BB902853 ( RCE00554 )

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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
           virus China/Mar2007 RepID=A8W7G1_9VIRU
          Length = 723

 Score =  365 bits (937), Expect = 1e-99
 Identities = 171/191 (89%), Positives = 179/191 (93%)
 Frame = +2

Query: 2   KTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLT 181
           K++LTD  +  YI +AN FFNDYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIELMLT
Sbjct: 285 KSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLT 344

Query: 182 FPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYT 361
           FPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYT
Sbjct: 345 FPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYT 404

Query: 362 DFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRR 541
           DFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRR
Sbjct: 405 DFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRR 464

Query: 542 TCCGVPSGLYN 574
           T CGVPSGLYN
Sbjct: 465 THCGVPSGLYN 475

[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
           partitivirus 1-W8 RepID=Q50LH7_9VIRU
          Length = 709

 Score =  265 bits (677), Expect = 2e-69
 Identities = 123/177 (69%), Positives = 143/177 (80%), Gaps = 4/177 (2%)
 Frame = +2

Query: 56  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCI 223
           F   + T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P      CI
Sbjct: 288 FMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCI 347

Query: 224 MYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQ 403
           MY  ETIRGSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQ
Sbjct: 348 MYSFETIRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQ 407

Query: 404 PTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
           PTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+  DG+AY R+  GVPSGL N
Sbjct: 408 PTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLN 464

[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
           partitivirus V1-1 RepID=Q6BE43_9VIRU
          Length = 706

 Score =  259 bits (662), Expect = 1e-67
 Identities = 118/186 (63%), Positives = 141/186 (75%)
 Frame = +2

Query: 17  DSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTI 196
           D D          FF   PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL +
Sbjct: 275 DFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLV 334

Query: 197 QARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRS 376
            AR P CCIMYGLETIRGSN +I+  A+ + ++F++DWS YDQRLPR ITD+YYTDFL S
Sbjct: 335 MARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLES 394

Query: 377 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 556
           LI+IN GYQPT +Y  YPDL    ++ RM NLLHFLHTWYNNM ++  DG+AY R  CGV
Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGV 454

Query: 557 PSGLYN 574
           PSGL+N
Sbjct: 455 PSGLFN 460

[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
           RepID=Q5GHF1_9VIRU
          Length = 706

 Score =  258 bits (659), Expect = 2e-67
 Identities = 116/174 (66%), Positives = 142/174 (81%)
 Frame = +2

Query: 53  SFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYG 232
           SF    PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK  CCIMYG
Sbjct: 286 SFILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYG 345

Query: 233 LETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 412
            ETIRGSNR I++IA  + +FF++DWS +DQRLPRVITDI+++DFL  +IVI+HGYQPTY
Sbjct: 346 YETIRGSNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTY 405

Query: 413 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
           +YP+YPDL   K++ RMDN+L FLHTWYNN+ F+  DG+AY RTC GVPSGL N
Sbjct: 406 DYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLN 459

[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=D0EIN9_9VIRU
          Length = 502

 Score =  251 bits (642), Expect = 2e-65
 Identities = 112/178 (62%), Positives = 141/178 (79%)
 Frame = +2

Query: 41  DEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC 220
           D   SF    P +LFTRNHIS RDG LK RPVYA+DD+FI +E  +TFPL + ARK  CC
Sbjct: 282 DALRSFILKRPVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECC 341

Query: 221 IMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGY 400
           IMYG ETIRGSNR I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL  +IVI+HGY
Sbjct: 342 IMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGY 401

Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
           QPT++YP+YPDL   K++ RM N+L FLHTWYNN+ ++  DG+AY RTC GVPSGL N
Sbjct: 402 QPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 459

[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
           RepID=Q9YX75_9VIRU
          Length = 673

 Score =  233 bits (594), Expect = 8e-60
 Identities = 105/173 (60%), Positives = 134/173 (77%)
 Frame = +2

Query: 56  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
           FF   PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP  + ARKP CCIMYGL
Sbjct: 284 FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGL 343

Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
           ETIRGSN+ +++IA DY +FF++DWS +DQRLP VI  +++T+++  L+V+NHGY PTYE
Sbjct: 344 ETIRGSNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYE 403

Query: 416 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
           YP+YPDL  + +  R+ NL+ FL TWY NM F+  DG++Y R   GVPSG+ N
Sbjct: 404 YPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLN 456

[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
           virus 1 RepID=B2L075_9VIRU
          Length = 185

 Score =  211 bits (537), Expect = 3e-53
 Identities = 91/142 (64%), Positives = 117/142 (82%)
 Frame = +2

Query: 149 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 328
           D+FI +E M+TFPL + ARK  CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1   DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60

Query: 329 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 508
           LPRVITDI++TDFL  +IVI+HGYQPT++YP+YPDL   K++ RM N+L FLHTWYNN+ 
Sbjct: 61  LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120

Query: 509 FLLPDGYAYRRTCCGVPSGLYN 574
           ++  DG+AY RTC GVPSGL N
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLN 142

[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
           virus 717 RepID=Q9Q9X2_9VIRU
          Length = 730

 Score =  203 bits (516), Expect = 9e-51
 Identities = 94/171 (54%), Positives = 125/171 (73%)
 Frame = +2

Query: 56  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
           F   +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGL
Sbjct: 315 FLKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGL 374

Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
           ETIRGSN  ++ +A+ + +F ++DWS YDQRLP  I   ++  +L SL++I+HGY PT E
Sbjct: 375 ETIRGSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSE 434

Query: 416 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGL 568
           Y     ++   ++ R  NL++F  TWY NM FL  DG+A+RR   GVPSG+
Sbjct: 435 YED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGM 484

[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
           hypoxylon virus RepID=Q85055_AHV
          Length = 665

 Score =  148 bits (374), Expect = 3e-34
 Identities = 82/194 (42%), Positives = 111/194 (57%), Gaps = 23/194 (11%)
 Frame = +2

Query: 56  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
           +F   PT L  R+HISKRD  LKVRPVY    I+I IE ML +PL  QARK  CCIMYGL
Sbjct: 249 WFKKVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGL 307

Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP--- 406
           ETIRG    +E+I+  +++F  +DWS +D   P  I++ ++  +L + I+I+HGY     
Sbjct: 308 ETIRGGMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISN 367

Query: 407 --------------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 526
                               + EY T P+        ++ NL+ FL  WY +M F+ PDG
Sbjct: 368 YHDHVHSFSAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDG 425

Query: 527 YAYRRTCCGVPSGL 568
           +AYRRT  GVPSG+
Sbjct: 426 FAYRRTHAGVPSGI 439

[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
           1 RepID=Q5DM90_9VIRU
          Length = 663

 Score =  144 bits (362), Expect = 6e-33
 Identities = 77/192 (40%), Positives = 110/192 (57%), Gaps = 21/192 (10%)
 Frame = +2

Query: 56  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
           +F   PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311

Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
           ETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + 
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371

Query: 416 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYA 532
           Y  +                 +L+E         ++++NLL F++TW+  M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFA 431

Query: 533 YRRTCCGVPSGL 568
           YRRT  GVPSG+
Sbjct: 432 YRRTFAGVPSGI 443

[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6EM35_9VIRU
          Length = 663

 Score =  142 bits (359), Expect = 1e-32
 Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 21/192 (10%)
 Frame = +2

Query: 56  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
           +F   PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYG 
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGF 311

Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
           ETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+I+ GY   + 
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHN 371

Query: 416 YPTY----------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYA 532
           Y  +                 +L+E         ++++NLL F++TW+  M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFA 431

Query: 533 YRRTCCGVPSGL 568
           YRRT  GVPSG+
Sbjct: 432 YRRTFAGVPSGI 443

[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
           partitivirus RepID=Q6X9T6_9VIRU
          Length = 663

 Score =  141 bits (356), Expect = 3e-32
 Identities = 76/192 (39%), Positives = 109/192 (56%), Gaps = 21/192 (10%)
 Frame = +2

Query: 56  FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
           +F   PT L  R+HIS     LKVRPV     IF+ IE ML +PL  Q RK  C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311

Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
           ETIRG    IE +A  +S F  +DWS +DQ +P  + D++Y D++ +LI+++ GY   + 
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371

Query: 416 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYA 532
           Y  +                 +L+E         ++++NLL F++TW+  M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFA 431

Query: 533 YRRTCCGVPSGL 568
           Y RT  GVPSG+
Sbjct: 432 YSRTFAGVPSGI 443

[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
           annosum P-type partitivirus RepID=Q8QY51_9VIRU
          Length = 734

 Score =  112 bits (279), Expect = 3e-23
 Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 31/198 (15%)
 Frame = +2

Query: 71  PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 250
           PT+++ R+ ISK    LKVRPVY    +F+++E MLT  L  Q RKP  CI++  ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339

Query: 251 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 424
               + +I+ +++ F   D+S +DQ  P  I   ++  F+  +I ++ GYQ +  Y    
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399

Query: 425 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 517
           Y   D  K Y  +D                             N+L F+  WY  M F+ 
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458

Query: 518 PDGYAYRRTCCGVPSGLY 571
           PDGY Y R   GVPSG++
Sbjct: 459 PDGYGYVRLLAGVPSGIF 476

[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
          Length = 576

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 241
           Y    F R H+ + D P KVR V+      ++ ELM  +PL +   AR P   +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261

Query: 242 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 409
           + G    +   A D    YST  +LDWS +D+     +    +   +R +     GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321

Query: 410 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
             YP  PD +      R++NL +++      +  +LPDG   +    G+ SG +
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYF 371

[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
           RepID=B2CGP3_9VIRU
          Length = 616

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289

Query: 242 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 400
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344

Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLY 571
            PT+  PT+P  D  K   R++ L  +L T  N      +LPDG  YRR   G+PSGL+
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLF 400

[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
           cryptic virus 1 RepID=D0EP81_9VIRU
          Length = 559

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
           +P LL T+  I K+D P K+R ++     +II E ML +      +  PS   +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233

Query: 242 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 400
             G      ++ RD        +F +LDWS +D+R    ++  I YT   R+ +  + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288

Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
            PT+  PT+P  D  K        L  L   +     +LPDG  YRR   G+PSGL+
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLF 344

[17][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=Q4KUU4_9VIRU
          Length = 616

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
 Frame = +2

Query: 5   TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
            I YT  ++S +    GY PT+  P +P  ++ K      + L  L  W     F    +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381

Query: 515 LPDGYAYRRTCCGVPSGLY 571
           LPDG  YRR   G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400

[18][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=B2M1T3_9VIRU
          Length = 616

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
 Frame = +2

Query: 5   TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
            I YT  ++S +    GY PT+  P +P  ++ K      + L  L  W     F    +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381

Query: 515 LPDGYAYRRTCCGVPSGLY 571
           LPDG  YRR   G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400

[19][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R744_9VIRU
          Length = 616

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
 Frame = +2

Query: 5   TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
            I YT  ++S +    GY PT+  P +P  ++ K      + L  L  W     F    +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381

Query: 515 LPDGYAYRRTCCGVPSGLY 571
           LPDG  YRR   G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400

[20][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R742_9VIRU
          Length = 616

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
 Frame = +2

Query: 5   TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
            I YT  ++S +    GY PT+  P +P  ++ K      + L  L  W     F    +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381

Query: 515 LPDGYAYRRTCCGVPSGLY 571
           LPDG  YRR   G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400

[21][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
           RepID=A3R739_9VIRU
          Length = 616

 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
 Frame = +2

Query: 5   TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
           T+ T  D   Y+   N F   +P LL T+  I K+D P K+R ++     +II + M   
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268

Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
            +   ++    S  +++G ET  G    + Q+        +F +LDWS +D+R    ++ 
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328

Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
            I YT  ++S +    GY PT+  P +P  ++ K      + L  L  W     F    +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381

Query: 515 LPDGYAYRRTCCGVPSGLY 571
           LPDG  YRR   G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400

[22][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
           RepID=Q64FP0_WCCV1
          Length = 616

 Score = 73.6 bits (179), Expect = 1e-11
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
 Frame = +2

Query: 38  IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 205
           +++   FFN +  P LL T+  I K++ P K+R ++     +II E M  +     I+  
Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277

Query: 206 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 364
             +  +++G ET  G         +   I R   +F +LDWS +D+R    ++  I YT 
Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333

Query: 365 FLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYR 538
            +++ +    GY PT+  PT+P   +  +  R++ L  +L T  N      +LPDG  YR
Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYR 389

Query: 539 RTCCGVPSGLY 571
           R   G+PSGL+
Sbjct: 390 RHFAGIPSGLF 400

[23][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
           RepID=B8YNW9_9VIRU
          Length = 616

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 241
           +P LL T+  I K + P K+R ++     +II E ML +     I+    +  +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289

Query: 242 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 400
             G         Y   I     +F +LDWS +D+R    ++  I Y   +RS +  + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344

Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLY 571
            PT+  P +P  +  K   R++ L  +L T  N      +LPDG  YRR   G+PSGL+
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLF 400

[24][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
           virus RepID=C0STM0_9VIRU
          Length = 580

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 244
           YP  + T++ I     P KVR ++ V  + +++E M  +PL    R +    +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258

Query: 245 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 409
            G     N  +        +  SLDWS +D R L  VI D+Y    ++S    N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318

Query: 410 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
            +   YPD   H    ++ NL  ++ T        L DG  ++RT  G+ SG +
Sbjct: 319 VD---YPDSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQF 367

[25][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
           disease-associated mycovirus RepID=Q65A75_9VIRU
          Length = 621

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
           +P LL T+  I K+D P K+R ++     +II + ML +     A+ +P    +++  ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291

Query: 242 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 412
             G   R    +   Y   ++ +LDW  +D++    I D  + D + + +  ++GY PT 
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350

Query: 413 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
           +YP        +   R+  L  +    + +   +LP+G+ Y R   G+PSGL+
Sbjct: 351 DYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLF 403

[26][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
           associated partitivirus RepID=Q65A70_9VIRU
          Length = 621

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
           +P LL T+  I K+D P K+R ++     +II + ML +     A+ +P    +++  ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291

Query: 242 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 412
             G   R    +   Y   ++ +LDW  +D++    I D  + D + + +  ++GY PT 
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350

Query: 413 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
           +YP            R+  L  +    + +   +LP+G+ Y R   G+PSGL+
Sbjct: 351 DYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLF 403

[27][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
           virus II RepID=Q7TDZ9_9VIRU
          Length = 610

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
 Frame = +2

Query: 68  YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 229
           Y    F R HI  K+ G L   KVR V+      +  EL+  +PL   +   +    +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296

Query: 230 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 397
           G ETI G   R    ++    T     +LDWS +D+     +    +T  +R      +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356

Query: 398 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSG 565
           Y PT+ YP  T  D DE  +  R++NL +++      +  L+PDG   R T  G+ SG
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSG 414

[28][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
           Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
          Length = 367

 Score = 61.6 bits (148), Expect = 4e-08
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 241
           +P LL  +  + K D P K+R ++ V  ++II E  + +     I+       +++G ET
Sbjct: 1   FPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWIKLNPGITPMLWGYET 60

Query: 242 IRGSNRYIEQIAR---DYSTFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPT 409
             G    + +      +  T+ ++DWS +D+R    +I  I+     R      +GY PT
Sbjct: 61  FTGGWFRLYRTLHTPGENVTYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPT 118

Query: 410 YEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
            +YP   T+PD        ++  L  +    + +   +LP+G+ Y+R   G+PSGL+
Sbjct: 119 KDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLF 167

[29][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
           1 RepID=Q52UL1_9VIRU
          Length = 573

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
 Frame = +2

Query: 116 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 280
           P K+R V+ V    I  E M  +PL +         +++  ET+ G     N    Q  +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFFWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255

Query: 281 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 460
            + T F+LDWS +D R+   + D    D ++S       Y PT  YPT     +     R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----R 309

Query: 461 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
           + NL +++ T Y +       G  YRR   G+PSG++
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIF 346

[30][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
           partitivirus S RepID=C7ENF4_9VIRU
          Length = 580

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
 Frame = +2

Query: 68  YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLE 238
           Y T L  R H+   +   K+R V+ V  + ++ E M  +PL    +        +++G E
Sbjct: 191 YHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNE 250

Query: 239 TIRGSNRYI---EQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQP 406
            ++G  + +    Q  R   T  SLDWS +D+R L  VI D++     +S     H Y+P
Sbjct: 251 IMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEP 307

Query: 407 TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSG 565
           T  Y      + H+   R++NL  ++     +   L PDG  Y+ T  G+ SG
Sbjct: 308 TIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASG 357

[31][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
           cryptic virus 1 RepID=B7ZGY8_9VIRU
          Length = 587

 Score = 57.8 bits (138), Expect = 6e-07
 Identities = 56/182 (30%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
 Frame = +2

Query: 62  NDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT----IQARKPSCCI 223
           +DY  P     R+ I     P KVR VY    + I  + M  +PL     I  + P   +
Sbjct: 200 DDYLTPMRSHARSAIQPISDPNKVRFVYGYPKVGIFPQAMFFWPLFVYYHITGQSP---L 256

Query: 224 MYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIVI 388
           ++G ET+ G     N  +        +   LDW  +D   L  V  DI    +  S    
Sbjct: 257 LWGYETMTGGWYRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFDC 314

Query: 389 NHGYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSG 565
           +HGYQPT +Y  T  D D      R+ NL  ++          LPDG  +RR+  GVPSG
Sbjct: 315 SHGYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSG 368

Query: 566 LY 571
           L+
Sbjct: 369 LF 370

[32][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
           RepID=Q5XM56_9VIRU
          Length = 573

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
 Frame = +2

Query: 116 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 280
           P K+R V+ V    I  E M ++PL +         +++  ET+ G     N    Q  +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255

Query: 281 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 460
            + T F+LDWS +D R+   + D    D ++S       Y PT   PT     +     R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----R 309

Query: 461 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
           + NL +++ T Y +       G  YRR   G+PSG++
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIF 346

[33][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
           partitivirus RepID=A2VA07_9VIRU
          Length = 132

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
 Frame = +2

Query: 74  TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 244
           T L +R+H+ + D P K+R V+ V  + +++E M  + +    +        +++G ETI
Sbjct: 8   TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67

Query: 245 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 409
           RG   + I Q+ ++  S+  S DWS +D + L  VI D++  D  +S    N GY+P+
Sbjct: 68  RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123

[34][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
           mycovirus RepID=Q8B0U3_9VIRU
          Length = 598

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
 Frame = +2

Query: 122 KVRPVYAVDDIFIIIELMLTFPLTI--QARKPSCCIMYGLETIRGS--NRYIEQIARD-- 283
           K+R V+ V    ++   M  +PL       + +  +++G ETI G   N Y+E I     
Sbjct: 224 KIRVVFGVSKRHVLPSAMFFWPLFFFYLKNRETSPLLWGNETILGGGLNLYMECIIPRLY 283

Query: 284 YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 460
           +STF  +DWSS+D R L  +I    + ++ R+     +GY PT +Y        H     
Sbjct: 284 FSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH----- 337

Query: 461 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
           ++ L +++      M   LPDG  Y+R   G+PSGL+
Sbjct: 338 LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLF 374