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[1][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 311 bits (798), Expect = 2e-83
Identities = 146/190 (76%), Positives = 169/190 (88%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSYLPVH PVYAFCVIMWGHSSNA+ ASL GAY YLGDQEASVL+LPLLC
Sbjct: 596 AKSVCLNLHIRSYLPVHLPVYAFCVIMWGHSSNAEQASLSGAYVYLGDQEASVLQLPLLC 655
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+IGN+++D +AY+RSLVLSTCF+G SG+ AGQ MFGITAVEFTEYLP+S+GGITHERDS
Sbjct: 656 GYIGNALEDMEAYKRSLVLSTCFFGTSGLSAGQNMFGITAVEFTEYLPTSYGGITHERDS 715
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEKQP 541
W+ +LR HQG +K RFISGFNVVD +EAGKE+ + FP+F L+PV +QPIVR FGEEKQP
Sbjct: 716 WNQMLRNHQGTDKQRFISGFNVVDFVEAGKEKQLSFPEFDLQPVPKSQPIVRTFGEEKQP 775
Query: 542 LLNKSSSLKV 571
LLNKS S++V
Sbjct: 776 LLNKSRSMRV 785
[2][TOP]
>UniRef100_UPI000016782A movement protein n=1 Tax=Tomato black ring virus RepID=UPI000016782A
Length = 832
Score = 308 bits (790), Expect = 1e-82
Identities = 145/190 (76%), Positives = 167/190 (87%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSYLPVH PVYAFCVIMWGHSSNA+ ASL GAY YLGDQEASVL+LPLLC
Sbjct: 596 AKSVCLNLHIRSYLPVHLPVYAFCVIMWGHSSNAEQASLSGAYVYLGDQEASVLQLPLLC 655
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+IGN+++D AY+RSLVLSTCF+G SG+ AGQ MFGITAVEFTEYLP+S+GGITHERDS
Sbjct: 656 GYIGNALEDMDAYKRSLVLSTCFFGTSGLSAGQNMFGITAVEFTEYLPTSYGGITHERDS 715
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEKQP 541
W+ +LR HQG +K RFISGFNVVD +EAGKE+ + FP+F L+PV +QP VR FGEEKQP
Sbjct: 716 WNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLNFPEFDLQPVPKSQPTVRTFGEEKQP 775
Query: 542 LLNKSSSLKV 571
LLNKS S++V
Sbjct: 776 LLNKSRSMRV 785
[3][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 308 bits (790), Expect = 1e-82
Identities = 145/190 (76%), Positives = 167/190 (87%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSYLPVH PVYAFCVIMWGHSSNA+ ASL GAY YLGDQEASVL+LPLLC
Sbjct: 596 AKSVCLNLHIRSYLPVHLPVYAFCVIMWGHSSNAEQASLSGAYVYLGDQEASVLQLPLLC 655
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+IGN+++D AY+RSLVLSTCF+G SG+ AGQ MFGITAVEFTEYLP+S+GGITHERDS
Sbjct: 656 GYIGNALEDMDAYKRSLVLSTCFFGTSGLSAGQNMFGITAVEFTEYLPTSYGGITHERDS 715
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEKQP 541
W+ +LR HQG +K RFISGFNVVD +EAGKE+ + FP+F L+PV +QP VR FGEEKQP
Sbjct: 716 WNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLNFPEFDLQPVPKSQPTVRTFGEEKQP 775
Query: 542 LLNKSSSLKV 571
LLNKS S++V
Sbjct: 776 LLNKSRSMRV 785
[4][TOP]
>UniRef100_UPI0000163D15 84 kDa protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D15
Length = 810
Score = 308 bits (788), Expect = 3e-82
Identities = 145/190 (76%), Positives = 167/190 (87%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSYLPVH PVYAFCVIMWGHSSNA+ ASL GAY YLGDQEASVL+LPLLC
Sbjct: 572 AKSVCLNLHIRSYLPVHLPVYAFCVIMWGHSSNAEQASLSGAYVYLGDQEASVLQLPLLC 631
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+IGN+++D +AY+RSLVLSTCF+G SG+ GQ MFGITAVEFTEYLP+S+GGITHERDS
Sbjct: 632 GYIGNALEDMEAYKRSLVLSTCFFGTSGLSPGQNMFGITAVEFTEYLPTSYGGITHERDS 691
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEKQP 541
W+ +LR HQG +K RFISGFNVVD +EAGKE+ + FPDF L+PV QPIVR FG+EKQP
Sbjct: 692 WNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLHFPDFDLQPVPKHQPIVRTFGKEKQP 751
Query: 542 LLNKSSSLKV 571
LLNKS S++V
Sbjct: 752 LLNKSRSMRV 761
[5][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 308 bits (788), Expect = 3e-82
Identities = 145/190 (76%), Positives = 167/190 (87%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSYLPVH PVYAFCVIMWGHSSNA+ ASL GAY YLGDQEASVL+LPLLC
Sbjct: 572 AKSVCLNLHIRSYLPVHLPVYAFCVIMWGHSSNAEQASLSGAYVYLGDQEASVLQLPLLC 631
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+IGN+++D +AY+RSLVLSTCF+G SG+ GQ MFGITAVEFTEYLP+S+GGITHERDS
Sbjct: 632 GYIGNALEDMEAYKRSLVLSTCFFGTSGLSPGQNMFGITAVEFTEYLPTSYGGITHERDS 691
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNFGEEKQP 541
W+ +LR HQG +K RFISGFNVVD +EAGKE+ + FPDF L+PV QPIVR FG+EKQP
Sbjct: 692 WNQMLRNHQGVDKQRFISGFNVVDFVEAGKEKQLHFPDFDLQPVPKHQPIVRTFGKEKQP 751
Query: 542 LLNKSSSLKV 571
LLNKS S++V
Sbjct: 752 LLNKSRSMRV 761
[6][TOP]
>UniRef100_UPI0000163DFD movement protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFD
Length = 837
Score = 294 bits (752), Expect = 4e-78
Identities = 140/191 (73%), Positives = 166/191 (86%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSY+PVH+P+YAFCVIMWGHSS+A+ ASLCGA YLGDQEA+VLELPL+C
Sbjct: 599 AKSVCLNLHIRSYVPVHTPLYAFCVIMWGHSSDAETASLCGAGVYLGDQEAAVLELPLVC 658
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
S++GNS++DF AY+RSLVLST F+G SG+ AGQ +FGITAVEFTEY+P+S+GGITHERDS
Sbjct: 659 SYLGNSLEDFDAYKRSLVLSTVFFGKSGLFAGQNVFGITAVEFTEYMPTSYGGITHERDS 718
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEEKQ 538
W A+LR HQGK+K RFI+GFNVVD LE KE +K P+ LEPV TQPIVR F GE KQ
Sbjct: 719 WQAMLRNHQGKDKGRFIAGFNVVDALERDKEEPIKMPNLDLEPVPRTQPIVRTFTGEGKQ 778
Query: 539 PLLNKSSSLKV 571
PLLNKS S+++
Sbjct: 779 PLLNKSRSMRI 789
[7][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 294 bits (752), Expect = 4e-78
Identities = 140/191 (73%), Positives = 166/191 (86%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSY+PVH+P+YAFCVIMWGHSS+A+ ASLCGA YLGDQEA+VLELPL+C
Sbjct: 599 AKSVCLNLHIRSYVPVHTPLYAFCVIMWGHSSDAETASLCGAGVYLGDQEAAVLELPLVC 658
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
S++GNS++DF AY+RSLVLST F+G SG+ AGQ +FGITAVEFTEY+P+S+GGITHERDS
Sbjct: 659 SYLGNSLEDFDAYKRSLVLSTVFFGKSGLFAGQNVFGITAVEFTEYMPTSYGGITHERDS 718
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEEKQ 538
W A+LR HQGK+K RFI+GFNVVD LE KE +K P+ LEPV TQPIVR F GE KQ
Sbjct: 719 WQAMLRNHQGKDKGRFIAGFNVVDALERDKEEPIKMPNLDLEPVPRTQPIVRTFTGEGKQ 778
Query: 539 PLLNKSSSLKV 571
PLLNKS S+++
Sbjct: 779 PLLNKSRSMRI 789
[8][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 282 bits (721), Expect = 1e-74
Identities = 132/191 (69%), Positives = 164/191 (85%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSVCLNLHIRSY+PVH+P+Y FCVIMWGHSS+A+ ASLCGA CYLGDQEA+VLELPL+C
Sbjct: 603 AKSVCLNLHIRSYVPVHTPLYVFCVIMWGHSSDAETASLCGAGCYLGDQEAAVLELPLVC 662
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
SH+GNS++DF+AY+RSLVLS+ F+G +G+ GQ +FGITAVEFTEY+P+S+GGITHERDS
Sbjct: 663 SHLGNSLEDFEAYQRSLVLSSVFFGKAGLSGGQPVFGITAVEFTEYMPTSYGGITHERDS 722
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEEKQ 538
W A+LR HQGK+K RFI+GFNVVD LE KE ++ P +LEPV +P+VR F GE KQ
Sbjct: 723 WQAMLRNHQGKDKGRFIAGFNVVDALERDKEEPIQMPHLELEPVPRHRPVVRTFTGEGKQ 782
Query: 539 PLLNKSSSLKV 571
P L+KS S+++
Sbjct: 783 P-LDKSRSMRI 792
[9][TOP]
>UniRef100_UPI0000164A25 movement protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A25
Length = 683
Score = 233 bits (593), Expect = 1e-59
Identities = 114/191 (59%), Positives = 146/191 (76%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSV LNLHIRSYLP YAFCVIMWGHSS+A A+L G+Y YLGD EA++L+LPLLC
Sbjct: 452 AKSVVLNLHIRSYLPQQMNAYAFCVIMWGHSSDAQEAALSGSYVYLGDGEATMLQLPLLC 511
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
++G+++ DF+AY+RSLVLST F SGI G+ MFGIT++EFTEYLP+S GITHERDS
Sbjct: 512 EYVGHNLQDFEAYKRSLVLSTVFPEFSGIADGKAMFGITSIEFTEYLPTSHAGITHERDS 571
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEEKQ 538
W A+LR H +EK RF++GFNVVD +E G +G FPDF L+ V Q +VR F ++
Sbjct: 572 WDAMLRNHT-EEKRRFLAGFNVVDTIEKGNRKGFSFPDFDLKAVPRHQAVVRTFEDQDVA 630
Query: 539 PLLNKSSSLKV 571
P+L+K+ S++V
Sbjct: 631 PILSKAKSMRV 641
[10][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 233 bits (593), Expect = 1e-59
Identities = 114/191 (59%), Positives = 146/191 (76%), Gaps = 1/191 (0%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
AKSV LNLHIRSYLP YAFCVIMWGHSS+A A+L G+Y YLGD EA++L+LPLLC
Sbjct: 452 AKSVVLNLHIRSYLPQQMNAYAFCVIMWGHSSDAQEAALSGSYVYLGDGEATMLQLPLLC 511
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
++G+++ DF+AY+RSLVLST F SGI G+ MFGIT++EFTEYLP+S GITHERDS
Sbjct: 512 EYVGHNLQDFEAYKRSLVLSTVFPEFSGIADGKAMFGITSIEFTEYLPTSHAGITHERDS 571
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIVRNF-GEEKQ 538
W A+LR H +EK RF++GFNVVD +E G +G FPDF L+ V Q +VR F ++
Sbjct: 572 WDAMLRNHT-EEKRRFLAGFNVVDTIEKGNRKGFSFPDFDLKAVPRHQAVVRTFEDQDVA 630
Query: 539 PLLNKSSSLKV 571
P+L+K+ S++V
Sbjct: 631 PILSKAKSMRV 641
[11][TOP]
>UniRef100_UPI00003E1861 movement protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1861
Length = 360
Score = 95.5 bits (236), Expect = 3e-18
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
+K+V L++ + SY+P +P+ AF IM G + + A+LC Y LG +++ VL LPL+
Sbjct: 128 SKNVSLDIGVTSYMPYGAPIVAFMTIMDGRTDDPQEAALCANYMDLGREKSKVLSLPLVT 187
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+ + ++ Q L + T F+G+ + G M +EF EY +SF T R+S
Sbjct: 188 IPL-SEIEHDQGILDCLYIVTYFHGVQSYQPGTLMMSYGTLEFQEYSNNSFTTATRVRES 246
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNFGEEKQ 538
W +L++++ K R +G V+ +E ++ ++ FP LE +P+VR F Q
Sbjct: 247 WDQILKRNENLGK-RVHAGIGVLGTIEKEMDQQLEDFPAINLE--TRPRPVVRTFQNAHQ 303
Query: 539 PLLNKSSSLKVG 574
P L+K+ S+++G
Sbjct: 304 P-LHKTRSMRIG 314
[12][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
Length = 1101
Score = 95.5 bits (236), Expect = 3e-18
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
+K+V L++ + SY+P +P+ AF IM G + + A+LC Y LG +++ VL LPL+
Sbjct: 356 SKNVSLDIGVTSYMPYGAPIVAFMTIMDGRTDDPQEAALCANYMDLGREKSKVLSLPLVT 415
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+ + ++ Q L + T F+G+ + G M +EF EY +SF T R+S
Sbjct: 416 IPL-SEIEHDQGILDCLYIVTYFHGVQSYQPGTLMMSYGTLEFQEYSNNSFTTATRVRES 474
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNFGEEKQ 538
W +L++++ K R +G V+ +E ++ ++ FP LE +P+VR F Q
Sbjct: 475 WDQILKRNENLGK-RVHAGIGVLGTIEKEMDQQLEDFPAINLE--TRPRPVVRTFQNAHQ 531
Query: 539 PLLNKSSSLKVG 574
P L+K+ S+++G
Sbjct: 532 P-LHKTRSMRIG 542
[13][TOP]
>UniRef100_A2ID55 Polyprotein (Fragment) n=1 Tax=Tomato white ringspot virus
RepID=A2ID55_9SECO
Length = 784
Score = 81.3 bits (199), Expect = 5e-14
Identities = 49/159 (30%), Positives = 86/159 (54%)
Frame = +2
Query: 23 LHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGNSV 202
L ++S++ +P+ AF +M G + +A+ A+L G Y +G A+ + LPL IG +
Sbjct: 17 LGLQSFVGEGTPMVAFTTLMDGRTDDANQAALAGNYFDMGRDTANAVNLPLTAFDIGRQL 76
Query: 203 DDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALLRK 382
+ L L+T F L G ++G+ F + EF E+ P + T ++ W +L+
Sbjct: 77 ETLDDPCGCLYLATVFNDLKGFRSGESAFKYSVAEFQEHKPRAGFSTTRIKNDWDQILQA 136
Query: 383 HQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDL 499
++ + + R ++GFN+VDV+ GKE PDF E +D+
Sbjct: 137 NKDRGQ-RVVAGFNLVDVV--GKEFNEPLPDF--EAIDI 170
[14][TOP]
>UniRef100_Q9YK98 Coat protein n=2 Tax=Blackcurrant reversion virus RepID=POL2_BRAV
Length = 1626
Score = 74.7 bits (182), Expect = 5e-12
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Frame = +2
Query: 8 SVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSH 187
+V L++ I+S++P P AF +M + +SLCG+Y LG A L LPL+
Sbjct: 864 TVALDIGIQSHIPQGMPTVAFVNVMDTRIEDPLYSSLCGSYIDLGRDRAKTLCLPLVNFP 923
Query: 188 IGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWH 367
+ +D L+L T F + G+ F +EF E+ PS++ + RD+W
Sbjct: 924 MSKLAEDVDDVLNGLMLCTHFQDSTKFGVGKPAFQYGTLEFQEFKPSAYSDFSRVRDNWD 983
Query: 368 ALLRKHQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF 523
A + K Q R ++GF+V+ + + + F +L +P+V F
Sbjct: 984 A-IAKQQNTPNDRILAGFSVLGAVSQAYNQALPVFKSVELVAPPKRKPVVATF 1035
[15][TOP]
>UniRef100_UPI000043F352 putative movemenr protein n=1 Tax=Cherry rasp leaf virus
RepID=UPI000043F352
Length = 340
Score = 65.1 bits (157), Expect = 4e-09
Identities = 42/158 (26%), Positives = 80/158 (50%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
+ +V L++ ++S++ +P+ A C IM + + + A Y LG ++ LPL+
Sbjct: 137 SSNVALDMAVQSHVGQGTPLLAMCGIMDSRTDDPNEALQVAGYFDLGRDRCDLISLPLI- 195
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+ + +DF Y R L L T F+ + G + + + +AV F ++ + + ++S
Sbjct: 196 -NFPLNKEDFDDYMRGLYLCTMFHNVRGFQNNKALCSYSAVGFDQHKETPRCIRSRVKES 254
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPD 475
W +L ++ E SR SG N+++ +E KER PD
Sbjct: 255 WEDILARNNENEFSRVQSGQNLLNAIE--KERNEAIPD 290
[16][TOP]
>UniRef100_Q8JMH5 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q8JMH5_CRLV
Length = 960
Score = 65.1 bits (157), Expect = 4e-09
Identities = 42/158 (26%), Positives = 80/158 (50%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
+ +V L++ ++S++ +P+ A C IM + + + A Y LG ++ LPL+
Sbjct: 137 SSNVALDMAVQSHVGQGTPLLAMCGIMDSRTDDPNEALQVAGYFDLGRDRCDLISLPLI- 195
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+ + +DF Y R L L T F+ + G + + + +AV F ++ + + ++S
Sbjct: 196 -NFPLNKEDFDDYMRGLYLCTMFHNVRGFQNNKALCSYSAVGFDQHKETPRCIRSRVKES 254
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPD 475
W +L ++ E SR SG N+++ +E KER PD
Sbjct: 255 WEDILARNNENEFSRVQSGQNLLNAIE--KERNEAIPD 290
[17][TOP]
>UniRef100_Q6EWG8 Polyprotein n=1 Tax=Cherry rasp leaf virus RepID=Q6EWG8_CRLV
Length = 960
Score = 65.1 bits (157), Expect = 4e-09
Identities = 42/158 (26%), Positives = 80/158 (50%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
+ +V L++ ++S++ +P+ A C IM + + + A Y LG ++ LPL+
Sbjct: 137 SSNVALDMAVQSHVGQGTPLLAMCGIMDSRTDDPNEALQVAGYFDLGRDRCDLISLPLI- 195
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+ + +DF Y R L L T F+ + G + + + +AV F ++ + + ++S
Sbjct: 196 -NFPLNKEDFDDYMRGLYLCTMFHNVRGFQNNKALCSYSAVGFDQHKETPRCIRSRVKES 254
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPD 475
W +L ++ E SR SG N+++ +E KER PD
Sbjct: 255 WEDILARNNENEFSRVQSGQNLLNAIE--KERNEAIPD 290
[18][TOP]
>UniRef100_UPI0000164A4B movement protein n=1 Tax=Apple latent spherical virus
RepID=UPI0000164A4B
Length = 376
Score = 63.2 bits (152), Expect = 1e-08
Identities = 40/158 (25%), Positives = 80/158 (50%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
+ +V L++ ++S++ +P+ A C IM + + + A Y LG + ++ LPL+
Sbjct: 139 SSNVALDMSVQSHVGQGTPLLAMCGIMDSRTDDPNEALQVAGYFDLGRDKCDLISLPLI- 197
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+ + +DF Y R L L T F+ + G + + + +AV F ++ + + + S
Sbjct: 198 -NFPLNKEDFDDYMRGLYLCTMFHNVRGFQNNKALCSYSAVGFDQHKETPRCIRSRVKQS 256
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPD 475
W +L ++ E +R SG N+++ +E K+R PD
Sbjct: 257 WEDILARNNESEYTRVQSGQNLLNAIE--KDRNEAIPD 292
[19][TOP]
>UniRef100_Q9JGP1 108K polyprotein n=1 Tax=Apple latent spherical virus
RepID=Q9JGP1_9SECO
Length = 961
Score = 63.2 bits (152), Expect = 1e-08
Identities = 40/158 (25%), Positives = 80/158 (50%)
Frame = +2
Query: 2 AKSVCLNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLC 181
+ +V L++ ++S++ +P+ A C IM + + + A Y LG + ++ LPL+
Sbjct: 139 SSNVALDMSVQSHVGQGTPLLAMCGIMDSRTDDPNEALQVAGYFDLGRDKCDLISLPLI- 197
Query: 182 SHIGNSVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDS 361
+ + +DF Y R L L T F+ + G + + + +AV F ++ + + + S
Sbjct: 198 -NFPLNKEDFDDYMRGLYLCTMFHNVRGFQNNKALCSYSAVGFDQHKETPRCIRSRVKQS 256
Query: 362 WHALLRKHQGKEKSRFISGFNVVDVLEAGKERGMKFPD 475
W +L ++ E +R SG N+++ +E K+R PD
Sbjct: 257 WEDILARNNESEYTRVQSGQNLLNAIE--KDRNEAIPD 292
[20][TOP]
>UniRef100_Q9E7L2 Polyprotein (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q9E7L2_9SECO
Length = 357
Score = 60.8 bits (146), Expect = 7e-08
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 129 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLASQNNRSLNLPLLSLPFSR 188
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 189 LLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIK 248
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R ++ +V E G +K + L PV QP RNF GE
Sbjct: 249 KRACHGG---GRCVASQGIVQTWEKGVNPPLKEYAPLVLPPV--PQP-KRNFIDQQTGEV 302
Query: 533 KQPLLNKSSSLK 568
QP + KS S++
Sbjct: 303 VQPFMQKSRSMR 314
[21][TOP]
>UniRef100_Q9E7K7 Polyprotein (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q9E7K7_9SECO
Length = 357
Score = 57.4 bits (137), Expect = 8e-07
Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 129 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLASQNNRSLNLPLLSLPFSR 188
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 189 LLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 248
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R ++ +V E +K + L PV QP RNF GE
Sbjct: 249 KRACHGG---GRCVASQGIVQTWEKEVNPPLKEYAPLVLPPV--PQP-KRNFIDQQTGEV 302
Query: 533 KQPLLNKSSSLK 568
QP + KS S++
Sbjct: 303 VQPFIQKSRSMR 314
[22][TOP]
>UniRef100_Q9E7L3 Polyprotein (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q9E7L3_9SECO
Length = 357
Score = 57.0 bits (136), Expect = 1e-06
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 129 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLASQNNRSLNLPLLSLPFSR 188
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 189 LLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 248
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R ++ +V E +K + L P+ QP RNF GE
Sbjct: 249 KRACHGG---GRCVASQGIVQTWEKEVNPPLKEYAPLVLPPI--PQP-KRNFIDQQTGEV 302
Query: 533 KQPLLNKSSSLK 568
QP + KS S++
Sbjct: 303 VQPFMQKSRSMR 314
[23][TOP]
>UniRef100_UPI0000231CDE movement protein n=1 Tax=Raspberry ringspot virus
RepID=UPI0000231CDE
Length = 592
Score = 56.6 bits (135), Expect = 1e-06
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 371 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLAAQNNRSLNLPLLSLPFSR 430
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 431 LLADLHDFQHRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 490
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R ++ +V E +K + L PV QP RNF GE
Sbjct: 491 KRACHGG---GRCVASQGIVQTWEKEVNPPLKEYAPLVLPPV--PQP-KRNFIDQQSGEV 544
Query: 533 KQPLLNKSSSLK 568
+PL+ KS S++
Sbjct: 545 VRPLIQKSRSMR 556
[24][TOP]
>UniRef100_Q9E7K8 Polyprotein (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q9E7K8_9SECO
Length = 357
Score = 56.6 bits (135), Expect = 1e-06
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 7/191 (3%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 129 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLASQNNRSLNLPLLSLPFSR 188
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 189 LLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 248
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQP----IVRNFGEEK 535
++ H G R ++ +V E +K + L PV QP I + GE
Sbjct: 249 KRACHGG---GRCVASQGIVQTWEKEVNPPLKEYAPLVLPPV--PQPKRSFIDQQTGEVV 303
Query: 536 QPLLNKSSSLK 568
QP + KS S++
Sbjct: 304 QPFMQKSRSMR 314
[25][TOP]
>UniRef100_Q6W8W3 Coat protein n=1 Tax=Raspberry ringspot virus strain cherry
RepID=POL2_RRVC
Length = 1106
Score = 56.6 bits (135), Expect = 1e-06
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 371 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLAAQNNRSLNLPLLSLPFSR 430
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 431 LLADLHDFQHRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 490
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R ++ +V E +K + L PV QP RNF GE
Sbjct: 491 KRACHGG---GRCVASQGIVQTWEKEVNPPLKEYAPLVLPPV--PQP-KRNFIDQQSGEV 544
Query: 533 KQPLLNKSSSLK 568
+PL+ KS S++
Sbjct: 545 VRPLIQKSRSMR 556
[26][TOP]
>UniRef100_Q9E7K9 Polyprotein (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q9E7K9_9SECO
Length = 357
Score = 54.3 bits (129), Expect = 7e-06
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 129 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLASQNNRSLNLPLLSLPFSR 188
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 189 LLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 248
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R ++ +V E +K + L PV QP RNF GE
Sbjct: 249 KRACHGG---GRCVASQGIVQTWEKEVNPPLKEYAPLVLPPV--PQP-KRNFIDQQTGEV 302
Query: 533 KQPLLNKSSSLK 568
Q + KS S++
Sbjct: 303 VQSFMQKSRSMR 314
[27][TOP]
>UniRef100_P36324 Coat protein n=1 Tax=Raspberry ringspot virus (strain S)
RepID=POL2_RRVS
Length = 1107
Score = 54.3 bits (129), Expect = 7e-06
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 372 VDLAVKSHIAVGTPVRVIISLVDGACSDMPTATMCAFEVNLASQNNRSLNLPLLSLPFSR 431
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 432 LLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 491
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R ++ +V E +K + L PV QP RNF GE
Sbjct: 492 KRACHGG---GRCVASQGIVQTWEKEVNPPLKEYAPLVLPPV--PQP-KRNFIDQQTGEV 545
Query: 533 KQPLLNKSSSLK 568
Q + KS S++
Sbjct: 546 VQSFMQKSRSMR 557
[28][TOP]
>UniRef100_Q9E7L4 Polyprotein (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q9E7L4_9SECO
Length = 357
Score = 53.9 bits (128), Expect = 9e-06
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G ++ A++C L Q L LPLL
Sbjct: 129 VDLAVKSHVAVGTPVRVIISLVDGACADMPTATMCAFEVNLASQNNRSLNLPLLSLPFSR 188
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 189 LLADLHDFQNRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERNSLLRDSWSEIE 248
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMKFPDFKLEPVDLTQPIV----RNF----- 523
++ H G R ++ +V E +K E L P V RNF
Sbjct: 249 KRACHGG---GRCVASQGIVQTWEKEVNPPLK------EYAPLVLPSVPQPKRNFIDQQT 299
Query: 524 GEEKQPLLNKSSSLK 568
GE QP + KS S++
Sbjct: 300 GEVVQPFMQKSRSMR 314
[29][TOP]
>UniRef100_Q24M89 Polyprotein 2 n=1 Tax=Raspberry ringspot virus RepID=Q24M89_9SECO
Length = 1107
Score = 53.9 bits (128), Expect = 9e-06
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Frame = +2
Query: 17 LNLHIRSYLPVHSPVYAFCVIMWGHSSNADLASLCGAYCYLGDQEASVLELPLLCSHIGN 196
++L ++S++ V +PV ++ G S+ A++C L Q L LPLL
Sbjct: 372 VDLAVKSHVAVGTPVRVIISLVDGACSDMPTATMCAFEVNLATQNNRSLNLPLLSLPFSQ 431
Query: 197 SVDDFQAYERSLVLSTCFYGLSGIKAGQQMFGITAVEFTEYLPSSFGGITHERDSWHALL 376
+ D ++ + ++ F G G M +++EF+E ++F + RDSW +
Sbjct: 432 LLADLHDFQHRVKIACQFRDPEGFNVGTPMLSFSSLEFSELKQTAFERKSLLRDSWSEIE 491
Query: 377 RK--HQGKEKSRFISGFNVVDVLEAGKERGMK-FPDFKLEPVDLTQPIVRNF-----GEE 532
++ H G R I+ +V E +K + L PV QP RNF GE
Sbjct: 492 KRACHGG---GRCIASQGIVQTWEKEINPPLKEYAPLVLPPV--PQP-RRNFIGQQSGEV 545
Query: 533 KQPLLNKSSSLK 568
+P L KS S++
Sbjct: 546 VKPWLPKSRSMR 557