[UP]
[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
RepID=UPI0000163E03
Length = 824
Score = 298 bits (763), Expect = 2e-79
Identities = 142/192 (73%), Positives = 162/192 (84%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
GNKAHFYT +LGV GPHYKP E DFIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+
Sbjct: 575 GNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLD 634
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ K+L Q+DAL
Sbjct: 635 FGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDAL 694
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
VHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE PTL+
Sbjct: 695 VHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLI 753
Query: 542 LNRAAKDGNVPC 577
LN AAKD VPC
Sbjct: 754 LNEAAKDRKVPC 765
[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
RepID=POL1_BRSV
Length = 2264
Score = 298 bits (763), Expect = 2e-79
Identities = 142/192 (73%), Positives = 162/192 (84%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
GNKAHFYT +LGV GPHYKP E DFIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+
Sbjct: 2015 GNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLD 2074
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
FG+ S LKN GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+ K+L Q+DAL
Sbjct: 2075 FGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDAL 2134
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
VHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE PTL+
Sbjct: 2135 VHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLI 2193
Query: 542 LNRAAKDGNVPC 577
LN AAKD VPC
Sbjct: 2194 LNEAAKDRKVPC 2205
[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
Length = 824
Score = 285 bits (729), Expect = 2e-75
Identities = 142/192 (73%), Positives = 160/192 (83%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
GNKAHFYT +LGV GPHYKP E DFIVS +PLK GV GE+VPI +G GIG LPTK WV +
Sbjct: 575 GNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGD 634
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
FGK S LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL
Sbjct: 635 FGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDAL 694
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE LPT +
Sbjct: 695 AHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAI 753
Query: 542 LNRAAKDGNVPC 577
LN+AAKD VPC
Sbjct: 754 LNQAAKDRKVPC 765
[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
RepID=POL1_TBRVM
Length = 2266
Score = 285 bits (729), Expect = 2e-75
Identities = 142/192 (73%), Positives = 160/192 (83%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
GNKAHFYT +LGV GPHYKP E DFIVS +PLK GV GE+VPI +G GIG LPTK WV +
Sbjct: 2017 GNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGD 2076
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
FGK S LKN+KGYLI LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL
Sbjct: 2077 FGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDAL 2136
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE LPT +
Sbjct: 2137 AHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAI 2195
Query: 542 LNRAAKDGNVPC 577
LN+AAKD VPC
Sbjct: 2196 LNQAAKDRKVPC 2207
[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI00017F0C90
Length = 826
Score = 238 bits (608), Expect = 2e-61
Identities = 115/192 (59%), Positives = 139/192 (72%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGG+G LPT WV N
Sbjct: 574 GDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKN 632
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++ L
Sbjct: 633 FGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPL 692
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
HYRN IPES GL YFDAP+P A +G+ YF +GETYAAL +FK +VL +
Sbjct: 693 CHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQI 752
Query: 542 LNRAAKDGNVPC 577
LN A + G VPC
Sbjct: 753 LNGAVRQGKVPC 764
[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
RepID=POL1_GCMV
Length = 2252
Score = 238 bits (608), Expect = 2e-61
Identities = 115/192 (59%), Positives = 139/192 (72%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G G H+PIK GGG+G LPT WV N
Sbjct: 2000 GDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKN 2058
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
FG+ S LKN GY Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++ L
Sbjct: 2059 FGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPL 2118
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
HYRN IPES GL YFDAP+P A +G+ YF +GETYAAL +FK +VL +
Sbjct: 2119 CHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQI 2178
Query: 542 LNRAAKDGNVPC 577
LN A + G VPC
Sbjct: 2179 LNGAVRQGKVPC 2190
[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=UPI00003FE52F
Length = 846
Score = 167 bits (422), Expect = 7e-40
Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
GN+ HF L V GP YKP + +VST PLK G G VP++ G GIG LPT WV
Sbjct: 582 GNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHR 641
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
F + + L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A KLL + AL
Sbjct: 642 FMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTAL 701
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGYEKE 526
YRN IPEST GLEQYFDA IPQA++ G FY + E+ + L + K V+G E
Sbjct: 702 NLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTE 757
[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
RepID=POL1_CNSV
Length = 2336
Score = 167 bits (422), Expect = 7e-40
Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Frame = +2
Query: 2 GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
GN+ HF L V GP YKP + +VST PLK G G VP++ G GIG LPT WV
Sbjct: 2072 GNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHR 2131
Query: 182 FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
F + + L +A GY I+ +R +E+GK ++F S APYVA NAAL+AFG A KLL + AL
Sbjct: 2132 FMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTAL 2191
Query: 362 VHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGYEKE 526
YRN IPEST GLEQYFDA IPQA++ G FY + E+ + L + K V+G E
Sbjct: 2192 NLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTE 2247
[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID54_9SECO
Length = 1916
Score = 79.7 bits (195), Expect = 1e-13
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
Frame = +2
Query: 32 LGVCGPHY--KPCEEDFIVSTEPLKMG--VLGEHVPIKYGGGIGRLPTKNWVLNFGKSSS 199
+ V GP + + C++ F+VST PL G H+P++ G G+GR+P+++WV F +
Sbjct: 1766 IAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR--- 1822
Query: 200 LKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNC 379
+++ + +IY + AGK IIF APY+A A I+F A + + RD L Y N
Sbjct: 1823 IRHVQIRVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACAQQ-YSYRDMLNRYNNV 1877
Query: 380 IPESTTGLEQYF 415
+++G+EQYF
Sbjct: 1878 CTPNSSGIEQYF 1889
[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=UPI0000163DCE
Length = 707
Score = 57.4 bits (137), Expect = 8e-07
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 38 VCGPHY--KPCEEDFIVSTEPLKMGVLGE--HVPIKYG-GGIGRLPTKNWVLNFGKSSSL 202
+CGP + E F+VST PL+ G H I+Y G+GRLP+++WV F S+
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622
Query: 203 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI 382
A+ +R+ +GK I F PYVAN A I F Y++ I
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667
Query: 383 PESTTGLEQYFDAPIPQANVGQFYF 457
Y D +P ++ FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685
[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
RepID=POL1_BRAV
Length = 2094
Score = 57.4 bits (137), Expect = 8e-07
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
Frame = +2
Query: 38 VCGPHY--KPCEEDFIVSTEPLKMGVLGE--HVPIKYG-GGIGRLPTKNWVLNFGKSSSL 202
+CGP + E F+VST PL+ G H I+Y G+GRLP+++WV F S+
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009
Query: 203 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI 382
A+ +R+ +GK I F PYVAN A I F Y++ I
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054
Query: 383 PESTTGLEQYFDAPIPQANVGQFYF 457
Y D +P ++ FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072