[UP]
[1][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 220 bits (560), Expect = 7e-56
Identities = 102/189 (53%), Positives = 134/189 (70%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
D + GLAT S++TYPI E L D++++L P Q+A+G + PL+ A + ++SG
Sbjct: 161 DEIAHGLATRSIVTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIA 220
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T+ Q QMPH D
Sbjct: 221 YSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDV 280
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QI
Sbjct: 281 VSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQI 340
Query: 542 NYRQRFGWF 568
NY QRF WF
Sbjct: 341 NYDQRFAWF 349
[2][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 220 bits (560), Expect = 7e-56
Identities = 102/189 (53%), Positives = 134/189 (70%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
D + GLAT S++TYPI E L D++++L P Q+A+G + PL+ A + ++SG
Sbjct: 971 DEIAHGLATRSIVTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAVQQKSSSGRIA 1030
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA G+LSHFLG+GGT+ F + TSS FV+ +LR+ +WG T T+ Q QMPH D
Sbjct: 1031 YSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTITLEQLSQMPHVDCDVDV 1090
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
LKIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QI
Sbjct: 1091 VSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQI 1150
Query: 542 NYRQRFGWF 568
NY QRF WF
Sbjct: 1151 NYDQRFAWF 1159
[3][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 219 bits (559), Expect = 9e-56
Identities = 105/189 (55%), Positives = 133/189 (70%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+R V+GLAT+ VL YPI P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +
Sbjct: 1005 ERYVQGLATEGVLEYPISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVS 1064
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA G+LSHFLGVGG + F V TSS FVS +LR+ +WG T+ Q QMPH D+ G
Sbjct: 1065 YSYAAGLLSHFLGVGGILHFKVQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGV 1124
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
+ LKIQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ I
Sbjct: 1125 TASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAI 1184
Query: 542 NYRQRFGWF 568
NY+Q FGWF
Sbjct: 1185 NYKQAFGWF 1193
[4][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 210 bits (535), Expect = 5e-53
Identities = 95/191 (49%), Positives = 138/191 (72%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+R+V+GL+ ++ LTYPI P L DLD+VL +A+GT+ T +P++LA + + + +
Sbjct: 994 ERLVRGLS-ENPLTYPIKPGHLEDLDLVLKSGSIAIGTYTMTKVPVSLAMRVDSAAKRQA 1052
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA G+LSHFLGVGG + FSVHST+S FVSC LR+ +WGT PT + Q+PH D+
Sbjct: 1053 YSYAAGVLSHFLGVGGDIIFSVHSTASTFVSCSLRVALWGTIPTTEELAQIPHVDVTLDA 1112
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI+++ LC++I
Sbjct: 1113 KATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREI 1172
Query: 542 NYRQRFGWFMV 574
NY Q F WFM+
Sbjct: 1173 NYNQHFAWFML 1183
[5][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 209 bits (533), Expect = 9e-53
Identities = 100/191 (52%), Positives = 139/191 (72%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+++V+GLA + L+YPI L+DL+++L+P Q+A+GT+A P++LA K +TSG
Sbjct: 161 EKLVRGLA-EQPLSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTA 219
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P Q QMPH D+
Sbjct: 220 YSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNV 279
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++I
Sbjct: 280 DASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREI 339
Query: 542 NYRQRFGWFMV 574
NY+QRF W ++
Sbjct: 340 NYKQRFAWCLL 350
[6][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 209 bits (533), Expect = 9e-53
Identities = 100/191 (52%), Positives = 139/191 (72%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+++V+GLA + L+YPI L+DL+++L+P Q+A+GT+A P++LA K +TSG
Sbjct: 998 EKLVRGLA-EQPLSYPIEARHLTDLNLMLAPKQIAVGTYAMITFPVSLAAKLQSTSGRTA 1056
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA G+LSHFLGVGGT+ F V +TSS FV+ KLRI +WGT P Q QMPH D+
Sbjct: 1057 YSYAAGLLSHFLGVGGTIHFVVRTTSSAFVTSKLRIALWGTVPETDQLAQMPHVDVEVNV 1116
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
L+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++I
Sbjct: 1117 DASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREI 1176
Query: 542 NYRQRFGWFMV 574
NY+QRF W ++
Sbjct: 1177 NYKQRFAWCLL 1187
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 206 bits (523), Expect = 1e-51
Identities = 95/191 (49%), Positives = 136/191 (71%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+R+V+GL+ ++ LTYPI L DLD++L +A+GT+ T +P++LA + + + +
Sbjct: 161 ERLVRGLS-ENPLTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQA 219
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT PT + Q+PH D+
Sbjct: 220 YSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDT 279
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++I
Sbjct: 280 KATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREI 339
Query: 542 NYRQRFGWFMV 574
NY Q F WFM+
Sbjct: 340 NYNQHFAWFML 350
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 206 bits (523), Expect = 1e-51
Identities = 95/191 (49%), Positives = 136/191 (71%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+R+V+GL+ ++ LTYPI L DLD++L +A+GT+ T +P++LA + + + +
Sbjct: 993 ERLVRGLS-ENPLTYPIESRHLEDLDLILKSGSIAVGTYTMTKVPVSLAMRIDSAAKRQA 1051
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YSYA GILSHFLGVGG + FSVHST+S FVSC LRI +WGT PT + Q+PH D+
Sbjct: 1052 YSYAAGILSHFLGVGGEIIFSVHSTASTFVSCSLRIALWGTVPTTDELAQIPHVDVTLDT 1111
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
L+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++I
Sbjct: 1112 KATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREI 1171
Query: 542 NYRQRFGWFMV 574
NY Q F WFM+
Sbjct: 1172 NYNQHFAWFML 1182
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 199 bits (506), Expect = 1e-49
Identities = 95/173 (54%), Positives = 120/173 (69%)
Frame = +2
Query: 50 IGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGG 229
I P+ L DLD+ L+P +A+GT A T PL+ A K V+ S +YSYA G+LSHFLGVGG
Sbjct: 1 ISPKHLRDLDLTLTPRTMAVGTQATTNFPLSFATKQVSASKRVSYSYAAGLLSHFLGVGG 60
Query: 230 TVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYSTANF 409
+ F V TSS FVS +LR+ +WG T+ Q QMPH D+ G + LKIQSPFY+TAN
Sbjct: 61 ILHFKVQCTSSAFVSSRLRVALWGAQITMIQLCQMPHVDVDVGVTASLKIQSPFYATANL 120
Query: 410 GSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWF 568
G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INY+Q FGWF
Sbjct: 121 GDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQAFGWF 173
[10][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 194 bits (494), Expect = 3e-48
Identities = 95/180 (52%), Positives = 129/180 (71%)
Frame = +2
Query: 35 VLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHF 214
+LT + L+DLD++L+P QLA+GT A T PL+ AEKS+T++ ETYSY+ G+LSHF
Sbjct: 171 ILTLSVESTHLADLDLLLAPQQLAIGTTATTNFPLSFAEKSITSTKRETYSYSAGLLSHF 230
Query: 215 LGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGGSGELKIQSPFY 394
LG+GG +RF VHSTSS ++ KLR+ +W + + + H + G IQ+
Sbjct: 231 LGIGGKLRFRVHSTSSCLLTSKLRVFLWEHSQPQCRRPKF-HTLTLMGLDWRAVIQAACC 289
Query: 395 STANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQRFGWFMV 574
+TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINY+QRFGWFM+
Sbjct: 290 ATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQRFGWFMI 349
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 124 bits (310), Expect = 7e-27
Identities = 65/191 (34%), Positives = 100/191 (52%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+ + + LA VL+YP L DLD+ L P +L LG T +PL+ A KS +
Sbjct: 173 EELPRTLAPSPVLSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVL 231
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YS+A L+HF G+GG + V+ S+ V+ KL I +W + H D G
Sbjct: 232 YSHAAARLAHFQGIGGVLHGVVYLVGSQLVASKLHISMWSKEQHVQHQAMNVHVDTDTGV 291
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
+ +L I+ FY+++ +G GA + L SPM+P +++ F+ +I G +C+ I
Sbjct: 292 AFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTI 351
Query: 542 NYRQRFGWFMV 574
N+ QRFGWF V
Sbjct: 352 NFTQRFGWFAV 362
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 122 bits (306), Expect = 2e-26
Identities = 66/191 (34%), Positives = 100/191 (52%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+ + + LA VL+YP L DLD+ L P +L LG T +PL+ A KS +
Sbjct: 161 EELPRTLAPSPVLSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVL 219
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YS+A L+HF G+GG + V+ S+ V+ + RI +W I H D G
Sbjct: 220 YSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGV 279
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
+ +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+ I
Sbjct: 280 AFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTI 339
Query: 542 NYRQRFGWFMV 574
N+ QRFGWF V
Sbjct: 340 NFTQRFGWFAV 350
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 122 bits (306), Expect = 2e-26
Identities = 66/191 (34%), Positives = 100/191 (52%)
Frame = +2
Query: 2 DRMVKGLATDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIET 181
+ + + LA VL+YP L DLD+ L P +L LG T +PL+ A KS +
Sbjct: 844 EELPRTLAPSPVLSYPFQNSFLEDLDLFLPPKRLTLGERETTIIPLSFA-KSKKSGDAVL 902
Query: 182 YSYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGTTPTIAQTGQMPHCDIVEGG 361
YS+A L+HF G+GG + V+ S+ V+ + RI +W I H D G
Sbjct: 903 YSHAAARLAHFQGIGGVLHGVVYLVGSQLVASQSRISMWSKEQHIQHQAVNVHVDTDTGV 962
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQI 541
+ +L I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+ I
Sbjct: 963 AFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTI 1022
Query: 542 NYRQRFGWFMV 574
N+ QRFGWF V
Sbjct: 1023 NFTQRFGWFAV 1033
[14][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 73.6 bits (179), Expect = 1e-11
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Frame = +2
Query: 26 TDSVLTYPIGPESLSDLDMVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGIL 205
T L +PI P+ + ++DM + P ++ L T A+T L A ++G E + I+
Sbjct: 436 TKPALEFPIVPQDIHEIDMRVGPFRIPLATRASTLLGFQFARLLTYSTGNEIPHFKQAIM 495
Query: 206 SHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWGT-TP--TIAQTGQMPHCDIVEGGSGELK 376
S + G GT + + V C L I + + TP Q + PH +++GG GE
Sbjct: 496 SFYHGAAGTYHGEIIKVGTAQVQCDLLIYMSNSRTPKTNYYQIYREPHF-LLKGGEGEFA 554
Query: 377 IQSPF-YSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 553
++ P + A+F S G ++ + P AP+ V + FEF + IDS + + +
Sbjct: 555 LRIPAPEAIASFHSGGVFLHIVVAAGPTAPDGVAAPFEFMVNSKRIDSAGYVPRVMYQTM 614
Query: 554 RFGW 565
F W
Sbjct: 615 EFSW 618
[15][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 57.0 bits (136), Expect = 1e-06
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 185 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 358
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 359 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 502
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337
[16][TOP]
>UniRef100_B5KFZ7 Polyprotein P2 n=1 Tax=Arabis mosaic virus RepID=B5KFZ7_ARMV
Length = 1110
Score = 56.6 bits (135), Expect = 1e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 80 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 259
+ + P + LGT +A L +++ + Y+Y +LS +LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLGTTSAYKSVSLLLGQTLVDGAHKVYNYNNTLLSFYLGIGGVVKGRVHICS 846
Query: 260 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------AN 406
LR++ W G T Q + P C + E G+ E++I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYVDENGNFEIEIRSPYHRTPLRLRDAQVAS 906
Query: 407 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 529
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 SFTSTLNFYAI--SGPIAPSGEIAKMPVVVQIDEI-ALPDL 944
[17][TOP]
>UniRef100_B4YNP8 Polyprotein 2 n=1 Tax=Arabis mosaic virus RepID=B4YNP8_ARMV
Length = 1118
Score = 56.6 bits (135), Expect = 1e-06
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Frame = +2
Query: 80 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 259
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 795 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 854
Query: 260 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------AN 406
LR++ W G T Q + P C I E G+ E++I+SP++ T A+
Sbjct: 855 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQAAS 914
Query: 407 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 529
+ F+ I S P+AP +K ++I+ I + PDL
Sbjct: 915 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQINEI-ALPDL 952
[18][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 56.2 bits (134), Expect = 2e-06
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 188 YAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEGG 361
Y+ ++S LG GT+ SV S SS F + I W PT+ Q PH + G
Sbjct: 231 YSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGDG 290
Query: 362 SGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 505
E+ I++ F+S A + ++PLS P+AP+ +EF + I+
Sbjct: 291 QFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[19][TOP]
>UniRef100_A0A9J7 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J7_ARMV
Length = 1084
Score = 56.2 bits (134), Expect = 2e-06
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 80 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 259
+ + P + L T +A L +++ + Y+Y +LS++LGVGG V+ VH S
Sbjct: 761 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGVGGVVKGKVHICS 820
Query: 260 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------AN 406
LR++ W G T Q + P C I E G+ E++I+SP++ T A+
Sbjct: 821 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 880
Query: 407 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 529
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 881 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 918
[20][TOP]
>UniRef100_B1A9X8 Polyprotein P2 (Fragment) n=1 Tax=Arabis mosaic virus
RepID=B1A9X8_ARMV
Length = 521
Score = 55.5 bits (132), Expect = 3e-06
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Frame = +2
Query: 80 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 259
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 198 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGTHKVYNYNNTLLSYYLGIGGVVKGKVHICS 257
Query: 260 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------AN 406
LR++ W G T Q + P C I E G+ E++I+SP++ T A+
Sbjct: 258 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDAQSAS 317
Query: 407 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 529
+ F+ I S P+AP ++ ++I+ I + PDL
Sbjct: 318 SFTSTLNFYAI--SGPIAPSGETARMPVVVQINEI-ALPDL 355
[21][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 55.5 bits (132), Expect = 3e-06
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +2
Query: 185 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 358
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWECEAPPTLRQVLWGPHQIMHGD 289
Query: 359 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 505
G E+ I++ +S A + ++PLS P+AP+ +EF + I+
Sbjct: 290 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIN 338
[22][TOP]
>UniRef100_UPI00003FE532 capsid protein n=1 Tax=Arabis mosaic virus RepID=UPI00003FE532
Length = 505
Score = 55.1 bits (131), Expect = 4e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 80 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 259
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 182 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 241
Query: 260 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------AN 406
LR++ W G T Q + P C I E G+ E++I+SP++ T A+
Sbjct: 242 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 301
Query: 407 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 529
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 302 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 339
[23][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +2
Query: 185 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 358
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 228 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 287
Query: 359 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 502
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 288 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 335
[24][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 55.1 bits (131), Expect = 4e-06
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +2
Query: 185 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 358
SY+ ++S LG GT+ SV S SS F + I W PT+ Q PH +
Sbjct: 816 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQIMHGD 875
Query: 359 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 502
G E+ I++ +S A + ++PLS P+AP+ +EF + I
Sbjct: 876 GQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 923
[25][TOP]
>UniRef100_Q91HK4 Coat protein n=1 Tax=Arabis mosaic virus strain NW RepID=POL2_ARMVN
Length = 1110
Score = 55.1 bits (131), Expect = 4e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 80 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 259
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 787 LTIPPLEYDLSTTSAYKSVSLLLGQTLIDGTHKVYNYNNTLLSYYLGIGGVVKGRVHICS 846
Query: 260 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------AN 406
LR++ W G T Q + P C I E G+ E++I+SP++ T A+
Sbjct: 847 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIGEDGNFEIEIRSPYHRTPLRLLDAQAAS 906
Query: 407 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 529
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 907 AFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 944
[26][TOP]
>UniRef100_A0A9J8 Polyprotein P2 119kDa n=1 Tax=Arabis mosaic virus RepID=A0A9J8_ARMV
Length = 1083
Score = 54.7 bits (130), Expect = 5e-06
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 11/161 (6%)
Frame = +2
Query: 80 MVLSPTQLALGTHAATALPLTLAEKSVTTSGIETYSYAMGILSHFLGVGGTVRFSVHSTS 259
+ + P + L T +A L +++ + Y+Y +LS++LG+GG V+ VH S
Sbjct: 760 LTIPPLEYDLSTTSAYKSVSLLLGQTLVDGIHKVYNYNNTLLSYYLGIGGVVKGRVHICS 819
Query: 260 SKFVSCKLRIII-W-GTTPTIAQTGQMPHCDIVEGGSGELKIQSPFYST---------AN 406
LR++ W G T Q + P C I E G+ E++I+SP++ T A+
Sbjct: 820 PCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIDEDGNFEIEIRSPYHRTPLRLLDGQAAS 879
Query: 407 FGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDL 529
+ F+ I S P+AP +K ++I I + PDL
Sbjct: 880 SFTSTLNFYAI--SGPIAPSGETAKMPVVVQIDEI-ALPDL 917
[27][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 54.3 bits (129), Expect = 7e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 185 SYAMGILSHFLGVGGTVRFSVHSTSSKFVSCKLRIIIWG--TTPTIAQTGQMPHCDIVEG 358
SY+ ++S LG GT+ SV S SS F + I W T PT+ Q PH +
Sbjct: 230 SYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWGPHQIMHGD 289
Query: 359 GSGELKIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRI 502
G E+ ++ +S++ + ++PLS P+AP+ +EF + I
Sbjct: 290 GQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHI 337