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[1][TOP]
>UniRef100_Q64959 ORF protein (Fragment) n=1 Tax=Artichoke italian latent virus
RepID=Q64959_9SECO
Length = 510
Score = 235 bits (600), Expect = 2e-60
Identities = 110/186 (59%), Positives = 133/186 (71%), Gaps = 4/186 (2%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKP-EGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAF 177
I GID PDLC+QINYKQRFGWFM+ P + T E +PSR+ N+ +K C NF NAF
Sbjct: 325 ILGIDVIPDLCRQINYKQRFGWFMISPSDKTTTELDFKIPSRIGNIGVKNTKCVNFTNAF 384
Query: 178 AIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGT---GMGTKDVHYGETRVFSIY 348
AIMCATTGMHWG+CI+HFTW+W N EA K +S + + + G R +Y
Sbjct: 385 AIMCATTGMHWGRCILHFTWSWHRNTEAGKNAREISQSRLEWVIVLQHIILG-IRGILVY 443
Query: 349 DNSYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSA 528
DN+YSIPFEFGSFAGPV SGG P EAENW+++ +TSW WIH++ SIEVLPGF+FYGRSA
Sbjct: 444 DNAYSIPFEFGSFAGPVISGGTPNEAENWVRVQSTSWQWIHAVTVSIEVLPGFRFYGRSA 503
Query: 529 GPMLKP 546
GPM P
Sbjct: 504 GPMTIP 509
[2][TOP]
>UniRef100_UPI0000163D16 coat protein n=1 Tax=Grapevine chrome mosaic virus
RepID=UPI0000163D16
Length = 514
Score = 205 bits (522), Expect = 2e-51
Identities = 95/187 (50%), Positives = 129/187 (68%), Gaps = 5/187 (2%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWF-MVKPEGT--DKEFQMFVPSRVSNLVIKGVDCTNFVN 171
I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+VN
Sbjct: 327 ILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVN 386
Query: 172 AFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSI 345
AFAIMCATTGMH GKCI+HF+W ++G++SF +GMG + H+GE +
Sbjct: 387 AFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGP 446
Query: 346 YDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRS 525
+S ++PFEFGSFAGPVTSGG PF +ENW+++ T W+W+ S+ I+VLPGF+FYGRS
Sbjct: 447 LSSSLAVPFEFGSFAGPVTSGGTPFTSENWLRVETAHWDWLTSLTVDIQVLPGFRFYGRS 506
Query: 526 AGPMLKP 546
AGP+ P
Sbjct: 507 AGPLTIP 513
[3][TOP]
>UniRef100_P13026 Coat protein n=1 Tax=Grapevine chrome mosaic virus RepID=POL2_GCMV
Length = 1324
Score = 205 bits (522), Expect = 2e-51
Identities = 95/187 (50%), Positives = 129/187 (68%), Gaps = 5/187 (2%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWF-MVKPEGT--DKEFQMFVPSRVSNLVIKGVDCTNFVN 171
I GID+ P +C+QINY QRF WF +++P K ++ +PSRV N+ K TN+VN
Sbjct: 1137 ILGIDADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVN 1196
Query: 172 AFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSI 345
AFAIMCATTGMH GKCI+HF+W ++G++SF +GMG + H+GE +
Sbjct: 1197 AFAIMCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGP 1256
Query: 346 YDNSYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRS 525
+S ++PFEFGSFAGPVTSGG PF +ENW+++ T W+W+ S+ I+VLPGF+FYGRS
Sbjct: 1257 LSSSLAVPFEFGSFAGPVTSGGTPFTSENWLRVETAHWDWLTSLTVDIQVLPGFRFYGRS 1316
Query: 526 AGPMLKP 546
AGP+ P
Sbjct: 1317 AGPLTIP 1323
[4][TOP]
>UniRef100_UPI0000163DFE capsid protein n=1 Tax=Beet ringspot virus RepID=UPI0000163DFE
Length = 520
Score = 204 bits (519), Expect = 4e-51
Identities = 96/184 (52%), Positives = 126/184 (68%), Gaps = 2/184 (1%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKE--FQMFVPSRVSNLVIKGVDCTNFVNA 174
I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TNFVNA
Sbjct: 326 IKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNA 385
Query: 175 FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 354
AI+CATTGMH G C +HF+W W H E K G L F GMG + H G+T ++ N
Sbjct: 386 LAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSN 444
Query: 355 SYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSAGP 534
++S+PF+FGSFAGP+TSGGK EAENWI+I + ++W+ S+ SIEV GFKFYGRSAGP
Sbjct: 445 THSVPFQFGSFAGPITSGGKADEAENWIEIQSPDFSWVASLHVSIEVHEGFKFYGRSAGP 504
Query: 535 MLKP 546
+ P
Sbjct: 505 LTIP 508
[5][TOP]
>UniRef100_P14547 Coat protein n=1 Tax=Beet ringspot virus RepID=POL2_BRSV
Length = 1357
Score = 204 bits (519), Expect = 4e-51
Identities = 96/184 (52%), Positives = 126/184 (68%), Gaps = 2/184 (1%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKE--FQMFVPSRVSNLVIKGVDCTNFVNA 174
I GI++ P LC++INYKQRF W +++ K ++ +PSR+ NL K V TNFVNA
Sbjct: 1163 IKGIEANPGLCREINYKQRFAWCLLECLDNSKASPIKVKIPSRIGNLSSKHVKVTNFVNA 1222
Query: 175 FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 354
AI+CATTGMH G C +HF+W W H E K G L F GMG + H G+T ++ N
Sbjct: 1223 LAILCATTGMHHGNCTIHFSWLW-HPAELGKQLGRLKFVQGMGINNEHIGDTMCYNSLSN 1281
Query: 355 SYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSAGP 534
++S+PF+FGSFAGP+TSGGK EAENWI+I + ++W+ S+ SIEV GFKFYGRSAGP
Sbjct: 1282 THSVPFQFGSFAGPITSGGKADEAENWIEIQSPDFSWVASLHVSIEVHEGFKFYGRSAGP 1341
Query: 535 MLKP 546
+ P
Sbjct: 1342 LTIP 1345
[6][TOP]
>UniRef100_Q88483 P2 protein n=1 Tax=Tomato black ring virus RepID=Q88483_9SECO
Length = 1344
Score = 186 bits (473), Expect = 8e-46
Identities = 91/186 (48%), Positives = 121/186 (65%), Gaps = 4/186 (2%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVK--PEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNA 174
IHGI+++ LC++INY Q F WFM++ T + +P+R++NL K V TNFVNA
Sbjct: 1159 IHGINAKAHLCREINYNQHFAWFMLEHLDTNTTGAVSLKIPARMANLTSKEVQVTNFVNA 1218
Query: 175 FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSIY 348
AIMCATTGMH+GKC +HF+W W + + G +S TGMG V H+G F
Sbjct: 1219 LAIMCATTGMHFGKCTLHFSWGWYRG-KLADQSGAVSLQTGMGRAAVAEHFGGKHNFCYP 1277
Query: 349 DNSYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSA 528
S+S+PF+FGSFAGP++ GG P AENWI++ + WI S+ SIEV GF+FYGRSA
Sbjct: 1278 ATSFSLPFQFGSFAGPISCGGAPMAAENWIELIIPNMKWITSLTVSIEVHDGFQFYGRSA 1337
Query: 529 GPMLKP 546
GP+ P
Sbjct: 1338 GPLTIP 1343
[7][TOP]
>UniRef100_UPI000016782B coat protein n=1 Tax=Tomato black ring virus RepID=UPI000016782B
Length = 511
Score = 186 bits (471), Expect = 1e-45
Identities = 89/186 (47%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKE--FQMFVPSRVSNLVIKGVDCTNFVNA 174
IHGI + +LC++INY Q F WFM++ T+ + +P+R++NL K V TNFVNA
Sbjct: 326 IHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNA 385
Query: 175 FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSIY 348
AIMCATTGMH+GKC +HF+W W + + G S TGMG V H+G F+
Sbjct: 386 LAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYP 444
Query: 349 DNSYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSA 528
++S+PF+FGSFAGP++ GG+P AENW+++ + WI S+ SIEV GF+FYGRSA
Sbjct: 445 ATNFSLPFQFGSFAGPISCGGEPMAAENWVRLQIPNMKWITSLTVSIEVHDGFQFYGRSA 504
Query: 529 GPMLKP 546
GP+ P
Sbjct: 505 GPLTIP 510
[8][TOP]
>UniRef100_Q8B8X2 Polyprotein n=1 Tax=Tomato black ring virus RepID=Q8B8X2_9SECO
Length = 1343
Score = 186 bits (471), Expect = 1e-45
Identities = 89/186 (47%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKE--FQMFVPSRVSNLVIKGVDCTNFVNA 174
IHGI + +LC++INY Q F WFM++ T+ + +P+R++NL K V TNFVNA
Sbjct: 1158 IHGIKVKANLCREINYNQHFAWFMLEHLDTNTTGMVSLKIPARMANLTSKEVQITNFVNA 1217
Query: 175 FAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLSFGTGMGTKDV--HYGETRVFSIY 348
AIMCATTGMH+GKC +HF+W W + + G S TGMG V H+G F+
Sbjct: 1218 LAIMCATTGMHFGKCTLHFSWNWFRG-KLADQSGVFSIQTGMGKSTVAEHFGGRHSFNYP 1276
Query: 349 DNSYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSA 528
++S+PF+FGSFAGP++ GG+P AENW+++ + WI S+ SIEV GF+FYGRSA
Sbjct: 1277 ATNFSLPFQFGSFAGPISCGGEPMAAENWVRLQIPNMKWITSLTVSIEVHDGFQFYGRSA 1336
Query: 529 GPMLKP 546
GP+ P
Sbjct: 1337 GPLTIP 1342
[9][TOP]
>UniRef100_Q6XPY1 Viral coat protein (Fragment) n=1 Tax=Grapevine Anatolian ringspot
virus RepID=Q6XPY1_9SECO
Length = 330
Score = 175 bits (444), Expect = 2e-42
Identities = 90/184 (48%), Positives = 118/184 (64%), Gaps = 2/184 (1%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAF 177
I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K + N VNAF
Sbjct: 151 ILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAF 210
Query: 178 AIMCATTGMHWGKCI-VHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 354
+IMCATTGM WG +H H +A K S G+ T+ H G+ ++ +
Sbjct: 211 SIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLAT 265
Query: 355 SYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSAGP 534
S IPFE GSFAGPVTSGG PFE+ENWI++ + W+W S+ SIEVL GF+FYGRSAGP
Sbjct: 266 SQVIPFEIGSFAGPVTSGGTPFESENWIRVWSKHWDWFTSLSVSIEVLEGFRFYGRSAGP 325
Query: 535 MLKP 546
M P
Sbjct: 326 MTIP 329
[10][TOP]
>UniRef100_Q6JX06 P2 protein n=1 Tax=Grapevine Anatolian ringspot virus
RepID=Q6JX06_9SECO
Length = 1350
Score = 175 bits (444), Expect = 2e-42
Identities = 90/184 (48%), Positives = 118/184 (64%), Gaps = 2/184 (1%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWF-MVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAF 177
I GI++ LC+ INYKQ FGWF +V+ T+KE + +PSR++N+ K + N VNAF
Sbjct: 1171 ILGIEADTPLCRAINYKQAFGWFTLVRRSTTNKEIALKIPSRIANIEYKEAEVINHVNAF 1230
Query: 178 AIMCATTGMHWGKCI-VHFTWAWKHNIEASKMKGNLSFGTGMGTKDVHYGETRVFSIYDN 354
+IMCATTGM WG +H H +A K S G+ T+ H G+ ++ +
Sbjct: 1231 SIMCATTGMQWGSPFALHLD---SHMTQADDQKICESHSAGITTE--HIGDIKMCGVLAT 1285
Query: 355 SYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSAGP 534
S IPFE GSFAGPVTSGG PFE+ENWI++ + W+W S+ SIEVL GF+FYGRSAGP
Sbjct: 1286 SQVIPFEIGSFAGPVTSGGTPFESENWIRVWSKHWDWFTSLSVSIEVLEGFRFYGRSAGP 1345
Query: 535 MLKP 546
M P
Sbjct: 1346 MTIP 1349
[11][TOP]
>UniRef100_Q1T7B1 Coat protein (Fragment) n=1 Tax=Cycas necrotic stunt virus
RepID=Q1T7B1_CNSV
Length = 569
Score = 127 bits (320), Expect = 5e-28
Identities = 66/182 (36%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 180
I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T + NAF
Sbjct: 338 IKGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFL 397
Query: 181 IMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDN 354
MC T+ MH+G I+HF+W + A+ G ++ G G ++ ++ G R FSIY+
Sbjct: 398 QMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNFSIYEG 457
Query: 355 SYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSAGP 534
++P E G+FAGP F+ NWI+ T I SI +IEVLPGF FYGR+ P
Sbjct: 458 KATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRNISSIFCAIEVLPGFSFYGRTGSP 517
Query: 535 ML 540
L
Sbjct: 518 RL 519
[12][TOP]
>UniRef100_UPI0000164A26 capsid protein n=1 Tax=Cycas necrotic stunt virus
RepID=UPI0000164A26
Length = 564
Score = 125 bits (314), Expect = 2e-27
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 180
I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T + NAF
Sbjct: 326 IRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFL 385
Query: 181 IMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDN 354
MC T+ MH+G I+HF+W + A+ G ++ G G ++ ++ G R SIY+
Sbjct: 386 QMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEG 445
Query: 355 SYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSAGP 534
++P E G+FAGP F+ NWI+ T I SI +IEVLPGF FYGR+ P
Sbjct: 446 RATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRNISSIFCAIEVLPGFSFYGRTGSP 505
Query: 535 ML 540
L
Sbjct: 506 RL 507
[13][TOP]
>UniRef100_Q8QVU9 Coat protein n=1 Tax=Cycas necrotic stunt virus RepID=POL2_CNSV
Length = 1240
Score = 125 bits (314), Expect = 2e-27
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 2/182 (1%)
Frame = +1
Query: 1 IHGIDSQPDLCKQINYKQRFGWFMVKPEGTDKEFQMFVPSRVSNLVIKGVDCTNFVNAFA 180
I G +C+ IN+ QRFGWF V+P + ++ + ++L + + T + NAF
Sbjct: 1009 IRGFTPDAPMCRTINFTQRFGWFAVEPTTSTGAIKLKIWPVSNHLESEDMKVTGYTNAFL 1068
Query: 181 IMCATTGMHWGKCIVHFTWA-WKHNIEASKMKGNLSFGTGMGTKDVHY-GETRVFSIYDN 354
MC T+ MH+G I+HF+W + A+ G ++ G G ++ ++ G R SIY+
Sbjct: 1069 QMCQTSTMHFGSVIIHFSWTLFGGTTNAATAGGVVTIAEGFGPEEENFRGHCRNLSIYEG 1128
Query: 355 SYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTSWNWIHSIMASIEVLPGFKFYGRSAGP 534
++P E G+FAGP F+ NWI+ T I SI +IEVLPGF FYGR+ P
Sbjct: 1129 RATVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRNISSIFCAIEVLPGFSFYGRTGSP 1188
Query: 535 ML 540
L
Sbjct: 1189 RL 1190
[14][TOP]
>UniRef100_Q9QAH5 Putative coat protein (Fragment) n=1 Tax=Raspberry ringspot virus
RepID=Q9QAH5_9SECO
Length = 514
Score = 54.3 bits (129), Expect = 6e-06
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Frame = +1
Query: 112 VPSRVSNLVIKG--VDCTNFVNAFAIMCATTGMHWGKCIVHFTWAWKHNIEASKMKGNLS 285
+P ++ N+V D TN+VN +++ + TG+H G ++H TW N+ + KG L
Sbjct: 373 IPGKIENMVAVAGNYDVTNYVNPNSLLFSVTGLHGGVILLHITWC--PNVILGEAKGTLK 430
Query: 286 FGTGM--GTKDVHYGETRVFSIYD-NSYSIPFEFGSFAGPVTSGGKPFEAENWIKIHTTS 456
+ + T + +G+ I D + +++ G+F G T G E E + I++++
Sbjct: 431 YMQYLYHTTTENFFGDQATLGIIDQDGFTVDIACGNFFG-ATRVGLTGEIER-LGIYSSN 488
Query: 457 WNWIHSIMASIEVLPGFKFYG 519
N I I S E+L FYG
Sbjct: 489 ANSISEIRVSFEIL-SMNFYG 508