +D+
Sbjct: 66 HLQDPSKAIIRYRYNMAPFSVEERKRPGPDRRSIEISKVSKEAFEAVIMKELFPRSAIDI 125
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F VL++ ++ AS+AL DAG+ M ++TSV+V L++DP+ EE+N
Sbjct: 126 FVEVLQADAGSRTACLNAASVALVDAGVPMKGMITSVAVGKADGQLVLDPMKEEDN 181
[83][TOP]
>UniRef100_UPI0001923A5C PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Hydra magnipapillata RepID=UPI0001923A5C
Length = 244
Score = 101 bits (252), Expect = 4e-20
Identities = 63/173 (36%), Positives = 95/173 (54%), Gaps = 5/173 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ + R DGR H+ R + G + A GSAY E GNTKVI SV+GP E S ++
Sbjct: 6 LVSPEGLRFDGRKCHELRKITAKKGIFSQADGSAYIEQGNTKVIASVYGPHEVSNRSKTL 65
Query: 243 SDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFAL 410
D+ +NC S TFS R D K E S +L+K AI+ E +P++ +D++
Sbjct: 66 HDSTLINCQFSMATFSMSERKNRPKGDRKSTEISMLLEKTFATAIMTELYPRSQIDIYVQ 125
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
V++S G + I+VA+LAL DAG+ M D V + + S + + + D EE+
Sbjct: 126 VIQSDGGVIAACINVATLALIDAGVPMKDFVCACTSSYVQEKNLTDINHLEES 178
[84][TOP]
>UniRef100_B0CSI5 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0CSI5_LACBS
Length = 255
Score = 101 bits (252), Expect = 4e-20
Identities = 54/154 (35%), Positives = 94/154 (61%), Gaps = 5/154 (3%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTP 296
RP F + G +N A+GSAY E NTK+ +VFGPR++K + +++ GRLN +V + FS
Sbjct: 44 RPIFLQPGLINQATGSAYIETQNTKIACAVFGPRQAKN-VAFNEKGRLNVDVKFAPFSCD 102
Query: 297 VRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSD--LPVVISVAS 461
R + ++ + + + +A+ ++ L+ PK+ +D+F ++ES G + + + VAS
Sbjct: 103 RRRAPMRDAEDRSIAMAIHQAISSSVRLDVLPKSVIDIFITIVESDGIEGCVAAGVIVAS 162
Query: 462 LALADAGILMYDLVTSVSVSCLGKNLIIDPISEE 563
AL DAGI ++ LV S S + +G+++ +DP E
Sbjct: 163 TALTDAGIEIFGLVASCSAAAVGEDIWLDPSLRE 196
[85][TOP]
>UniRef100_B8D6B9 Probable exosome complex exonuclease 1 n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D6B9_DESK1
Length = 242
Score = 101 bits (252), Expect = 4e-20
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 4/175 (2%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKA 233
KP +I+ D R DGR + RP G + A+GSA E+GNTK + +V+GPRE+ K
Sbjct: 4 KPVLIR-DGLRIDGRKPEELRPVRIALGVLKNANGSALVEYGNTKALAAVYGPREALPKH 62
Query: 234 MLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVF 404
+ D L FST R + + E S ++++ALE + FP+ ++DVF
Sbjct: 63 ISLPDRAILRVRYHMAPFSTTERKSPAPSRREIELSKVIREALESVVFTSQFPRASIDVF 122
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L++ G ++ ASLALADAGI M DLV V+V + L++D I+E E+
Sbjct: 123 IEILQADGGTRTTGLTAASLALADAGIPMRDLVIGVAVGKVDGVLVLD-INELED 176
[86][TOP]
>UniRef100_C7DI01 3' exoribonuclease n=1 Tax=Candidatus Micrarchaeum acidiphilum
ARMAN-2 RepID=C7DI01_9EURY
Length = 246
Score = 101 bits (251), Expect = 5e-20
Identities = 62/184 (33%), Positives = 105/184 (57%), Gaps = 6/184 (3%)
Frame = +3
Query: 45 TGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES 224
+ KP +I D R DGR F++ RP G + A+GSAY E+GN KV+ +V+GP+E+
Sbjct: 3 SSSNKPQLIV-DGKRLDGRDFNELRPLKIEAGILANANGSAYLEWGNNKVLAAVYGPKEA 61
Query: 225 KKAMLYSDTGR--LNCNVSYTTFSTPV-RGQGSDHK---EYSSMLQKALEGAIILESFPK 386
L +DT + + C S FS+ G+ ++ E S + ++ E ++LE FP
Sbjct: 62 TPRHL-ADTNKAIIKCRYSMAPFSSMGDHGRSGPNRRAIEISKVTKEVFENVVMLEEFPG 120
Query: 387 TTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ +++F +L+S G I+ A++ALA+AGI + D+V +VS + ++++ID E+
Sbjct: 121 SEIEIFIEILQSDGGTRAAGITAAAVALANAGIHVKDMVYAVSAGRIDEHVVIDVNMIED 180
Query: 567 NCQD 578
N D
Sbjct: 181 NYSD 184
[87][TOP]
>UniRef100_Q8ZVM9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
aerophilum RepID=ECX1_PYRAE
Length = 246
Score = 101 bits (251), Expect = 5e-20
Identities = 62/171 (36%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
K+ P + ++ R DGR Q R G V+ A GSA +G T + +V+GPRE
Sbjct: 2 KRPPVPLLQNGVRADGRTPDQMREVKIAVGVVSNADGSAMVSYGATTAVAAVYGPREMHP 61
Query: 231 AML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTV 395
L D G + FST + E S +L++ALE AI+LE +P++ +
Sbjct: 62 RHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKILREALEPAIVLEQYPRSRI 121
Query: 396 DVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
DVF +L++ GS ++ ASLALADAGI M DLV VSV + +++D
Sbjct: 122 DVFVEILQADGSTRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLD 172
[88][TOP]
>UniRef100_B4MX14 GK15569 n=1 Tax=Drosophila willistoni RepID=B4MX14_DROWI
Length = 251
Score = 100 bits (250), Expect = 6e-20
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K S
Sbjct: 7 LLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGKNKSS 66
Query: 246 DTGR--LNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
++ +NC S TFST R D K E+ LQ+AL AI E +P++ +DV+
Sbjct: 67 ESNDVIINCQYSQATFSTAERKNRPRGDRKSQEFKMYLQQALSAAIKSELYPRSQIDVYV 126
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G++ V ++ A+LAL DAGI + + + + + S N+ + IS+ E
Sbjct: 127 EVLQADGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQVE 179
[89][TOP]
>UniRef100_Q5XQ92 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos26D8
RepID=Q5XQ92_9ARCH
Length = 247
Score = 100 bits (250), Expect = 6e-20
Identities = 64/177 (36%), Positives = 99/177 (55%), Gaps = 4/177 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
K++ +IK D R DGRGF + RP G + A GS Y E G+ KVI +V+GPRE
Sbjct: 2 KEEIELIK-DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGDNKVIAAVYGPREMHP 60
Query: 231 AMLY-SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVD 398
+ + + FST R + G D + E S + ++A + I+ E +PKT ++
Sbjct: 61 RHAQDAKMAVVKFRYNMAPFSTDDRKRPGPDRRSVEISKVCREAFDPVIMRELYPKTGIE 120
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
V+ +L+S I+ AS+ALADAGI M DLV+S++V +G +++D + E+N
Sbjct: 121 VYVELLQSDAGTRTAGINAASIALADAGIPMKDLVSSIAVGKIGGEMVLDLNAAEDN 177
[90][TOP]
>UniRef100_Q8PTT8 Probable exosome complex exonuclease 1 n=1 Tax=Methanosarcina mazei
RepID=ECX1_METMA
Length = 493
Score = 100 bits (250), Expect = 6e-20
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLY 242
+I +D R DGR + RP G ++ A GS Y E+G K++V VFGPRE+ +
Sbjct: 10 LITDDGLRLDGRRADEIRPMKIEVGVLSRADGSCYLEWGRNKILVGVFGPREAHPRRSQR 69
Query: 243 SDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+D+ + + +FS R + + E S + ++A E I+ E FPKT +D+F V
Sbjct: 70 ADSAVIRYRYNMASFSVEDRARPGPSRRSIEISKVSREAFEPVIMAELFPKTAIDIFVEV 129
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+ +S+ALADAGI M L+TS + + +++D EE+N
Sbjct: 130 LQADAGTRTAAINASSIALADAGIPMKGLITSCAFGKVDGKIVLDLNKEEDN 181
[91][TOP]
>UniRef100_B4KHM2 GI10716 n=1 Tax=Drosophila mojavensis RepID=B4KHM2_DROMO
Length = 249
Score = 100 bits (249), Expect = 8e-20
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K
Sbjct: 7 LLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGKKTEG 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQ--GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ +NC S TFST R D K E+ LQ+AL AI E +P++ +D++ V
Sbjct: 67 NDLVINCQYSQATFSTSERKNRPRGDRKSQEFKMYLQQALSAAIKSELYPRSQIDIYVEV 126
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G++ V ++ A+LAL DAGI + + V + + S N+ + IS E
Sbjct: 127 LQADGANYAVSLNAATLALIDAGICLNEFVVACTASLSNANIPLTDISHIE 177
[92][TOP]
>UniRef100_Q649Q0 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos34H10
RepID=Q649Q0_9ARCH
Length = 242
Score = 100 bits (249), Expect = 8e-20
Identities = 62/169 (36%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Frame = +3
Query: 75 EDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDT 251
+D R GRGF + RP G + A GS Y E GN KVI V+GPRE + +
Sbjct: 10 KDGKRLSGRGFEELRPIKIEVGVLKRADGSCYFELGNNKVIAGVYGPREMHPRHFQNAKM 69
Query: 252 GRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLES 422
+ + FS R + G D + E S + +KAL+ I+ E +PKT ++V+ VL+S
Sbjct: 70 AVVKYRYNMAPFSVDDRKRPGPDRRSQEISMVSRKALDPVILRELYPKTAIEVYVEVLQS 129
Query: 423 SGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
I+ AS+ALADAGI M DLV+SV++ + +++D ++E+N
Sbjct: 130 DAGTRTAGINAASVALADAGIPMRDLVSSVAIGKIDGEVVLDLDAKEDN 178
[93][TOP]
>UniRef100_B5IEJ8 Exosome complex exonuclease 1 n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IEJ8_9EURY
Length = 243
Score = 100 bits (249), Expect = 8e-20
Identities = 61/172 (35%), Positives = 96/172 (55%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLY 242
+I ++ R DGR +Q RP G + A GSA+ E+G K+I +V+GP E+ K +
Sbjct: 7 LIDDNGLRIDGRLPNQLRPIKMEVGVLKRADGSAFIEWGGNKIIAAVYGPHEAYPKHVQE 66
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+D + S FS R + G D + E S ++ +ALE I +E +P+T++DV+ V
Sbjct: 67 ADRAIVRARYSMAPFSVDERKRPGPDRRAIELSKVISEALESVIFVEKYPRTSIDVYIEV 126
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ I+VASLALADAGI M DL+ + + +++D EE+N
Sbjct: 127 LQADAGTRVAGITVASLALADAGIPMRDLIVGCAAGKIDDVVVLDLNKEEDN 178
[94][TOP]
>UniRef100_B4M9A1 GJ18275 n=1 Tax=Drosophila virilis RepID=B4M9A1_DROVI
Length = 249
Score = 100 bits (248), Expect = 1e-19
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K
Sbjct: 7 LLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGKKTEG 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQ--GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ +NC S TFST R D K E+ LQ+AL AI E +P++ +D++ V
Sbjct: 67 NDLIINCQYSQATFSTSERKNRPRGDRKSQEFKMYLQQALSAAIKSELYPRSQIDIYVEV 126
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G++ V ++ A+LAL DAGI + + V + + S N+ + IS E
Sbjct: 127 LQADGANYAVSLNAATLALIDAGICLNEFVVACTASLSKSNIPLTDISHIE 177
[95][TOP]
>UniRef100_B4JCT4 GH10637 n=1 Tax=Drosophila grimshawi RepID=B4JCT4_DROGR
Length = 249
Score = 100 bits (248), Expect = 1e-19
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K
Sbjct: 7 LLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKAKKSEG 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQ--GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ +NC S TFST R D K E+ LQ+AL AI E +P++ +D++ V
Sbjct: 67 NDLIINCQYSQATFSTAERKNRPRGDRKSQEFKMYLQQALSAAIKSELYPRSQIDIYVEV 126
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G++ V ++ A+LAL DAGI + + V + + S N+ + IS E
Sbjct: 127 LQADGANYAVSLNAATLALIDAGICLNEFVVACTASLSKSNIPLTDISHIE 177
[96][TOP]
>UniRef100_B1Y978 Probable exosome complex exonuclease 1 n=1 Tax=Thermoproteus
neutrophilus V24Sta RepID=ECX1_THENV
Length = 246
Score = 100 bits (248), Expect = 1e-19
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
KK P + + R DGR Q R G ++ A GSA +G T + +V+GPRE
Sbjct: 2 KKPPVPLLQGGVRADGRAPDQMREVQISVGVISNADGSAMVSYGATTAVAAVYGPREMHP 61
Query: 231 AML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTV 395
L D G + FST + E S +L++ALE A++LE +P++ +
Sbjct: 62 RHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQYPRSRI 121
Query: 396 DVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
DVF +L++ GS ++ ASLALADAGI M DLV VSV + +++D
Sbjct: 122 DVFIEILQADGSTRVASLTAASLALADAGIYMRDLVIGVSVGLVDGTVVLD 172
[97][TOP]
>UniRef100_A4WM67 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
arsenaticum DSM 13514 RepID=ECX1_PYRAR
Length = 246
Score = 100 bits (248), Expect = 1e-19
Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 5/178 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
KK P + ++ R DGR Q R G V+ A GSA +G T + +V+GPRE
Sbjct: 2 KKPPVPLLQNGVRADGRLPDQMREVKISVGVVSNADGSAMVSYGATTAVAAVYGPREMHP 61
Query: 231 AML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTV 395
L D G + FST + E S +L++ALE A++LE +P++ +
Sbjct: 62 RHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVLLEQYPRSRI 121
Query: 396 DVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
DVF ++++ GS ++ ASLALADAGI M DLV VSV + +++D E+N
Sbjct: 122 DVFIEIIQADGSTRVASLTAASLALADAGIYMRDLVVGVSVGLVDGVVVLDLNGLEDN 179
[98][TOP]
>UniRef100_A1RST0 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
islandicum DSM 4184 RepID=ECX1_PYRIL
Length = 246
Score = 99.8 bits (247), Expect = 1e-19
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
KK P + ++ R DGR Q R G V+ A GSA +G T + +V+GPRE
Sbjct: 2 KKPPVPLFQNGVRADGRAPDQMREVNITVGIVSNADGSAMVSYGATTAVAAVYGPREMHP 61
Query: 231 AML-YSDTGRLNCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTV 395
L D G + FST + E S +L++ALE A++LE +P++ +
Sbjct: 62 RHLSLPDRGVMRVRYHMAPFSTKDERKSPTPTRREIEISKILREALEPAVVLEQYPRSRI 121
Query: 396 DVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
DVF +L++ GS ++ ASLALADAG+ M DLV VSV + +++D
Sbjct: 122 DVFIEILQADGSTRVASLTAASLALADAGVYMRDLVIGVSVGLVDGAVVLD 172
[99][TOP]
>UniRef100_Q64DM6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos18B6
RepID=Q64DM6_9ARCH
Length = 242
Score = 99.4 bits (246), Expect = 2e-19
Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 4/177 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK- 227
++K +IK D R GRGF + RP G + A GS Y E GN K I +V+GPRE
Sbjct: 3 EEKMELIK-DGKRLSGRGFEELRPIKIDVGVLKRADGSCYFELGNNKAIAAVYGPREMHP 61
Query: 228 KAMLYSDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVD 398
+ + + + FS R + G D + E S + +KAL+ I+ E +PKT ++
Sbjct: 62 RHFQNAKMAVVKYRYNMAPFSVDDRKRPGPDRRSQEISMVSRKALDPVILRELYPKTAIE 121
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
V+ VL+S I+ AS+ALADAGI M DLV+SV++ + +++D ++E+N
Sbjct: 122 VYVEVLQSDAGTRTAGINAASVALADAGIPMKDLVSSVAIGKIDGEVVLDLDAKEDN 178
[100][TOP]
>UniRef100_B4P324 GE11809 n=1 Tax=Drosophila yakuba RepID=B4P324_DROYA
Length = 246
Score = 99.0 bits (245), Expect = 2e-19
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 236
K ++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K
Sbjct: 4 KYELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGKQ 63
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVF 404
S +NC S TFST R D K E+ LQ+AL AI E +P++ +D++
Sbjct: 64 TESI---INCQYSQATFSTAERKNRPRGDRKSLEFKMYLQQALSAAIKSELYPRSQIDIY 120
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G++ V ++ A+LAL DAGI + + + + + S N+ + IS E
Sbjct: 121 VEVLQADGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISHFE 174
[101][TOP]
>UniRef100_Q64B50 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos27G5
RepID=Q64B50_9ARCH
Length = 247
Score = 99.0 bits (245), Expect = 2e-19
Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
K++ +IKE R DGRGF + RP G + A GS Y E GN KVI +V+GPRE
Sbjct: 2 KEEIELIKEG-KRSDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVYGPREMHP 60
Query: 231 AMLY-SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVD 398
+ + + FST R + G D + E S + ++A + I+ E +PK ++
Sbjct: 61 RHAQDAKMAVIKFRYNMAPFSTDDRKRPGPDRRSVEISKVCREAFDPVIMRELYPKMGIE 120
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
V+ +L+S I+ AS+ALADAGI M DLV+S++V + +++D + E+N
Sbjct: 121 VYVELLQSDAGTRTAGINAASIALADAGIPMKDLVSSIAVGKINGEVVLDLNAAEDN 177
[102][TOP]
>UniRef100_Q9YC03 Probable exosome complex exonuclease 1 n=1 Tax=Aeropyrum pernix
RepID=ECX1_AERPE
Length = 246
Score = 99.0 bits (245), Expect = 2e-19
Identities = 60/161 (37%), Positives = 88/161 (54%), Gaps = 4/161 (2%)
Frame = +3
Query: 78 DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLYSDTG 254
D R DGR RP + G ++ A GSA EFG T+V+ +V+GPRE ++ + D
Sbjct: 14 DGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPREPHQRFYVLPDRA 73
Query: 255 RLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
L FST R + + E S ++++ALE ++ E FP+T +DVF VL++
Sbjct: 74 ALRVRYHMAPFSTDERKSPAPSRREIELSKVVREALEPVVLAEEFPRTVIDVFLEVLQAD 133
Query: 426 GSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
G ++ ASLALADAGI M LV V+V + L++D
Sbjct: 134 GGTRTAAVTAASLALADAGIPMRALVGGVAVGKIQGVLVVD 174
[103][TOP]
>UniRef100_UPI000186CE6C Exosome complex exonuclease RRP41, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186CE6C
Length = 253
Score = 98.6 bits (244), Expect = 3e-19
Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK---KAM 236
+I + R DGR + R + G + GSAY E GNTKV+ +V+GP + + K +
Sbjct: 4 LISDQNLRLDGRRASELRQIRCKLGVFSQPDGSAYIEMGNTKVLAAVYGPHQVRGRTKPL 63
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQ----GSDHKEYSSMLQKALEGAIILESFPKTTVDVF 404
L D +NC S FST R + +E S L +AL AI E +PK+ +D+F
Sbjct: 64 L--DAAVINCQYSSAVFSTEERKKRPRGDKKSQEKSMHLCQALSAAIKTELYPKSQIDIF 121
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNL-IIDPISEEENC 572
VL+S G ++V++LAL DAGI + + VTS + S +N+ ++D EE+C
Sbjct: 122 VEVLQSDGGSFSAAVNVSTLALIDAGIPLKEYVTSCTASLANENIPLVDVTYLEESC 178
[104][TOP]
>UniRef100_Q9SP08 Exonuclease RRP41 n=1 Tax=Arabidopsis thaliana RepID=Q9SP08_ARATH
Length = 241
Score = 98.6 bits (244), Expect = 3e-19
Identities = 62/165 (37%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMLY 242
+ + R DGR F++ R G V+ A GSA E GNTKVI +V+GPRE +K
Sbjct: 4 VNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKK 63
Query: 243 SDTGRLNCNVSYTTFST-PVRGQGSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+D + C S FST R Q D + E S ++++ +E I+ E P + +D+F V
Sbjct: 64 NDHAVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEACILTELMPHSQIDIFLQV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L++ G I+ A+LALADAGI M DL S S L ++D
Sbjct: 124 LQADGGTRSACINAATLALADAGIPMRDLAVSCSAGYLNSTPLLD 168
[105][TOP]
>UniRef100_A5BIU1 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A5BIU1_VITVI
Length = 241
Score = 98.6 bits (244), Expect = 3e-19
Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYS 245
+ + R DGR + R GAV A GSA+ E GNTKVI +V+GPRE ++ S
Sbjct: 4 VSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQQIS 63
Query: 246 DTGRLNCNVSYTTFSTP--VRGQGSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D + C + FST +R D + E S ++++ +E I+ P++ +D+F V
Sbjct: 64 DQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L++ G I+ A+LALADAGI M DLVTS S L ++D
Sbjct: 124 LQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLD 168
[106][TOP]
>UniRef100_B4IEH2 GM25757 n=1 Tax=Drosophila sechellia RepID=B4IEH2_DROSE
Length = 246
Score = 98.6 bits (244), Expect = 3e-19
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K S
Sbjct: 7 LLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQTES 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+NC S TFST R D K E+ LQ+AL AI E +P++ +D++ V
Sbjct: 67 V---INCQYSQATFSTAERKNRPRGDRKSLEFKMYLQQALSAAIKSELYPRSQIDIYVEV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L+ G++ V ++ A+LAL DAGI + + + + + S N+ + IS+ E
Sbjct: 124 LQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFE 174
[107][TOP]
>UniRef100_B3NB10 GG10219 n=1 Tax=Drosophila erecta RepID=B3NB10_DROER
Length = 246
Score = 98.6 bits (244), Expect = 3e-19
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 4/174 (2%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 236
K ++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K
Sbjct: 4 KYELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKSKH 63
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVF 404
S +NC S TFST R D K E+ LQ+AL AI E +P++ +D++
Sbjct: 64 TESI---INCQYSQATFSTAERKYRPRGDRKSLEFKMYLQQALSAAIKSELYPRSQIDIY 120
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G++ V ++ A+LAL DAGI + + + + + S N+ + IS E
Sbjct: 121 VEVLQADGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISHFE 174
[108][TOP]
>UniRef100_Q9VK19 FI07225p n=1 Tax=Drosophila melanogaster RepID=Q9VK19_DROME
Length = 246
Score = 98.2 bits (243), Expect = 4e-19
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K S
Sbjct: 7 LLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQTES 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+NC S TFST R D K E+ LQ+AL AI E +P++ +D++ V
Sbjct: 67 V---INCQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L+ G++ V ++ A+LAL DAGI + + + + + S N+ + IS+ E
Sbjct: 124 LQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFE 174
[109][TOP]
>UniRef100_Q8SYC8 RE67757p n=1 Tax=Drosophila melanogaster RepID=Q8SYC8_DROME
Length = 246
Score = 98.2 bits (243), Expect = 4e-19
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K S
Sbjct: 7 LLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQTES 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+NC S TFST R D K E+ LQ+AL AI E +P++ +D++ V
Sbjct: 67 V---INCQYSQATFSTAERKNRPRGDRKSLEFKLYLQQALSAAIKSELYPRSQIDIYVEV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L+ G++ V ++ A+LAL DAGI + + + + + S N+ + IS+ E
Sbjct: 124 LQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFE 174
[110][TOP]
>UniRef100_Q64CA7 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos24D9
RepID=Q64CA7_9ARCH
Length = 242
Score = 98.2 bits (243), Expect = 4e-19
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 5/170 (2%)
Frame = +3
Query: 75 EDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTG 254
+D R GRGF + RP G + A GS Y E GN K + +V+GPRE + +
Sbjct: 10 KDGKRLSGRGFEELRPIKIEVGLLKRADGSCYFELGNNKALAAVYGPREMHPRH-FQNAK 68
Query: 255 RLNCNVSYTT--FSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLE 419
R Y FS R + G D + E S + +KAL+ I+ E +PKT ++V+ VL+
Sbjct: 69 RAVVKYRYNMAPFSVDDRKRPGPDRRSQEISMVSRKALDPVILRELYPKTAIEVYVEVLQ 128
Query: 420 SSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
S I+ AS+ALADAGI M DLV+SV++ + +++D ++E+N
Sbjct: 129 SDAGTRTAGINAASVALADAGIPMRDLVSSVAIGKIDGEVVLDLDAKEDN 178
[111][TOP]
>UniRef100_Q29KH8 GA13761 n=2 Tax=pseudoobscura subgroup RepID=Q29KH8_DROPS
Length = 249
Score = 97.8 bits (242), Expect = 5e-19
Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ E R DGR H+ R + G GSAY E GNTKV+ +V+GP ++K +
Sbjct: 7 LLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGMKTET 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQ--GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ +NC S TF+T R D K E+ L++AL AI E +P++ +D++ V
Sbjct: 67 NDVIINCQYSQATFATAERKNRPRGDRKSLEFKMYLEQALSAAIKSELYPRSQIDIYVEV 126
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G++ V ++ A+LAL DAGI + + + + + S ++ + IS E
Sbjct: 127 LQADGANYAVALNAATLALIDAGICLNEFIVACTASLSKSSIPLTDISHTE 177
[112][TOP]
>UniRef100_Q2NEX5 Putative exosome complex, exonuclease 1 subunit n=1
Tax=Methanosphaera stadtmanae DSM 3091
RepID=Q2NEX5_METST
Length = 232
Score = 97.4 bits (241), Expect = 7e-19
Identities = 60/168 (35%), Positives = 92/168 (54%), Gaps = 4/168 (2%)
Frame = +3
Query: 78 DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTG 254
++ R DGR ++ R G +N A GSAY E GN K++V V+GPRE K D
Sbjct: 4 EFIRKDGRAYNTLRNMKMEVGVLNNADGSAYIECGNNKILVGVYGPREIHSKKHSKPDGA 63
Query: 255 RLNCNVSYTTFSTPVR---GQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
L C + FS R G E S ++ +A+ I LE +P+ ++D+ VLE+
Sbjct: 64 VLRCKYNMAPFSVKERKRPGPNRRSTEISKLISEAITPNIFLEKYPRASIDISIEVLEAE 123
Query: 426 GSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
G + I ASLALADA I M DL+++ +V + ++++D +SE+E+
Sbjct: 124 GGTRCLGIVGASLALADAEIPMKDLISACAVGKVDDHIVLD-LSEQED 170
[113][TOP]
>UniRef100_Q0W2Y8 Putative exosome complex exonuclease 1 n=1 Tax=uncultured
methanogenic archaeon RC-I RepID=Q0W2Y8_UNCMA
Length = 253
Score = 97.4 bits (241), Expect = 7e-19
Identities = 61/175 (34%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM 236
KP + D R DGRG RP F+ G + A GS Y EFG KV+ +V+GPRE
Sbjct: 3 KPEKLIVDGKRLDGRGPFDLRPIKFQAGVLKRADGSCYLEFGGNKVMAAVYGPREVHPRH 62
Query: 237 LYSDTGRL-NCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVF 404
L + + + +FS R + G D + E S + ++ALE I+ E +P++ +D+F
Sbjct: 63 LQQASNAIVRYRYNMASFSVEERKRPGPDRRSIEISKVSREALESVILKELYPRSAIDIF 122
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L++ I+ AS+ALADAGI M LV++ +V L++D +E+N
Sbjct: 123 VEILQADAGTRVAGINAASVALADAGIPMKCLVSACAVGKADDTLVLDLNKDEDN 177
[114][TOP]
>UniRef100_Q8TYC1 Probable exosome complex exonuclease 1 n=1 Tax=Methanopyrus
kandleri RepID=ECX1_METKA
Length = 239
Score = 97.4 bits (241), Expect = 7e-19
Identities = 61/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
+I ED R DGR + RP + G + A GSAY E G K++ +V+GPRE +
Sbjct: 8 LISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQK 67
Query: 243 SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D + + FS R + G D + E S + ++ALE AI E +P+T +D+F V
Sbjct: 68 PDRAVVRFRYNMAPFSVDERKRPGPDRRSIEISKLSKEALEPAIFTEYYPRTAIDIFVEV 127
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ IS AS+ALADAGI M DLV + + + +++DP+ E+
Sbjct: 128 LQADAGTRCAGISAASVALADAGIEMRDLVAACAAGKVEGKVVLDPMYYED 178
[115][TOP]
>UniRef100_B7P8R1 Exosomal 3'-5' exoribonuclease complex, subunit Rrp41, putative n=1
Tax=Ixodes scapularis RepID=B7P8R1_IXOSC
Length = 246
Score = 97.1 bits (240), Expect = 9e-19
Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ ++ R DGR ++ R R G + A GSAY E GN KV+ +V+GP E + ++
Sbjct: 6 LLSDEGYRLDGRKPNEQRKIDCRLGVFSQADGSAYIEQGNAKVLAAVYGPHEPRGNRSRA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQ----GSDHKEYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + +E + +Q+ E I+ + +P++ +D+F
Sbjct: 66 LHDRVLVNCQFSMATFSTFERKRRPRGDKKSQEMTLHIQQTFEATILTQLYPRSQIDIFV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
VL+S G L V ++ A+LAL DAGI + D V + SV + ++D S EE+
Sbjct: 126 EVLQSDGGTLSVCVNAATLALIDAGIALKDYVCACSVGFIDGVPLVDISSIEES 179
[116][TOP]
>UniRef100_C8S7M6 Exosome complex exonuclease 1 n=1 Tax=Ferroglobus placidus DSM
10642 RepID=C8S7M6_FERPL
Length = 245
Score = 97.1 bits (240), Expect = 9e-19
Identities = 59/168 (35%), Positives = 93/168 (55%), Gaps = 4/168 (2%)
Frame = +3
Query: 78 DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGR 257
D R DGR + RP G + A GS Y E G KV+ +V+GPR+ + L T
Sbjct: 10 DGRRIDGRLPDELRPIKIEAGVLKNADGSCYLEMGKNKVMAAVYGPRKVQPKHLADPTQA 69
Query: 258 L-NCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
+ + FS R + G D + E S + ++ALE I+ E FP++++D+F VL++
Sbjct: 70 IVRYRYNMAPFSVEERKRPGPDRRSVEISKVSREALESIIMKELFPRSSIDIFVEVLQAD 129
Query: 426 GSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
++ AS+AL DAGI M ++TSV+V+ + L++DP+ EE+N
Sbjct: 130 AGSRTACLNAASVALVDAGIPMKGIITSVAVAKVDGVLVLDPMKEEDN 177
[117][TOP]
>UniRef100_B9I8T9 Predicted protein n=2 Tax=Populus RepID=B9I8T9_POPTR
Length = 241
Score = 96.7 bits (239), Expect = 1e-18
Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 5/165 (3%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYS 245
+ + R DGR + R + GAV A GSA E GNTKVI +V+GPRE ++ +
Sbjct: 4 VNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQIN 63
Query: 246 DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D + C S FST R + D + E S ++++A+E I+ P++ +D++ V
Sbjct: 64 DQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIYVQV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L++ G I+ A+LALADAGI M DLVTS S L ++D
Sbjct: 124 LQADGGTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLD 168
[118][TOP]
>UniRef100_Q4P5R4 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P5R4_USTMA
Length = 297
Score = 96.3 bits (238), Expect = 2e-18
Identities = 66/193 (34%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Frame = +3
Query: 21 ATYTPSPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIV 200
+T TP TT ++ RPD R + Q RP F +T V +ASGS+Y E G+ K+
Sbjct: 26 STSTPVATTSQQ----------RPDQRSYSQLRPIFLQTHLVPSASGSSYVEIGDLKLAC 75
Query: 201 SVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVR---GQGSDHKEYSSMLQKALEGAIIL 371
SVFGPR+ K YS LN V + FS+ R G+ ++ S +L +AL ++ L
Sbjct: 76 SVFGPRQ-VKGRQYSGKAELNVEVKFAPFSSRRRRRPGKTTESAHLSGLLHQALLPSLRL 134
Query: 372 ESFPKTTVDVFALVLESSG---SDLPVVISVASLALADAGILMYDLVTSV------SVSC 524
+ PK ++D+ +VL++ G S + A+ ALA AGI MY LV +
Sbjct: 135 DLLPKASLDIHIMVLQTDGLEESCIAAACIAATTALASAGIEMYGLVVGCVALVPSTTDS 194
Query: 525 LGKNLIIDPISEE 563
K +++DP S +
Sbjct: 195 KDKQVLVDPSSAD 207
[119][TOP]
>UniRef100_A4YCV2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=A4YCV2_METS5
Length = 245
Score = 96.3 bits (238), Expect = 2e-18
Identities = 58/176 (32%), Positives = 98/176 (55%), Gaps = 4/176 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-K 230
+KP +I +D R DGR + RP G + A GS+ E GNTK+I +V+GPRE +
Sbjct: 5 QKPKLILDDGRRLDGRRPDELRPMKMEIGVLKNADGSSLVEVGNTKIIAAVYGPREMHPR 64
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDV 401
+ + L T FST R + E S ++++ALE +I++E FP++++DV
Sbjct: 65 HLALPNRATLRVRYHMTPFSTDERKSPVPSRREIELSKVIREALESSILVEQFPRSSIDV 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
F V+++ + ASLA+ DAGI + D++ +V+V +++D ++E E+
Sbjct: 125 FMEVIQADAGTRLASLMAASLAVVDAGIPVKDVIAAVAVGKADGVVVLD-LNEPED 179
[120][TOP]
>UniRef100_Q64D55 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos19A5
RepID=Q64D55_9ARCH
Length = 247
Score = 96.3 bits (238), Expect = 2e-18
Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Frame = +3
Query: 51 KKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKK 230
K++ +IK D R DGRGF + RP G + A GS Y E G+ KVI +V+GPRE
Sbjct: 2 KEEIELIK-DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGDNKVIAAVYGPREMHP 60
Query: 231 AMLY-SDTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVD 398
+ + + FST R + G D + E S + ++A + I+ E +PK ++
Sbjct: 61 RHAQDAKMAVVKFRYNMAPFSTDDRKRPGPDRRSVEISKVCREAFDPVIMRELYPKMGIE 120
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
V+ +L+S I+ AS+ALADAGI M DLV+S++V + +++D + E+N
Sbjct: 121 VYVELLQSDAGTRTAGINAASIALADAGIPMKDLVSSIAVGKINGEMVLDLNAAEDN 177
[121][TOP]
>UniRef100_Q8BTW3 Exosome complex exonuclease MTR3 n=1 Tax=Mus musculus
RepID=EXOS6_MOUSE
Length = 273
Score = 96.3 bits (238), Expect = 2e-18
Identities = 66/183 (36%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Frame = +3
Query: 75 EDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT- 251
ED P R + RP + R G ++ A GSAY E G TKV+ +V GPR+++ S
Sbjct: 23 EDDETPAARDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGSGPA 82
Query: 252 -----------GRLNCNVSYTTFSTPVR----GQGSDHKEYSSMLQKALEGAIILESFPK 386
GRL C+ FS R G G + +E LQ+ALE A+ L +P+
Sbjct: 83 GAGGEAPAALRGRLLCDFRRAPFSGRRRRAPQGGGGEDRELGLALQEALEPAVRLGRYPR 142
Query: 387 TTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL---GKNLIIDPIS 557
++V AL+LE G L ++ A+LALADAG+ MYDLV +S ++DP
Sbjct: 143 AQLEVSALLLEDGGCALAAALTAAALALADAGVEMYDLVVGCGLSLTPGPSPTWLLDPTR 202
Query: 558 EEE 566
EE
Sbjct: 203 LEE 205
[122][TOP]
>UniRef100_Q6MZC1 Ribonuclease PH n=1 Tax=uncultured archaeon RepID=Q6MZC1_9ARCH
Length = 242
Score = 95.9 bits (237), Expect = 2e-18
Identities = 59/169 (34%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Frame = +3
Query: 75 EDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDT 251
+D R GRGF + RP G + A GS Y E G+ K + +V+GPRE + +
Sbjct: 10 KDGKRLSGRGFEELRPIKIDVGVLKRADGSCYFELGDNKALAAVYGPREMHPRHFQNAKM 69
Query: 252 GRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLES 422
+ + FS R + G D + E S + +KAL+ I+ E +PKT ++V+ VL+S
Sbjct: 70 AVVKYRYNMAPFSVDDRKRPGPDRRSQEISMVSRKALDPVILRELYPKTAIEVYVEVLQS 129
Query: 423 SGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
I+ AS+ALADAGI M DLV+SV++ + +++D ++E+N
Sbjct: 130 DAGTRTAGINAASVALADAGIPMRDLVSSVAIGKIDGEVVLDLDAKEDN 178
[123][TOP]
>UniRef100_UPI0001862F93 hypothetical protein BRAFLDRAFT_218985 n=1 Tax=Branchiostoma
floridae RepID=UPI0001862F93
Length = 244
Score = 95.5 bits (236), Expect = 3e-18
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM--L 239
II + R DGR + R R G A GSAY E GNTK + +V+GP E +K +
Sbjct: 6 IISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRKGRGKI 65
Query: 240 YSDTGRLNCNVSYTTFST---PVRGQGSDHKEYSSM-LQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R +G + SM L++ E I+ E FP++ +D++
Sbjct: 66 QHDRAVVNCQFSMATFSTGERKSRPKGDRRSQEMSMHLRQTFEAVIVTELFPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L++ G + ++ A+LA+ DAGI M D V + + + + ++D EE+
Sbjct: 126 QILQADGGNYCACVNAATLAVIDAGIPMKDYVCACTAGFIQDSPLLDISYVEES 179
[124][TOP]
>UniRef100_C3XU58 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XU58_BRAFL
Length = 246
Score = 95.5 bits (236), Expect = 3e-18
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM--L 239
II + R DGR + R R G A GSAY E GNTK + +V+GP E +K +
Sbjct: 6 IISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRKGRGKI 65
Query: 240 YSDTGRLNCNVSYTTFST---PVRGQGSDHKEYSSM-LQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R +G + SM L++ E I+ E FP++ +D++
Sbjct: 66 QHDRAVVNCQFSMATFSTGERKSRPKGDRRSQEMSMHLRQTFEAVIVTELFPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L++ G + ++ A+LA+ DAGI M D V + + + + ++D EE+
Sbjct: 126 QILQADGGNYCACVNAATLAVIDAGIPMKDYVCACTAGFIQDSPLLDISYVEES 179
[125][TOP]
>UniRef100_UPI00003608A8 UPI00003608A8 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00003608A8
Length = 245
Score = 95.1 bits (235), Expect = 3e-18
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTKV+ V+GP E + ++
Sbjct: 6 LLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKVLAVVYGPHEMRGSRSRA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E S L++ E A++ + FP++ +D++
Sbjct: 66 RHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+L+S G + V ++ A+LA+ DAGI M D V + +V + + + D EE
Sbjct: 126 KILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEE 178
[126][TOP]
>UniRef100_Q6L223 Ribonuclease PH n=1 Tax=Picrophilus torridus RepID=Q6L223_PICTO
Length = 239
Score = 95.1 bits (235), Expect = 3e-18
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
+I +D R DGR F++ RP TG V+ A GSAY E+G K++V+V+ K
Sbjct: 6 LINDDGLRLDGRAFNEMRPIRITTGVVDNADGSAYIEWGANKIVVAVYVREAYPKHAQNI 65
Query: 246 DTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVL 416
D + + FS R + G D + E S ++ +ALE AI++E P+ +DV+ VL
Sbjct: 66 DKAIVKARYNMAGFSVEERKRPGPDRRTMEISKLISEALESAIMVERLPRAEIDVYIEVL 125
Query: 417 ESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
E+ ++ AS+A+ADAGI M DL + +++D +E+N D
Sbjct: 126 EADAGTRIASLTAASVAVADAGIPMKDLPVGCTAGKANGKVVLDLSKDEDNYGD 179
[127][TOP]
>UniRef100_C6TJ02 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TJ02_SOYBN
Length = 190
Score = 94.7 bits (234), Expect = 4e-18
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYS 245
+ + R DGR + R GAV+ A GSA E GNTKVI +V+GPRE + S
Sbjct: 4 VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQQIS 63
Query: 246 DTGRLNCNVSYTTFSTP--VRGQGSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ C S FST +R D + E S ++++ +E I+ P++ +D++ V
Sbjct: 64 SHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIYVQV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L++ G I+ A+LALADAGI M DLVTS S L ++D
Sbjct: 124 LQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLD 168
[128][TOP]
>UniRef100_B9SWZ0 Exosome complex exonuclease RRP41, putative n=1 Tax=Ricinus
communis RepID=B9SWZ0_RICCO
Length = 241
Score = 94.7 bits (234), Expect = 4e-18
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYS 245
+ + R DGR + R + GAV+ A GSA E GNTKVI +V+GPRE ++
Sbjct: 4 VSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQQII 63
Query: 246 DTGRLNCNVSYTTFSTP--VRGQGSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D + C + FST +R D + E S ++++ +E I+ P++ +D++ V
Sbjct: 64 DQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIYVQV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L++ G I+ A+LALADAGI M DLVTS S L ++D
Sbjct: 124 LQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLD 168
[129][TOP]
>UniRef100_C4WSG4 ACYPI001085 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSG4_ACYPI
Length = 213
Score = 94.7 bits (234), Expect = 4e-18
Identities = 61/173 (35%), Positives = 95/173 (54%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAML 239
++ R DGR + R + G N GSAY E GNTKV+ +++GP E + +A
Sbjct: 3 LLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRAKA 62
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQGS-DHK--EYSSMLQKALEGAIILESFPKTTVDVFAL 410
+D+ +NC S TFS R + D+K E + L++A+ AI + +PK+ +D+F
Sbjct: 63 PNDSAVINCQYSMATFSRSERKRRPRDNKSAELTLHLKQAMATAIKTDLYPKSQIDIFVQ 122
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL-GKNLIIDPISEEE 566
VL+S G + V ++ A+LAL DAGI M + V S + S G+ ++D EE
Sbjct: 123 VLQSDGGNYSVCVNAATLALIDAGIAMEEFVISCTSSLANGETPLVDISHLEE 175
[130][TOP]
>UniRef100_UPI0000E47A9B PREDICTED: similar to exosome component 6, partial n=1
Tax=Strongylocentrotus purpuratus RepID=UPI0000E47A9B
Length = 203
Score = 94.4 bits (233), Expect = 6e-18
Identities = 56/148 (37%), Positives = 80/148 (54%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQG 311
+ GAV+ A GS Y E NTKVI +V+GPRE + + G+L C + TF+
Sbjct: 2 KAGAVSQAKGSCYMEMKNTKVICAVYGPREVPRRDGFIINGQLRCEFKFATFA------- 54
Query: 312 SDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILM 491
S+HK PK+ VD+F VLE+ GS L I+ AS+A+A+AGI M
Sbjct: 55 SEHK------------------IPKSQVDIFITVLENDGSVLSAAITCASIAVANAGIEM 96
Query: 492 YDLVTSVSVSCLGKNLIIDPISEEENCQ 575
YDLV S+ G+ L++DP + +E +
Sbjct: 97 YDLVIGSSLRQTGETLLLDPTAFDETAE 124
[131][TOP]
>UniRef100_B3RL48 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RL48_TRIAD
Length = 243
Score = 94.4 bits (233), Expect = 6e-18
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLY 242
II + R DGR + R R G ++ A GSAY E GNTK + S+ GP ++ KA +
Sbjct: 3 IISPEGLRIDGRRPEEIRRFNCRLGVLSRADGSAYLEQGNTKALASINGPHQAGDKAKIK 62
Query: 243 SDTGRLNCNVSYTTFSTPVRG---QGSDHK-EYSSMLQKALEGAIILESFPKTTVDVFAL 410
D +N S TFST R +G + S ++++ + AI+ + +PK+ +D+
Sbjct: 63 HDRVHINFQYSMATFSTNERRNRPKGDKRSIDISQLMREIFQSAILTDLYPKSQIDIHVQ 122
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+L++ G + I+ A+LAL DAG+ M D + S + S + IID + EE
Sbjct: 123 ILQADGGNYSACINAATLALMDAGVPMKDFICSCTASLVDSKTIIDVNNSEE 174
[132][TOP]
>UniRef100_UPI00017B08EC UPI00017B08EC related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B08EC
Length = 245
Score = 94.0 bits (232), Expect = 8e-18
Identities = 58/174 (33%), Positives = 92/174 (52%), Gaps = 6/174 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + ++
Sbjct: 6 LLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRGSRSRA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E S L++ E A++ + FP++ +D++
Sbjct: 66 RHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLFPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L+S G + V ++ A+LA+ DAGI M D V + +V + + + D EE+
Sbjct: 126 KILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEES 179
[133][TOP]
>UniRef100_UPI000038E13A exosome complex exonuclease Rrp41 n=1 Tax=Ferroplasma acidarmanus
fer1 RepID=UPI000038E13A
Length = 240
Score = 93.6 bits (231), Expect = 1e-17
Identities = 55/171 (32%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
+++ED R DGR ++ RP +TG V A GSA+ E+G K+IV+V+ K
Sbjct: 7 LMREDGLRLDGRSLNEMRPIKIQTGVVERADGSAFIEWGANKIIVAVYVREAYPKHAQNI 66
Query: 246 DTGRLNCNVSYTTFSTPVRGQ-GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVL 416
D + + + +S R + G D + E S ++ +AL AI+LE P+ +DVF VL
Sbjct: 67 DRAIVKARYNMSGYSVEERKRPGPDRRTMEISKVVSEALSSAIVLEKLPRAEIDVFIQVL 126
Query: 417 ESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
E+ ++ +S+A+ADAG+ M DLV + +++D +E+N
Sbjct: 127 EADAGTRIASLTASSVAVADAGVPMRDLVVGCTAGKADGKIVLDLSKDEDN 177
[134][TOP]
>UniRef100_A4RVY5 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4RVY5_OSTLU
Length = 240
Score = 93.2 bits (230), Expect = 1e-17
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R D R CR V AA+GSAY E G+TK +V+GPR + + D G L+
Sbjct: 8 REDARADAHCRALVVALDVVPAAAGSAYVELGDTKASCAVYGPRRGRAELAGVDRGTLDV 67
Query: 267 NVSYTTFSTPVR-----------GQGSDHKE--YSSMLQKALEGAIILESFPKTTVDVFA 407
+ F+T R G+G+ + + +++AL +++ ESFPKT VD
Sbjct: 68 DAYRAPFATGARALDGANRARARGRGARTADDGLARTVKEALSASVLTESFPKTQVDACV 127
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
VL++ G + + AS ALA AG+ DLV++ + G+ +++DP EE D
Sbjct: 128 TVLDARGGEAVACVLAASAALARAGVACRDLVSACECARAGERMMLDPTREEIETSD 184
[135][TOP]
>UniRef100_Q16KB4 Exosome complex exonuclease RRP41, putative n=1 Tax=Aedes aegypti
RepID=Q16KB4_AEDAE
Length = 245
Score = 93.2 bits (230), Expect = 1e-17
Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ ++ R DGR ++ R + G + GSAY E GNTKV+ +V+GP ++
Sbjct: 3 LLSDEGLRLDGRRANELRRIQCKLGVFSQPDGSAYIEQGNTKVLAAVYGPHQAPAKKSSH 62
Query: 246 DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ +NC S TFST R + D K E + LQ+AL AI E +PK+ +DV+ V
Sbjct: 63 EEVIVNCQYSMATFSTGERKRRPRGDRKSQEMTIHLQQALSAAIKTELYPKSQIDVYIEV 122
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L + G + ++ A+LAL DAGI + + V + + S GK ++D + EE
Sbjct: 123 LMADGGNYCASVNAATLALIDAGICLKEYVCACTASLAGKIPLMDVSNLEE 173
[136][TOP]
>UniRef100_UPI000036A8A7 PREDICTED: homolog of yeast mRNA transport regulator 3 n=1 Tax=Pan
troglodytes RepID=UPI000036A8A7
Length = 272
Score = 92.8 bits (229), Expect = 2e-17
Identities = 63/177 (35%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Frame = +3
Query: 90 PDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT------ 251
P R + RP + R G ++ A GSAY E G TKV+ +V GPR+++ S
Sbjct: 28 PGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGSGPAGAGGE 87
Query: 252 ------GRLNCNVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVF 404
GRL C+ F+ R G + +E + LQ+ALE A+ L +P+ ++V
Sbjct: 88 APAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVS 147
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL---GKNLIIDPISEEE 566
AL+LE GS L ++ A+LALADAG+ MYDLV +S ++DP EE
Sbjct: 148 ALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEE 204
[137][TOP]
>UniRef100_UPI00001D1497 PREDICTED: similar to Mtr3 (mRNA transport regulator 3)-homolog n=2
Tax=Rattus norvegicus RepID=UPI00001D1497
Length = 312
Score = 92.8 bits (229), Expect = 2e-17
Identities = 68/183 (37%), Positives = 95/183 (51%), Gaps = 18/183 (9%)
Frame = +3
Query: 72 KEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT 251
+ED T P R + RP + R G ++ A GSAY E G TKV+ +V GPR+++
Sbjct: 63 EEDET-PAARDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGP 121
Query: 252 ------------GRLNCNVSYTTFSTPVRG--QGS-DHKEYSSMLQKALEGAIILESFPK 386
GRL C+ FS R QGS + +E LQ+ALE A+ L +P+
Sbjct: 122 AGAGGEAPAALRGRLLCDFRRAPFSGRRRRAPQGSSEDRELGLALQEALEPAVRLGRYPR 181
Query: 387 TTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL---GKNLIIDPIS 557
++V AL+LE GS L ++ A+LALADAG+ MYDLV +S ++DP
Sbjct: 182 AQLEVSALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLTPGPSPTWLLDPTR 241
Query: 558 EEE 566
EE
Sbjct: 242 LEE 244
[138][TOP]
>UniRef100_A7S1D9 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S1D9_NEMVE
Length = 247
Score = 92.8 bits (229), Expect = 2e-17
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLY 242
++ + R DGR + R + G ++ A GSAY E GNTK + +V+GP E KA
Sbjct: 6 VLSPEGLRIDGRKASELRKMVCKVGVLSQADGSAYIEMGNTKALATVYGPHEVQNKAKAL 65
Query: 243 SDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFAL 410
D LN TFST R + D K E S M+++ E AI++ +P++ +D++
Sbjct: 66 HDRVLLNVQFGMATFSTGERKKKPRGDRKATELSMMVRRTFEAAILINLYPRSQIDIYVQ 125
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
VL++ G + I+ +LAL +AGI + D V++ +VS + ++D
Sbjct: 126 VLQADGGNHVACINAVTLALINAGIPLKDYVSACTVSFVNDTPLMD 171
[139][TOP]
>UniRef100_B0XII7 Exosome complex exonuclease RRP41 n=1 Tax=Culex quinquefasciatus
RepID=B0XII7_CULQU
Length = 245
Score = 92.4 bits (228), Expect = 2e-17
Identities = 58/171 (33%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ ++ R DGR ++ R + G + GSAY E GNTKV+ +V+GP ++
Sbjct: 3 LLSDEGLRLDGRRSNELRRIQCKLGVFSQPDGSAYVEQGNTKVLAAVYGPHQAPAKKSNH 62
Query: 246 DTGRLNCNVSYTTFSTPVRGQ--GSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ +NC S TFST R + D K E + LQ+AL AI + +PK+ +DV+ V
Sbjct: 63 EECVVNCQYSMATFSTGERKKRPRGDRKSQEMTIHLQQALSAAIKTDLYPKSQIDVYIEV 122
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L + G + ++ A+LAL DAGI + + V + + S GK ++D + EE
Sbjct: 123 LMADGGNYCASVNAATLALIDAGICLKEYVCACTASLAGKVPLMDVSNLEE 173
[140][TOP]
>UniRef100_UPI00004A47DA PREDICTED: similar to homolog of yeast mRNA transport regulator 3
n=1 Tax=Canis lupus familiaris RepID=UPI00004A47DA
Length = 272
Score = 91.7 bits (226), Expect = 4e-17
Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 18/177 (10%)
Frame = +3
Query: 90 PDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT------ 251
P R + RP + R G ++ A GSAY E G TKV+ +V GPR+++ +
Sbjct: 28 PAARDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGSERGGGPAGAGGE 87
Query: 252 ------GRLNCNVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVF 404
GRL C+ F+ R G + +E + LQ+ALE A+ L +P+ ++V
Sbjct: 88 APAALRGRLLCDFRRAPFAGRRRRAPPGGGEERELALALQEALEPAVRLGRYPRAQLEVS 147
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL---GKNLIIDPISEEE 566
AL+LE GS L ++ A+LALADAG+ MYDLV +S ++DP EE
Sbjct: 148 ALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSRTPEPAPTWLLDPTRLEE 204
[141][TOP]
>UniRef100_Q5KA82 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q5KA82_CRYNE
Length = 268
Score = 91.7 bits (226), Expect = 4e-17
Identities = 69/199 (34%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Frame = +3
Query: 18 PATYTPSPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVI 197
P Y P P + P+ TR D R + RP F +TG ++ A GS Y E G K+
Sbjct: 17 PPVYEPLPNDAQAGPS------TRTD-RTDQESRPIFLKTGLISQAHGSGYIEAGGVKIA 69
Query: 198 VSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAII 368
SV+GPR K YS G LN V + F++ R + ++ S++L + L +
Sbjct: 70 CSVYGPR--PKPPPYSPQGTLNLEVKFAPFASDPRRAPLRDTEPLPLSNLLTQLLLPTLH 127
Query: 369 LESFPKTTVDVFALVLESS--GSDLPVVISVASLALADAGILMYDLVTSVSVSCLG---- 530
L PK+++DV+ LVLES + L ++VAS A+ADAGI M L V+ +G
Sbjct: 128 LHLLPKSSIDVYLLVLESDTLTNVLSAGLTVASAAVADAGIEMAGLGVGGVVASVGGDEK 187
Query: 531 ---KNLIIDPISEEENCQD 578
+ ++IDP EEE D
Sbjct: 188 QGRRRVVIDPSLEEEKESD 206
[142][TOP]
>UniRef100_Q9P7R3 Exosome complex component mtr3 n=1 Tax=Schizosaccharomyces pombe
RepID=MTR3_SCHPO
Length = 257
Score = 91.7 bits (226), Expect = 4e-17
Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Frame = +3
Query: 99 RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSY 278
R +CR + + G A GS+Y E K+ +V GPR SK + + +LNC
Sbjct: 30 RDVDRCRKIYLKLGWATKAVGSSYFESEKIKIACTVSGPRPSK-TFAFRSSAKLNCEFRL 88
Query: 279 TTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSG--SDLPV 443
+ FST VR Q + K YS M++ A+ +I+L +PK+++DV+ V+ES G + L
Sbjct: 89 SPFSTSVRQGHVQTVEEKSYSQMIEAAISPSILLHLYPKSSIDVYIQVIESDGALATLAA 148
Query: 444 VISVASLALADAGILMYDLVTSVSV 518
IS AS A+ADA I DLVT SV
Sbjct: 149 AISCASSAIADANIDCIDLVTGSSV 173
[143][TOP]
>UniRef100_Q5RKV6 Exosome complex exonuclease MTR3 n=1 Tax=Homo sapiens
RepID=EXOS6_HUMAN
Length = 272
Score = 91.3 bits (225), Expect = 5e-17
Identities = 62/177 (35%), Positives = 90/177 (50%), Gaps = 18/177 (10%)
Frame = +3
Query: 90 PDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT------ 251
P R + RP + R G ++ A GSAY E G TKV+ +V GPR+++
Sbjct: 28 PGTRDPTRLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRQAEGGERGGGPAGAGGE 87
Query: 252 ------GRLNCNVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVF 404
GRL C+ F+ R G + +E + LQ+ALE A+ L +P+ ++V
Sbjct: 88 APAALRGRLLCDFRRAPFAGRRRRAPPGGCEERELALALQEALEPAVRLGRYPRAQLEVS 147
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCL---GKNLIIDPISEEE 566
AL+LE GS L ++ A+LALADAG+ MYDLV +S ++DP EE
Sbjct: 148 ALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLSLAPGPAPTWLLDPTRLEE 204
[144][TOP]
>UniRef100_A9UUZ6 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UUZ6_MONBE
Length = 214
Score = 90.9 bits (224), Expect = 6e-17
Identities = 49/136 (36%), Positives = 82/136 (60%), Gaps = 3/136 (2%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTP 296
R +TG V+ A+GS + E G TKV+V+ +GP E+ +A +SD G L C+++ F+
Sbjct: 21 RSLALQTGVVSRAAGSCFLEMGRTKVMVACYGPEEAARAGTFSDMGVLECHITRAPFAEQ 80
Query: 297 VRG--QGSD-HKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLA 467
R Q +D + L ++ AI+LE +PK+T+ + A +LE G LP ++ +S A
Sbjct: 81 KRATLQETDADRGLRRDLDAMIKPAILLEKYPKSTIALQATILEDDGGVLPALVMASSTA 140
Query: 468 LADAGILMYDLVTSVS 515
L +AGI + D+VT+++
Sbjct: 141 LVEAGIELRDIVTAIA 156
[145][TOP]
>UniRef100_B5X813 Exosome complex exonuclease RRP41 n=1 Tax=Salmo salar
RepID=B5X813_SALSA
Length = 245
Score = 90.5 bits (223), Expect = 8e-17
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + ++
Sbjct: 6 LLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRGSRSKT 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E S L++ E A++ +P++ +D++
Sbjct: 66 LHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L+S G + ++ A+LA+ DAGI M D V + + + + + D EE+
Sbjct: 126 KILQSDGGNYSACVNAATLAVVDAGIPMRDYVCACTAGFVDETPLADLCHAEES 179
[146][TOP]
>UniRef100_UPI0000EDBA5C PREDICTED: similar to Chain C, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0000EDBA5C
Length = 245
Score = 90.1 bits (222), Expect = 1e-16
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ ++ R DGR + R R G A GSAY E GNTK + V+GP E + ++
Sbjct: 6 LLSDEGYRVDGRRAGELRKIEARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRGLRSRA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E S LQ+ E AI+ + +P++ +D++
Sbjct: 66 LPDRALVNCQFSMATFSTGERKRRPHGDRKATEMSQHLQQTFEDAILTQLYPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+L++ G + ++ A+LA+ DAGI + D V + S + + D EE
Sbjct: 126 QILQADGGNYAACVNAATLAVLDAGIPLRDFVCASSAGFVEDTPLADLSYVEE 178
[147][TOP]
>UniRef100_UPI00006A4B1C PREDICTED: similar to LOC495942 protein n=1 Tax=Ciona intestinalis
RepID=UPI00006A4B1C
Length = 247
Score = 90.1 bits (222), Expect = 1e-16
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAM--- 236
+I ++ R DGR + R G A GSAY E GNTKV+ +++GP E+ M
Sbjct: 6 LISDEGYRFDGRKPSELRRVRCNMGVFTQADGSAYIEQGNTKVLAAIYGPHEASNNMRSR 65
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQGS----DHKEYSSMLQKALEGAIILESFPKTTVDVF 404
+ D +NC S FS+ R + S K+ S+ +++ E A+ + +P++ +D++
Sbjct: 66 VCLDKCFINCEFSQAMFSSAERKKRSRGDRKGKDMSAHIKQTFEAAVRTQLYPRSQIDIY 125
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL S GS ++ A+LAL DAGI M D V + S S + +ID EE
Sbjct: 126 LQVLHSDGSLYCACVNAATLALIDAGIAMKDYVCACSASLTKETSLIDINHVEE 179
[148][TOP]
>UniRef100_C1BWS7 Exosome complex exonuclease RRP41 n=1 Tax=Esox lucius
RepID=C1BWS7_ESOLU
Length = 245
Score = 90.1 bits (222), Expect = 1e-16
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 6/174 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + ++
Sbjct: 6 LLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRMSRSKT 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E S L++ E A++ +P++ +D++
Sbjct: 66 LHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L+S G + ++ A+LA+ DAGI M D V + + + + + D EE+
Sbjct: 126 KILQSDGGNYSACVNAATLAVIDAGIPMRDYVCACTAGFVDETPLADLCHAEES 179
[149][TOP]
>UniRef100_B9G2C8 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9G2C8_ORYSJ
Length = 242
Score = 90.1 bits (222), Expect = 1e-16
Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMLYSDTGRL 260
R DGR ++ R G V A GSA E GNT+VI +V+GPRE +K + S +
Sbjct: 11 RVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSKDALV 70
Query: 261 NCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
C FST R + D + E S ++++ +E +I+ P++ +D+F VL++ G
Sbjct: 71 RCEYRMADFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQIDIFVQVLQADG 130
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
I+ A+LALADAGI M D+VTS S L ++D
Sbjct: 131 GTRAACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLD 170
[150][TOP]
>UniRef100_A8E4R4 EXOSC6 protein n=1 Tax=Bos taurus RepID=A8E4R4_BOVIN
Length = 272
Score = 90.1 bits (222), Expect = 1e-16
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Frame = +3
Query: 90 PDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT------ 251
P R + RP + R G ++ A GSAY E G TKV+ +V GPR ++
Sbjct: 28 PAPRDPARLRPVYARAGLLSQAKGSAYLEAGGTKVLCAVSGPRPAEGGERGGGPAGAGGE 87
Query: 252 ------GRLNCNVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIILESFPKTTVDVF 404
GRL C+ FS R G + +E + LQ+ALE A+ L +P+ ++V
Sbjct: 88 APAALRGRLLCDFRRAPFSGRRRRAPPGGGEERELALALQEALEPAVRLGRYPRAQLEVS 147
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVS 521
AL+LE GS L ++ A+LALADAG+ MYDLV +S
Sbjct: 148 ALLLEDGGSALAAALTAAALALADAGVEMYDLVVGCGLS 186
[151][TOP]
>UniRef100_Q54EU6 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
RepID=Q54EU6_DICDI
Length = 247
Score = 90.1 bits (222), Expect = 1e-16
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKA 233
K + I + R DGR ++ R G A GSAY E GNTK+I +V+GPRE S
Sbjct: 3 KLSYISPEGLRIDGRRANELRRINVEMGIFKRADGSAYYEQGNTKIIAAVYGPREISVSG 62
Query: 234 MLYSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTV 395
D + C S ++FST R K E ++++++A E I +P++ +
Sbjct: 63 KGVFDRAVVKCEFSSSSFSTTERKPQQKTKGDRVTTEIANLVKQAFESTIHTHLYPRSQI 122
Query: 396 DVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+++ VL+S G I+ ++LAL DAGI M D + + S SC+ ++D + EE
Sbjct: 123 NIYLQVLQSDGGLKAAAINASTLALIDAGISMKDFICACSTSCIDGIAVLDLNNIEE 179
[152][TOP]
>UniRef100_UPI00005EC0D3 PREDICTED: similar to Chain G, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Monodelphis domestica
RepID=UPI00005EC0D3
Length = 245
Score = 89.7 bits (221), Expect = 1e-16
Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + ++
Sbjct: 6 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRGSRSRA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E L++ E AI+ + +P++ +D++
Sbjct: 66 LPDRALVNCQYSMATFSTGERKRRPHGDRKACEMGLQLRQTFEAAILTQLYPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G + ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 QVLQADGGNYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEE 178
[153][TOP]
>UniRef100_Q6PBZ8 Exosc4 protein n=1 Tax=Danio rerio RepID=Q6PBZ8_DANRE
Length = 245
Score = 89.7 bits (221), Expect = 1e-16
Identities = 57/174 (32%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ + R DGR + R R A GSAY E GNTK + V+GP E + + S
Sbjct: 6 LLSDQGYRLDGRKATELRKVQARMSVFAQADGSAYLEQGNTKALAVVYGPHEIRGSRSKS 65
Query: 246 --DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E S L++ E A++ E +P++ +D++
Sbjct: 66 LHDRAIINCQYSMATFSTAERKRRPHGDRKSSEMSLHLKQTFEAAVLTELYPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L++ G + ++ A+LAL DAGI M D V + S + + D EE+
Sbjct: 126 KILQADGGNYSACVNAATLALVDAGIPMRDYVCACSAGFVEDTPLADLCHAEES 179
[154][TOP]
>UniRef100_C5YZ99 Putative uncharacterized protein Sb09g022550 n=1 Tax=Sorghum
bicolor RepID=C5YZ99_SORBI
Length = 242
Score = 89.7 bits (221), Expect = 1e-16
Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 6/160 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMLYSDTGRL 260
R DGR ++ R G V A GSA E GNT+VI +V+GPRE +K + S+ +
Sbjct: 11 RVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSNEALV 70
Query: 261 NCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
C FST R + D + E S ++++ +E +I+ P++ +D++ VL++ G
Sbjct: 71 RCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQIDIYVQVLQADG 130
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
I+ A+LALADAGI M D+VTS S L ++D
Sbjct: 131 GTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLD 170
[155][TOP]
>UniRef100_Q12ZB7 Archaeal exosome complex RNA-binding protein n=1
Tax=Methanococcoides burtonii DSM 6242
RepID=Q12ZB7_METBU
Length = 343
Score = 89.4 bits (220), Expect = 2e-16
Identities = 60/179 (33%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA 233
K I E+ R DGR + RP G ++ A GS Y E+GN KV+ +V+GPRE
Sbjct: 4 KPVKFIDENGLRLDGRRVDEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVYGPRELHPR 63
Query: 234 MLYSDTGRL-NCNVSYTTFSTPVR---GQGSDHKEYSSMLQKALEGAIILESFPKTTVDV 401
L + L + FS R G E S + +A E ++ + +P +DV
Sbjct: 64 RLQRPSEALVRYRYNMAAFSVEDRIRPGPSRRSTEISKVSGEAFETVVMKQFYPGAVIDV 123
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
FA VL++ I+ A+LAL DAGI M LV + +V + L+ID E+N D
Sbjct: 124 FAEVLQADAGTRTAAINAATLALVDAGIPMKGLVAACAVGKVDGQLVIDLNKPEDNYGD 182
[156][TOP]
>UniRef100_B6JWS8 Putative uncharacterized protein n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6JWS8_SCHJY
Length = 251
Score = 88.6 bits (218), Expect = 3e-16
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 7/160 (4%)
Frame = +3
Query: 120 PAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPV 299
PA G A+G+AY E GN K+ SVFGPR +K + +S +L C + ++ F+ V
Sbjct: 12 PAVVYLGWTTKANGNAYLESGNIKIACSVFGPRPTKTSSFHS-IAKLTCELKFSPFAQTV 70
Query: 300 RG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSG--SDLPVVISVASL 464
R Q + +++S ++++L +I+L +PK+++DV+ +LES G + + I+ ASL
Sbjct: 71 RKSNVQDINERDFSQHIERSLAPSIMLHLYPKSSIDVYIQILESDGQLATIAAAITCASL 130
Query: 465 ALADAGILMYDLVTSVSV--SCLGKNLIIDPISEEENCQD 578
A+A+A I D+VT S + I+DP +E D
Sbjct: 131 AIANAKIDCIDIVTGASALYKQPSASCIVDPEESDERDAD 170
[157][TOP]
>UniRef100_A5E3M3 Exosome complex exonuclease RRP41 n=1 Tax=Lodderomyces elongisporus
RepID=A5E3M3_LODEL
Length = 244
Score = 88.6 bits (218), Expect = 3e-16
Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGRL 260
R DGR +++ R R N++ GS+Y E GNTKVI +V GP E + +A + D +
Sbjct: 13 RIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVICTVIGPMEPTSRAQMNQDRANV 72
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ FST R + S + E + L++ E I+L +P+T + + VL G
Sbjct: 73 EVNLTIANFSTFERKKRSKTEKRLVELRTTLERTFEQLILLHLYPRTNITINVQVLNQDG 132
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L V + +LAL DAGI MYD V+S+S ++ ++D + EEN
Sbjct: 133 GMLAAVTNSITLALMDAGIAMYDYVSSISCGLHDQSPLLDLNNLEEN 179
[158][TOP]
>UniRef100_UPI0001758632 PREDICTED: similar to exosome complex exonuclease RRP41, putative
n=1 Tax=Tribolium castaneum RepID=UPI0001758632
Length = 249
Score = 88.2 bits (217), Expect = 4e-16
Identities = 58/175 (33%), Positives = 89/175 (50%), Gaps = 4/175 (2%)
Frame = +3
Query: 54 KKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA 233
K ++ + R DGR + R + G GSAY E G TKV+ +V+GP + A
Sbjct: 3 KNRELLSKIGLRQDGRRADELRRIRCKLGVFTEPDGSAYLEQGLTKVLAAVYGPHQVGFA 62
Query: 234 MLYSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDV 401
D+ +NC S FST R + D K E S L++AL AI +E +P T +DV
Sbjct: 63 KAQHDSAVVNCQFSMAVFSTGERKKRPRGDRKSTEISIHLRQALTAAIKVELYPWTQIDV 122
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ VL + G P ++ A+LAL DAGI + + V + + S ++ + +S +E
Sbjct: 123 YVEVLHADGGIYPACVNAATLALIDAGIPLKEYVCACTASLANNDVPLLDVSHQE 177
[159][TOP]
>UniRef100_C5YVG7 Putative uncharacterized protein Sb09g028170 n=1 Tax=Sorghum
bicolor RepID=C5YVG7_SORBI
Length = 242
Score = 88.2 bits (217), Expect = 4e-16
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMLYSDTGRL 260
R DGR ++ R G V A GSA E GNT+VI +V+GPRE +K + S+ +
Sbjct: 11 RVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSNEALV 70
Query: 261 NCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
C FST R + D + E S ++++ +E +I+ P + +D++ VL++ G
Sbjct: 71 RCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQIDIYVQVLQADG 130
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
I+ A+LALADAGI M D+VTS S L ++D
Sbjct: 131 GTRSACINAATLALADAGIPMRDIVTSCSAGYLCSTPLLD 170
[160][TOP]
>UniRef100_C4R4E4 3'-to-5' phosphorolytic exoribonuclease that is a subunit of the
exosome n=1 Tax=Pichia pastoris GS115 RepID=C4R4E4_PICPG
Length = 246
Score = 88.2 bits (217), Expect = 4e-16
Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 5/159 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVN-AASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLN 263
R DGR +++ R + R A GSAY E GNTK++ + GP E ++ + + G L+
Sbjct: 10 RVDGRRWNELRRFYCRINTHPIVADGSAYVEAGNTKIVCLLNGPHEPTRSQMNTQKGSLD 69
Query: 264 CNVSYTTFSTPVRGQGSDH----KEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGS 431
+ + FST R + + + +E S++L+ E +IL+++P+T ++V VL G
Sbjct: 70 IKLHVSPFSTTERRKVTRNDRRIQELSTILKNTFEQVVILKNYPRTIIEVNVRVLAQDGG 129
Query: 432 DLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L + +LAL DAGI +YD +++VS +++D
Sbjct: 130 LLAACCNAITLALVDAGIALYDYISAVSAGVFDNQILLD 168
[161][TOP]
>UniRef100_UPI00017968DC PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA-processing protein 41) (Exosome component 4) (p12A)
n=1 Tax=Equus caballus RepID=UPI00017968DC
Length = 245
Score = 87.8 bits (216), Expect = 5e-16
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + +A
Sbjct: 6 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E L++ E AI+ + P++ +D++
Sbjct: 66 LPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 QVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEE 178
[162][TOP]
>UniRef100_UPI00004A57C5 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00004A57C5
Length = 245
Score = 87.8 bits (216), Expect = 5e-16
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + +A
Sbjct: 6 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E L++ E AI+ + P++ +D++
Sbjct: 66 LPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLHLRQTFEAAILTQLHPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 QVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDNTALADLSHVEE 178
[163][TOP]
>UniRef100_Q9NPD3 Exosome complex exonuclease RRP41 n=1 Tax=Homo sapiens
RepID=EXOS4_HUMAN
Length = 245
Score = 87.8 bits (216), Expect = 5e-16
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + +A
Sbjct: 6 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E L++ E AI+ + P++ +D++
Sbjct: 66 LPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 QVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEE 178
[164][TOP]
>UniRef100_Q7YRA3 Exosome complex exonuclease RRP41 n=1 Tax=Bos taurus
RepID=EXOS4_BOVIN
Length = 245
Score = 87.8 bits (216), Expect = 5e-16
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + +A
Sbjct: 6 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E L++ E AI+ + P++ +D++
Sbjct: 66 LPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 QVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEE 178
[165][TOP]
>UniRef100_Q28H58 Exosome component 4 n=1 Tax=Xenopus (Silurana) tropicalis
RepID=Q28H58_XENTR
Length = 249
Score = 87.4 bits (215), Expect = 7e-16
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE---SKKAM 236
++ + R DGR + R R G A GSAY E GNTK + V+GP E S+ M
Sbjct: 6 LLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRSKM 65
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVF 404
L+ D +NC S TFST R + D K E + L++ E AI+ + +P++ +D++
Sbjct: 66 LH-DRSVVNCQYSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTQLYPRSQIDIY 124
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+L++ G + ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 125 VQILQADGGNYCTCVNAATLAVIDAGIPMRDYVCASSAGFIEDTPLADLSYVEE 178
[166][TOP]
>UniRef100_B4ML94 GK17502 n=1 Tax=Drosophila willistoni RepID=B4ML94_DROWI
Length = 326
Score = 87.4 bits (215), Expect = 7e-16
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P E +A + G LNC V+Y F+T
Sbjct: 46 RTTFLRAGVLTTVRGSAYMEYGNTKVMAIVAPPHEVVRASARRMNMGSLNCYVNYAAFAT 105
Query: 294 -PVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ K+ SSML KALE + F +DV L++E G L I+ +AL
Sbjct: 106 GELETVPRREKQLSSMLTKALEPVVCRNEFLNFQLDVRVLIIEDDGCLLSTAINCCGVAL 165
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDP 551
+ GI YDL+T+ + ++ I+P
Sbjct: 166 VECGISTYDLITASTACIYRDHVFINP 192
[167][TOP]
>UniRef100_Q5PQ94 LOC495942 protein n=1 Tax=Xenopus laevis RepID=Q5PQ94_XENLA
Length = 249
Score = 87.0 bits (214), Expect = 9e-16
Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 7/174 (4%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE---SKKAM 236
++ + R DGR + R R G A GSAY E GNTK + V+GP E S+ M
Sbjct: 6 LLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRSKM 65
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVF 404
L+ D +NC S TFST R + D K E + L++ E AI+ + +P++ +D++
Sbjct: 66 LH-DRCVINCQYSMATFSTGERKRRPHGDRKSSEMTLHLKQTFEAAILTQLYPRSQIDIY 124
Query: 405 ALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+L++ G + ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 125 VQILQADGGNYCTCVNAATLAVIDAGIPMRDYVCACSAGFIEDTPLADLSYVEE 178
[168][TOP]
>UniRef100_B5IEX0 Exosome complex exonuclease 1 (Fragment) n=1 Tax=Aciduliprofundum
boonei T469 RepID=B5IEX0_9EURY
Length = 208
Score = 87.0 bits (214), Expect = 9e-16
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Frame = +3
Query: 153 ASGSAYAEFGNTKVIVSVFGPRES-KKAMLYSDTGRLNCNVSYTTFSTPVRGQ-GSDHK- 323
A GSA+ E+G K+I +V+GP E+ K + +D + S FS R + G D +
Sbjct: 1 ADGSAFIEWGGNKIIAAVYGPHEAYPKHVQEADRAIVRARYSMAPFSVDERKRPGPDRRA 60
Query: 324 -EYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDL 500
E S ++ +ALE I +E +P+T++DV+ VL++ I+VASLALADAGI M DL
Sbjct: 61 IELSKVISEALESVIFVEKYPRTSIDVYIEVLQADAGTRVAGITVASLALADAGIPMRDL 120
Query: 501 VTSVSVSCLGKNLIIDPISEEEN 569
+ + + +++D EE+N
Sbjct: 121 IVGCAAGKIDDVVVLDLNKEEDN 143
[169][TOP]
>UniRef100_A9TY02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TY02_PHYPA
Length = 246
Score = 86.7 bits (213), Expect = 1e-15
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 5/172 (2%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYS 245
+ + R DGR + R G V +A GSA GNT+V+ V+GP E KA
Sbjct: 6 VSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVYGPHEVHNKAHQLH 65
Query: 246 DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
D + C S FST R + +D + E S ++ + LE AI+ P++ +D++ V
Sbjct: 66 DKALVRCEYSMAAFSTGERRRRGKTDRRATELSLVIGQTLEAAIMTHLLPRSQIDIYVQV 125
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L++ G I+ AS+ALADAGI M DLV S + L ++D +E++
Sbjct: 126 LQADGGTRAACINAASMALADAGIPMRDLVVSCAAGYLNSTPLLDLNYQEDS 177
[170][TOP]
>UniRef100_B9QI93 3' exoribonuclease, putative n=1 Tax=Toxoplasma gondii VEG
RepID=B9QI93_TOXGO
Length = 303
Score = 86.7 bits (213), Expect = 1e-15
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R DGR F + R +T ++ AA+GSA+ G TK+ +V+GPR + K D G +N
Sbjct: 47 RHDGRRFEEMRAMCMQTHSLAAAAGSAFVSVGKTKLNCAVYGPRPNMKHAS-QDRGSINL 105
Query: 267 NVSYTTFSTPVRGQGS--DHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLP 440
+ F+T + S D +++L +AL + L+ + K+T+ V LVLE G +
Sbjct: 106 EFRFAPFATTGKDACSERDTAHLTTLLHQALNAVVRLDLYAKSTIAVSVLVLEDDGGLIS 165
Query: 441 VVISVASLALADAGILMYDLVTSVSVSCLGKN---------LIIDPISEE 563
++ LALADAGI M D+VT S +++DP +EE
Sbjct: 166 AALTCIGLALADAGIEMLDVVTGASACVFSVGHPDSPPRTCVLLDPDAEE 215
[171][TOP]
>UniRef100_B6KQ03 3' exoribonuclease, putative n=2 Tax=Toxoplasma gondii
RepID=B6KQ03_TOXGO
Length = 303
Score = 86.7 bits (213), Expect = 1e-15
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 11/170 (6%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R DGR F + R +T ++ AA+GSA+ G TK+ +V+GPR + K D G +N
Sbjct: 47 RHDGRRFEEMRAMCMQTHSLAAAAGSAFVSVGKTKLNCAVYGPRPNMKHAS-QDRGSINL 105
Query: 267 NVSYTTFSTPVRGQGS--DHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLP 440
+ F+T + S D +++L +AL + L+ + K+T+ V LVLE G +
Sbjct: 106 EFRFAPFATTGKDACSERDTAHLTTLLHQALNAVVRLDLYAKSTIAVSVLVLEDDGGLIS 165
Query: 441 VVISVASLALADAGILMYDLVTSVSVSCLGKN---------LIIDPISEE 563
++ LALADAGI M D+VT S +++DP +EE
Sbjct: 166 AALTCIGLALADAGIEMLDVVTGASACVFSVGHPDSPPRTCVLLDPDAEE 215
[172][TOP]
>UniRef100_UPI00001CFD4D exosome component 4 n=1 Tax=Rattus norvegicus RepID=UPI00001CFD4D
Length = 245
Score = 86.3 bits (212), Expect = 2e-15
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + ++
Sbjct: 6 LLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRSRA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E L++ E AI+ + P++ +D++
Sbjct: 66 LPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 QVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEE 178
[173][TOP]
>UniRef100_B4FDA8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FDA8_MAIZE
Length = 242
Score = 86.3 bits (212), Expect = 2e-15
Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 6/160 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMLYSDTGRL 260
R DGR ++ R G V A GSA E GNT+VI +V+GPRE +K + S +
Sbjct: 11 RVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSKEALV 70
Query: 261 NCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
C FST R + D + E S ++++ +E +I+ P + +D++ VL++ G
Sbjct: 71 RCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQIDIYVQVLQADG 130
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
I+ A+LALADAGI M D+ TS S L ++D
Sbjct: 131 GTRSACINAATLALADAGIPMRDIATSCSAGYLCSTPLLD 170
[174][TOP]
>UniRef100_A8PXC4 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS
7966 RepID=A8PXC4_MALGO
Length = 253
Score = 86.3 bits (212), Expect = 2e-15
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
Frame = +3
Query: 39 PTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPR 218
P +K P + RPDGR + RP + +TG + +ASGS E G+TK++ SV GPR
Sbjct: 11 PCIAQKSPVV------RPDGRKAEEPRPLYLQTGIIPSASGSTLLESGHTKIVCSVHGPR 64
Query: 219 ESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSDHKE--YSSMLQKALEGAIILESFPKTT 392
+ + Y+ +N FS R D + ++++Q+AL AI L+ PK++
Sbjct: 65 Q-VRGRHYAGKAEVNVQFEMAPFSEKERRSSRDTEAPVPAALIQQALLPAIRLDLLPKSS 123
Query: 393 VDVFALVLESSGSDL---PVVISVASLALADAGILMYDLVTSVSVSCL 527
+DV VL+S S L + + AS ALA+AG+ M LVT + + +
Sbjct: 124 IDVHITVLDSDTSMLGCAAMGATAASAALAEAGVQMLGLVTGATATAI 171
[175][TOP]
>UniRef100_Q921I9 Exosome complex exonuclease RRP41 n=2 Tax=Mus musculus
RepID=EXOS4_MOUSE
Length = 245
Score = 86.3 bits (212), Expect = 2e-15
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK--KAML 239
++ + R DGR + R R G A GSAY E GNTK + V+GP E + ++
Sbjct: 6 LLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRSRA 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFA 407
D +NC S TFST R + D K E L++ E AI+ + P++ +D++
Sbjct: 66 LPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQIDIYV 125
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 QVLQADGGTYAACVNAATLAVMDAGIPMRDFVCACSAGFVDGTALADLSHVEE 178
[176][TOP]
>UniRef100_B6T763 Exosome complex exonuclease RRP41 n=1 Tax=Zea mays
RepID=B6T763_MAIZE
Length = 242
Score = 85.9 bits (211), Expect = 2e-15
Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 6/160 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMLYSDTGRL 260
R DGR ++ R G V A GSA E GNT+VI +V+GPRE +K + S +
Sbjct: 11 RVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSKEALV 70
Query: 261 NCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
C FST R + D + E S ++++ +E +I+ P + +D++ VL++ G
Sbjct: 71 RCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQIDIYVQVLQADG 130
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
I+ A+LALADAGI M D+ TS S L ++D
Sbjct: 131 GTRSACINAATLALADAGIPMRDIATSCSAGYLCSTPLLD 170
[177][TOP]
>UniRef100_UPI00005A29C7 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 4 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C7
Length = 244
Score = 85.5 bits (210), Expect = 3e-15
Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ + R DGR + R R G A GSAY E GNTK + V+GP E++ +
Sbjct: 6 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEARGVRTLT 65
Query: 246 DTGRL-NCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFAL 410
L NC S TFST R + D K E L++ E AI+ + P++ +D++
Sbjct: 66 QRKALVNCQYSSATFSTGERKRRPHGDRKSCEMGLHLRQTFEAAILTQLHPRSQIDIYVQ 125
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
VL++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 126 VLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDNTALADLSHVEE 177
[178][TOP]
>UniRef100_Q6CRE8 KLLA0D09625p n=1 Tax=Kluyveromyces lactis RepID=Q6CRE8_KLULA
Length = 245
Score = 85.1 bits (209), Expect = 4e-15
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKKAML 239
I + R DGR +++ R NAA GS+Y E GN K+I V GP+E S ++ +
Sbjct: 6 IYSPEGLRVDGRRWNELRSFNCSINTHPNAADGSSYLEQGNNKIITLVAGPQEPSSRSQV 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTVDV 401
+ L+ ++ T F+ R + S HK E+ + L + E ++L +P+T++DV
Sbjct: 66 NTKQATLSVTINLTKFAKMERSKSS-HKNERRTLEWQASLVRTFEKNLMLHLYPRTSIDV 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L+ G L +++ +LAL DAGI MYD V+ VSV ++D S EEN
Sbjct: 125 QVHALQLDGGILGAMLNGITLALIDAGIAMYDFVSGVSVGLYDTTPLLDLNSLEEN 180
[179][TOP]
>UniRef100_Q01B24 Ribonuclease PH (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01B24_OSTTA
Length = 693
Score = 84.7 bits (208), Expect = 5e-15
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 16/175 (9%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNA-ASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLN 263
R DGR + A N+ ASGS+Y E GNTKV +V+GPR + L +TG ++
Sbjct: 461 RSDGRASDEHLRALSVALDTNSRASGSSYVELGNTKVSCAVYGPRRPRVDDLTVNTGVID 520
Query: 264 CNVSYTTFSTP-----VRGQGSDHK----------EYSSMLQKALEGAIILESFPKTTVD 398
+V F+ RG+ ++ + E S+ + L + E+FP+ VD
Sbjct: 521 VDVFRVPFARKRAIHVERGRENEREKDLNRSAADVELSARIADVLRACALTETFPRAQVD 580
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEE 563
V+ +++S G ++ + AS ALA AG+ M DL ++ + +G+ L++DP EE
Sbjct: 581 VYVTIMDSDGGEVVASVLAASAALARAGVEMADLASACELVRIGERLVLDPTEEE 635
[180][TOP]
>UniRef100_Q2LYV6 GA20773 n=1 Tax=Drosophila pseudoobscura pseudoobscura
RepID=Q2LYV6_DROPS
Length = 328
Score = 84.7 bits (208), Expect = 5e-15
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST-PVRG 305
R G + GSAY E+GNTKV+ V P E +A + G +NC V++ F+T +
Sbjct: 50 RAGVLTTVRGSAYMEYGNTKVMAIVAPPHEMMRATARRMNMGVINCFVNFAAFATGELES 109
Query: 306 QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGI 485
K SML KALE + F +D+ L+L+ G L I+ +AL + GI
Sbjct: 110 VPEREKHLGSMLSKALEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVALVECGI 169
Query: 486 LMYDLVTSVSVSCLGKNLIIDPISEEE 566
YDLVT+ + N+ ++P ++EE
Sbjct: 170 STYDLVTASTACIYRDNVFLNPTAKEE 196
[181][TOP]
>UniRef100_B4IIS3 GM15571 n=1 Tax=Drosophila sechellia RepID=B4IIS3_DROSE
Length = 327
Score = 84.3 bits (207), Expect = 6e-15
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P+E +A + G LNC V++ F T
Sbjct: 48 RNTFIRAGVLTTVRGSAYMEYGNTKVLTIVAPPKELIRASARRMNMGVLNCYVNFAAFGT 107
Query: 294 PVRGQGSDHKEY-SSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ + Y SSML KALE + F +D+ L+L+ G L I+ +AL
Sbjct: 108 GDLDSVPERERYLSSMLTKALEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 167
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ GI YDL+T+ + ++ ++P ++ E
Sbjct: 168 VECGISTYDLITASTACIYRDHVFLNPSAKIE 199
[182][TOP]
>UniRef100_B4H034 GL22907 n=1 Tax=Drosophila persimilis RepID=B4H034_DROPE
Length = 328
Score = 84.3 bits (207), Expect = 6e-15
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 2/147 (1%)
Frame = +3
Query: 132 RTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST-PVRG 305
R G + GSAY E+GNTKV+ V P E +A + G +NC V++ F+T +
Sbjct: 50 RAGVLTTVRGSAYMEYGNTKVMAIVAPPHELMRATARRMNMGVINCFVNFAAFATGELES 109
Query: 306 QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGI 485
K SML KALE + F +D+ L+L+ G L I+ +AL + GI
Sbjct: 110 VPEREKHLGSMLSKALEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVALVECGI 169
Query: 486 LMYDLVTSVSVSCLGKNLIIDPISEEE 566
YDLVT+ + N+ ++P ++EE
Sbjct: 170 STYDLVTASTACIYRDNVFLNPTAKEE 196
[183][TOP]
>UniRef100_B3M8T3 GF10840 n=1 Tax=Drosophila ananassae RepID=B3M8T3_DROAN
Length = 325
Score = 84.3 bits (207), Expect = 6e-15
Identities = 52/153 (33%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P E +A + G +NC V++ F+T
Sbjct: 48 RKTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPHELMRASARRMNMGVINCYVNFAAFAT 107
Query: 294 -PVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ + SML KALE + F +D+ L+L+ G L I+ +AL
Sbjct: 108 GELESVPERERHLGSMLTKALEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 167
Query: 471 ADAGILMYDLVTSVSVSCLGKN-LIIDPISEEE 566
+ GI YDL+T+ S +C+ +N + ++P S+ E
Sbjct: 168 VECGISTYDLITA-STACIYRNHVFLNPSSKVE 199
[184][TOP]
>UniRef100_Q6CA11 YALI0D06776p n=1 Tax=Yarrowia lipolytica RepID=Q6CA11_YARLI
Length = 287
Score = 84.3 bits (207), Expect = 6e-15
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 5/182 (2%)
Frame = +3
Query: 36 SPTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFG 212
SP T + + I + R DGR +++ R + +A GS+Y E+G+TKV+ +V G
Sbjct: 43 SPLT-QSRHEIYSPEGLRTDGRRWNEIRNFDCKINTHPTSADGSSYVEWGHTKVVCTVDG 101
Query: 213 PRESKKAMLYSDTGRLNCNVSYTTFSTPVR--GQGSDHK--EYSSMLQKALEGAIILESF 380
PRE +D ++ NV+ +FST R Q +D + E + ++++ LE A++ +
Sbjct: 102 PREPDNRQNTTDRAVISVNVNVASFSTETRIKRQRNDKRLAEMNILIRQLLEEAVLTKLN 161
Query: 381 PKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISE 560
P+T + V V+ G LP I+ A LA+ DAG+ + D V++ S N +ID +
Sbjct: 162 PRTQIAVNITVIAQDGGLLPACINAACLAMIDAGVPLTDYVSACSSGVYSNNALIDLNTL 221
Query: 561 EE 566
EE
Sbjct: 222 EE 223
[185][TOP]
>UniRef100_Q6K293 Putative exosome component 4 n=1 Tax=Oryza sativa Japonica Group
RepID=Q6K293_ORYSJ
Length = 245
Score = 84.0 bits (206), Expect = 8e-15
Identities = 62/168 (36%), Positives = 86/168 (51%), Gaps = 25/168 (14%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-------------SK 227
R DGR ++ R G V A GSA E GNT+VI +V+GPRE SK
Sbjct: 11 RVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVAAHPDYWLVRLISK 70
Query: 228 KAMLYSDTGRLNCNVSYTT--------FSTPVRGQG--SDHK--EYSSMLQKALEGAIIL 371
KA GR VS +T FST R + D + E S ++++ +E +I+
Sbjct: 71 KAKREGLRGRSRTKVSKSTAKMLWMADFSTGDRRRKPKGDRRSTEISLVIRQTMEASILT 130
Query: 372 ESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVS 515
P++ +D+F VL++ G I+ A+LALADAGI M D+VTS S
Sbjct: 131 HLMPRSQIDIFVQVLQADGGTRAACINAATLALADAGIPMRDIVTSCS 178
[186][TOP]
>UniRef100_C4YA81 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4YA81_CLAL4
Length = 244
Score = 84.0 bits (206), Expect = 8e-15
Identities = 54/167 (32%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGRL 260
R DGR +++ R + N+A GS+Y E GNTKV+ V GP+E S ++ + +
Sbjct: 13 RVDGRRWNELRRFECKINTHANSADGSSYIEQGNTKVMCMVHGPKEPSLRSQSNQNRATI 72
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ +FST R + + + E + L++ E +I+ +P+T ++V VL G
Sbjct: 73 EINLNVASFSTLERKKRNRTEKRMVELKTTLERTFEQSILAHLYPRTLIEVHVQVLAQDG 132
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L + + +LAL DAGI MYD V++V+V+ + ++D + EEN
Sbjct: 133 GMLASITNAITLALVDAGIAMYDYVSAVNVALHDQTPLLDLNTLEEN 179
[187][TOP]
>UniRef100_UPI00015B5B6C PREDICTED: similar to ENSANGP00000009222 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5B6C
Length = 270
Score = 83.6 bits (205), Expect = 1e-14
Identities = 62/167 (37%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KA---MLYSDTG 254
R DGR + R R G A GSAY E G TK++ +V+GP + + KA L + G
Sbjct: 13 RADGRRPLELRRIRLRMGVFGQADGSAYLEQGKTKILATVYGPHQPRGKANANALKAVKG 72
Query: 255 RLNCNVSYTTFSTPVRGQGSDHK---------EYSSMLQKALEGAIILESFPKTTVDVFA 407
+NC S FS G G K E S L+ A+E I LE F ++ +D+F
Sbjct: 73 IVNCQYSTAVFSF---GAGERKKKPRGDRKSQERSQQLRHAMEAIINLELFARSQIDIFV 129
Query: 408 LVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
VL+ GSD V ++ A+LAL DAGI + D SV+ + NL+ D
Sbjct: 130 EVLQVDGSDFCVAVNAATLALIDAGIPIKDYAIGCSVT-VSDNLLGD 175
[188][TOP]
>UniRef100_UPI00005A29C8 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C8
Length = 238
Score = 83.6 bits (205), Expect = 1e-14
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
++ + R DGR + R R G A GSAY E GNTK + V+GP E+
Sbjct: 6 LLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEAS-----G 60
Query: 246 DTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+NC S TFST R + D K E L++ E AI+ + P++ +D++ V
Sbjct: 61 HRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLHLRQTFEAAILTQLHPRSQIDIYVQV 120
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
L++ G ++ A+LA+ DAGI M D V + S + + D EE
Sbjct: 121 LQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDNTALADLSHVEE 171
[189][TOP]
>UniRef100_Q9VW53 Mtr3 n=2 Tax=Drosophila melanogaster RepID=Q9VW53_DROME
Length = 326
Score = 83.6 bits (205), Expect = 1e-14
Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P+E +A + G LNC V++ FST
Sbjct: 48 RNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYVNFAAFST 107
Query: 294 PVRGQGSDHKEY-SSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ + + SSML KA+E + F +D+ L+L+ G L I+ +AL
Sbjct: 108 GDLDSVPERERHLSSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 167
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ GI YDL+T+ + ++ ++P ++ E
Sbjct: 168 VECGISTYDLITASTACIYRDHVFLNPSAKVE 199
[190][TOP]
>UniRef100_B3LI42 Exosome complex exonuclease RRP41 n=1 Tax=Saccharomyces cerevisiae
RM11-1a RepID=B3LI42_YEAS1
Length = 246
Score = 83.6 bits (205), Expect = 1e-14
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRESK-KAML 239
I + R DGR +++ R +AA GS+Y E GN K+I V GP+E + K+ +
Sbjct: 6 IYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPRLKSQM 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTVDV 401
+ LN +V+ T FS R + S HK E + L + E ++L +P+T +D+
Sbjct: 66 DTSKALLNVSVNITKFSKFERSKSS-HKNERRVLEIQTSLVRMFEKNVMLNIYPRTVIDI 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
VLE G + +I+ +LAL DAGI M+D ++ +SV ++D S EEN
Sbjct: 125 EIHVLEQDGGIMGSLINGITLALIDAGISMFDYISGISVGLYDTTPLLDTNSLEEN 180
[191][TOP]
>UniRef100_P46948 Exosome complex component SKI6 n=5 Tax=Saccharomyces cerevisiae
RepID=RRP41_YEAST
Length = 246
Score = 83.6 bits (205), Expect = 1e-14
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRESK-KAML 239
I + R DGR +++ R +AA GS+Y E GN K+I V GP+E + K+ +
Sbjct: 6 IYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPRLKSQM 65
Query: 240 YSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTVDV 401
+ LN +V+ T FS R + S HK E + L + E ++L +P+T +D+
Sbjct: 66 DTSKALLNVSVNITKFSKFERSKSS-HKNERRVLEIQTSLVRMFEKNVMLNIYPRTVIDI 124
Query: 402 FALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
VLE G + +I+ +LAL DAGI M+D ++ +SV ++D S EEN
Sbjct: 125 EIHVLEQDGGIMGSLINGITLALIDAGISMFDYISGISVGLYDTTPLLDTNSLEEN 180
[192][TOP]
>UniRef100_B4QRC9 GD12240 n=1 Tax=Drosophila simulans RepID=B4QRC9_DROSI
Length = 327
Score = 83.2 bits (204), Expect = 1e-14
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P+E +A + G LNC V++ F T
Sbjct: 48 RNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYVNFAAFGT 107
Query: 294 -PVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ + SSML KALE + F +D+ L+L+ G L I+ +AL
Sbjct: 108 GDLESVPERERHLSSMLTKALEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 167
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ GI YDL+T+ + ++ ++P ++ E
Sbjct: 168 VECGISTYDLITASTACIYRDHVFLNPSAKIE 199
[193][TOP]
>UniRef100_B4L0W3 GI13661 n=1 Tax=Drosophila mojavensis RepID=B4L0W3_DROMO
Length = 329
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTK++ V PRE ++ + G +NC V++ F+T
Sbjct: 46 RSTFIRAGVLTTVRGSAYMEYGNTKLMAIVAPPRELVRSSAHRVSMGVINCYVNFAAFAT 105
Query: 294 -PVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ K SML KALE + F +D+ L+L+ G L I+ +AL
Sbjct: 106 GDLESVPEREKHLGSMLTKALEPLVCRNEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 165
Query: 471 ADAGILMYDLVTSVSVSCLGKNLI-IDPISEEE 566
+ GI YDL+T+ S +C+ + + I+P ++ E
Sbjct: 166 IECGISTYDLITA-STACIYRGYVFINPTAKVE 197
[194][TOP]
>UniRef100_Q5AMR4 Likely exosome component Ski6p n=1 Tax=Candida albicans
RepID=Q5AMR4_CANAL
Length = 240
Score = 82.8 bits (203), Expect = 2e-14
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGRL 260
R DGR +++ R R N++ GS+Y E GNTKV+ +V GP E + ++ +S+ +
Sbjct: 10 RIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRSQQHSERANI 69
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ +FST R + S ++ E + L+K E ++++ +P+T + + VL G
Sbjct: 70 EVNLNIASFSTFERKKRSRNERRLVELKTTLEKTFEESVMINLYPRTNIVINVQVLCQDG 129
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L VI+ +LAL DAGI MYD V+ VS + ++D + EE+
Sbjct: 130 GMLAAVINSITLALIDAGISMYDYVSGVSCGLYDQTPLLDVNNLEEH 176
[195][TOP]
>UniRef100_C4YHN7 Exosome complex exonuclease RRP41 n=1 Tax=Candida albicans
RepID=C4YHN7_CANAL
Length = 240
Score = 82.8 bits (203), Expect = 2e-14
Identities = 55/167 (32%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGRL 260
R DGR +++ R R N++ GS+Y E GNTKV+ +V GP E + ++ +S+ +
Sbjct: 10 RIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRSQQHSERANI 69
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ +FST R + S ++ E + L+K E ++++ +P+T + + VL G
Sbjct: 70 EVNLNIASFSTFERKKRSRNERRLVELKTTLEKTFEESVMINLYPRTNIVINVQVLCQDG 129
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L VI+ +LAL DAGI MYD V+ VS + ++D + EE+
Sbjct: 130 GMLAAVINSITLALIDAGISMYDYVSGVSCGVYDQTPLLDVNNLEEH 176
[196][TOP]
>UniRef100_A8J275 3'-5' exoribonuclease PH component of the exosome n=1
Tax=Chlamydomonas reinhardtii RepID=A8J275_CHLRE
Length = 245
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYS 245
+ + R DGR + R + ++ A GSA E GNTKV+ +VFGP ++++ L
Sbjct: 4 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 63
Query: 246 DTGRLNCNVSYTTFSTPVR---GQGSDHK-EYSSMLQKALEGAIILESFPKTTVDVFALV 413
+ + C S FST R G+G E S +++ LE A+I E P++ +DV+ V
Sbjct: 64 EGALVVCEYSMAAFSTGERRRRGKGDRRSTELSMVIRNTLEQAVITELLPRSQIDVYVQV 123
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
L++ G I+ A LALA AG+ + DLV + L ++D
Sbjct: 124 LQADGGTRCAAINAAVLALAAAGVPLRDLVAGCAAGYLDGTALLD 168
[197][TOP]
>UniRef100_Q0V679 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V679_PHANO
Length = 251
Score = 82.4 bits (202), Expect = 2e-14
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTG---R 257
R DGR +++ R + AA GS+Y E GNTK++VSV GP E K+A G +
Sbjct: 14 RLDGRRWNELRRIHAQISTQAAADGSSYLEMGNTKILVSVTGPAEGKQAGQRGGNGGQAK 73
Query: 258 LNCNVSYTTFSTPVR----GQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
+ +++ FS R G KE ++ A EG ++L +P +T+ + ++
Sbjct: 74 VEVEINFAGFSGMERRRRGGGDKRSKEMEHCVRSAFEGVLLLHLYPHSTITLNIHIISQD 133
Query: 426 GSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
GS L I+ ++LAL DAGI M D + + + + + D S E+ D
Sbjct: 134 GSLLAACINASTLALIDAGIPMTDYLVACTAASSASSSAADNASAEDPLLD 184
[198][TOP]
>UniRef100_B9WFQ9 Exosome complex exonuclease, putative (Ribosomal rna processing
protein, putative) (3'-to-5' phosphorolytic
exoribonuclease, putative) n=1 Tax=Candida dubliniensis
CD36 RepID=B9WFQ9_CANDC
Length = 240
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGRL 260
R DGR +++ R R N++ GS+Y E GNTKV+ +V GP E + ++ +S+ +
Sbjct: 10 RIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPTLRSQQHSERANI 69
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ +FST R + S ++ E + L+K E ++++ +P+T + + VL G
Sbjct: 70 EVNLNIASFSTFERKKRSRNERRLVELKTTLEKTFEESVMINLYPRTNIVINVQVLCQDG 129
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L +I+ +LAL DAGI MYD V+ VS + ++D + EE+
Sbjct: 130 GMLATIINSITLALIDAGISMYDYVSGVSCGLYDQTPLLDVNNLEEH 176
[199][TOP]
>UniRef100_C1BN11 Exosome complex exonuclease RRP41 n=1 Tax=Caligus rogercresseyi
RepID=C1BN11_9MAXI
Length = 246
Score = 82.0 bits (201), Expect = 3e-14
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 9/177 (5%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVN-AASGSAYAEFGNTKVIVSVFGPRESKKAMLY 242
++ + R DGR + R R GA + +A GSAY E GNTKV+ +V+GPRE +
Sbjct: 3 LLSDQGLRLDGRKSDELRRLRCRLGAFSWSADGSAYLEMGNTKVLAAVYGPREPRGGSSG 62
Query: 243 SDTGR----LNCNVSYTTFSTPVRGQGS--DHK--EYSSMLQKALEGAIILESFPKTTVD 398
++ + LN S FST R Q D + E ++ L++ I E +P++ +D
Sbjct: 63 DNSNKEEAILNVQFSSAAFSTAERKQRQRGDKRSLEMAAHLKQTFAACIQTELYPRSQID 122
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+F VL++ G ++ A+LAL AGI + D V + S S + + ++D E N
Sbjct: 123 IFVEVLQTDGGHYCASVNAATLALIHAGIPLRDYVCACSASLIKETPLLDISMLESN 179
[200][TOP]
>UniRef100_B4PFW4 GE22455 n=1 Tax=Drosophila yakuba RepID=B4PFW4_DROYA
Length = 328
Score = 81.6 bits (200), Expect = 4e-14
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P+E +A + G LNC V++ F+T
Sbjct: 48 RNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYVNFAAFAT 107
Query: 294 PVRGQGSDHKEY-SSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ + + SML KA+E + F +D+ L+L+ G L I+ +AL
Sbjct: 108 GDLDSVPERERHLGSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 167
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ GI YDL+T+ + ++ I+P ++ E
Sbjct: 168 VECGISTYDLITASTACIYRDHVFINPSAKVE 199
[201][TOP]
>UniRef100_B4IT94 GE23007 n=1 Tax=Drosophila yakuba RepID=B4IT94_DROYA
Length = 328
Score = 81.6 bits (200), Expect = 4e-14
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P+E +A + G LNC V++ F+T
Sbjct: 48 RNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELIRASARRMNMGVLNCYVNFAAFAT 107
Query: 294 PVRGQGSDHKEY-SSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ + + SML KA+E + F +D+ L+L+ G L I+ +AL
Sbjct: 108 GDLDSVPERERHLGSMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 167
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ GI YDL+T+ + ++ I+P ++ E
Sbjct: 168 VECGISTYDLITASTACIYRDHVFINPSAKVE 199
[202][TOP]
>UniRef100_Q6FSM7 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida
glabrata RepID=Q6FSM7_CANGA
Length = 246
Score = 81.6 bits (200), Expect = 4e-14
Identities = 62/179 (34%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVN----AASGSAYAEFGNTKVIVSVFGPRE-SKK 230
I + R DGR +++ R A+N AA GS+Y E GN KVI V GP+E + K
Sbjct: 6 IYSPEGLRLDGRRWNELRRF---ESAINTHPHAADGSSYLEQGNNKVITLVKGPKEPTLK 62
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTT 392
+ + L V+ T FS R + S HK E + L + E ++L +P+T
Sbjct: 63 SQMDIQKAILKVTVNITKFSKFERSKSS-HKNERRVLEMQTALVRTFEKNVMLHVYPRTL 121
Query: 393 VDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+D+ VL+ G + +++ SLAL DAGI MYD V+ +SV ++D S EEN
Sbjct: 122 IDIEIHVLQQDGGIMGTLLNGISLALIDAGIAMYDYVSGISVGLYDTTPLLDINSLEEN 180
[203][TOP]
>UniRef100_B4LBL6 GJ13996 n=1 Tax=Drosophila virilis RepID=B4LBL6_DROVI
Length = 329
Score = 81.3 bits (199), Expect = 5e-14
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V PRE ++ + G +NC V++ F++
Sbjct: 46 RSTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPRELVRSSARRVNMGVINCYVNFAAFAS 105
Query: 294 -PVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
+ K SML KALE + F +D+ L+L+ G L I+ +AL
Sbjct: 106 GELESVPEREKHLGSMLTKALEPLVCRNEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 165
Query: 471 ADAGILMYDLVTSVSVSCLGKNLI-IDPISEEE 566
+ GI YDL+T+ S +C+ + + ++P ++ E
Sbjct: 166 IECGISTYDLITA-STACIYRGYVFVNPSAKVE 197
[204][TOP]
>UniRef100_B0XFX8 mRNA transport regulator 3 n=1 Tax=Culex quinquefasciatus
RepID=B0XFX8_CULQU
Length = 173
Score = 81.3 bits (199), Expect = 5e-14
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Frame = +3
Query: 39 PTTGKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPR 218
PTTG +K R + R F + G V+ A GSAY E GNTKVIVSVF PR
Sbjct: 38 PTTGNRKC-----------NRQDTESRKYFMKLGVVSTAKGSAYLELGNTKVIVSVFDPR 86
Query: 219 ESKKAMLYSDTGRLNCNVSYTTFSTPVRGQ---GSDHKEYSSMLQKALEGAIILESFPKT 389
E K + + G L C++ ++ F+ R ++ + ++ + KAL+ + FP
Sbjct: 87 EIPKQNTFRELGELYCDLKFSPFACVHRKNPQTDAEERSLAAAMTKALQPVVCRHLFPNF 146
Query: 390 TVDVFALVLESSGSDL 437
+D+FA VLE GS L
Sbjct: 147 QIDIFANVLEDDGSCL 162
[205][TOP]
>UniRef100_B3T6G7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine microorganism HF4000_APKG2H5 RepID=B3T6G7_9ZZZZ
Length = 238
Score = 80.9 bits (198), Expect = 7e-14
Identities = 57/172 (33%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLY 242
+I E+ R DGR RP G V A+GSA +G VI +V+GP E+ + +
Sbjct: 9 MIDENGRRMDGRKPADLRPISIEVGVVPVAAGSACVRWGTNHVIAAVYGPMEAHPRKISR 68
Query: 243 SDTGRLNCNVSYTTFSTPVR---GQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALV 413
D L+ + FST R G +E S + ALE ++LE +P++ + V +
Sbjct: 69 QDRAVLDVRYNMAPFSTTDRIRPGFNRRSREISKVTSDALESVVLLEMYPRSKIRVEIEI 128
Query: 414 LESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L + V ++ AS+ALA AGI M D+V SV+ + +I D EE+N
Sbjct: 129 LCAEAGTRCVGLTAASVALAHAGIPMTDMVVSVASGKINGVVICDLNKEEDN 180
[206][TOP]
>UniRef100_A7TII5 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TII5_VANPO
Length = 246
Score = 80.9 bits (198), Expect = 7e-14
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Frame = +3
Query: 87 RPDGRGFHQCR--PAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLYSDTGR 257
R DGR +++ R T A +A+ GS+Y E GN K++ V GP+E ++ L +
Sbjct: 13 RLDGRRWNELRRFECSINTHA-HASDGSSYLEQGNNKIVTLVKGPQEPILRSQLDATKAS 71
Query: 258 LNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTVDVFALVLE 419
LN V+ T FS R + S HK E + L + E ++L +P+T +D+ VL+
Sbjct: 72 LNITVNITKFSKMERSKSS-HKNERRVLEMQTALVRTFEKNVMLHLYPRTLIDIEIHVLQ 130
Query: 420 SSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
G L +I+ +LAL D+GI MYD V+++S+ ++D + EEN
Sbjct: 131 QDGGILGSLINSITLALIDSGIAMYDYVSAISIGLYDTTPLLDVNTLEEN 180
[207][TOP]
>UniRef100_UPI0000DB6F09 PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Apis mellifera RepID=UPI0000DB6F09
Length = 268
Score = 80.5 bits (197), Expect = 9e-14
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT----G 254
R DGR + R + G A GSAY E GNTK++V+V+GP + + + S + G
Sbjct: 14 RLDGRRALELRQIRIKMGVFGQADGSAYIEHGNTKILVTVYGPHQPRNSTGRSTSKITKG 73
Query: 255 RLNCNVSYTTFSTPV----RGQGSDHK--EYSSMLQKALEGAIILESFPKTTVDVFALVL 416
+NC S FS R D K E S L+ A+E I LE +P++ +D++ L
Sbjct: 74 IVNCQYSMAVFSLSSGERKRKPRGDRKSQERSLQLKHAMEAIIHLELYPRSQIDIYVEAL 133
Query: 417 ESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+ GS+ ++ A+LAL DAGI + + +V+ LI P E+E+
Sbjct: 134 QVDGSEYCASVNAATLALIDAGIPIKNYAIGCTVT-----LINCPSLEDED 179
[208][TOP]
>UniRef100_B3NE04 GG13362 n=1 Tax=Drosophila erecta RepID=B3NE04_DROER
Length = 319
Score = 80.5 bits (197), Expect = 9e-14
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS-DTGRLNCNVSYTTFST 293
R F R G + GSAY E+GNTKV+ V P+E +A + G LNC V++ F++
Sbjct: 48 RNTFIRAGVLTTVRGSAYMEYGNTKVLAIVAPPKELLRASARRMNMGVLNCYVNFAAFAS 107
Query: 294 PVRGQGSDHKEY-SSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLAL 470
++ + + S ML KA+E + F +D+ L+L+ G L I+ +AL
Sbjct: 108 GDLDSVTERERHLSGMLTKAMEPVVCRTEFLNFQLDIRVLILDDDGCLLSTAINCCGVAL 167
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+ GI YDLVT+ + ++ ++P ++ E
Sbjct: 168 VECGISTYDLVTASTACIYRDHVFLNPSAKIE 199
[209][TOP]
>UniRef100_C5DCB7 KLTH0B01738p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DCB7_LACTC
Length = 245
Score = 80.1 bits (196), Expect = 1e-13
Identities = 58/177 (32%), Positives = 92/177 (51%), Gaps = 9/177 (5%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCR--PAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAM 236
I + R DGR +++ R T A NA+ GS+Y E GN KVI V GP+E K ++
Sbjct: 6 IYSPEGLRVDGRRWNELRRLECSINTHA-NASDGSSYLEQGNNKVITLVTGPQEPKLRSQ 64
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTVD 398
+ ++ ++ T FS R + S HK E + L + E ++L +P+T ++
Sbjct: 65 MNVTKATISVALNITRFSKIERSKSS-HKNERRVLEMQTALVRTFEKNVMLHLYPRTQIE 123
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+ VL+ G + +I+ +LAL DAGI MYD ++ VS+ ++D S EEN
Sbjct: 124 IQIHVLQQDGGLMSSLINGITLALIDAGIAMYDYISGVSIGLYDTTPLLDLNSVEEN 180
[210][TOP]
>UniRef100_A5DGL1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DGL1_PICGU
Length = 242
Score = 79.7 bits (195), Expect = 1e-13
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRL 260
R DGR +++ R + N+++GS+Y E GNTKVI V GP E + ++ + +
Sbjct: 13 RVDGRRWNELRRFECKINTHPNSSTGSSYVEQGNTKVICMVEGPSEPETRSQVDVSRATI 72
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ +FST R + ++ E + +++ E ++I + +P+T + V VL G
Sbjct: 73 EVNIAVASFSTIERKKRLKNEKRIIELKATMERTFEQSVICKLYPRTVIKVNLHVLAQDG 132
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L +I+ +LAL DAGI MYD V +V+ + ++D + EEN
Sbjct: 133 GMLATMINATTLALIDAGIAMYDYVAAVAAGLHNETPLLDLNTLEEN 179
[211][TOP]
>UniRef100_B6K3J3 Exosome complex exonuclease RRP41 n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6K3J3_SCHJY
Length = 243
Score = 79.0 bits (193), Expect = 3e-13
Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLY 242
+I + R DGR +++ R R G A GS++ + GNT+V+ +V GP E K
Sbjct: 7 VISAEGLRQDGRRWNEMREFDCRIGVEKTAHGSSFIQHGNTRVLCNVNGPSEPYIKGKSK 66
Query: 243 SDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFAL 410
+ +N +++ FS R + SD + E +Q+ E AI +E +PK+ + +
Sbjct: 67 QEKAFINVELNFAPFSLIDRKKRHRSDKRIQEQCVAIQRTFEQAIQVELYPKSQISISLN 126
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
VLE G + I+ A+LAL DAGI M D V + +++D + EE+
Sbjct: 127 VLEDDGGAIATCINAATLALIDAGIAMVDYVCCATAGIYETQVLLDLNTNEES 179
[212][TOP]
>UniRef100_UPI000151B3FA hypothetical protein PGUG_02412 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B3FA
Length = 242
Score = 78.6 bits (192), Expect = 3e-13
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRL 260
R DGR +++ R + N+ +GS+Y E GNTKVI V GP E + ++ + +
Sbjct: 13 RVDGRRWNELRRFECKINTHPNSLTGSSYVEQGNTKVICMVEGPLEPETRSQVDVSRATI 72
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ +FST R + ++ E + +++ E ++I + +P+T + V VL G
Sbjct: 73 EVNIAVASFSTIERKKRLKNEKRIIELKATMERTFEQSVICKLYPRTVIKVNLHVLAQDG 132
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L +I+ +LAL DAGI MYD V +V+ + ++D + EEN
Sbjct: 133 GMLATMINATTLALIDAGIAMYDYVAAVAAGLHNETPLLDLNTLEEN 179
[213][TOP]
>UniRef100_C3ZZA1 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3ZZA1_BRAFL
Length = 153
Score = 78.6 bits (192), Expect = 3e-13
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +3
Query: 138 GAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRG---Q 308
G V+ A+GSAY E G TKVI +V+GPRE + ++ GRL C + + TF+ R Q
Sbjct: 15 GVVSQATGSAYIEMGQTKVIAAVYGPREIARREEFTMKGRLCCELKFATFACRRRRQHIQ 74
Query: 309 GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGS 431
+ K+ + ++ +ALE A+ L+ FPK+ VDV+ VL+ GS
Sbjct: 75 DNQEKDGALIVLQALEPAVCLDRFPKSQVDVYITVLQDDGS 115
[214][TOP]
>UniRef100_B4IXN7 GH16904 n=1 Tax=Drosophila grimshawi RepID=B4IXN7_DROGR
Length = 331
Score = 78.6 bits (192), Expect = 3e-13
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Frame = +3
Query: 117 RPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGR-----LNCNVSYT 281
R F R G + GSAY E+GNTK++ V PRE ++ S GR LNC V++
Sbjct: 46 RSTFIRAGVLTTVRGSAYMEYGNTKMMAIVAPPRE----LVRSSAGRVNMGVLNCYVNFA 101
Query: 282 TFST-PVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVA 458
F++ + K SML KALE + F +D+ L+L+ G L I+
Sbjct: 102 AFASGELASLPEREKHLGSMLTKALEPLVCRNEFLNFQLDIRVLILDDDGCLLSTAINCC 161
Query: 459 SLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
+AL + GI YDL+ + + + ++P ++ E
Sbjct: 162 GVALVECGISTYDLIAASTACIYRDQVFLNPSAKVE 197
[215][TOP]
>UniRef100_A8NCK3 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea
okayama7#130 RepID=A8NCK3_COPC7
Length = 274
Score = 78.6 bits (192), Expect = 3e-13
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLY 242
I+ + R DGR ++ R A GSA G T+V+VSV GPRE+K ++ +
Sbjct: 21 ILNDAGFRSDGRRQYELRDLSIDLSRHGEADGSALISHGLTQVLVSVHGPREAKMRSHTF 80
Query: 243 SDTGRLNCNVSYTTFSTPVRGQG--SDHK--EYSSMLQKALEGAIILESFPKTTVDVFAL 410
D +N V+ +FST R + D + E+++ ++ E + +P++ +D++
Sbjct: 81 HDRANINVEVTVASFSTGERRKRLKGDKRILEFAATIKSTFEPVVRTSLYPRSQIDIYIQ 140
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+L+ G L I+ +LAL +AGI M D V ++S + ++D + EEN
Sbjct: 141 ILQQDGGTLQTCINGTTLALINAGIPMSDFVCAISGGVHSTSPMLDLTTLEEN 193
[216][TOP]
>UniRef100_Q54Q83 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
RepID=Q54Q83_DICDI
Length = 237
Score = 77.8 bits (190), Expect = 6e-13
Identities = 54/169 (31%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSD 248
+K + TR DGR + RP G++N A GSA +KV+ +V+GP E A
Sbjct: 1 MKTEHTRNDGRCENSIRPVESEQGSLNKADGSAKFSQDKSKVLAAVYGPIEVNSAR---- 56
Query: 249 TGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
++ + TF+ KE +++ A+E I+ +P+T + V V G
Sbjct: 57 KEKILKSYVEVTFTPAFGNTNYIDKEKELLIKNAVESMILTTLYPRTQISVILQVFSDDG 116
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGK--NLIIDPISEEEN 569
S + I+ A LAL DAGI M L+ SV++ C ++ +DP +EEEN
Sbjct: 117 SIVSCAINAACLALLDAGIEMNGLLGSVTL-CFNNDGSIYVDPSTEEEN 164
[217][TOP]
>UniRef100_C5M243 Exosome complex exonuclease RRP41 n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M243_CANTT
Length = 240
Score = 77.8 bits (190), Expect = 6e-13
Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRL 260
R DGR +++ R R N++ GS+Y E GNTKV+ +V GP E + ++ +S+ +
Sbjct: 10 RIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVVCTVQGPIEPQLRSQQHSEHANI 69
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N++ F+T R + + ++ E ++L+K +I++ +P+T + + VL G
Sbjct: 70 EINLTIANFATFERKKRNKNEKRLIELKNILEKTFMESIMINLYPRTNIIINIQVLSQDG 129
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L + + +LAL D+GI MYD V+S++ ++D + EEN
Sbjct: 130 GLLSAITNSITLALIDSGISMYDYVSSINCGLYDTTPLLDLNNLEEN 176
[218][TOP]
>UniRef100_A3LQW5 Exosome exoribonuclease n=1 Tax=Pichia stipitis RepID=A3LQW5_PICST
Length = 289
Score = 77.8 bits (190), Expect = 6e-13
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 39/212 (18%)
Frame = +3
Query: 48 GKKKPAIIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK 227
G +PA I E T P G RP F +TG + A+GS+Y E GN + VSV+GPR +
Sbjct: 20 GTAQPAKI-ESKTEPRIDGL---RPFFLKTGIIENANGSSYLEVGNNIIEVSVYGPRPIR 75
Query: 228 KAM----------------------LYSDTGRLNCNVSYTTFSTPVRGQG-----SDHKE 326
+ LY++T + + TT T V G S +
Sbjct: 76 GSFIDRASFSVECKFLPFISQPNEHLYNNTSISASSAANTTNQTNVNVNGRTGLTSIEHK 135
Query: 327 YSSMLQKALEGAIILESFPKTTVDVFALVLES------SGSDLPV------VISVASLAL 470
SS ++ +L +I+LE +PK+T+DVF ++ + S SD + V++ +S+AL
Sbjct: 136 ISSYIETSLLPSIVLEKYPKSTIDVFVTIISTDSSLGGSYSDTKMLSLVNWVLNASSVAL 195
Query: 471 ADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
D+GI + D+VTS L++DP +E
Sbjct: 196 VDSGIEVKDVVTSGVAHLQNDVLVLDPTEIQE 227
[219][TOP]
>UniRef100_B0ERA1 Exosome complex exonuclease RRP41, putative n=1 Tax=Entamoeba
dispar SAW760 RepID=B0ERA1_ENTDI
Length = 238
Score = 77.4 bits (189), Expect = 7e-13
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSD 248
I + R DGR + R +N + GSA GNT V VFGP E ++ +
Sbjct: 4 ISPEGYRLDGRRTTEMRKCEMEINFLNTSDGSARVRMGNTIVEAVVFGPLEGRRRN--RE 61
Query: 249 TGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALVLE 419
L + S TF+T R + + E + +L++ E II + P+T +D+ +++
Sbjct: 62 GAELMVSYSQATFATRKRREQMHDRTMIETAELLKQMYEQVIITKLLPETMIDLRVQIMQ 121
Query: 420 SSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
GS VI+ +LAL DAGI M D+V++ + +++D +EEN
Sbjct: 122 DDGSVTAAVINACTLALIDAGIPMIDIVSAAEGGYIDGKMVVDMNKDEEN 171
[220][TOP]
>UniRef100_UPI00003BD252 hypothetical protein DEHA0A13343g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD252
Length = 290
Score = 77.0 bits (188), Expect = 1e-12
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 26/174 (14%)
Frame = +3
Query: 111 QCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCN-VSYTTF 287
+ R F ++G V A+GSAY E G+T + VSVFGPR + + + + + C + Y T
Sbjct: 45 EVRKMFLKSGLVTNANGSAYLEVGDTIIEVSVFGPRPIRGSFIDRASFSVECKFLPYVTQ 104
Query: 288 STPVRGQG--------------SDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
+ G + ++ SS L+ +L I+LE +PK+T+D+F V+ ++
Sbjct: 105 PNEITFNGKATNFNNNGRPSLTNIEQKISSYLETSLLPCILLEKYPKSTIDIFVSVISTN 164
Query: 426 GSD---------LPVVISVASLALADAGILMYDLVTS--VSVSCLGKNLIIDPI 554
+ + +I+ +SLAL D+GI + D+VTS V+++ L +DPI
Sbjct: 165 SNPNSNSSLLNLINWIINCSSLALVDSGIELKDIVTSGQVNLNQKSNELTLDPI 218
[221][TOP]
>UniRef100_Q9LX74 AT3G46210 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LX74_ARATH
Length = 239
Score = 77.0 bits (188), Expect = 1e-12
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R DGR +Q RP ++ GSA G+TKV+ +V+GP+ K ++ C
Sbjct: 5 REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKK---NENAEKAC 61
Query: 267 NVSYTTFSTPVRGQ-GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPV 443
+ P GQ G KEY +L++ ++ +L P TT V V+ GS LP
Sbjct: 62 ---FEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPC 118
Query: 444 VISVASLALADAGILMYDLVTSVSVSCLGKN--LIIDPISEEE 566
I+ A AL DAGI M L ++ CL +N L++DP EE
Sbjct: 119 AINAACAALVDAGIPMKHLAVAI-CCCLAENGYLVLDPNKLEE 160
[222][TOP]
>UniRef100_Q2HRD9 Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3
exoribonuclease n=1 Tax=Medicago truncatula
RepID=Q2HRD9_MEDTR
Length = 241
Score = 77.0 bits (188), Expect = 1e-12
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
RPDGR +Q RP ++ A GSA G TKV+ +V+GP+ K +
Sbjct: 5 RPDGRSPNQLRPLACSHSVLHRAHGSATWAQGETKVLAAVYGPKAGTKKNENPE------ 58
Query: 267 NVSYTTFSTPVRGQ-GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPV 443
S P G G +EY +L+K LE I +P TT V +V+ G+ LP
Sbjct: 59 KASIEVIWKPNTGHVGQADREYEMILKKTLESICIRTIYPNTTTSV--IVVHDDGALLPC 116
Query: 444 VISVASLALADAGILMYDLVTSVSVSCLGKN-LIIDPISEEE 566
I+ A AL DAGI + L ++ S N +I+DP +EE
Sbjct: 117 AINAACAALVDAGIPLRHLAVAICCSVTDNNSIILDPSKKEE 158
[223][TOP]
>UniRef100_Q6BY29 DEHA2A12914p n=1 Tax=Debaryomyces hansenii RepID=Q6BY29_DEBHA
Length = 302
Score = 77.0 bits (188), Expect = 1e-12
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 26/174 (14%)
Frame = +3
Query: 111 QCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCN-VSYTTF 287
+ R F ++G V A+GSAY E G+T + VSVFGPR + + + + + C + Y T
Sbjct: 57 EVRKMFLKSGLVTNANGSAYLEVGDTIIEVSVFGPRPIRGSFIDRASFSVECKFLPYVTQ 116
Query: 288 STPVRGQG--------------SDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
+ G + ++ SS L+ +L I+LE +PK+T+D+F V+ ++
Sbjct: 117 PNEITFNGKATNFNNNGRPSLTNIEQKISSYLETSLLPCILLEKYPKSTIDIFVSVISTN 176
Query: 426 GSD---------LPVVISVASLALADAGILMYDLVTS--VSVSCLGKNLIIDPI 554
+ + +I+ +SLAL D+GI + D+VTS V+++ L +DPI
Sbjct: 177 SNPNSNSSLLNLINWIINCSSLALVDSGIELKDIVTSGQVNLNQKSNELTLDPI 230
[224][TOP]
>UniRef100_C5E0D5 ZYRO0G11814p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5E0D5_ZYGRC
Length = 245
Score = 76.6 bits (187), Expect = 1e-12
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 9/177 (5%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCR--PAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAM 236
I + R DGR +++ R T + +AA GS+Y E GN K+I V GP+E S ++
Sbjct: 6 IYSPEGLRVDGRRWNELRRFDCSINTHS-HAADGSSYLEQGNNKIITLVKGPKEPSLRSQ 64
Query: 237 LYSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTVD 398
+ L +V+ T FS R + S HK E + L + ++L +P+T +D
Sbjct: 65 MDPTKALLKVSVNITKFSKTERSKTS-HKNERRVLEIQTALTRTFNKNVMLHIYPRTLID 123
Query: 399 VFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+ VL+ G + +I+ +LAL DAGI M+D ++ VSV +++ S EEN
Sbjct: 124 IEIHVLQQDGGLVGTLINGITLALIDAGIAMFDYISGVSVGLYDTTPLLEVNSLEEN 180
[225][TOP]
>UniRef100_Q5CWV7 Archeo-eukaryotice exosomal RNAse PH n=2 Tax=Cryptosporidium parvum
RepID=Q5CWV7_CRYPV
Length = 303
Score = 76.3 bits (186), Expect = 2e-12
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Frame = +3
Query: 36 SPTTGKKKPA---IIKEDWT--RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIV 200
S T K+ P II E+ R D R F + RP RTG + A GSAY GNTKV+
Sbjct: 25 SSTLKKENPGNFNIISENKVLIRNDDRQFEELRPITIRTGVIENADGSAYFSIGNTKVLC 84
Query: 201 SVFGPRESKKAMLYSDTGRLNCNVSYTTFS---------TPVRGQG----SDHKEYSSML 341
++GP K+ + L+ +V YT S + V + SD K S +L
Sbjct: 85 GIYGPNLCKQNPIEDG---LSVSVEYTIGSFCRDSALAKSKVNTENIEIKSDEKIKSILL 141
Query: 342 QKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVS 521
+K + I E + ++++D + +++ GS IS A L+L +A I + L ++ ++
Sbjct: 142 EKVISSVICHEKYKRSSIDCYFYIIDDDGSAFSAAISAACLSLCNAKIEIIGLFSATNII 201
Query: 522 CLGKNLIID 548
+ N + +
Sbjct: 202 AVNSNSLFN 210
[226][TOP]
>UniRef100_C4M2G1 3' exoribonuclease family protein n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4M2G1_ENTHI
Length = 238
Score = 76.3 bits (186), Expect = 2e-12
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Frame = +3
Query: 69 IKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSD 248
I + R DGR + R ++ A GSA GNT V VFGP E ++ +
Sbjct: 4 ISPEGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNTIVEAVVFGPLEGRRRN--RE 61
Query: 249 TGRLNCNVSYTTFSTPVRGQGSDHK---EYSSMLQKALEGAIILESFPKTTVDVFALVLE 419
L + S TF+T R + + E + +L++ E II + P+T +D+ V++
Sbjct: 62 GAELMVSYSQATFATRKRREQMHDRTMIETAELLKQMYEQIIITKLLPETMIDLRVQVMQ 121
Query: 420 SSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
GS VI+ +LAL DAGI M D+V + + +++D +EEN
Sbjct: 122 DDGSVTAAVINACTLALIDAGIPMIDIVAAAEGGYIDGKMVVDMNKDEEN 171
[227][TOP]
>UniRef100_Q6BHJ0 DEHA2G18194p n=2 Tax=Debaryomyces hansenii RepID=Q6BHJ0_DEBHA
Length = 245
Score = 76.3 bits (186), Expect = 2e-12
Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAAS-GSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGRL 260
R DGR +++ R R ++S GS+Y E GNTK+I V GP E S ++ S +
Sbjct: 13 RIDGRRWNELRRFECRINTHPSSSDGSSYIEQGNTKIICMVQGPMEPSLRSQTNSSKASI 72
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N+S FST R + ++ E + L++ E ++I + +P+T + + VL G
Sbjct: 73 EINLSVANFSTIERKKRLKNEKRLIELKTTLERTFEQSVICKLYPRTVIQINLHVLCQDG 132
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L + + +LAL DAGI MYD V++++ + ++D + EEN
Sbjct: 133 GLLAGMTNAITLALIDAGIAMYDYVSAINAGLYDQTPLLDLNTLEEN 179
[228][TOP]
>UniRef100_A4HPG8 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
braziliensis RepID=A4HPG8_LEIBR
Length = 246
Score = 75.9 bits (185), Expect = 2e-12
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLYSDTGRLN 263
R DGR + R G ++A GS G +KV S+FGPRES K D +
Sbjct: 14 RLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIFGPRESLHKQEAKHDKVLVT 73
Query: 264 CNVSYTTFSTPVRGQGSDHKEYSSMLQKAL----EGAIILESFPKTTVDVFALVLESSGS 431
C V+ F+ R + S + A+ I+L +P + + ++ VL+ G+
Sbjct: 74 CEVAVAAFAGESRRNPQRRSKLSEDIDAAVVQVARSVILLSQYPNSQIHIYIEVLQQDGN 133
Query: 432 DLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQ 575
+ I+ A LAL DA + M D+V +SV L ++++ID ++E Q
Sbjct: 134 EKVACINAACLALVDANVAMRDVVCCISVGLLDEHMLIDLANDELRSQ 181
[229][TOP]
>UniRef100_B2WKB1 Exosome complex exonuclease RRP41 n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2WKB1_PYRTR
Length = 250
Score = 75.9 bits (185), Expect = 2e-12
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDT---GR 257
R DGR +++ R + AA GS+Y E GNTK++VSV GP E +++ +
Sbjct: 14 RLDGRRWNELRRIHAQISTQAAADGSSYLEQGNTKILVSVTGPHEGRQSGQRGGADKQAK 73
Query: 258 LNCNVSYTTFSTPVRGQGSDHKEYSSM---LQKALEGAIILESFPKTTVDVFALVLESSG 428
+ +++ FS R + K S M ++ A EG ++L +P +T+ + ++ G
Sbjct: 74 VEVEINFAGFSGVERRKRKSDKRTSEMEHCIRSAFEGVLLLHLYPHSTITLNIHIVSQDG 133
Query: 429 SDLPVVISVASLALADAGILMYDLV------TSVSVSCLGKNLIIDPISEEENCQD 578
S L I+ ++LAL DAGI M D + +S S S DP+ + N ++
Sbjct: 134 SLLAACINASTLALIDAGIPMTDYLVACTAASSASASAADNASADDPLLDLNNQEE 189
[230][TOP]
>UniRef100_A3GGM6 Predicted protein n=1 Tax=Pichia stipitis RepID=A3GGM6_PICST
Length = 241
Score = 75.1 bits (183), Expect = 4e-12
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMLYSDTGRL 260
R DGR +++ R R N++ GS+Y E GNTKVI V GP E + ++ S+ L
Sbjct: 10 RIDGRRWNEIRNFECRINTHPNSSDGSSYIEQGNTKVICVVQGPMEPALRSQANSNEATL 69
Query: 261 NCNVSYTTFSTPVRGQGSDHK----EYSSMLQKALEGAIILESFPKTTVDVFALVLESSG 428
N+S FST R + S + + + L++ + +++ +P+T + + VL G
Sbjct: 70 EVNLSVANFSTTERKKRSKSEKRMVQLKTTLERTFQQSVMCNLYPRTLIRIDLHVLSQDG 129
Query: 429 SDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
L + +LAL DAG+ MYD V +++ + ++D EEN
Sbjct: 130 GMLAACTNAMTLALIDAGVSMYDYVAAMTAGLHDQTPLLDMNGLEEN 176
[231][TOP]
>UniRef100_Q74NF6 NEQ248 n=1 Tax=Nanoarchaeum equitans RepID=Q74NF6_NANEQ
Length = 233
Score = 75.1 bits (183), Expect = 4e-12
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R DGR +++ R + G ++ A GSAY GNT I +V Y GR
Sbjct: 2 RFDGRDYNEIRDTEMKIGVISKADGSAYCRTGNTIAIAAV-----------YLKPGREQS 50
Query: 267 NVSYTTFSTPVRGQ-----GSDHKEY--SSMLQKALEGAIILESFPKTTVDVFALVLESS 425
N+ + P G+ G +E S ++ KALE AII E P T++ ++++
Sbjct: 51 NLKVSYRMLPFAGEERKGLGLTRREIELSYIIAKALEPAIIFEEIPYLTIEASVEIIKAD 110
Query: 426 GSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
I+ SLALA AGI M LV +++V +G+ +++D +EE+
Sbjct: 111 AGTRVAAINALSLALAHAGIPMKALVGAIAVGKVGEKIVLDLNKQEED 158
[232][TOP]
>UniRef100_C5KIM5 Exosome complex exonuclease RRP41, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5KIM5_9ALVE
Length = 248
Score = 74.7 bits (182), Expect = 5e-12
Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLN- 263
R DGR ++ R + G +A GSA + G TKV+ VFGPR + A + G +
Sbjct: 14 RLDGRRPNELRHLTLKIGDAPSADGSATLQQGLTKVVAHVFGPRPLQAASVGRAAGTMAR 73
Query: 264 -----CNVSYTT--FSTPVRGQGS----DHKEYSSMLQKALEGAIILESFPKTTVDVFAL 410
NV Y T F+T R + + + E LQ+ ++ A++ E FPK+ +DV
Sbjct: 74 QGEAIVNVVYRTSSFATIDRKRRTTGDRNSTERQLWLQRIIQDAVLTEMFPKSCIDVHLT 133
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPI--SEEENC 572
+L+ GS L ++ A+ AL DAGI + D+ ++ +V + I + +E E C
Sbjct: 134 ILQEDGSALAACVNAAAAALVDAGIPIKDMFSACTVGLVNNQKPIVDLNHAESEGC 189
[233][TOP]
>UniRef100_Q75C81 ACR035Wp n=1 Tax=Eremothecium gossypii RepID=Q75C81_ASHGO
Length = 246
Score = 74.3 bits (181), Expect = 6e-12
Identities = 53/172 (30%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Frame = +3
Query: 57 KPAIIKEDWTRPDGRGFHQCRPAFFRTGA-VNAASGSAYAEFGNTKVIVSVFGPRE-SKK 230
K I + R DGR +++ R AA GS+Y E GN K+I V GP E + +
Sbjct: 3 KTEIYSPEGLRLDGRRWNELRRFECSINTHPTAADGSSYLEQGNNKLITLVTGPHEPALR 62
Query: 231 AMLYSDTGRLNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTT 392
+ + L V+ T F+ R + + HK E + L + E ++L+ +P+T
Sbjct: 63 SQVNPSKATLTVTVNMTKFAAAERSK-TGHKNERRILEMQTALVRTFEKNVMLQLYPRTA 121
Query: 393 VDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
+DV VL++ G L +I+ +LAL DAGI MY+ ++ +SV ++D
Sbjct: 122 IDVQVHVLQNDGGVLGSMINGITLALIDAGIAMYEYISGISVGLYDTTPLLD 173
[234][TOP]
>UniRef100_UPI0000E4A5EC PREDICTED: similar to ENSANGP00000026025, partial n=2
Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A5EC
Length = 104
Score = 73.9 bits (180), Expect = 8e-12
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +3
Query: 75 EDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTG 254
E+ R DGR + RP F + GAV+ A GS Y E NTKVI +V+GPRE + + G
Sbjct: 3 EEGKRQDGRSPLEIRPIFLKAGAVSQAKGSCYMEMKNTKVICAVYGPREVPRRDGFVING 62
Query: 255 RLNCNVSYTTFSTPVR-GQGSDH--KEYSSMLQKALEGAIIL 371
+L C + TF++ VR G + H K+ + +Q+ALE A+ L
Sbjct: 63 QLRCEFKFATFASEVRHGHLTSHTEKDLALQVQQALEPAVCL 104
[235][TOP]
>UniRef100_UPI000023E981 hypothetical protein FG04277.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023E981
Length = 283
Score = 73.6 bits (179), Expect = 1e-11
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 33/190 (17%)
Frame = +3
Query: 99 RGFHQCRPAFFRTGAVNAASGSAYAEFGNT--------KVIVSVFGPRESKKAMLYSDTG 254
R + R + +TG +ASGSAY E + K+ +V GPR ++ +S
Sbjct: 31 RAANGIRAQYLKTGVTPSASGSAYLEIESQDASGSKGMKLTCTVHGPRSLPRSAPFSPHM 90
Query: 255 RLNCNVSYTTFSTPVRG---QGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLE-- 419
L+ +V Y F+T R + S ++ SS L+ AL GAII + +PK+ VDV V+E
Sbjct: 91 VLSTHVKYAPFATRQRRGYLRDSSERDLSSHLEAALRGAIIADRWPKSGVDVIVTVIEGD 150
Query: 420 -------SSGSD-------LPVVISVASLALADAGILMYDLVT-SVSVSCLGKN-----L 539
GS+ L I+VA+ ALADAGI D V+ V+ LG++ +
Sbjct: 151 QAREVAVEQGSEEWDMMNVLSGCITVAAAALADAGIDCVDTVSGGVAALVLGQDNNEPIM 210
Query: 540 IIDPISEEEN 569
++DP+ E +
Sbjct: 211 VLDPVPSEHS 220
[236][TOP]
>UniRef100_B6ACS1 3' exoribonuclease protein, putative n=1 Tax=Cryptosporidium muris
RN66 RepID=B6ACS1_9CRYT
Length = 295
Score = 73.6 bits (179), Expect = 1e-11
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 24/191 (12%)
Frame = +3
Query: 78 DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGR 257
++ R D R ++ RP +TG V GSAY G T+V+ ++ GP+ +K ++ ++ G
Sbjct: 43 NYIRNDSRIPNEVRPINIKTGTVATCDGSAYFSIGRTRVLCTINGPKLTKSSL--NEIG- 99
Query: 258 LNCNVSY--TTFSTPVRGQGSDHK-----------EYSSM-LQKALEGAIILESFPKTTV 395
L+ V Y + F +R G+ +K +Y S+ L+K ++ I E + + ++
Sbjct: 100 LSVTVDYRLSPFCKKMRQYGNINKSNLNTDYKAEEKYQSLTLEKVIQSIICREKYTRMSI 159
Query: 396 DVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKN----------LII 545
D + ++E G L IS SLAL DA I + L +SV+V + N I+
Sbjct: 160 DCYIYIIEDDGCALSAAISCLSLALCDAKIEIIGLFSSVTVIAIPNNSEVKSDCKYICIL 219
Query: 546 DPISEEENCQD 578
DP +E N ++
Sbjct: 220 DPTYDEINLEN 230
[237][TOP]
>UniRef100_Q4Q1B7 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
major RepID=Q4Q1B7_LEIMA
Length = 246
Score = 73.2 bits (178), Expect = 1e-11
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLYSDTGRLN 263
R DGR + R G ++A GS G +KV VFGPRES K D G +
Sbjct: 14 RLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEAKHDKGLVT 73
Query: 264 CNVSYTTFSTPVRGQGSDHKEYSSMLQKAL----EGAIILESFPKTTVDVFALVLESSGS 431
C V+ F+ R + S + A+ I+L +P + + ++ VL+ G+
Sbjct: 74 CEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQVARSVILLSQYPNSQIHIYIEVLQQDGN 133
Query: 432 DLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQ 575
+ ++ A LAL DA + M D V + L ++++ID S E Q
Sbjct: 134 EKIACVNAACLALIDANVAMRDAVCCIDAGILDEHMLIDLTSNELRSQ 181
[238][TOP]
>UniRef100_A2DCK7 3' exoribonuclease family, domain 1 containing protein n=1
Tax=Trichomonas vaginalis G3 RepID=A2DCK7_TRIVA
Length = 241
Score = 73.2 bits (178), Expect = 1e-11
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R DGR ++ R + G + +GS++ + G T+VI +FGPR+++ + +
Sbjct: 11 RIDGRPPNEMRLVEAKIGTIPGCTGSSHFKIGQTEVIAQIFGPRDNRSG---DNAAEIRV 67
Query: 267 NVSYTTFSTPVRGQGSDH----KEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSD 434
Y F+ + +E ++++ E AI E FP + + + V++ GS
Sbjct: 68 TFEYADFAKVPHASDTSMTRRGRESEVIMKRTFEEAIKRELFPHSKILIAITVIQDDGSC 127
Query: 435 LPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEENCQ 575
I+ A+LAL DAGI M+D V S++V+ +D E N +
Sbjct: 128 QSAAINAATLALIDAGIPMFDFVVSMTVALYDDKCFLDAGRAESNAR 174
[239][TOP]
>UniRef100_B7FYW1 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FYW1_PHATR
Length = 212
Score = 72.8 bits (177), Expect = 2e-11
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Frame = +3
Query: 144 VNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNCNVSYTTFSTPVRGQGSD-- 317
+ AA GSA E G+TKVI V GP + + L +LN F G+ +
Sbjct: 2 LEAAQGSALVELGHTKVIGQVLGPVTASSSHLPPSL-QLNMEEGVMHFELLSTGKINSWT 60
Query: 318 ---HKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISVASLALADAGIL 488
+ +S L AL ++ L +PK + V VL+ GS LP I+ A+LALADA +
Sbjct: 61 IARETDLASNLSDALSASVPLRQYPKCALLVKITVLQDDGSILPACITAATLALADASVE 120
Query: 489 MYDLVTSVSVSCLGKNLIIDPISEEENCQD 578
MYD+V + +V+ L+ DP E + D
Sbjct: 121 MYDVVAASTVAVCDGLLVADPTLREVSAAD 150
[240][TOP]
>UniRef100_Q4P9I6 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P9I6_USTMA
Length = 273
Score = 72.8 bits (177), Expect = 2e-11
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 7/167 (4%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVN--AASGSAYAEFGNTKVIVSVFGPRESKK-AMLYSDTGR 257
R DGR + R + G AA G A G T V +VFGPRE++ A + D
Sbjct: 13 RIDGRKQFELRSIGIQLGGSQDTAADGCAQITQGLTIVSATVFGPREARSGANVMHDRAS 72
Query: 258 LNCNVSYTTFSTPVRGQGS--DHK--EYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
+N VS + + R + + D + E+++ ++ E I +P++ +D+F V +
Sbjct: 73 VNVEVSVAPWGSMERRRRNRGDRRLVEFANSIKSTFEPVIHTHLYPRSQIDIFVQVHQQD 132
Query: 426 GSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEE 566
G LP I+ ++LAL DAGI M D V SVS + ++D + EE
Sbjct: 133 GGVLPAAINASTLALLDAGIAMQDFVASVSCGIHSTSAMLDLSNTEE 179
[241][TOP]
>UniRef100_A7P578 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=2
Tax=Vitis vinifera RepID=A7P578_VITVI
Length = 243
Score = 72.4 bits (176), Expect = 2e-11
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGRLNC 266
R DGR +Q RP +N A GSA G+TKV+ +V+GP+ K ++ C
Sbjct: 5 RDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKK---NENPEKAC 61
Query: 267 NVSYTTFSTPVRGQ-GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDLPV 443
P GQ G KEY +L++ L+ +L P TT + V+ G+ LP
Sbjct: 62 ---IEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNTTTSIIIQVVSDDGALLPC 118
Query: 444 VISVASLALADAGILMYDLVTSVSVSCLGKN--LIIDPISEEE 566
I+ A AL DA I + L ++ CL ++ +I+DP EE
Sbjct: 119 AINAACAALVDAAIPLKHLAVAI-CCCLTESGYVILDPTKVEE 160
[242][TOP]
>UniRef100_C1MWG2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MWG2_9CHLO
Length = 245
Score = 72.4 bits (176), Expect = 2e-11
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLYSDTGRLN 263
R DGR + R G + AA GSA GNT+V+ +V GPRE + + +
Sbjct: 10 RLDGRRPKETRQMRCAMGVLPAADGSAEFRAGNTRVMCAVHGPRECVNRGERDDERAIIK 69
Query: 264 CNVSYTTFST---PVRGQGSDHK-EYSSMLQKALEGAIILESFPKTTVDVFALVLESSGS 431
C S FST RG+G E + ++++ALE +++ P++ ++V VL++ G
Sbjct: 70 CEFSQAAFSTGERRARGKGDRRSVELALVIRQALEATVLVHLAPRSEINVMIQVLQADGG 129
Query: 432 DLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
I+ A LA+A+AGI M D + + S L ++D
Sbjct: 130 VRAAAINAAVLAIANAGIPMKDTMAACSAGYLDGTPLLD 168
[243][TOP]
>UniRef100_B9RRX9 Exosome complex exonuclease RRP46, putative n=1 Tax=Ricinus
communis RepID=B9RRX9_RICCO
Length = 211
Score = 72.4 bits (176), Expect = 2e-11
Identities = 56/166 (33%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Frame = +3
Query: 78 DWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYSDTGR 257
D R DGR +Q RP +N A GSA G+TKV+ +V+GP+ K ++
Sbjct: 2 DIDRDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKK---NENPE 58
Query: 258 LNCNVSYTTFSTPVRGQ-GSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSD 434
C P GQ G KEY +L++ L+ +L P TT V V+ G+
Sbjct: 59 KAC---IEVIWKPKTGQIGKVEKEYEMILKRTLQTICVLTINPNTTTSVIVQVVHDDGAL 115
Query: 435 LPVVISVASLALADAGILMYDLVTSVSVSCLGKN--LIIDPISEEE 566
L I+ A AL DAGI M L ++ CL ++ +I+DP EE
Sbjct: 116 LTCAINAACAALVDAGIPMKHLAVAI-CCCLSESGYVILDPTKLEE 160
[244][TOP]
>UniRef100_Q4SLK0 Chromosome 15 SCAF14556, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4SLK0_TETNG
Length = 291
Score = 72.0 bits (175), Expect = 3e-11
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 52/220 (23%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-------- 221
++ + R DGR + R R G A GSAY E GNTK + V+GP E
Sbjct: 6 LLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEVCVCVCVC 65
Query: 222 ---------SKKAMLYSDTGRLNCNVSYTTFSTPVRGQ--GSDHK--EYSSMLQKALEGA 362
++ D +NC S TFST R + D K E S L++ E A
Sbjct: 66 VCVCVCQMRGSRSRARHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAA 125
Query: 363 IILESFPKTTVDVFALV-------------------------------LESSGSDLPVVI 449
++ + FP++ +D++ V L+S G + V +
Sbjct: 126 VMTQLFPRSQIDIYVKVGLVLMFSLLESRLSQAFYLSVMDKDPPCLQILQSDGGNYSVCV 185
Query: 450 SVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
+ A+LA+ DAGI M D V + +V + + + D EE+
Sbjct: 186 NAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEES 225
[245][TOP]
>UniRef100_Q5BZN7 SJCHGC06185 protein (Fragment) n=1 Tax=Schistosoma japonicum
RepID=Q5BZN7_SCHJA
Length = 251
Score = 72.0 bits (175), Expect = 3e-11
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLYSDTGRLN 263
R DGR ++ R + G+ N+ G + GNTKVI SV GP + K D +
Sbjct: 3 RVDGRRPNELRRVHCQFGSGNS-DGIVFLHQGNTKVIASVVGPHAPRTKGDGNPDGATII 61
Query: 264 CNVSYTTFSTP------VRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESS 425
C + F++ V ++S+ +++ + E +P + +D+F V++S
Sbjct: 62 CQFTKPPFASTSGERRKVASNDRSANDFSTAIEEIFSCVVRTEKYPMSQIDIFLEVIQSD 121
Query: 426 GSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
GS+ ++ +LAL DAGI M+ LV++ +V G + D EEN
Sbjct: 122 GSEFACAVNATTLALTDAGIEMHYLVSAATVGLWGSRVFADLCRFEEN 169
[246][TOP]
>UniRef100_B7GAV6 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1
RepID=B7GAV6_PHATR
Length = 274
Score = 71.6 bits (174), Expect = 4e-11
Identities = 55/163 (33%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTG--AVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMLYSDTGR 257
R DGR H+ R + +V+ SGSA E G T V+ +V GP + ++A D
Sbjct: 17 RNDGRKPHEIRRMRVQMSPLSVSTISGSALVEMGLTVVLATVRGPVDCLRRADENPDQAV 76
Query: 258 LNCNVSYTTFSTPVRGQGSDHK------EYSSMLQKALEGAIILESFPKTTVDVFALVLE 419
L+ V FS+ + ++ K E S ML++A+E AI+L +PK+ +++ VL
Sbjct: 77 LDVTVQSAPFSSSADRRVANPKTDRRLIEASHMLKRAMEAAILLHLYPKSRIELVVSVLA 136
Query: 420 SSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIID 548
G L I+ A+LAL DAGI M D V + S G + D
Sbjct: 137 DDGGRLCAAINAATLALMDAGIPMKDFVCACSAGLPGTSATPD 179
[247][TOP]
>UniRef100_O42872 Exosome complex component ski6 n=1 Tax=Schizosaccharomyces pombe
RepID=RRP41_SCHPO
Length = 242
Score = 71.6 bits (174), Expect = 4e-11
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 5/173 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESK-KAMLY 242
I+ + R DGR + + R R G + +GSA+ E GNTKV+ V GP E K+
Sbjct: 6 ILSLEGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLCIVDGPSEPVIKSKAR 65
Query: 243 SDTGRLNCNVSYTTFST-PVRGQGSDHKEYSSM---LQKALEGAIILESFPKTTVDVFAL 410
+D +N ++ +FST V+ + + LQ E I E +P++ + V+
Sbjct: 66 ADRTFVNVEINIASFSTIDVKKRFKSDRRIQLQCLALQNTFEEIIQTELYPRSQISVYLH 125
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
VL+ G+ + I+ +LAL DAGI + D V + + ++++D S EE+
Sbjct: 126 VLQDDGAVMASCINATTLALIDAGIPVKDFVCCSTAGIVESDMLLDLNSLEES 178
[248][TOP]
>UniRef100_B8C2C5 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8C2C5_THAPS
Length = 172
Score = 70.9 bits (172), Expect = 7e-11
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Frame = +3
Query: 87 RPDGRGFHQCRPAFFRTGAV------------NAASGSAYAEFGNTKVIVSVFGPRES-K 227
R DGR H+ R GA+ +A SGSA G T+V+ V GP ++ +
Sbjct: 9 RSDGRRPHEIRHMSCHLGALPSTTACGSALPTSACSGSALVSMGLTQVLCVVRGPSDAGR 68
Query: 228 KAMLYSDTGRLNCNVSYTTFSTP----VRGQGSDHK--EYSSMLQKALEGAIILESFPKT 389
+ D L + + FS P V SD + E S +LQ AL +I+L +PK+
Sbjct: 69 RTEELPDRATLEVTMRTSPFSPPGDRRVTNPTSDRRLIEQSHLLQTALSASILLHLYPKS 128
Query: 390 TVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVTSVS 515
+ V +VL G L I+ A+LAL DAGI + D+V + S
Sbjct: 129 KISVTVMVLADDGGRLEAAINAATLALIDAGIPLKDMVCACS 170
[249][TOP]
>UniRef100_A8PFJ3 3' exoribonuclease family, domain 1 containing protein n=1
Tax=Brugia malayi RepID=A8PFJ3_BRUMA
Length = 277
Score = 70.9 bits (172), Expect = 7e-11
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Frame = +3
Query: 102 GFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKA--------MLYSDTGR 257
G + R +TG ++ G+ Y EFG+TK+I SV GP+E K+ +Y
Sbjct: 45 GQNTFRSIVMQTGVLHDQKGTVYVEFGSTKIICSVDGPKEITKSADVDPTEGQIYVFLKN 104
Query: 258 LNCNVSYTTFSTPVRGQGSDHKEYSSMLQKALEGAIILESFPKTTVDVFALVLESSGSDL 437
++ + + S + + ++ AL + LE F K +DV VL G L
Sbjct: 105 ISAESNSLSGSNSFSASNKESNRIRNAIESALRSIVCLELFCKAQIDVEITVLNDDGGVL 164
Query: 438 PVVISVASLALADAGILMYDLVTSVSVSCL-GKNLIIDP 551
+ +SLAL D+GI +YD+ + + L +I+DP
Sbjct: 165 AASLIASSLALIDSGIQVYDVCVAAHIVMLTDGRIIVDP 203
[250][TOP]
>UniRef100_Q5KHU0 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q5KHU0_CRYNE
Length = 262
Score = 70.9 bits (172), Expect = 7e-11
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 5/173 (2%)
Frame = +3
Query: 66 IIKEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMLYS 245
I+ + R D R ++ R F+ +++ GS+ A G T V VSVFGPRE + L S
Sbjct: 8 ILNDGGLRQDARRPYELRSTSFQLSTHSSSDGSSTATQGLTTVEVSVFGPREPRNRGLAS 67
Query: 246 -DTGRLNCNVSYTTFSTPV---RGQGSDH-KEYSSMLQKALEGAIILESFPKTTVDVFAL 410
D ++ V ++ R +G +E + +++ E I+ +P++ + +
Sbjct: 68 HDRAVVSVEVGVVPWAAGAGARRTRGDKRLQEIGAAIRQTFEPVIMTHLYPRSEIAIHVQ 127
Query: 411 VLESSGSDLPVVISVASLALADAGILMYDLVTSVSVSCLGKNLIIDPISEEEN 569
VL + G LP I+ +LAL DAGI + D V+S+S+ ++D EE+
Sbjct: 128 VLSADGGILPTSINATTLALIDAGIALLDYVSSISIGLHLLQPLLDLSQPEES 180