BB903404 ( RCE01184 )

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[1][TOP]
>UniRef100_UPI0000163E03 RNA-dependent RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=UPI0000163E03
          Length = 824

 Score =  298 bits (763), Expect = 2e-79
 Identities = 142/192 (73%), Positives = 162/192 (84%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            GNKAHFYT +LGV GPHYKP E DFIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+
Sbjct: 575  GNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLD 634

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            FG+ S LKN  GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+  K+L Q+DAL
Sbjct: 635  FGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDAL 694

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
            VHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE   PTL+
Sbjct: 695  VHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLI 753

Query: 542  LNRAAKDGNVPC 577
            LN AAKD  VPC
Sbjct: 754  LNEAAKDRKVPC 765

[2][TOP]
>UniRef100_P18522 RNA-directed RNA polymerase n=1 Tax=Beet ringspot virus
            RepID=POL1_BRSV
          Length = 2264

 Score =  298 bits (763), Expect = 2e-79
 Identities = 142/192 (73%), Positives = 162/192 (84%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            GNKAHFYT +LGV GPHYKP E DFIVSTEPLKMGV GEHVPI+YG G+G LPTK WVL+
Sbjct: 2015 GNKAHFYTEMLGVAGPHYKPQENDFIVSTEPLKMGVCGEHVPIQYGSGVGGLPTKKWVLD 2074

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            FG+ S LKN  GYLI+P+LR Q+EAGKR++FMSPAPYVANNAALIAFG+  K+L Q+DAL
Sbjct: 2075 FGRPSQLKNKLGYLIHPILRAQIEAGKRLVFMSPAPYVANNAALIAFGTGGKMLIQKDAL 2134

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
            VHYRN IPEST+GLEQYFDAP+P A +G FYF +GETYAAL ++KE KVL YE   PTL+
Sbjct: 2135 VHYRNVIPESTSGLEQYFDAPLPTATIGTFYFANGETYAALCEYKEGKVLNYE-GFPTLI 2193

Query: 542  LNRAAKDGNVPC 577
            LN AAKD  VPC
Sbjct: 2194 LNEAAKDRKVPC 2205

[3][TOP]
>UniRef100_UPI000034ED08 Pol n=1 Tax=Tomato black ring virus RepID=UPI000034ED08
          Length = 824

 Score =  285 bits (729), Expect = 2e-75
 Identities = 142/192 (73%), Positives = 160/192 (83%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            GNKAHFYT +LGV GPHYKP E DFIVS +PLK GV GE+VPI +G GIG LPTK WV +
Sbjct: 575  GNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGD 634

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            FGK S LKN+KGYLI  LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL
Sbjct: 635  FGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDAL 694

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
             HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE  LPT +
Sbjct: 695  AHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAI 753

Query: 542  LNRAAKDGNVPC 577
            LN+AAKD  VPC
Sbjct: 754  LNQAAKDRKVPC 765

[4][TOP]
>UniRef100_Q8B8X3 RNA-directed RNA polymerase n=2 Tax=Tomato black ring virus
            RepID=POL1_TBRVM
          Length = 2266

 Score =  285 bits (729), Expect = 2e-75
 Identities = 142/192 (73%), Positives = 160/192 (83%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            GNKAHFYT +LGV GPHYKP E DFIVS +PLK GV GE+VPI +G GIG LPTK WV +
Sbjct: 2017 GNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKPGVQGEYVPIVFGEGIGGLPTKKWVGD 2076

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            FGK S LKN+KGYLI  LLREQ+EAGKR+IFM PAPYVANNAALI+FGSA K+L Q+DAL
Sbjct: 2077 FGKPSQLKNSKGYLITGLLREQIEAGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDAL 2136

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
             HYRN IPEST+GLEQYFDAPIPQA+VG FYF DGETY AL ++K+ KVL YE  LPT +
Sbjct: 2137 AHYRNVIPESTSGLEQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYE-GLPTAI 2195

Query: 542  LNRAAKDGNVPC 577
            LN+AAKD  VPC
Sbjct: 2196 LNQAAKDRKVPC 2207

[5][TOP]
>UniRef100_UPI00017F0C90 RNA-dependent RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=UPI00017F0C90
          Length = 826

 Score =  238 bits (608), Expect = 2e-61
 Identities = 115/192 (59%), Positives = 139/192 (72%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G  G H+PIK GGG+G LPT  WV N
Sbjct: 574  GDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKN 632

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            FG+ S LKN  GY  Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++  L
Sbjct: 633  FGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPL 692

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
             HYRN IPES  GL  YFDAP+P A +G+ YF +GETYAAL +FK  +VL         +
Sbjct: 693  CHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQI 752

Query: 542  LNRAAKDGNVPC 577
            LN A + G VPC
Sbjct: 753  LNGAVRQGKVPC 764

[6][TOP]
>UniRef100_P13025 RNA-directed RNA polymerase n=1 Tax=Grapevine chrome mosaic virus
            RepID=POL1_GCMV
          Length = 2252

 Score =  238 bits (608), Expect = 2e-61
 Identities = 115/192 (59%), Positives = 139/192 (72%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            G+KAHFYT +LGVCGPHYKP E+DF+VST P+K G  G H+PIK GGG+G LPT  WV N
Sbjct: 2000 GDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGE-GVHIPIKIGGGVGGLPTHQWVKN 2058

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            FG+ S LKN  GY  Y LL EQ+E GKR++FMS APYVA NAALI+FGS+ K+L ++  L
Sbjct: 2059 FGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNAALISFGSSRKILKEQMPL 2118

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANVGQFYFVDGETYAALNDFKEAKVLGYEKELPTLM 541
             HYRN IPES  GL  YFDAP+P A +G+ YF +GETYAAL +FK  +VL         +
Sbjct: 2119 CHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALCEFKNGEVLDIVGPTNVQI 2178

Query: 542  LNRAAKDGNVPC 577
            LN A + G VPC
Sbjct: 2179 LNGAVRQGKVPC 2190

[7][TOP]
>UniRef100_UPI00003FE52F RNA-dependent RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=UPI00003FE52F
          Length = 846

 Score =  167 bits (422), Expect = 7e-40
 Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            GN+ HF    L V GP YKP  +  +VST PLK G  G  VP++ G GIG LPT  WV  
Sbjct: 582  GNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHR 641

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            F + + L +A GY I+  +R  +E+GK ++F S APYVA NAAL+AFG A KLL  + AL
Sbjct: 642  FMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTAL 701

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGYEKE 526
              YRN IPEST GLEQYFDA IPQA++ G FY  + E+ + L + K   V+G   E
Sbjct: 702  NLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTE 757

[8][TOP]
>UniRef100_Q8QVV0 RNA-directed RNA polymerase n=1 Tax=Cycas necrotic stunt virus
            RepID=POL1_CNSV
          Length = 2336

 Score =  167 bits (422), Expect = 7e-40
 Identities = 89/176 (50%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
 Frame = +2

Query: 2    GNKAHFYTSVLGVCGPHYKPCEEDFIVSTEPLKMGVLGEHVPIKYGGGIGRLPTKNWVLN 181
            GN+ HF    L V GP YKP  +  +VST PLK G  G  VP++ G GIG LPT  WV  
Sbjct: 2072 GNQVHFTRQCLVVAGPFYKPTPDQLLVSTTPLKQGESGYWVPVETGMGIGNLPTIAWVHR 2131

Query: 182  FGKSSSLKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDAL 361
            F + + L +A GY I+  +R  +E+GK ++F S APYVA NAAL+AFG A KLL  + AL
Sbjct: 2132 FMRPTQLVDAYGYKIWGNVRSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTAL 2191

Query: 362  VHYRNCIPESTTGLEQYFDAPIPQANV-GQFYFVDGETYAALNDFKEAKVLGYEKE 526
              YRN IPEST GLEQYFDA IPQA++ G FY  + E+ + L + K   V+G   E
Sbjct: 2192 NLYRNVIPESTYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTE 2247

[9][TOP]
>UniRef100_A2ID54 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
            RepID=A2ID54_9SECO
          Length = 1916

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 4/132 (3%)
 Frame = +2

Query: 32   LGVCGPHY--KPCEEDFIVSTEPLKMG--VLGEHVPIKYGGGIGRLPTKNWVLNFGKSSS 199
            + V GP +  + C++ F+VST PL       G H+P++ G G+GR+P+++WV  F +   
Sbjct: 1766 IAVSGPKWIIESCDKQFVVSTLPLSRAEKFSGIHIPVECGDGLGRMPSQDWVRRFRR--- 1822

Query: 200  LKNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNC 379
            +++ +  +IY    +   AGK IIF   APY+A   A I+F  A +  + RD L  Y N 
Sbjct: 1823 IRHVQIRVIY----DAYAAGKTIIFKDVAPYIAGWTAAISFACAQQ-YSYRDMLNRYNNV 1877

Query: 380  IPESTTGLEQYF 415
               +++G+EQYF
Sbjct: 1878 CTPNSSGIEQYF 1889

[10][TOP]
>UniRef100_UPI0000163DCE RNA-dependent RNA polymerase n=1 Tax=Blackcurrant reversion virus
           RepID=UPI0000163DCE
          Length = 707

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
 Frame = +2

Query: 38  VCGPHY--KPCEEDFIVSTEPLKMGVLGE--HVPIKYG-GGIGRLPTKNWVLNFGKSSSL 202
           +CGP +     E  F+VST PL+    G   H  I+Y   G+GRLP+++WV  F  S+  
Sbjct: 563 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 622

Query: 203 KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI 382
             A+       +R+   +GK I F    PYVAN  A I F               Y++ I
Sbjct: 623 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 667

Query: 383 PESTTGLEQYFDAPIPQANVGQFYF 457
                    Y D  +P ++   FYF
Sbjct: 668 -------NLYHDVSVPGSDALYFYF 685

[11][TOP]
>UniRef100_Q8V5E0 RNA-directed RNA polymerase n=1 Tax=Blackcurrant reversion virus
            RepID=POL1_BRAV
          Length = 2094

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 5/145 (3%)
 Frame = +2

Query: 38   VCGPHY--KPCEEDFIVSTEPLKMGVLGE--HVPIKYG-GGIGRLPTKNWVLNFGKSSSL 202
            +CGP +     E  F+VST PL+    G   H  I+Y   G+GRLP+++WV  F  S+  
Sbjct: 1950 ICGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWVTKFKSSAHR 2009

Query: 203  KNAKGYLIYPLLREQLEAGKRIIFMSPAPYVANNAALIAFGSATKLLNQRDALVHYRNCI 382
              A+       +R+   +GK I F    PYVAN  A I F               Y++ I
Sbjct: 2010 VTAE-------IRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLG--------YDYKSMI 2054

Query: 383  PESTTGLEQYFDAPIPQANVGQFYF 457
                     Y D  +P ++   FYF
Sbjct: 2055 -------NLYHDVSVPGSDALYFYF 2072