BB903058 ( RCE00802 )

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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
           RepID=Q64959_9SECO
          Length = 510

 Score =  211 bits (537), Expect = 3e-53
 Identities = 101/176 (57%), Positives = 125/176 (71%), Gaps = 4/176 (2%)
 Frame = +3

Query: 60  IQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDSQPDLCKQINYKQR 239
           IQ+   +TANFG  GA+FW++PLS+P AP+ VE+KFEFYIRI GID  PDLC+QINYKQR
Sbjct: 284 IQAACCATANFGDSGARFWIMPLSAPRAPQTVETKFEFYIRILGIDVIPDLCRQINYKQR 343

Query: 240 FGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATTGMHWGKCIVHFT 416
           FGWFM+ P + T  E    +PSR+ N+ +K   C NF NAFAIMCATTGMHWG+CI+HFT
Sbjct: 344 FGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAFAIMCATTGMHWGRCILHFT 403

Query: 417 WAWKHNIEASKMKGNLS---FGTGMGTKDVHYGETRVFSIYDNSYSIPFEFGSFAG 575
           W+W  N EA K    +S       +  + +  G  R   +YDN+YSIPFEFGSFAG
Sbjct: 404 WSWHRNTEAGKNAREISQSRLEWVIVLQHIILG-IRGILVYDNAYSIPFEFGSFAG 458

[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
           RepID=UPI0000163D16
          Length = 514

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/196 (52%), Positives = 133/196 (67%), Gaps = 5/196 (2%)
 Frame = +3

Query: 3   QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
           Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+YI+
Sbjct: 267 QLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQ 326

Query: 183 IHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNFVN 353
           I GID+ P +C+QINY QRF WF +++P      K  ++ +PSRV N+  K    TN+VN
Sbjct: 327 ILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVN 386

Query: 354 AFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSI 527
           AFAIMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  H+GE  +   
Sbjct: 387 AFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGP 446

Query: 528 YDNSYSIPFEFGSFAG 575
             +S ++PFEFGSFAG
Sbjct: 447 LSSSLAVPFEFGSFAG 462

[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
          Length = 1324

 Score =  209 bits (531), Expect = 2e-52
 Identities = 102/196 (52%), Positives = 133/196 (67%), Gaps = 5/196 (2%)
 Frame = +3

Query: 3    QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
            Q  QMPH D        L+IQSPFY+TANFG  GA+FWV P+SSPMAPE +ESK E+YI+
Sbjct: 1077 QLSQMPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQ 1136

Query: 183  IHGIDSQPDLCKQINYKQRFGWF-MVKPEG--TDKEFQMFVPSRVSNLVIKGVDCTNFVN 353
            I GID+ P +C+QINY QRF WF +++P      K  ++ +PSRV N+  K    TN+VN
Sbjct: 1137 ILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVN 1196

Query: 354  AFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSI 527
            AFAIMCATTGMH GKCI+HF+W          ++G++SF +GMG   +  H+GE  +   
Sbjct: 1197 AFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGP 1256

Query: 528  YDNSYSIPFEFGSFAG 575
              +S ++PFEFGSFAG
Sbjct: 1257 LSSSLAVPFEFGSFAG 1272

[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
          Length = 520

 Score =  203 bits (517), Expect = 7e-51
 Identities = 97/193 (50%), Positives = 129/193 (66%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3   QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
           Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+YI+
Sbjct: 266 QLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQ 325

Query: 183 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFVNA 356
           I GI++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V  TNFVNA
Sbjct: 326 IKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNA 385

Query: 357 FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 536
            AI+CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T  ++   N
Sbjct: 386 LAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSN 444

Query: 537 SYSIPFEFGSFAG 575
           ++S+PF+FGSFAG
Sbjct: 445 THSVPFQFGSFAG 457

[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
          Length = 1357

 Score =  203 bits (517), Expect = 7e-51
 Identities = 97/193 (50%), Positives = 129/193 (66%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3    QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
            Q  QMPH D+       L+IQSPF+STANFG+ G+ F+V  L +PMAPE VE+  E+YI+
Sbjct: 1103 QLAQMPHVDVEVNVDASLQIQSPFFSTANFGNSGSAFYVSTLCAPMAPETVETGSEYYIQ 1162

Query: 183  IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDK--EFQMFVPSRVSNLVIKGVDCTNFVNA 356
            I GI++ P LC++INYKQRF W +++     K    ++ +PSR+ NL  K V  TNFVNA
Sbjct: 1163 IKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNA 1222

Query: 357  FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 536
             AI+CATTGMH G C +HF+W W H  E  K  G L F  GMG  + H G+T  ++   N
Sbjct: 1223 LAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSN 1281

Query: 537  SYSIPFEFGSFAG 575
            ++S+PF+FGSFAG
Sbjct: 1282 THSVPFQFGSFAG 1294

[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
          Length = 1344

 Score =  190 bits (482), Expect = 8e-47
 Identities = 90/195 (46%), Positives = 128/195 (65%), Gaps = 4/195 (2%)
 Frame = +3

Query: 3    QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
            +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI 
Sbjct: 1099 ELAQIPHVDVTLDAKATLQIQSPFFATANFGDDGTAFYIATLCAPLAPETMETGFQYYIH 1158

Query: 183  IHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNA 356
            IHGI+++  LC++INY Q F WFM++     T     + +P+R++NL  K V  TNFVNA
Sbjct: 1159 IHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNA 1218

Query: 357  FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSIY 530
             AIMCATTGMH+GKC +HF+W W +  + +   G +S  TGMG   V  H+G    F   
Sbjct: 1219 LAIMCATTGMHFGKCTLHFSWGW-YRGKLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYP 1277

Query: 531  DNSYSIPFEFGSFAG 575
              S+S+PF+FGSFAG
Sbjct: 1278 ATSFSLPFQFGSFAG 1292

[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
          Length = 511

 Score =  186 bits (472), Expect = 1e-45
 Identities = 89/195 (45%), Positives = 126/195 (64%), Gaps = 4/195 (2%)
 Frame = +3

Query: 3   QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
           +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI 
Sbjct: 266 ELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIH 325

Query: 183 IHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNA 356
           IHGI  + +LC++INY Q F WFM++     T     + +P+R++NL  K V  TNFVNA
Sbjct: 326 IHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNA 385

Query: 357 FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSIY 530
            AIMCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H+G    F+  
Sbjct: 386 LAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYP 444

Query: 531 DNSYSIPFEFGSFAG 575
             ++S+PF+FGSFAG
Sbjct: 445 ATNFSLPFQFGSFAG 459

[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
          Length = 1343

 Score =  186 bits (472), Expect = 1e-45
 Identities = 89/195 (45%), Positives = 126/195 (64%), Gaps = 4/195 (2%)
 Frame = +3

Query: 3    QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
            +  Q+PH D+       L+IQSPF++TANFG +G  F++  L +P+APE +E+ F++YI 
Sbjct: 1098 ELAQIPHVDVTLDTKATLQIQSPFFATANFGDDGTAFYISTLCAPLAPETMETGFQYYIH 1157

Query: 183  IHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNA 356
            IHGI  + +LC++INY Q F WFM++     T     + +P+R++NL  K V  TNFVNA
Sbjct: 1158 IHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNA 1217

Query: 357  FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSIY 530
             AIMCATTGMH+GKC +HF+W W    + +   G  S  TGMG   V  H+G    F+  
Sbjct: 1218 LAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYP 1276

Query: 531  DNSYSIPFEFGSFAG 575
              ++S+PF+FGSFAG
Sbjct: 1277 ATNFSLPFQFGSFAG 1291

[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
           virus RepID=Q6XPY1_9SECO
          Length = 330

 Score =  175 bits (444), Expect = 2e-42
 Identities = 92/193 (47%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3   QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
           Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+YI+
Sbjct: 91  QLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQ 150

Query: 183 IHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAF 359
           I GI++   LC+ INYKQ FGWF +V+   T+KE  + +PSR++N+  K  +  N VNAF
Sbjct: 151 ILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAF 210

Query: 360 AIMCATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 536
           +IMCATTGM WG    +H      H  +A   K   S   G+ T+  H G+ ++  +   
Sbjct: 211 SIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLAT 265

Query: 537 SYSIPFEFGSFAG 575
           S  IPFE GSFAG
Sbjct: 266 SQVIPFEIGSFAG 278

[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
            RepID=Q6JX06_9SECO
          Length = 1350

 Score =  175 bits (444), Expect = 2e-42
 Identities = 92/193 (47%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
 Frame = +3

Query: 3    QTGQMPHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIR 182
            Q  QMPH D+  G +  L+IQSPFY+TAN G   A FWV P+SSPMAPE +ES  E+YI+
Sbjct: 1111 QLCQMPHVDVDVGVTASLKIQSPFYATANLGDSDAAFWVTPMSSPMAPEAIESALEYYIQ 1170

Query: 183  IHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAF 359
            I GI++   LC+ INYKQ FGWF +V+   T+KE  + +PSR++N+  K  +  N VNAF
Sbjct: 1171 ILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAF 1230

Query: 360  AIMCATTGMHWGK-CIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 536
            +IMCATTGM WG    +H      H  +A   K   S   G+ T+  H G+ ++  +   
Sbjct: 1231 SIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLAT 1285

Query: 537  SYSIPFEFGSFAG 575
            S  IPFE GSFAG
Sbjct: 1286 SQVIPFEIGSFAG 1298

[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
           RepID=Q1T7B1_CNSV
          Length = 569

 Score =  119 bits (299), Expect = 1e-25
 Identities = 60/187 (32%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
 Frame = +3

Query: 21  HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 200
           H D   G + +L I+  FY+++ +G  GA   +  L SPM+P  +++ F+   +I G   
Sbjct: 284 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQITCLCSPMSPNAIKAPFDMVFKIKGFTP 343

Query: 201 QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 380
              +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 344 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 403

Query: 381 GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSYSIPF 554
            MH+G  I+HF+W  +     A+   G ++   G G ++ ++ G  R FSIY+   ++P 
Sbjct: 404 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEGKATVPL 463

Query: 555 EFGSFAG 575
           E G+FAG
Sbjct: 464 ELGTFAG 470

[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
           RepID=UPI0000164A26
          Length = 564

 Score =  117 bits (294), Expect = 5e-25
 Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
 Frame = +3

Query: 21  HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 200
           H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G   
Sbjct: 272 HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 331

Query: 201 QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 380
              +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 332 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 391

Query: 381 GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSYSIPF 554
            MH+G  I+HF+W  +     A+   G ++   G G ++ ++ G  R  SIY+   ++P 
Sbjct: 392 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 451

Query: 555 EFGSFAG 575
           E G+FAG
Sbjct: 452 ELGTFAG 458

[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
          Length = 1240

 Score =  117 bits (294), Expect = 5e-25
 Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 2/187 (1%)
 Frame = +3

Query: 21   HCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIHGIDS 200
            H D   G + +L I+  FY+++ +G  GA   V  L SPM+P  +++ F+   +I G   
Sbjct: 955  HVDTDTGVAFDLPIKDAFYASSVYGDSGAVIQVTCLCSPMSPNAIKAPFDMIFKIRGFTP 1014

Query: 201  QPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIMCATT 380
               +C+ IN+ QRFGWF V+P  +    ++ +    ++L  + +  T + NAF  MC T+
Sbjct: 1015 DAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFLQMCQTS 1074

Query: 381  GMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSYSIPF 554
             MH+G  I+HF+W  +     A+   G ++   G G ++ ++ G  R  SIY+   ++P 
Sbjct: 1075 TMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEGRATVPL 1134

Query: 555  EFGSFAG 575
            E G+FAG
Sbjct: 1135 ELGTFAG 1141

[14][TOP]
>UniRef100_Q8B5P8 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P8_TRSV
          Length = 515

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 5/191 (2%)
 Frame = +3

Query: 18  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 191
           PH  +   G  E+ I++ F+S A       +  ++PLS P+AP+     +EF + I+   
Sbjct: 282 PHQIMHGDGQFEIAIKTRFHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWR 341

Query: 192 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 365
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401

Query: 366 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSY 542
           + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R++ +     
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459

Query: 543 SIPFEFGSFAG 575
            IP   GS+AG
Sbjct: 460 EIPIFLGSYAG 470

[15][TOP]
>UniRef100_Q88894 Capsid protein n=1 Tax=Tobacco ringspot virus RepID=CAPSD_TRSV
          Length = 515

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
 Frame = +3

Query: 18  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 191
           PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I+   
Sbjct: 282 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHINTWR 341

Query: 192 IDSQPDLCKQINYKQRFGWFM---VKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 362
            DSQ       +  + + WF    +KP+         +P  + +   K    T   N  +
Sbjct: 342 PDSQVH-PPMFSSSELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLS 400

Query: 363 IMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNS 539
            + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R++ +    
Sbjct: 401 WLVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTE 458

Query: 540 YSIPFEFGSFAG 575
             IP   GS+AG
Sbjct: 459 AEIPIFLGSYAG 470

[16][TOP]
>UniRef100_Q8B5P7 Coat protein n=1 Tax=Tobacco ringspot virus RepID=Q8B5P7_TRSV
          Length = 515

 Score = 62.0 bits (149), Expect = 3e-08
 Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 5/191 (2%)
 Frame = +3

Query: 18  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 191
           PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I    
Sbjct: 282 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 341

Query: 192 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 365
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401

Query: 366 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSY 542
           + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R++ +     
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459

Query: 543 SIPFEFGSFAG 575
            IP   GS+AG
Sbjct: 460 EIPIFLGSYAG 470

[17][TOP]
>UniRef100_UPI00003E1862 capsid protein n=1 Tax=Tobacco ringspot virus RepID=UPI00003E1862
          Length = 513

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 5/191 (2%)
 Frame = +3

Query: 18  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 191
           PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I    
Sbjct: 280 PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 339

Query: 192 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 365
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 340 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 399

Query: 366 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSY 542
           + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R++ +     
Sbjct: 400 LVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 457

Query: 543 SIPFEFGSFAG 575
            IP   GS+AG
Sbjct: 458 EIPIFLGSYAG 468

[18][TOP]
>UniRef100_Q6UR06 Coat protein n=1 Tax=Tobacco ringspot virus RepID=POL2_TRSV
          Length = 1101

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 5/191 (2%)
 Frame = +3

Query: 18   PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 191
            PH  +   G  E+ I++  +S A       +  ++PLS P+AP+     +EF + I    
Sbjct: 868  PHQIMHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 927

Query: 192  IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 365
             DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 928  PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 987

Query: 366  MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSY 542
            + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R++ +     
Sbjct: 988  LVAATGWHYGE--VDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 1045

Query: 543  SIPFEFGSFAG 575
             IP   GS+AG
Sbjct: 1046 EIPIFLGSYAG 1056

[19][TOP]
>UniRef100_Q5L492 Coat protein (Fragment) n=1 Tax=Tobacco ringspot virus
           RepID=Q5L492_TRSV
          Length = 515

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 5/191 (2%)
 Frame = +3

Query: 18  PHCDIVEGGSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH--G 191
           PH  +   G  E+  ++  +S++       +  ++PLS P+AP+     +EF + I    
Sbjct: 282 PHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWR 341

Query: 192 IDSQ--PDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAI 365
            DSQ  P +         F    +KP+         +P  + +   K    T   N  + 
Sbjct: 342 PDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSW 401

Query: 366 MCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDNSY 542
           + A TG H+G+  V    +W  + +A   +G++S  T       ++ G+ R++ +     
Sbjct: 402 LVAATGWHYGE--VDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEA 459

Query: 543 SIPFEFGSFAG 575
            IP   GS+AG
Sbjct: 460 EIPIFLGSYAG 470

[20][TOP]
>UniRef100_Q9IV56 Polyprotein n=1 Tax=Olive latent ringspot virus RepID=Q9IV56_9SECO
          Length = 1145

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 55/194 (28%), Positives = 84/194 (43%), Gaps = 11/194 (5%)
 Frame = +3

Query: 21   HCDIVEGGSGELRIQSPF------YSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYI- 179
            H  +  GG+    + SPF      Y +    S G + +V  +  P+AP    +K E+++ 
Sbjct: 908  HITLEGGGNFSFPLDSPFSSAPTRYVSTADSSSGCELYVDTICGPIAPADSVTKLEYFLH 967

Query: 180  --RIHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFV- 350
              R+ G  + P+L  +I      G    +     KE  + +P R     I   DCT  + 
Sbjct: 968  FDRLEGTMTAPNLVAEI------GSLWCRVTSFLKE-DVDIPIRARIYDIAAKDCTLELA 1020

Query: 351  -NAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSI 527
             N F+ M A TG   G+  V  + +W  N+EASK+KG++ F        V Y    V S 
Sbjct: 1021 TNPFSKMIAATGFLEGQ--VTLSVSWSTNVEASKIKGHIIF--------VVYDADLVNSF 1070

Query: 528  YDNSYSIPFEFGSF 569
               S  +P   GSF
Sbjct: 1071 DGASTVVPMAKGSF 1084

[21][TOP]
>UniRef100_Q9QRA5 Coat protein (Fragment) n=1 Tax=Tomato ringspot virus
           RepID=Q9QRA5_9SECO
          Length = 562

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
 Frame = +3

Query: 12  QMPHCDIVEG-GSGELRIQSPFYSTANFGSEGAQFWVIPLSSPMAPEKVESKFEFYIRIH 188
           Q PH  + +G G+  L I +PF + A+F  +  +  +  ++ P +P   ++KF F     
Sbjct: 278 QRPHFILKDGQGAFSLPISTPF-AAASFLEDMLRLEIFAIAGPFSPRDNKAKFHFMCYFD 336

Query: 189 GIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFAIM 368
            I+    + + I  +Q F W + +    D +++   P+R+ +++    D     +  +++
Sbjct: 337 HIELDEQVPRTIAGEQLFNWCVFQNFKID-DWRYEWPARLPDILDDKSDVLLRQHPLSLL 395

Query: 369 CATTGMHWGKCIVHFTWAWKHNIEASKMKGNLS--FGTGMGTKDVHYGETRVFSIYDNSY 542
            ++TG   G+    F + W  N  A  MKG+ S     G G +++    T    +     
Sbjct: 396 ISSTGFFTGR--ASFVFQWGLNANAGNMKGSFSARLAFGKGVEEIEQTSTVHPLVGACEA 453

Query: 543 SIPFEFGSFAG 575
            IP EF +F G
Sbjct: 454 RIPVEFKTFTG 464