BB903329 ( RCE01103 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  349 bits (895), Expect = 1e-94
 Identities = 165/192 (85%), Positives = 175/192 (91%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           RTL+H IK YGLPFN+  A  K++LTD  +  YI +AN FFNDYPTLLFTRNHISKR G 
Sbjct: 264 RTLVHLIKTYGLPFNMQFACPKSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGT 323

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFF
Sbjct: 324 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFF 383

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 542
           SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+
Sbjct: 384 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLY 443

Query: 543 FLHTWYNNMTFL 578
           FLHTWYNNMTFL
Sbjct: 444 FLHTWYNNMTFL 455

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  249 bits (637), Expect = 8e-65
 Identities = 121/196 (61%), Positives = 143/196 (72%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           RT +H IKE+G PF          +   D      +   F   + T+LFTRNHIS RDG 
Sbjct: 259 RTWMHHIKEHGYPF----------VPSHDALDNARQYRIFMQKHVTMLFTRNHISDRDGF 308

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCIMYGLETIRGSNRYIEQIARDY 350
           LK RPVYAVDD FI+ ELM++FPL + AR P      CIMY  ETIRGSNRY++ IARD+
Sbjct: 309 LKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCIMYSFETIRGSNRYLDSIARDF 368

Query: 351 STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMD 530
            +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQPTYEYP YPDL EH LY RM+
Sbjct: 369 ISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQPTYEYPAYPDLSEHDLYKRMN 428

Query: 531 NLLHFLHTWYNNMTFL 578
           NLLHFLHTWYNNM F+
Sbjct: 429 NLLHFLHTWYNNMVFV 444

[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  243 bits (621), Expect = 6e-63
 Identities = 113/192 (58%), Positives = 139/192 (72%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           RT++H +K++ LPFN           D D          FF   PT+LFTRNHIS RDG 
Sbjct: 258 RTIVHRLKQFALPFNP---------KDFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGN 308

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LK RPVYAVDD+F+I+E+MLTFPL + AR P CCIMYGLETIRGSN +I+  A+ + ++F
Sbjct: 309 LKQRPVYAVDDLFLILEVMLTFPLLVMARLPECCIMYGLETIRGSNHWIDSTAKRFRSYF 368

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 542
           ++DWS YDQRLPR ITD+YYTDFL SLI+IN GYQPT +Y  YPDL    ++ RM NLLH
Sbjct: 369 TIDWSQYDQRLPRCITDLYYTDFLESLIIINFGYQPTADYADYPDLTPDMMFTRMTNLLH 428

Query: 543 FLHTWYNNMTFL 578
           FLHTWYNNM ++
Sbjct: 429 FLHTWYNNMVYV 440

[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  235 bits (600), Expect = 2e-60
 Identities = 112/192 (58%), Positives = 140/192 (72%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R+ IH IK +G PF+            S V        SF    PT+LFTRNHIS RDG 
Sbjct: 259 RSTIHNIKLHGFPFD-----------PSKVPDLGSALRSFILKRPTMLFTRNHISDRDGN 307

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LK RPVYA+DD+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I++IA  + +FF
Sbjct: 308 LKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKIASSFRSFF 367

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 542
           ++DWS +DQRLPRVITDI+++DFL  +IVI+HGYQPTY+YP+YPDL   K++ RMDN+L 
Sbjct: 368 TIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTYDYPSYPDLTPDKMFQRMDNILF 427

Query: 543 FLHTWYNNMTFL 578
           FLHTWYNN+ F+
Sbjct: 428 FLHTWYNNLVFV 439

[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  232 bits (591), Expect = 2e-59
 Identities = 108/192 (56%), Positives = 140/192 (72%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R+ IH IK +G PF+  +  DK            D   SF    P +LFTRNHIS RDG 
Sbjct: 259 RSTIHSIKLHGYPFDPSKVPDKG-----------DALRSFILKRPVMLFTRNHISDRDGN 307

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LK RPVYA+DD+FI +E  +TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y ++F
Sbjct: 308 LKQRPVYAMDDLFIRLESKITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSYF 367

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 542
           ++DWS +DQRLPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L 
Sbjct: 368 TIDWSGFDQRLPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILT 427

Query: 543 FLHTWYNNMTFL 578
           FLHTWYNN+ ++
Sbjct: 428 FLHTWYNNLVYV 439

[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  224 bits (571), Expect = 4e-57
 Identities = 107/192 (55%), Positives = 137/192 (71%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R+LIH+IK YG PF    +D    L +            FF   PT+LFTRNHIS RDG 
Sbjct: 257 RSLIHWIKLYGNPFRHCPSDLAQSLRE------------FFLQRPTMLFTRNHISDRDGI 304

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LK RPVYAVDD+F+ IE MLTFP  + ARKP CCIMYGLETIRGSN+ +++IA DY +FF
Sbjct: 305 LKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGLETIRGSNQILDKIASDYKSFF 364

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 542
           ++DWS +DQRLP VI  +++T+++  L+V+NHGY PTYEYP+YPDL  + +  R+ NL+ 
Sbjct: 365 TIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYEYPSYPDLTTNDMVSRLTNLIT 424

Query: 543 FLHTWYNNMTFL 578
           FL TWY NM F+
Sbjct: 425 FLATWYFNMVFV 436

[7][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  190 bits (483), Expect = 6e-47
 Identities = 93/192 (48%), Positives = 125/192 (65%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R L+H IK  G PF+     D+             +   F   +PT++FTRNHISKRDG 
Sbjct: 287 RFLVHKIKHSGYPFDFTSDSDRNS-----------KMADFLKSFPTMMFTRNHISKRDGT 335

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGLETIRGSN  ++ +A+ + +F 
Sbjct: 336 LKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGLETIRGSNIKLDSLAQGFISFA 395

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLH 542
           ++DWS YDQRLP  I   ++  +L SL++I+HGY PT EY     ++   ++ R  NL++
Sbjct: 396 TIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSEYED-TSMNISDMFTRFFNLIN 454

Query: 543 FLHTWYNNMTFL 578
           F  TWY NM FL
Sbjct: 455 FTATWYFNMVFL 466

[8][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  182 bits (462), Expect = 2e-44
 Identities = 77/122 (63%), Positives = 102/122 (83%)
 Frame = +3

Query: 213 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 392
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 393 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 572
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 61  LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120

Query: 573 FL 578
           ++
Sbjct: 121 YV 122

[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  131 bits (329), Expect = 4e-29
 Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 23/215 (10%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R+ +H IKEYG PF           TDS   + +   + +F   PT L  R+HISKRD  
Sbjct: 220 RSTVHNIKEYGFPFR--------PTTDSARNETL--LDLWFKKVPTELLVRSHISKRDN- 268

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LKVRPVY    I+I IE ML +PL  QARK  CCIMYGLETIRG    +E+I+  +++F 
Sbjct: 269 LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGLETIRGGMNELERISNAFNSFL 328

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP-----------------------T 473
            +DWS +D   P  I++ ++  +L + I+I+HGY                         +
Sbjct: 329 LIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISNYHDHVHSFSAQAQSHGIPMIS 388

Query: 474 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFL 578
            EY T P+        ++ NL+ FL  WY +M F+
Sbjct: 389 KEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFV 421

[10][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  123 bits (309), Expect = 9e-27
 Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 21/213 (9%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R+ +H IK YGLPF     + + ++              +F   PT L  R+HIS     
Sbjct: 224 RSTVHNIKLYGLPFKPHSYEARNKIL----------LELWFKKIPTELLVRSHISNPK-K 272

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LKVRPV     IF+ IE ML +PL  Q RK  C IMYGLETIRG    IE +A  +S F 
Sbjct: 273 LKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFM 332

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------P 494
            +DWS +DQ +P  + D++Y D++ +LI+++ GY   + Y  +                 
Sbjct: 333 MIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGDS 392

Query: 495 DLDEHK-----LYHRMDNLLHFLHTWYNNMTFL 578
           +L+E         ++++NLL F++TW+  M ++
Sbjct: 393 NLNEAPPEAAVFANKVENLLKFINTWFKEMVYI 425

[11][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  122 bits (306), Expect = 2e-26
 Identities = 73/213 (34%), Positives = 109/213 (51%), Gaps = 21/213 (9%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R+ +H IK YGLPF       + ++              +F   PT L  R+HIS     
Sbjct: 224 RSTVHNIKLYGLPFKPHSYAARNKILQE----------LWFKKIPTELLVRSHISNPK-K 272

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LKVRPV     IF+ IE ML +PL  Q RK  C IMYGLETIRG    IE +A  +S F 
Sbjct: 273 LKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGLETIRGGMMEIESLATRFSNFM 332

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY----------------P 494
            +DWS +DQ +P  + D++Y D++ +LI+++ GY   + Y  +                 
Sbjct: 333 MIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHNYNDHVHSFAAQARKLGVHGNS 392

Query: 495 DLDEHK-----LYHRMDNLLHFLHTWYNNMTFL 578
           +L+E         ++++NLL F++TW+  M ++
Sbjct: 393 NLNEAPPETAIFANKVENLLKFINTWFKEMVYI 425

[12][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  122 bits (305), Expect = 3e-26
 Identities = 76/215 (35%), Positives = 112/215 (52%), Gaps = 23/215 (10%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPF--NIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRD 176
           R+ +H IK YGLPF  +  +A ++T L              +F   PT L  R+HIS   
Sbjct: 224 RSTVHNIKLYGLPFKPHSYKARNQTLL------------ELWFKKIPTELLVRSHISNPK 271

Query: 177 GPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYST 356
             LKVRPV     IF+ IE ML +PL  Q RK  C IMYG ETIRG    IE +A  +S 
Sbjct: 272 -KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGFETIRGGMMEIESLATRFSN 330

Query: 357 FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTY--------------- 491
           F  +DWS +DQ +P  + D++Y D++ +LI+I+ GY   + Y  +               
Sbjct: 331 FMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHNYNDHVHSFAAQARKLGVHG 390

Query: 492 -PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFL 578
             +L+E         ++++NLL F++TW+  M ++
Sbjct: 391 NSNLNEAPPEASVFANKVENLLKFINTWFKEMVYI 425

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 54/160 (33%), Positives = 84/160 (52%)
 Frame = +3

Query: 3   RTLIHFIKEYGLPFNIIQADDKTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGP 182
           R ++H IK  G P     ++ KT      +  Y    N      PT+++ R+ ISK    
Sbjct: 245 RRIVHNIKYTGWPIPHDPSESKTSFLQRML--YWTLMN------PTVMYVRSQISKIT-K 295

Query: 183 LKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFF 362
           LKVRPVY    +F+++E MLT  L  Q RKP  CI++  ETIRG    + +I+ +++ F 
Sbjct: 296 LKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRGGMHELHRISTEFNVFM 355

Query: 363 SLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEY 482
             D+S +DQ  P  I   ++  F+  +I ++ GYQ +  Y
Sbjct: 356 GFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIY 395

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 73.9 bits (180), Expect = 8e-12
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
 Frame = +3

Query: 132 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 305
           Y    F R H+ + D P KVR V+      ++ ELM  +PL +   AR P   +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261

Query: 306 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 473
           + G    +   A D    YST  +LDWS +D+     +    +   +R +     GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321

Query: 474 YEYPTYPDLDEHKL 515
             YP  PD +  +L
Sbjct: 322 ISYPNAPDTNPDRL 335

[15][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 9/147 (6%)
 Frame = +3

Query: 132 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 308
           YP  + T++ I     P KVR ++ V  + +++E M  +PL    R +    +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258

Query: 309 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 473
            G     N  +        +  SLDWS +D R L  VI D+Y    ++S    N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318

Query: 474 YEYP---TYPDLDEHKLYHRMDNLLHF 545
            +YP   T+P    H L+  M   L F
Sbjct: 319 VDYPDSSTHPQ-KLHNLWDWMLTALKF 344

[16][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = +3

Query: 69  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 242
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 243 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 410
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 411 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 512
            I YT  ++S +    GY PT+  P +P  ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360

[17][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
 Frame = +3

Query: 132 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 305
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233

Query: 306 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 464
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288

Query: 465 QPTYEYPTYPDLDEHK 512
            PT+  PT+P  D  K
Sbjct: 289 VPTHSAPTHPQWDHTK 304

[18][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = +3

Query: 69  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 242
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 243 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 410
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 411 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 512
            I YT  ++S +    GY PT+  P +P  ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360

[19][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
 Frame = +3

Query: 132 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 305
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289

Query: 306 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 464
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344

Query: 465 QPTYEYPTYPDLDEHK 512
            PT+  PT+P  D  K
Sbjct: 345 VPTHSAPTHPQWDHTK 360

[20][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = +3

Query: 69  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 242
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 243 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 410
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 411 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 512
            I YT  ++S +    GY PT+  P +P  ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360

[21][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = +3

Query: 69  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 242
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 243 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 410
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 411 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 512
            I YT  ++S +    GY PT+  P +P  ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360

[22][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
 Frame = +3

Query: 69  TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 242
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 243 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 410
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 411 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHK 512
            I YT  ++S +    GY PT+  P +P  ++ K
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDK 360

[23][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
           partitivirus RepID=A2VA07_9VIRU
          Length = 132

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
 Frame = +3

Query: 138 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 308
           T L +R+H+ + D P K+R V+ V  + +++E M  + +    +        +++G ETI
Sbjct: 8   TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67

Query: 309 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 473
           RG   + I Q+ ++  S+  S DWS +D + L  VI D++  D  +S    N GY+P+
Sbjct: 68  RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123

[24][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
 Frame = +3

Query: 102 IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 269
           +++   FFN +  P LL T+  I K++ P K+R ++     +II E M  +     I+  
Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277

Query: 270 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 428
             +  +++G ET  G         +   I R   +F +LDWS +D+R    ++  I YT 
Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333

Query: 429 FLRSLIVINHGYQPTYEYPTYPDLDEHKL 515
            +++ +    GY PT+  PT+P   +  +
Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI 361