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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 216 bits (551), Expect = 8e-55
Identities = 99/137 (72%), Positives = 118/137 (86%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG G+G LPTK WV+ FG+
Sbjct: 579 HFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRP 638
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
S+LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ ++L Q+DALVHYR
Sbjct: 639 SQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYR 698
Query: 363 NCIPESTTGLEQHYCQP 413
N IPEST+GLEQ++ P
Sbjct: 699 NVIPESTSGLEQYFDAP 715
Score = 96.3 bits (238), Expect = 2e-18
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGS 577
LPTK WV+ FG+ S+LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+
Sbjct: 626 LPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGT 683
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 216 bits (551), Expect = 8e-55
Identities = 99/137 (72%), Positives = 118/137 (86%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HFYT +LGV GPHYKP E DFIVSTEPLKMG+ GEHVPI+YG G+G LPTK WV+ FG+
Sbjct: 2019 HFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLDFGRP 2078
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
S+LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ ++L Q+DALVHYR
Sbjct: 2079 SQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDALVHYR 2138
Query: 363 NCIPESTTGLEQHYCQP 413
N IPEST+GLEQ++ P
Sbjct: 2139 NVIPESTSGLEQYFDAP 2155
Score = 96.3 bits (238), Expect = 2e-18
Identities = 43/58 (74%), Positives = 52/58 (89%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGS 577
LPTK WV+ FG+ S+LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+
Sbjct: 2066 LPTKKWVLDFGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGT 2123
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 203 bits (517), Expect = 7e-51
Identities = 98/137 (71%), Positives = 114/137 (83%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HFYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G GIG LPTK WV FGK
Sbjct: 579 HFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKP 638
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
S+LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA ++L Q+DAL HYR
Sbjct: 639 SQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYR 698
Query: 363 NCIPESTTGLEQHYCQP 413
N IPEST+GLEQ++ P
Sbjct: 699 NVIPESTSGLEQYFDAP 715
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGS 577
LPTK WV FGK S+LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGS
Sbjct: 626 LPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGS 683
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 203 bits (517), Expect = 7e-51
Identities = 98/137 (71%), Positives = 114/137 (83%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HFYT +LGV GPHYKP E DFIVS +PLK G+ GE+VPI +G GIG LPTK WV FGK
Sbjct: 2021 HFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGDFGKP 2080
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
S+LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA ++L Q+DAL HYR
Sbjct: 2081 SQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYR 2140
Query: 363 NCIPESTTGLEQHYCQP 413
N IPEST+GLEQ++ P
Sbjct: 2141 NVIPESTSGLEQYFDAP 2157
Score = 95.9 bits (237), Expect = 2e-18
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGS 577
LPTK WV FGK S+LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGS
Sbjct: 2068 LPTKKWVGDFGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGS 2125
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 176 bits (445), Expect = 2e-42
Identities = 83/137 (60%), Positives = 103/137 (75%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HFYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGG+G LPT WV +FG+
Sbjct: 578 HFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRP 636
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
S+LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ ++L ++ L HYR
Sbjct: 637 SQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYR 696
Query: 363 NCIPESTTGLEQHYCQP 413
N IPES GL ++ P
Sbjct: 697 NSIPESVDGLTGYFDAP 713
Score = 80.9 bits (198), Expect = 7e-14
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGS 577
LPT WV +FG+ S+LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS
Sbjct: 624 LPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGS 681
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 176 bits (445), Expect = 2e-42
Identities = 83/137 (60%), Positives = 103/137 (75%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HFYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGG+G LPT WV +FG+
Sbjct: 2004 HFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKNFGRP 2062
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
S+LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ ++L ++ L HYR
Sbjct: 2063 SQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPLCHYR 2122
Query: 363 NCIPESTTGLEQHYCQP 413
N IPES GL ++ P
Sbjct: 2123 NSIPESVDGLTGYFDAP 2139
Score = 80.9 bits (198), Expect = 7e-14
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGS 577
LPT WV +FG+ S+LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS
Sbjct: 2050 LPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGS 2107
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 134 bits (336), Expect = 7e-30
Identities = 69/134 (51%), Positives = 89/134 (66%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HF L V GP YKP + +VST PLK G G VP++ G GIG LPT +WV F +
Sbjct: 586 HFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRP 645
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
++L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A +LL + AL YR
Sbjct: 646 TQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYR 705
Query: 363 NCIPESTTGLEQHY 404
N IPEST GLEQ++
Sbjct: 706 NVIPESTYGLEQYF 719
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFG 574
LPT +WV F + ++L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG
Sbjct: 633 LPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFG 689
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 134 bits (336), Expect = 7e-30
Identities = 69/134 (51%), Positives = 89/134 (66%)
Frame = +3
Query: 3 HFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGILGEHVPIKYGGGIGRLPTKSWVMSFGKS 182
HF L V GP YKP + +VST PLK G G VP++ G GIG LPT +WV F +
Sbjct: 2076 HFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRP 2135
Query: 183 SKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYR 362
++L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A +LL + AL YR
Sbjct: 2136 TQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYR 2195
Query: 363 NCIPESTTGLEQHY 404
N IPEST GLEQ++
Sbjct: 2196 NVIPESTYGLEQYF 2209
Score = 61.2 bits (147), Expect = 5e-08
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +2
Query: 404 LPTKSWVMSFGKSSKLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFG 574
LPT +WV F + ++L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG
Sbjct: 2123 LPTIAWVHRFMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFG 2179
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 78.6 bits (192), Expect = 3e-13
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
Frame = +3
Query: 21 LGVCGPHY--KPCEEDFIVSTEPLKMG--ILGEHVPIKYGGGIGRLPTKSWVMSFGKSSK 188
+ V GP + + C++ F+VST PL G H+P++ G G+GR+P++ WV F +
Sbjct: 1766 IAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRF---RR 1822
Query: 189 LKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATELLNQRDALVHYRNC 368
+++ + +IY + AGK IIF APY+A A I+F A + + RD L Y N
Sbjct: 1823 IRHVQIRVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACAQQ-YSYRDMLNRYNNV 1877
Query: 369 IPESTTGLEQHYCQPRA 419
+++G+EQ++ + A
Sbjct: 1878 CTPNSSGIEQYFAKDMA 1894
[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=UPI0000163DCE
Length = 707
Score = 55.5 bits (132), Expect = 3e-06
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +3
Query: 27 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGIGRLPTKSWVMSFGKSSKL 191
+CGP + E F+VST PL+ G H I+Y G+GRLP++ WV F S+
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622
Query: 192 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAF 311
A+ +R+ +GK I F PYVAN A I F
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGF 655
[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=POL1_BRAV
Length = 2094
Score = 55.5 bits (132), Expect = 3e-06
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Frame = +3
Query: 27 VCGPHY--KPCEEDFIVSTEPLKMGILGE--HVPIKYG-GGIGRLPTKSWVMSFGKSSKL 191
+CGP + E F+VST PL+ G H I+Y G+GRLP++ WV F S+
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009
Query: 192 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAF 311
A+ +R+ +GK I F PYVAN A I F
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGF 2042