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[1][TOP]
>UniRef100_A8W7G1 Putative RNA-dependent RNA polymerase n=1 Tax=Primula malacoides
virus China/Mar2007 RepID=A8W7G1_9VIRU
Length = 723
Score = 365 bits (937), Expect = 1e-99
Identities = 171/191 (89%), Positives = 179/191 (93%)
Frame = +2
Query: 2 KTELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLT 181
K++LTD + YI +AN FFNDYPTLLFTRNHISKR G LKVRPVYAVDDIFIIIELMLT
Sbjct: 285 KSDLTDEQINLYISKANQFFNDYPTLLFTRNHISKRSGTLKVRPVYAVDDIFIIIELMLT 344
Query: 182 FPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYT 361
FPLTIQARKPSCCIMYGLETIRGSN YI+++AR YSTFFSLDWSSYDQRLPRVITDIYYT
Sbjct: 345 FPLTIQARKPSCCIMYGLETIRGSNHYIDRLARPYSTFFSLDWSSYDQRLPRVITDIYYT 404
Query: 362 DFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRR 541
DFLRSLIVINHGYQPTYEYPTYPDLDEHKLY RMDNLL+FLHTWYNNMTFLLPDGYAYRR
Sbjct: 405 DFLRSLIVINHGYQPTYEYPTYPDLDEHKLYSRMDNLLYFLHTWYNNMTFLLPDGYAYRR 464
Query: 542 TCCGVPSGLYN 574
T CGVPSGLYN
Sbjct: 465 THCGVPSGLYN 475
[2][TOP]
>UniRef100_Q50LH7 Putative RNA-dependent RNA polymerase n=1 Tax=Rosellinia necatrix
partitivirus 1-W8 RepID=Q50LH7_9VIRU
Length = 709
Score = 265 bits (677), Expect = 2e-69
Identities = 123/177 (69%), Positives = 143/177 (80%), Gaps = 4/177 (2%)
Frame = +2
Query: 56 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKP----SCCI 223
F + T+LFTRNHIS RDG LK RPVYAVDD FI+ ELM++FPL + AR P CI
Sbjct: 288 FMQKHVTMLFTRNHISDRDGFLKQRPVYAVDDFFILCELMISFPLHVMARYPINGIKSCI 347
Query: 224 MYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQ 403
MY ETIRGSNRY++ IARD+ +FF++DWSS+DQR+PRVITDI++TDFLR LIVINHGYQ
Sbjct: 348 MYSFETIRGSNRYLDSIARDFISFFTIDWSSFDQRVPRVITDIFWTDFLRQLIVINHGYQ 407
Query: 404 PTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
PTYEYP YPDL EH LY RM+NLLHFLHTWYNNM F+ DG+AY R+ GVPSGL N
Sbjct: 408 PTYEYPAYPDLSEHDLYKRMNNLLHFLHTWYNNMVFVTADGFAYLRSAAGVPSGLLN 464
[3][TOP]
>UniRef100_Q6BE43 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa
partitivirus V1-1 RepID=Q6BE43_9VIRU
Length = 706
Score = 259 bits (662), Expect = 1e-67
Identities = 118/186 (63%), Positives = 141/186 (75%)
Frame = +2
Query: 17 DSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTI 196
D D FF PT+LFTRNHIS RDG LK RPVYAVDD+F+I+E+MLTFPL +
Sbjct: 275 DFDSSSIFSRMRFFFLTRPTMLFTRNHISDRDGNLKQRPVYAVDDLFLILEVMLTFPLLV 334
Query: 197 QARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRS 376
AR P CCIMYGLETIRGSN +I+ A+ + ++F++DWS YDQRLPR ITD+YYTDFL S
Sbjct: 335 MARLPECCIMYGLETIRGSNHWIDSTAKRFRSYFTIDWSQYDQRLPRCITDLYYTDFLES 394
Query: 377 LIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGV 556
LI+IN GYQPT +Y YPDL ++ RM NLLHFLHTWYNNM ++ DG+AY R CGV
Sbjct: 395 LIIINFGYQPTADYADYPDLTPDMMFTRMTNLLHFLHTWYNNMVYVTADGFAYIRKFCGV 454
Query: 557 PSGLYN 574
PSGL+N
Sbjct: 455 PSGLFN 460
[4][TOP]
>UniRef100_Q5GHF1 RNA-dependent RNA polymerase n=1 Tax=Pleurotus ostreatus virus 1
RepID=Q5GHF1_9VIRU
Length = 706
Score = 258 bits (659), Expect = 2e-67
Identities = 116/174 (66%), Positives = 142/174 (81%)
Frame = +2
Query: 53 SFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYG 232
SF PT+LFTRNHIS RDG LK RPVYA+DD+FI +E M+TFPL + ARK CCIMYG
Sbjct: 286 SFILKRPTMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESMITFPLHVMARKIECCIMYG 345
Query: 233 LETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 412
ETIRGSNR I++IA + +FF++DWS +DQRLPRVITDI+++DFL +IVI+HGYQPTY
Sbjct: 346 YETIRGSNRQIDKIASSFRSFFTIDWSGFDQRLPRVITDIFWSDFLERMIVISHGYQPTY 405
Query: 413 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
+YP+YPDL K++ RMDN+L FLHTWYNN+ F+ DG+AY RTC GVPSGL N
Sbjct: 406 DYPSYPDLTPDKMFQRMDNILFFLHTWYNNLVFVTADGFAYIRTCAGVPSGLLN 459
[5][TOP]
>UniRef100_D0EIN9 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=D0EIN9_9VIRU
Length = 502
Score = 251 bits (642), Expect = 2e-65
Identities = 112/178 (62%), Positives = 141/178 (79%)
Frame = +2
Query: 41 DEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCC 220
D SF P +LFTRNHIS RDG LK RPVYA+DD+FI +E +TFPL + ARK CC
Sbjct: 282 DALRSFILKRPVMLFTRNHISDRDGNLKQRPVYAMDDLFIRLESKITFPLHVMARKIECC 341
Query: 221 IMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGY 400
IMYG ETIRGSNR I+++A +Y ++F++DWS +DQRLPRVITDI++TDFL +IVI+HGY
Sbjct: 342 IMYGYETIRGSNRQIDKLASNYKSYFTIDWSGFDQRLPRVITDIFWTDFLERMIVISHGY 401
Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
QPT++YP+YPDL K++ RM N+L FLHTWYNN+ ++ DG+AY RTC GVPSGL N
Sbjct: 402 QPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLVYVTADGFAYIRTCTGVPSGLLN 459
[6][TOP]
>UniRef100_Q9YX75 Putative RNA dependent RNA polymerase n=1 Tax=Fusarium poae virus 1
RepID=Q9YX75_9VIRU
Length = 673
Score = 233 bits (594), Expect = 8e-60
Identities = 105/173 (60%), Positives = 134/173 (77%)
Frame = +2
Query: 56 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
FF PT+LFTRNHIS RDG LK RPVYAVDD+F+ IE MLTFP + ARKP CCIMYGL
Sbjct: 284 FFLQRPTMLFTRNHISDRDGILKQRPVYAVDDLFLTIESMLTFPAHVIARKPECCIMYGL 343
Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
ETIRGSN+ +++IA DY +FF++DWS +DQRLP VI +++T+++ L+V+NHGY PTYE
Sbjct: 344 ETIRGSNQILDKIASDYKSFFTIDWSGFDQRLPWVIVKLFFTEYIPRLLVVNHGYAPTYE 403
Query: 416 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLYN 574
YP+YPDL + + R+ NL+ FL TWY NM F+ DG++Y R GVPSG+ N
Sbjct: 404 YPSYPDLTTNDMVSRLTNLITFLATWYFNMVFVTADGFSYVREHAGVPSGMLN 456
[7][TOP]
>UniRef100_B2L075 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Pleurotus ostreatus
virus 1 RepID=B2L075_9VIRU
Length = 185
Score = 211 bits (537), Expect = 3e-53
Identities = 91/142 (64%), Positives = 117/142 (82%)
Frame = +2
Query: 149 DIFIIIELMLTFPLTIQARKPSCCIMYGLETIRGSNRYIEQIARDYSTFFSLDWSSYDQR 328
D+FI +E M+TFPL + ARK CCIMYG ETIRGSNR I+++A +Y +FF++DWS +DQR
Sbjct: 1 DLFIRLESMITFPLHVMARKIECCIMYGYETIRGSNRQIDKLASNYKSFFTIDWSGFDQR 60
Query: 329 LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMT 508
LPRVITDI++TDFL +IVI+HGYQPT++YP+YPDL K++ RM N+L FLHTWYNN+
Sbjct: 61 LPRVITDIFWTDFLERMIVISHGYQPTFDYPSYPDLTPDKMFQRMSNILTFLHTWYNNLV 120
Query: 509 FLLPDGYAYRRTCCGVPSGLYN 574
++ DG+AY RTC GVPSGL N
Sbjct: 121 YVTADGFAYIRTCTGVPSGLLN 142
[8][TOP]
>UniRef100_Q9Q9X2 Putative RNA-dependent RNA polymerase n=1 Tax=Rhizoctonia solani
virus 717 RepID=Q9Q9X2_9VIRU
Length = 730
Score = 203 bits (516), Expect = 9e-51
Identities = 94/171 (54%), Positives = 125/171 (73%)
Frame = +2
Query: 56 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
F +PT++FTRNHISKRDG LKVRPVYAVD++F+ +E ML FP T+QARKP CCIMYGL
Sbjct: 315 FLKSFPTMMFTRNHISKRDGTLKVRPVYAVDELFLDLECMLAFPATVQARKPECCIMYGL 374
Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
ETIRGSN ++ +A+ + +F ++DWS YDQRLP I ++ +L SL++I+HGY PT E
Sbjct: 375 ETIRGSNIKLDSLAQGFISFATIDWSGYDQRLPWFIVRAFFFIYLPSLLIISHGYMPTSE 434
Query: 416 YPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGL 568
Y ++ ++ R NL++F TWY NM FL DG+A+RR GVPSG+
Sbjct: 435 YED-TSMNISDMFTRFFNLINFTATWYFNMVFLSADGFAFRRQFAGVPSGM 484
[9][TOP]
>UniRef100_Q85055 Atkinsonella hypoxylon virus segment 1 n=1 Tax=Atkinsonella
hypoxylon virus RepID=Q85055_AHV
Length = 665
Score = 148 bits (374), Expect = 3e-34
Identities = 82/194 (42%), Positives = 111/194 (57%), Gaps = 23/194 (11%)
Frame = +2
Query: 56 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
+F PT L R+HISKRD LKVRPVY I+I IE ML +PL QARK CCIMYGL
Sbjct: 249 WFKKVPTELLVRSHISKRDN-LKVRPVYNAPMIYIRIECMLFYPLLAQARKRDCCIMYGL 307
Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQP--- 406
ETIRG +E+I+ +++F +DWS +D P I++ ++ +L + I+I+HGY
Sbjct: 308 ETIRGGMNELERISNAFNSFLLIDWSRFDHLAPFTISNFFFKKWLPTKILIDHGYAQISN 367
Query: 407 --------------------TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDG 526
+ EY T P+ ++ NL+ FL WY +M F+ PDG
Sbjct: 368 YHDHVHSFSAQAQSHGIPMISKEYQTPPEAT--VFAKKVLNLISFLERWYRDMVFVTPDG 425
Query: 527 YAYRRTCCGVPSGL 568
+AYRRT GVPSG+
Sbjct: 426 FAYRRTHAGVPSGI 439
[10][TOP]
>UniRef100_Q5DM90 RNA-dependent RNA polymerase n=1 Tax=Ceratocystis resinifera virus
1 RepID=Q5DM90_9VIRU
Length = 663
Score = 144 bits (362), Expect = 6e-33
Identities = 77/192 (40%), Positives = 110/192 (57%), Gaps = 21/192 (10%)
Frame = +2
Query: 56 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311
Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
ETIRG IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371
Query: 416 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYA 532
Y + +L+E ++++NLL F++TW+ M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPETAIFANKVENLLKFINTWFKEMVYITPDGFA 431
Query: 533 YRRTCCGVPSGL 568
YRRT GVPSG+
Sbjct: 432 YRRTFAGVPSGI 443
[11][TOP]
>UniRef100_Q6EM35 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6EM35_9VIRU
Length = 663
Score = 142 bits (359), Expect = 1e-32
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 21/192 (10%)
Frame = +2
Query: 56 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYG
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGF 311
Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
ETIRG IE +A +S F +DWS +DQ +P + D++Y D++ +LI+I+ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILIDSGYAKIHN 371
Query: 416 YPTY----------------PDLDE-----HKLYHRMDNLLHFLHTWYNNMTFLLPDGYA 532
Y + +L+E ++++NLL F++TW+ M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGNSNLNEAPPEASVFANKVENLLKFINTWFKEMVYITPDGFA 431
Query: 533 YRRTCCGVPSGL 568
YRRT GVPSG+
Sbjct: 432 YRRTFAGVPSGI 443
[12][TOP]
>UniRef100_Q6X9T6 Putative RNA-dependent RNA polymerase n=1 Tax=Ceratocystis polonica
partitivirus RepID=Q6X9T6_9VIRU
Length = 663
Score = 141 bits (356), Expect = 3e-32
Identities = 76/192 (39%), Positives = 109/192 (56%), Gaps = 21/192 (10%)
Frame = +2
Query: 56 FFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGL 235
+F PT L R+HIS LKVRPV IF+ IE ML +PL Q RK C IMYGL
Sbjct: 253 WFKKIPTELLVRSHISNPK-KLKVRPVNNAPMIFLRIECMLFYPLLAQLRKQQCSIMYGL 311
Query: 236 ETIRGSNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYE 415
ETIRG IE +A +S F +DWS +DQ +P + D++Y D++ +LI+++ GY +
Sbjct: 312 ETIRGGMMEIESLATRFSNFMMIDWSKFDQTVPFTLVDMFYQDWIPTLILVDSGYAKIHN 371
Query: 416 YPTY----------------PDLDEHK-----LYHRMDNLLHFLHTWYNNMTFLLPDGYA 532
Y + +L+E ++++NLL F++TW+ M ++ PDG+A
Sbjct: 372 YNDHVHSFAAQARKLGVHGDSNLNEAPPEAAVFANKVENLLKFINTWFKEMVYITPDGFA 431
Query: 533 YRRTCCGVPSGL 568
Y RT GVPSG+
Sbjct: 432 YSRTFAGVPSGI 443
[13][TOP]
>UniRef100_Q8QY51 Putative RNA dependent RNA polymerase n=1 Tax=Heterobasidion
annosum P-type partitivirus RepID=Q8QY51_9VIRU
Length = 734
Score = 112 bits (279), Expect = 3e-23
Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 31/198 (15%)
Frame = +2
Query: 71 PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQARKPSCCIMYGLETIRG 250
PT+++ R+ ISK LKVRPVY +F+++E MLT L Q RKP CI++ ETIRG
Sbjct: 281 PTVMYVRSQISKIT-KLKVRPVYNAPMLFLMLEAMLTLGLMAQCRKPDNCILWSYETIRG 339
Query: 251 SNRYIEQIARDYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT--YEYPT 424
+ +I+ +++ F D+S +DQ P I ++ F+ +I ++ GYQ + Y
Sbjct: 340 GMHELHRISTEFNVFMGFDYSRFDQLAPFTIIYHFWATFIPMIIRVDRGYQQSTIYTKDQ 399
Query: 425 YPDLDEHKLYHRMD-----------------------------NLLHFLHTWYNNMTFLL 517
Y D K Y +D N+L F+ WY M F+
Sbjct: 400 YA-YDFEKKYDNLDKSEPKFQEFAKKSNNLFPKHVVAFSFVIFNILSFIWWWYVFMVFIT 458
Query: 518 PDGYAYRRTCCGVPSGLY 571
PDGY Y R GVPSG++
Sbjct: 459 PDGYGYVRLLAGVPSGIF 476
[14][TOP]
>UniRef100_A7REC6 Putative RdRp n=1 Tax=Vicia faba partitivirus 1 RepID=A7REC6_9VIRU
Length = 576
Score = 83.2 bits (204), Expect = 1e-14
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 6/174 (3%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQ--ARKPSCCIMYGLET 241
Y F R H+ + D P KVR V+ ++ ELM +PL + AR P +++G ET
Sbjct: 202 YWNTAFARQHLVEDDDPDKVRLVFGAPSTLLMAELMFIWPLQVSLLARGPQSPMLWGYET 261
Query: 242 IRGSNRYIEQIARD----YSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPT 409
+ G + A D YST +LDWS +D+ + + +R + GY PT
Sbjct: 262 LTGGWSRLFSWASDTMPRYSTVLTLDWSRFDKDARHTVIRDIHAMIMRPMFTFTEGYHPT 321
Query: 410 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
YP PD + R++NL +++ + +LPDG + G+ SG +
Sbjct: 322 ISYPNAPDTNP----DRLENLWNWMTDAILTVPLMLPDGQLLQFNHSGIYSGYF 371
[15][TOP]
>UniRef100_B2CGP3 Putative RNA-dependent RNA polymerase n=1 Tax=Beet cryptic virus 1
RepID=B2CGP3_9VIRU
Length = 616
Score = 76.3 bits (186), Expect = 2e-12
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 230 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 289
Query: 242 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 400
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 290 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 344
Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLY 571
PT+ PT+P D K R++ L +L T N +LPDG YRR G+PSGL+
Sbjct: 345 VPTHSAPTHPQWDHTKAI-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLF 400
[16][TOP]
>UniRef100_D0EP81 Putative truncated RNA-dependent RNA polymerase n=1 Tax=Beet
cryptic virus 1 RepID=D0EP81_9VIRU
Length = 559
Score = 75.9 bits (185), Expect = 2e-12
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
+P LL T+ I K+D P K+R ++ +II E ML + + PS +++G ET
Sbjct: 174 FPMLLHTKTAIVKQDDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPSVTPMLWGYET 233
Query: 242 IRGSNRYIEQIARDY------STFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 400
G ++ RD +F +LDWS +D+R ++ I YT R+ + + GY
Sbjct: 234 FTGG---WFRLNRDLFCGFLQRSFLTLDWSRFDKRAYFPLLRRILYT--ARTFLTFDEGY 288
Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
PT+ PT+P D K L L + +LPDG YRR G+PSGL+
Sbjct: 289 VPTHSAPTHPQWDHTKAIRHERLWLWTLENLFE-APIILPDGRMYRRHFAGIPSGLF 344
[17][TOP]
>UniRef100_Q4KUU4 Putative RNA dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=Q4KUU4_9VIRU
Length = 616
Score = 75.1 bits (183), Expect = 4e-12
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Frame = +2
Query: 5 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
I YT ++S + GY PT+ P +P ++ K + L L W F +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381
Query: 515 LPDGYAYRRTCCGVPSGLY 571
LPDG YRR G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400
[18][TOP]
>UniRef100_B2M1T3 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=B2M1T3_9VIRU
Length = 616
Score = 75.1 bits (183), Expect = 4e-12
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Frame = +2
Query: 5 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
I YT ++S + GY PT+ P +P ++ K + L L W F +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381
Query: 515 LPDGYAYRRTCCGVPSGLY 571
LPDG YRR G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400
[19][TOP]
>UniRef100_A3R744 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R744_9VIRU
Length = 616
Score = 75.1 bits (183), Expect = 4e-12
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Frame = +2
Query: 5 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
I YT ++S + GY PT+ P +P ++ K + L L W F +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381
Query: 515 LPDGYAYRRTCCGVPSGLY 571
LPDG YRR G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400
[20][TOP]
>UniRef100_A3R742 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R742_9VIRU
Length = 616
Score = 75.1 bits (183), Expect = 4e-12
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Frame = +2
Query: 5 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
I YT ++S + GY PT+ P +P ++ K + L L W F +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381
Query: 515 LPDGYAYRRTCCGVPSGLY 571
LPDG YRR G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400
[21][TOP]
>UniRef100_A3R739 Putative RNA-dependent RNA polymerase n=1 Tax=Vicia cryptic virus
RepID=A3R739_9VIRU
Length = 616
Score = 75.1 bits (183), Expect = 4e-12
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 10/199 (5%)
Frame = +2
Query: 5 TELTDSDVQKYIDEANSFFNDYPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELML-- 178
T+ T D Y+ N F +P LL T+ I K+D P K+R ++ +II + M
Sbjct: 213 TDTTGLDNNGYL--YNRFI--FPMLLHTKTAIVKKDDPNKMRTIWGASKPWIIADTMFYW 268
Query: 179 TFPLTIQARKPSCCIMYGLETIRGSNRYIEQI---ARDYSTFFSLDWSSYDQRLP-RVIT 346
+ ++ S +++G ET G + Q+ +F +LDWS +D+R ++
Sbjct: 269 EYQAWVKHNPGSTPMLWGFETFTGGWFRLNQLLFCGLIRRSFITLDWSRFDKRAYFPLLR 328
Query: 347 DIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTF----L 514
I YT ++S + GY PT+ P +P ++ K + L L W F +
Sbjct: 329 KIMYT--VKSFLTFEEGYVPTHAAPNHPQWNQDKT-----DKLERLWLWTLENLFEAPII 381
Query: 515 LPDGYAYRRTCCGVPSGLY 571
LPDG YRR G+PSGL+
Sbjct: 382 LPDGRMYRRHFAGIPSGLF 400
[22][TOP]
>UniRef100_Q64FP0 RNA dependent RNA polymerase n=1 Tax=White clover cryptic virus 1
RepID=Q64FP0_WCCV1
Length = 616
Score = 73.6 bits (179), Expect = 1e-11
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Frame = +2
Query: 38 IDEANSFFNDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQAR 205
+++ FFN + P LL T+ I K++ P K+R ++ +II E M + I+
Sbjct: 218 LEQTGYFFNRFIFPMLLHTKTAIVKKNDPNKMRTIWGASKPWIIAETMFYWEYLAWIKHN 277
Query: 206 KPSCCIMYGLETIRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTD 364
+ +++G ET G + I R +F +LDWS +D+R ++ I YT
Sbjct: 278 PGATPMLWGYETFTGGWFRLNHELFCGLIQR---SFLTLDWSRFDKRAYFPLLRRILYT- 333
Query: 365 FLRSLIVINHGYQPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYR 538
+++ + GY PT+ PT+P + + R++ L +L T N +LPDG YR
Sbjct: 334 -VKTFLTFEEGYVPTHAAPTHPQWSQENI-DRLERL--WLWTLENLFEAPIILPDGRMYR 389
Query: 539 RTCCGVPSGLY 571
R G+PSGL+
Sbjct: 390 RHFAGIPSGLF 400
[23][TOP]
>UniRef100_B8YNW9 RNA-dependent RNA polymerase n=1 Tax=Carrot cryptic virus
RepID=B8YNW9_9VIRU
Length = 616
Score = 70.5 bits (171), Expect = 9e-11
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 241
+P LL T+ I K + P K+R ++ +II E ML + I+ + +++G ET
Sbjct: 230 FPMLLHTKTAIVKHNDPNKMRTIWGASKPWIIAETMLYWEYIAWIKLNPGTTPMLWGYET 289
Query: 242 IRGS------NRYIEQIARDYSTFFSLDWSSYDQRLP-RVITDIYYTDFLRSLIVINHGY 400
G Y I +F +LDWS +D+R ++ I Y +RS + + GY
Sbjct: 290 FTGGWFRLNHQLYCGMIKH---SFLTLDWSRFDKRAYFPLLRRILYP--VRSFLTFDEGY 344
Query: 401 QPTYEYPTYPDLDEHKLYHRMDNLLHFLHTWYN--NMTFLLPDGYAYRRTCCGVPSGLY 571
PT+ P +P + K R++ L +L T N +LPDG YRR G+PSGL+
Sbjct: 345 VPTHAAPYHPQWNHEKAL-RLERL--WLWTLENLFEAPIILPDGRMYRRHFAGIPSGLF 400
[24][TOP]
>UniRef100_C0STM0 RNA-dependent RNA polymerase n=1 Tax=Flammulina velutipes browning
virus RepID=C0STM0_9VIRU
Length = 580
Score = 68.2 bits (165), Expect = 4e-10
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCCIMYGLETI 244
YP + T++ I P KVR ++ V + +++E M +PL R + +++G ET+
Sbjct: 199 YPINIHTKSAIIGIHDPNKVRTIFGVPKLTVMVEAMFFWPLFRYYRFEQQSPLLWGYETM 258
Query: 245 RGS----NRYIEQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 409
G N + + SLDWS +D R L VI D+Y ++S N+GY PT
Sbjct: 259 LGGWYKLNHELHLNPFYQGSILSLDWSFFDGRALFSVINDLYSDKGVKSYFEFNNGYIPT 318
Query: 410 YEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
+ YPD H ++ NL ++ T L DG ++RT G+ SG +
Sbjct: 319 VD---YPDSSTHP--QKLHNLWDWMLTALKFAPCALADGTIWQRTVRGIASGQF 367
[25][TOP]
>UniRef100_Q65A75 RNA-dependent RNA polymerase n=1 Tax=Amasya cherry
disease-associated mycovirus RepID=Q65A75_9VIRU
Length = 621
Score = 67.0 bits (162), Expect = 1e-09
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
+P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291
Query: 242 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 412
G R + Y ++ +LDW +D++ I D + D + + + ++GY PT
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350
Query: 413 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
+YP + R+ L + + + +LP+G+ Y R G+PSGL+
Sbjct: 351 DYPDTKSTWTQERSTRLKRLFDWTKENFYHAPIVLPNGHMYVRKFAGIPSGLF 403
[26][TOP]
>UniRef100_Q65A70 RNA-dependent RNA polymerase n=1 Tax=Cherry chlorotic rusty spot
associated partitivirus RepID=Q65A70_9VIRU
Length = 621
Score = 65.5 bits (158), Expect = 3e-09
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLTIQAR-KPSCC-IMYGLET 241
+P LL T+ I K+D P K+R ++ +II + ML + A+ +P +++ ET
Sbjct: 232 FPMLLHTKTAIVKKDDPNKMRTIWGCSKPWIIADTMLWWEYVAYAKLQPGATPMLWSYET 291
Query: 242 IRGS-NRYIEQIARDY--STFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTY 412
G R + Y ++ +LDW +D++ I D + D + + + ++GY PT
Sbjct: 292 FTGGWLRLNHALFSSYIRHSYITLDWKRFDKKAYFCIIDKIF-DGVETFLDFDNGYLPTK 350
Query: 413 EYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
+YP R+ L + + + +LP+G+ Y R G+PSGL+
Sbjct: 351 DYPDTKSTWTQGRSTRIKRLFDWTKENFYHAPIVLPNGHMYVRQFAGIPSGLF 403
[27][TOP]
>UniRef100_Q7TDZ9 RNA-dependent RNA polymerase n=1 Tax=Oyster mushroom isometric
virus II RepID=Q7TDZ9_9VIRU
Length = 610
Score = 62.4 bits (150), Expect = 2e-08
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Frame = +2
Query: 68 YPTLLFTRNHI-SKRDGPL---KVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMY 229
Y F R HI K+ G L KVR V+ + EL+ +PL + + +++
Sbjct: 237 YWNTAFARQHIVEKKPGILAQPKVRLVFGAPFTLLTAELIFIWPLQTHLLLMQDFSPMLW 296
Query: 230 GLETIRGS-NRYIEQIARDYST---FFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHG 397
G ETI G R ++ T +LDWS +D+ + +T +R +G
Sbjct: 297 GYETILGGWYRLRGHLSGKIDTDKLVATLDWSGFDRYARHTVIKDIHTKVMRPCFDFTNG 356
Query: 398 YQPTYEYP--TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSG 565
Y PT+ YP T D DE + R++NL +++ + L+PDG R T G+ SG
Sbjct: 357 YHPTHRYPISTDVDADEQPVSTRLENLWNWMTDAVLTVPLLMPDGTMIRFTHSGIYSG 414
[28][TOP]
>UniRef100_Q91T12 Putative RNA-dependent RNA polymerase (Fragment) n=1
Tax=Heterobasidion annosum virus RepID=Q91T12_9VIRU
Length = 367
Score = 61.6 bits (148), Expect = 4e-08
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT--IQARKPSCCIMYGLET 241
+P LL + + K D P K+R ++ V ++II E + + I+ +++G ET
Sbjct: 1 FPMLLHIKTAVVKFDAPNKLRTIWGVSKLWIISEAQIYWEYIAWIKLNPGITPMLWGYET 60
Query: 242 IRGSNRYIEQIAR---DYSTFFSLDWSSYDQRLPR-VITDIYYTDFLRSLIVINHGYQPT 409
G + + + T+ ++DWS +D+R +I I+ R +GY PT
Sbjct: 61 FTGGWFRLYRTLHTPGENVTYITIDWSRFDKRAYFWLIRKIFIRT--RQFFDFENGYTPT 118
Query: 410 YEYP---TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
+YP T+PD ++ L + + + +LP+G+ Y+R G+PSGL+
Sbjct: 119 KDYPFSPTHPD--------KLQALWEWTIEAFFDSPIVLPNGHVYKRRFAGIPSGLF 167
[29][TOP]
>UniRef100_Q52UL1 RNA-dependent RNA polymerase n=1 Tax=Raphanus sativus cryptic virus
1 RepID=Q52UL1_9VIRU
Length = 573
Score = 59.7 bits (143), Expect = 2e-07
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Frame = +2
Query: 116 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 280
P K+R V+ V I E M +PL + +++ ET+ G N Q +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFFWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255
Query: 281 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 460
+ T F+LDWS +D R+ + D D ++S Y PT YPT + R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTYPTCRTNPQ-----R 309
Query: 461 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
+ NL +++ T Y + G YRR G+PSG++
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIF 346
[30][TOP]
>UniRef100_C7ENF4 RNA-dependent RNA polymerase n=1 Tax=Sclerotinia sclerotiorum
partitivirus S RepID=C7ENF4_9VIRU
Length = 580
Score = 58.5 bits (140), Expect = 3e-07
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Frame = +2
Query: 68 YPTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLE 238
Y T L R H+ + K+R V+ V + ++ E M +PL + +++G E
Sbjct: 191 YHTTLHARAHVVGHEDADKIRAVFGVPKLLLMAENMFIWPLQAYYLNQDTTKHHLLWGNE 250
Query: 239 TIRGSNRYI---EQIARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQP 406
++G + + Q R T SLDWS +D+R L VI D++ +S H Y+P
Sbjct: 251 IMKGGWKKLWGQLQNGRISRTILSLDWSEFDKRALHEVIDDVH--SMWKSWFDFTH-YEP 307
Query: 407 TYEYPTYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSG 565
T Y + H+ R++NL ++ + L PDG Y+ T G+ SG
Sbjct: 308 TIFYEKGEIPEPHR---RIENLWIWMTDMVKHYPILQPDGKVYQWTRNGIASG 357
[31][TOP]
>UniRef100_B7ZGY8 RNA-dependent RNA polymerase n=1 Tax=Chondrostereum purpureum
cryptic virus 1 RepID=B7ZGY8_9VIRU
Length = 587
Score = 57.8 bits (138), Expect = 6e-07
Identities = 56/182 (30%), Positives = 78/182 (42%), Gaps = 12/182 (6%)
Frame = +2
Query: 62 NDY--PTLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT----IQARKPSCCI 223
+DY P R+ I P KVR VY + I + M +PL I + P +
Sbjct: 200 DDYLTPMRSHARSAIQPISDPNKVRFVYGYPKVGIFPQAMFFWPLFVYYHITGQSP---L 256
Query: 224 MYGLETIRGS----NRYIEQIARDYSTFFSLDWSSYD-QRLPRVITDIYYTDFLRSLIVI 388
++G ET+ G N + + LDW +D L V DI + S
Sbjct: 257 LWGYETMTGGWYRLNHELRSTPGISGSILELDWQGFDIHALFEVFDDIKNLSW--SFFDC 314
Query: 389 NHGYQPTYEYP-TYPDLDEHKLYHRMDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSG 565
+HGYQPT +Y T D D R+ NL ++ LPDG +RR+ GVPSG
Sbjct: 315 SHGYQPTKDYQGTSCDPD------RLKNLWEWIWFSIKYTPIRLPDGRLFRRSWRGVPSG 368
Query: 566 LY 571
L+
Sbjct: 369 LF 370
[32][TOP]
>UniRef100_Q5XM56 RNA-dependent RNA polymerase n=1 Tax=Radish partitivirus JC-2004
RepID=Q5XM56_9VIRU
Length = 573
Score = 57.4 bits (137), Expect = 8e-07
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 5/157 (3%)
Frame = +2
Query: 116 PLKVRPVYAVDDIFIIIELMLTFPL-TIQARKPSCCIMYGLETIRGS----NRYIEQIAR 280
P K+R V+ V I E M ++PL + +++ ET+ G N Q +
Sbjct: 196 PPKIRTVFGVPKSLIFAEAMFSWPLFSDYFTNSETPLLWNYETLNGGWYRLNDEFYQQWQ 255
Query: 281 DYSTFFSLDWSSYDQRLPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 460
+ T F+LDWS +D R+ + D D ++S Y PT PT + R
Sbjct: 256 SFCTIFNLDWSEFDMRVYFSMLDDC-RDAVKSYFCFCGNYCPTRTNPTCRTNPQ-----R 309
Query: 461 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
+ NL +++ T Y + G YRR G+PSG++
Sbjct: 310 LQNLWNWIGTAYKDTPCTTTTGKVYRRRFAGMPSGIF 346
[33][TOP]
>UniRef100_A2VA07 RNA-dependent RNA polymerase (Fragment) n=1 Tax=Ophiostoma quercus
partitivirus RepID=A2VA07_9VIRU
Length = 132
Score = 56.2 bits (134), Expect = 2e-06
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
Frame = +2
Query: 74 TLLFTRNHISKRDGPLKVRPVYAVDDIFIIIELMLTFPLT---IQARKPSCCIMYGLETI 244
T L +R+H+ + D P K+R V+ V + +++E M + + + +++G ETI
Sbjct: 8 TYLHSRSHMVQSDKPDKIRAVFGVPKLLLMVENMFIWNIQKDYLNGPLGKSPLLWGFETI 67
Query: 245 RGS-NRYIEQI-ARDYSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPT 409
RG + I Q+ ++ S+ S DWS +D + L VI D++ D +S N GY+P+
Sbjct: 68 RGGWMKLISQLTSKPLSSIISADWSGFDHKALHEVIDDVH--DIWKSWFDFNQGYEPS 123
[34][TOP]
>UniRef100_Q8B0U3 RNA-dependent RNA polymerase n=1 Tax=Helicobasidium mompa dsRNA
mycovirus RepID=Q8B0U3_9VIRU
Length = 598
Score = 54.3 bits (129), Expect = 7e-06
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Frame = +2
Query: 122 KVRPVYAVDDIFIIIELMLTFPLTI--QARKPSCCIMYGLETIRGS--NRYIEQIARD-- 283
K+R V+ V ++ M +PL + + +++G ETI G N Y+E I
Sbjct: 224 KIRVVFGVSKRHVLPSAMFFWPLFFFYLKNRETSPLLWGNETILGGGLNLYMECIIPRLY 283
Query: 284 YSTFFSLDWSSYDQR-LPRVITDIYYTDFLRSLIVINHGYQPTYEYPTYPDLDEHKLYHR 460
+STF +DWSS+D R L +I + ++ R+ +GY PT +Y H
Sbjct: 284 FSTFVMVDWSSFDLRSLFSIIRQDIFPNW-RTYFDFENGYIPTNKYRESKADPAH----- 337
Query: 461 MDNLLHFLHTWYNNMTFLLPDGYAYRRTCCGVPSGLY 571
++ L +++ M LPDG Y+R G+PSGL+
Sbjct: 338 LEALWNWVCEACFQMPHRLPDGNVYKRLFRGIPSGLF 374