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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 237 bits (605), Expect = 4e-61
Identities = 111/192 (57%), Positives = 139/192 (72%), Gaps = 3/192 (1%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQR 185
IQ+ +TANFG GA+FW++PLS+P AP+ VE+KFEFYIRI GID PDLC+QINY+QR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343
Query: 186 FGWFMVRP-EGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFT 362
FGWFM+ P + T E +PSR+ N+ +K +C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403
Query: 363 WAWKHDTEASKMKGNLSFGTGMGTKDVHH--GETRVFSIYDNSYSIPFEFGSFAGPVTSG 536
W+W +TEA K +S + H R +YDN+YSIPFEFGSFAGPV SG
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILGIRGILVYDNAYSIPFEFGSFAGPVISG 463
Query: 537 GKPFEAENWIKI 572
G P EAENW+++
Sbjct: 464 GTPNEAENWVRV 475
[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 233 bits (594), Expect = 8e-60
Identities = 110/195 (56%), Positives = 142/195 (72%), Gaps = 5/195 (2%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
KIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY Q
Sbjct: 285 KIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQ 344
Query: 183 RFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 353
RF WF ++RP K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI+
Sbjct: 345 RFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCIL 404
Query: 354 HFTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 527
HF+W T ++G++SF +GMG + HHGE + +S ++PFEFGSFAGPV
Sbjct: 405 HFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGPV 464
Query: 528 TSGGKPFEAENWIKI 572
TSGG PF +ENW+++
Sbjct: 465 TSGGTPFTSENWLRV 479
[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 233 bits (594), Expect = 8e-60
Identities = 110/195 (56%), Positives = 142/195 (72%), Gaps = 5/195 (2%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
KIQSPFY+TANFG GA+FWV P+SSPMAPE +ESK E+YI+I GID+ P +C+QINY Q
Sbjct: 1095 KIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGIDADPPMCRQINYDQ 1154
Query: 183 RFGWF-MVRPEG--TDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 353
RF WF ++RP K ++ +PSRV N+ K TN+VNAFAIMCATTGMH GKCI+
Sbjct: 1155 RFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAIMCATTGMHAGKCIL 1214
Query: 354 HFTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPV 527
HF+W T ++G++SF +GMG + HHGE + +S ++PFEFGSFAGPV
Sbjct: 1215 HFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSSLAVPFEFGSFAGPV 1274
Query: 528 TSGGKPFEAENWIKI 572
TSGG PF +ENW+++
Sbjct: 1275 TSGGTPFTSENWLRV 1289
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 218 bits (554), Expect = 3e-55
Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 2/192 (1%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INY+Q
Sbjct: 284 QIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQ 343
Query: 183 RFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVH 356
RF W ++ K ++ +PSR+ NL K V+ TNFVNA AI+CATTGMH G C +H
Sbjct: 344 RFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTIH 403
Query: 357 FTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSG 536
F+W W H E K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TSG
Sbjct: 404 FSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITSG 462
Query: 537 GKPFEAENWIKI 572
GK EAENWI+I
Sbjct: 463 GKADEAENWIEI 474
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 218 bits (554), Expect = 3e-55
Identities = 102/192 (53%), Positives = 136/192 (70%), Gaps = 2/192 (1%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
+IQSPF+STANFG+ G+ F+V L +PMAPE VE+ E+YI+I GI++ P LC++INY+Q
Sbjct: 1121 QIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQIKGIEANPGLCREINYKQ 1180
Query: 183 RFGWFMVRPEGTDK--EFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVH 356
RF W ++ K ++ +PSR+ NL K V+ TNFVNA AI+CATTGMH G C +H
Sbjct: 1181 RFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNALAILCATTGMHHGNCTIH 1240
Query: 357 FTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSG 536
F+W W H E K G L F GMG + H G+T ++ N++S+PF+FGSFAGP+TSG
Sbjct: 1241 FSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSNTHSVPFQFGSFAGPITSG 1299
Query: 537 GKPFEAENWIKI 572
GK EAENWI+I
Sbjct: 1300 GKADEAENWIEI 1311
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 201 bits (511), Expect = 3e-50
Identities = 94/194 (48%), Positives = 132/194 (68%), Gaps = 4/194 (2%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI+++ LC++INY Q
Sbjct: 1117 QIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIHIHGINAKAHLCREINYNQ 1176
Query: 183 RFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVH 356
F WFM+ T + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +H
Sbjct: 1177 HFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNALAIMCATTGMHFGKCTLH 1236
Query: 357 FTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVT 530
F+W W + + + G +S TGMG V H G F S+S+PF+FGSFAGP++
Sbjct: 1237 FSWGW-YRGKLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYPATSFSLPFQFGSFAGPIS 1295
Query: 531 SGGKPFEAENWIKI 572
GG P AENWI++
Sbjct: 1296 CGGAPMAAENWIEL 1309
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 199 bits (505), Expect = 2e-49
Identities = 93/194 (47%), Positives = 131/194 (67%), Gaps = 4/194 (2%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q
Sbjct: 284 QIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQ 343
Query: 183 RFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVH 356
F WFM+ T + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +H
Sbjct: 344 HFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTLH 403
Query: 357 FTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVT 530
F+W W A + G S TGMG V H G F+ ++S+PF+FGSFAGP++
Sbjct: 404 FSWNWFRGKLADQ-SGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPIS 462
Query: 531 SGGKPFEAENWIKI 572
GG+P AENW+++
Sbjct: 463 CGGEPMAAENWVRL 476
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 199 bits (505), Expect = 2e-49
Identities = 93/194 (47%), Positives = 131/194 (67%), Gaps = 4/194 (2%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
+IQSPF++TANFG +G F++ L +P+APE +E+ F++YI IHGI + +LC++INY Q
Sbjct: 1116 QIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIHIHGIKVKANLCREINYNQ 1175
Query: 183 RFGWFMVR--PEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVH 356
F WFM+ T + +P+R++NL K V+ TNFVNA AIMCATTGMH+GKC +H
Sbjct: 1176 HFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNALAIMCATTGMHFGKCTLH 1235
Query: 357 FTWAWKHDTEASKMKGNLSFGTGMGTKDV--HHGETRVFSIYDNSYSIPFEFGSFAGPVT 530
F+W W A + G S TGMG V H G F+ ++S+PF+FGSFAGP++
Sbjct: 1236 FSWNWFRGKLADQ-SGVFSIQTGMGKSTVAEHFGGRHSFNYPATNFSLPFQFGSFAGPIS 1294
Query: 531 SGGKPFEAENWIKI 572
GG+P AENW+++
Sbjct: 1295 CGGEPMAAENWVRL 1308
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 196 bits (497), Expect = 1e-48
Identities = 100/192 (52%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
KIQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INY+Q
Sbjct: 109 KIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQ 168
Query: 183 RFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGK-CIVH 356
FGWF +VR T+KE + +PSR++N+ K E N VNAF+IMCATTGM WG +H
Sbjct: 169 AFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWGSPFALH 228
Query: 357 FTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSG 536
H T+A K S G+ T+ H G+ ++ + S IPFE GSFAGPVTSG
Sbjct: 229 LD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFAGPVTSG 283
Query: 537 GKPFEAENWIKI 572
G PFE+ENWI++
Sbjct: 284 GTPFESENWIRV 295
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 196 bits (497), Expect = 1e-48
Identities = 100/192 (52%), Positives = 128/192 (66%), Gaps = 2/192 (1%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQ 182
KIQSPFY+TAN G A FWV P+SSPMAPE +ES E+YI+I GI++ LC+ INY+Q
Sbjct: 1129 KIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQILGIEADTPLCRAINYKQ 1188
Query: 183 RFGWF-MVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGK-CIVH 356
FGWF +VR T+KE + +PSR++N+ K E N VNAF+IMCATTGM WG +H
Sbjct: 1189 AFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAFSIMCATTGMQWGSPFALH 1248
Query: 357 FTWAWKHDTEASKMKGNLSFGTGMGTKDVHHGETRVFSIYDNSYSIPFEFGSFAGPVTSG 536
H T+A K S G+ T+ H G+ ++ + S IPFE GSFAGPVTSG
Sbjct: 1249 LD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLATSQVIPFEIGSFAGPVTSG 1303
Query: 537 GKPFEAENWIKI 572
G PFE+ENWI++
Sbjct: 1304 GTPFESENWIRV 1315
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 125 bits (315), Expect = 2e-27
Identities = 62/190 (32%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQR 185
I+ FY+++ +G GA + L SPM+P +++ F+ +I G +C+ IN+ QR
Sbjct: 297 IKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTPDAPMCRTINFTQR 356
Query: 186 FGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTW 365
FGWF V P + ++ + ++L + ++ T + NAF MC T+ MH+G I+HF+W
Sbjct: 357 FGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSW 416
Query: 366 A-WKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGG 539
+ T A+ G ++ G G ++ + G R FSIY+ ++P E G+FAGP
Sbjct: 417 TLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPLELGTFAGPTPLKK 476
Query: 540 KPFEAENWIK 569
F+ NWI+
Sbjct: 477 LDFKYRNWIR 486
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 124 bits (310), Expect = 7e-27
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQR 185
I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+ IN+ QR
Sbjct: 285 IKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQR 344
Query: 186 FGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTW 365
FGWF V P + ++ + ++L + ++ T + NAF MC T+ MH+G I+HF+W
Sbjct: 345 FGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSW 404
Query: 366 A-WKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGG 539
+ T A+ G ++ G G ++ + G R SIY+ ++P E G+FAGP
Sbjct: 405 TLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFAGPTPLKK 464
Query: 540 KPFEAENWIK 569
F+ NWI+
Sbjct: 465 LDFKYRNWIR 474
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 124 bits (310), Expect = 7e-27
Identities = 62/190 (32%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYRQR 185
I+ FY+++ +G GA V L SPM+P +++ F+ +I G +C+ IN+ QR
Sbjct: 968 IKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTPDAPMCRTINFTQR 1027
Query: 186 FGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIVHFTW 365
FGWF V P + ++ + ++L + ++ T + NAF MC T+ MH+G I+HF+W
Sbjct: 1028 FGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTSTMHFGSVIIHFSW 1087
Query: 366 A-WKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVTSGG 539
+ T A+ G ++ G G ++ + G R SIY+ ++P E G+FAGP
Sbjct: 1088 TLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPLELGTFAGPTPLKK 1147
Query: 540 KPFEAENWIK 569
F+ NWI+
Sbjct: 1148 LDFKYRNWIR 1157
[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
Length = 515
Score = 63.2 bits (152), Expect = 1e-08
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 5/194 (2%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDLCKQIN 173
I++ F+S A + ++PLS P+AP+ +EF + I+ DSQ P +
Sbjct: 296 IKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVHPPMFSSAE 355
Query: 174 YRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 353
F ++P+ +P + + K T N + + A TG H+G+ V
Sbjct: 356 LYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--V 413
Query: 354 HFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVT 530
+W +A +G++S T + G+ R++ + IP GS+AG
Sbjct: 414 DLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATP 473
Query: 531 SGGKPFEAENWIKI 572
SG +N+++I
Sbjct: 474 SGA--LGKQNYVRI 485
[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
Length = 515
Score = 60.8 bits (146), Expect = 7e-08
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 6/195 (3%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQPDLCKQINYR 179
I++ +S A + ++PLS P+AP+ +EF + I+ DSQ +
Sbjct: 296 IKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWRPDSQVH-PPMFSSS 354
Query: 180 QRFGWFM---VRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCI 350
+ + WF ++P+ +P + + K T N + + A TG H+G+
Sbjct: 355 ELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE-- 412
Query: 351 VHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPV 527
V +W +A +G++S T + G+ R++ + IP GS+AG
Sbjct: 413 VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGAT 472
Query: 528 TSGGKPFEAENWIKI 572
SG +N+++I
Sbjct: 473 PSGA--LGKQNYVRI 485
[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
Length = 515
Score = 60.1 bits (144), Expect = 1e-07
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDLCKQIN 173
I++ +S A + ++PLS P+AP+ +EF + I DSQ P +
Sbjct: 296 IKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPPMFSSAE 355
Query: 174 YRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 353
F ++P+ +P + + K T N + + A TG H+G+ V
Sbjct: 356 LYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--V 413
Query: 354 HFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVT 530
+W +A +G++S T + G+ R++ + IP GS+AG
Sbjct: 414 DLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATP 473
Query: 531 SGGKPFEAENWIKI 572
SG +N+++I
Sbjct: 474 SGA--LGKQNYVRI 485
[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
Length = 513
Score = 59.7 bits (143), Expect = 2e-07
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDLCKQIN 173
I++ +S A + ++PLS P+AP+ +EF + I DSQ P +
Sbjct: 294 IKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPPMFSSAE 353
Query: 174 YRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 353
F ++P+ +P + + K T N + + A TG H+G+ V
Sbjct: 354 LYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--V 411
Query: 354 HFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVT 530
+W +A +G++S T + G+ R++ + IP GS+AG
Sbjct: 412 DLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATP 471
Query: 531 SGGKPFEAENWIKI 572
SG +N+++I
Sbjct: 472 SGA--LGKQNYVRI 483
[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 59.7 bits (143), Expect = 2e-07
Identities = 45/194 (23%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Frame = +3
Query: 6 IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--GIDSQ--PDLCKQIN 173
I++ +S A + ++PLS P+AP+ +EF + I DSQ P +
Sbjct: 882 IKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHPPMFSSAE 941
Query: 174 YRQRFGWFMVRPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKCIV 353
F ++P+ +P + + K T N + + A TG H+G+ V
Sbjct: 942 LYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE--V 999
Query: 354 HFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGPVT 530
+W +A +G++S T + G+ R++ + IP GS+AG
Sbjct: 1000 DLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGATP 1059
Query: 531 SGGKPFEAENWIKI 572
SG +N+++I
Sbjct: 1060 SGA--LGKQNYVRI 1071
[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
RepID=Q5L492_TRSV
Length = 515
Score = 58.9 bits (141), Expect = 3e-07
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 6/196 (3%)
Frame = +3
Query: 3 KIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGI--DSQPDLCKQINY 176
++ S + FG G ++PLS P+AP+ +EF + I DSQ +
Sbjct: 299 RLHSSSTTEEGFGRLG----ILPLSGPIAPDAHVGSYEFIVHIDTWRPDSQVHP-PMFSS 353
Query: 177 RQRFGWFMV---RPEGTDKEFQMFVPSRVSNLVMKGVECTNFVNAFAIMCATTGMHWGKC 347
+ + WF + +P+ +P + + K T N + + A TG H+G+
Sbjct: 354 AELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLVAATGWHYGE- 412
Query: 348 IVHFTWAWKHDTEASKMKGNLSFGTGMGTKDVH-HGETRVFSIYDNSYSIPFEFGSFAGP 524
V +W +A +G++S T + G+ R++ + IP GS+AG
Sbjct: 413 -VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIPIFLGSYAGA 471
Query: 525 VTSGGKPFEAENWIKI 572
SG +N+++I
Sbjct: 472 TPSGA--LGKQNYVRI 485